data_3LLU # _entry.id 3LLU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LLU pdb_00003llu 10.2210/pdb3llu/pdb RCSB RCSB057436 ? ? WWPDB D_1000057436 ? ? # _pdbx_database_status.entry_id 3LLU _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-01-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nedyalkova, L.' 1 'Tempel, W.' 2 'Tong, Y.' 3 'Crombet, L.' 4 'Zhong, N.' 5 'Guan, X.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.M.' 8 'Bountra, C.' 9 'Weigelt, J.' 10 'Bochkarev, A.' 11 'Park, H.' 12 'Structural Genomics Consortium (SGC)' 13 # _citation.id primary _citation.title 'Crystal structure of the nucleotide-binding domain of Ras-related GTP-binding protein C' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nedyalkova, L.' 1 ? primary 'Tempel, W.' 2 ? primary 'Tong, Y.' 3 ? primary 'Crombet, L.' 4 ? primary 'Zhong, N.' 5 ? primary 'Guan, X.' 6 ? primary 'Arrowsmith, C.H.' 7 ? primary 'Edwards, A.M.' 8 ? primary 'Bountra, C.' 9 ? primary 'Weigelt, J.' 10 ? primary 'Bochkarev, A.' 11 ? primary 'Park, H.' 12 ? # _cell.entry_id 3LLU _cell.length_a 72.220 _cell.length_b 72.220 _cell.length_c 72.182 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LLU _symmetry.space_group_name_H-M 'I 4' _symmetry.Int_Tables_number 79 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related GTP-binding protein C' 22895.889 1 ? ? ? ? 2 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 9 ? ? ? ? 5 water nat water 18.015 85 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Rag C, RagC, GTPase-interacting protein 2, TIB929' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGRENLYFQGSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQM DFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRAND DLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLI ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGRENLYFQGSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQM DFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRAND DLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 ARG n 1 12 GLU n 1 13 ASN n 1 14 LEU n 1 15 TYR n 1 16 PHE n 1 17 GLN n 1 18 GLY n 1 19 SER n 1 20 LYS n 1 21 PRO n 1 22 ARG n 1 23 ILE n 1 24 LEU n 1 25 LEU n 1 26 MET n 1 27 GLY n 1 28 LEU n 1 29 ARG n 1 30 ARG n 1 31 SER n 1 32 GLY n 1 33 LYS n 1 34 SER n 1 35 SER n 1 36 ILE n 1 37 GLN n 1 38 LYS n 1 39 VAL n 1 40 VAL n 1 41 PHE n 1 42 HIS n 1 43 LYS n 1 44 MET n 1 45 SER n 1 46 PRO n 1 47 ASN n 1 48 GLU n 1 49 THR n 1 50 LEU n 1 51 PHE n 1 52 LEU n 1 53 GLU n 1 54 SER n 1 55 THR n 1 56 ASN n 1 57 LYS n 1 58 ILE n 1 59 TYR n 1 60 LYS n 1 61 ASP n 1 62 ASP n 1 63 ILE n 1 64 SER n 1 65 ASN n 1 66 SER n 1 67 SER n 1 68 PHE n 1 69 VAL n 1 70 ASN n 1 71 PHE n 1 72 GLN n 1 73 ILE n 1 74 TRP n 1 75 ASP n 1 76 PHE n 1 77 PRO n 1 78 GLY n 1 79 GLN n 1 80 MET n 1 81 ASP n 1 82 PHE n 1 83 PHE n 1 84 ASP n 1 85 PRO n 1 86 THR n 1 87 PHE n 1 88 ASP n 1 89 TYR n 1 90 GLU n 1 91 MET n 1 92 ILE n 1 93 PHE n 1 94 ARG n 1 95 GLY n 1 96 THR n 1 97 GLY n 1 98 ALA n 1 99 LEU n 1 100 ILE n 1 101 TYR n 1 102 VAL n 1 103 ILE n 1 104 ASP n 1 105 ALA n 1 106 GLN n 1 107 ASP n 1 108 ASP n 1 109 TYR n 1 110 MET n 1 111 GLU n 1 112 ALA n 1 113 LEU n 1 114 THR n 1 115 ARG n 1 116 LEU n 1 117 HIS n 1 118 ILE n 1 119 THR n 1 120 VAL n 1 121 SER n 1 122 LYS n 1 123 ALA n 1 124 TYR n 1 125 LYS n 1 126 VAL n 1 127 ASN n 1 128 PRO n 1 129 ASP n 1 130 MET n 1 131 ASN n 1 132 PHE n 1 133 GLU n 1 134 VAL n 1 135 PHE n 1 136 ILE n 1 137 HIS n 1 138 LYS n 1 139 VAL n 1 140 ASP n 1 141 GLY n 1 142 LEU n 1 143 SER n 1 144 ASP n 1 145 ASP n 1 146 HIS n 1 147 LYS n 1 148 ILE n 1 149 GLU n 1 150 THR n 1 151 GLN n 1 152 ARG n 1 153 ASP n 1 154 ILE n 1 155 HIS n 1 156 GLN n 1 157 ARG n 1 158 ALA n 1 159 ASN n 1 160 ASP n 1 161 ASP n 1 162 LEU n 1 163 ALA n 1 164 ASP n 1 165 ALA n 1 166 GLY n 1 167 LEU n 1 168 GLU n 1 169 LYS n 1 170 LEU n 1 171 HIS n 1 172 LEU n 1 173 SER n 1 174 PHE n 1 175 TYR n 1 176 LEU n 1 177 THR n 1 178 SER n 1 179 ILE n 1 180 TYR n 1 181 ASP n 1 182 HIS n 1 183 SER n 1 184 ILE n 1 185 PHE n 1 186 GLU n 1 187 ALA n 1 188 PHE n 1 189 SER n 1 190 LYS n 1 191 VAL n 1 192 VAL n 1 193 GLN n 1 194 LYS n 1 195 LEU n 1 196 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene RRAGC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-V2R-pRARE2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RRAGC_HUMAN _struct_ref.pdbx_db_accession Q9HB90 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGA LIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTS IYDHSIFEAFSKVVQKLI ; _struct_ref.pdbx_align_begin 60 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LLU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 19 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 196 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9HB90 _struct_ref_seq.db_align_beg 60 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 237 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 60 _struct_ref_seq.pdbx_auth_seq_align_end 237 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LLU MET A 1 ? UNP Q9HB90 ? ? 'expression tag' 42 1 1 3LLU HIS A 2 ? UNP Q9HB90 ? ? 'expression tag' 43 2 1 3LLU HIS A 3 ? UNP Q9HB90 ? ? 'expression tag' 44 3 1 3LLU HIS A 4 ? UNP Q9HB90 ? ? 'expression tag' 45 4 1 3LLU HIS A 5 ? UNP Q9HB90 ? ? 'expression tag' 46 5 1 3LLU HIS A 6 ? UNP Q9HB90 ? ? 'expression tag' 47 6 1 3LLU HIS A 7 ? UNP Q9HB90 ? ? 'expression tag' 48 7 1 3LLU SER A 8 ? UNP Q9HB90 ? ? 'expression tag' 49 8 1 3LLU SER A 9 ? UNP Q9HB90 ? ? 'expression tag' 50 9 1 3LLU GLY A 10 ? UNP Q9HB90 ? ? 'expression tag' 51 10 1 3LLU ARG A 11 ? UNP Q9HB90 ? ? 'expression tag' 52 11 1 3LLU GLU A 12 ? UNP Q9HB90 ? ? 'expression tag' 53 12 1 3LLU ASN A 13 ? UNP Q9HB90 ? ? 'expression tag' 54 13 1 3LLU LEU A 14 ? UNP Q9HB90 ? ? 'expression tag' 55 14 1 3LLU TYR A 15 ? UNP Q9HB90 ? ? 'expression tag' 56 15 1 3LLU PHE A 16 ? UNP Q9HB90 ? ? 'expression tag' 57 16 1 3LLU GLN A 17 ? UNP Q9HB90 ? ? 'expression tag' 58 17 1 3LLU GLY A 18 ? UNP Q9HB90 ? ? 'expression tag' 59 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3LLU _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 40.16 _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details ;2.0M ammonium sulfate, 0.2M sodium chloride, 0.1M HEPES. 1:100 (w/w) papain and GMPPNP were also added. Please note: mass spectral analysis of TEV protease digest prior to crystallization suggested that removal of the His-tag was incomplete even after 2 days. However, without TEV protease treatment no crystals were obtained using otherwise identical crystallization conditions. Also note the presence of papain in the crystallization drop., pH 7.5, vapor diffusion, sitting drop, temperature 291K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC Q315' _diffrn_detector.pdbx_collection_date 2009-12-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.97934 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3LLU _reflns.d_resolution_high 1.400 _reflns.d_resolution_low 25.000 _reflns.number_obs 36466 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_netI_over_sigmaI 12.500 _reflns.pdbx_chi_squared 1.519 _reflns.pdbx_redundancy 7.300 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.40 1.42 ? ? ? 0.816 ? ? 1.996 7.20 ? 1835 100.00 ? 1 1.42 1.45 ? ? ? 0.705 ? ? 2.023 7.20 ? 1787 100.00 ? 2 1.45 1.48 ? ? ? 0.589 ? ? 1.788 7.30 ? 1836 100.00 ? 3 1.48 1.51 ? ? ? 0.502 ? ? 1.785 7.30 ? 1781 100.00 ? 4 1.51 1.54 ? ? ? 0.417 ? ? 1.589 7.30 ? 1819 100.00 ? 5 1.54 1.58 ? ? ? 0.333 ? ? 1.515 7.30 ? 1841 100.00 ? 6 1.58 1.62 ? ? ? 0.275 ? ? 1.462 7.30 ? 1804 100.00 ? 7 1.62 1.66 ? ? ? 0.237 ? ? 1.396 7.30 ? 1807 100.00 ? 8 1.66 1.71 ? ? ? 0.200 ? ? 1.383 7.40 ? 1826 100.00 ? 9 1.71 1.76 ? ? ? 0.160 ? ? 1.336 7.40 ? 1825 100.00 ? 10 1.76 1.83 ? ? ? 0.123 ? ? 1.337 7.40 ? 1824 100.00 ? 11 1.83 1.90 ? ? ? 0.097 ? ? 1.302 7.40 ? 1865 100.00 ? 12 1.90 1.99 ? ? ? 0.076 ? ? 1.324 7.40 ? 1760 100.00 ? 13 1.99 2.09 ? ? ? 0.061 ? ? 1.338 7.40 ? 1844 100.00 ? 14 2.09 2.22 ? ? ? 0.057 ? ? 1.536 7.40 ? 1841 100.00 ? 15 2.22 2.39 ? ? ? 0.054 ? ? 1.766 7.40 ? 1811 100.00 ? 16 2.39 2.63 ? ? ? 0.046 ? ? 1.581 7.30 ? 1821 100.00 ? 17 2.63 3.01 ? ? ? 0.033 ? ? 1.137 7.00 ? 1842 100.00 ? 18 3.01 3.80 ? ? ? 0.028 ? ? 1.177 7.40 ? 1827 100.00 ? 19 3.80 25.00 ? ? ? 0.032 ? ? 1.630 7.40 ? 1870 99.30 ? 20 # _refine.entry_id 3LLU _refine.ls_d_res_high 1.400 _refine.ls_d_res_low 22.840 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.956 _refine.ls_number_reflns_obs 36436 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED. ARP/WARP, COOT and the MOLPROBITY server were also used during refinement. ; _refine.ls_R_factor_obs 0.155 _refine.ls_R_factor_R_work 0.154 _refine.ls_wR_factor_R_work 0.155 _refine.ls_R_factor_R_free 0.181 _refine.ls_wR_factor_R_free 0.182 _refine.ls_percent_reflns_R_free 4.970 _refine.ls_number_reflns_R_free 1811 _refine.B_iso_mean 14.630 _refine.aniso_B[1][1] -0.282 _refine.aniso_B[2][2] -0.282 _refine.aniso_B[3][3] 0.563 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.963 _refine.pdbx_overall_ESU_R 0.063 _refine.pdbx_overall_ESU_R_Free 0.056 _refine.overall_SU_ML 0.030 _refine.overall_SU_B 1.644 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB entry 2Q3F' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1516 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 85 _refine_hist.number_atoms_total 1643 _refine_hist.d_res_high 1.400 _refine_hist.d_res_low 22.840 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1600 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1066 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2188 1.515 1.963 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2607 0.941 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 201 5.517 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 81 33.240 24.444 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 275 11.149 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 7.143 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 234 0.100 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1789 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 340 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 931 1.263 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 373 0.407 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1520 1.918 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 669 3.197 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 657 4.536 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2666 1.169 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 20 1.436 1.400 2654 100.000 2532 0.183 122 0.209 . . . . . 'X-RAY DIFFRACTION' 20 1.475 1.436 2607 99.962 2470 0.154 136 0.204 . . . . . 'X-RAY DIFFRACTION' 20 1.518 1.475 2562 99.961 2435 0.146 126 0.197 . . . . . 'X-RAY DIFFRACTION' 20 1.565 1.518 2463 100.000 2336 0.125 127 0.162 . . . . . 'X-RAY DIFFRACTION' 20 1.616 1.565 2384 100.000 2279 0.122 105 0.181 . . . . . 'X-RAY DIFFRACTION' 20 1.672 1.616 2323 100.000 2209 0.122 114 0.155 . . . . . 'X-RAY DIFFRACTION' 20 1.735 1.672 2265 99.956 2164 0.123 100 0.162 . . . . . 'X-RAY DIFFRACTION' 20 1.805 1.735 2124 100.000 2008 0.128 116 0.169 . . . . . 'X-RAY DIFFRACTION' 20 1.885 1.805 2028 100.000 1921 0.130 107 0.165 . . . . . 'X-RAY DIFFRACTION' 20 1.976 1.885 1974 100.000 1868 0.139 106 0.171 . . . . . 'X-RAY DIFFRACTION' 20 2.082 1.976 1921 100.000 1812 0.136 109 0.173 . . . . . 'X-RAY DIFFRACTION' 20 2.207 2.082 1765 100.000 1677 0.131 88 0.156 . . . . . 'X-RAY DIFFRACTION' 20 2.358 2.207 1662 100.000 1574 0.141 88 0.178 . . . . . 'X-RAY DIFFRACTION' 20 2.545 2.358 1593 100.000 1506 0.155 87 0.190 . . . . . 'X-RAY DIFFRACTION' 20 2.784 2.545 1438 100.000 1380 0.157 58 0.199 . . . . . 'X-RAY DIFFRACTION' 20 3.107 2.784 1305 100.000 1237 0.169 68 0.175 . . . . . 'X-RAY DIFFRACTION' 20 3.577 3.107 1142 100.000 1099 0.171 43 0.161 . . . . . 'X-RAY DIFFRACTION' 20 4.354 3.577 991 99.899 935 0.161 55 0.173 . . . . . 'X-RAY DIFFRACTION' 20 6.049 4.354 784 100.000 747 0.177 37 0.214 . . . . . 'X-RAY DIFFRACTION' 20 22.840 6.049 467 97.430 436 0.238 19 0.264 . . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3LLU _struct.title 'Crystal structure of the nucleotide-binding domain of Ras-related GTP-binding protein C' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LLU _struct_keywords.text 'Structural Genomics Consortium, SGC, Cytoplasm, GTP-binding, Nucleotide-binding, Nucleus, Phosphoprotein, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 32 ? HIS A 42 ? GLY A 73 HIS A 83 1 ? 11 HELX_P HELX_P2 2 SER A 45 ? LEU A 52 ? SER A 86 LEU A 93 5 ? 8 HELX_P HELX_P3 3 ASP A 88 ? GLY A 95 ? ASP A 129 GLY A 136 1 ? 8 HELX_P HELX_P4 4 TYR A 109 ? ASN A 127 ? TYR A 150 ASN A 168 1 ? 19 HELX_P HELX_P5 5 VAL A 139 ? LEU A 142 ? VAL A 180 LEU A 183 5 ? 4 HELX_P HELX_P6 6 SER A 143 ? ALA A 165 ? SER A 184 ALA A 206 1 ? 23 HELX_P HELX_P7 7 HIS A 182 ? LEU A 195 ? HIS A 223 LEU A 236 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? M HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 41 A MG 502 1_555 ? ? ? ? ? ? ? 2.138 ? ? metalc2 metalc ? ? A SER 34 OG ? ? ? 1_555 C MG . MG ? ? A SER 75 A MG 502 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc3 metalc ? ? A THR 55 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 96 A MG 502 1_555 ? ? ? ? ? ? ? 2.114 ? ? metalc4 metalc ? ? M HOH . O ? ? ? 1_555 C MG . MG ? ? A HOH 243 A MG 502 1_555 ? ? ? ? ? ? ? 2.046 ? ? metalc5 metalc ? ? B GNP . O1B ? ? ? 1_555 C MG . MG ? ? A GNP 501 A MG 502 1_555 ? ? ? ? ? ? ? 2.043 ? ? metalc6 metalc ? ? B GNP . O2G ? ? ? 1_555 C MG . MG ? ? A GNP 501 A MG 502 1_555 ? ? ? ? ? ? ? 2.044 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 59 ? ILE A 63 ? TYR A 100 ILE A 104 A 2 PHE A 71 ? ASP A 75 ? PHE A 112 ASP A 116 A 3 ARG A 22 ? GLY A 27 ? ARG A 63 GLY A 68 A 4 ALA A 98 ? ASP A 104 ? ALA A 139 ASP A 145 A 5 ASN A 131 ? HIS A 137 ? ASN A 172 HIS A 178 A 6 LEU A 172 ? THR A 177 ? LEU A 213 THR A 218 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 61 ? N ASP A 102 O ILE A 73 ? O ILE A 114 A 2 3 O TRP A 74 ? O TRP A 115 N LEU A 25 ? N LEU A 66 A 3 4 N LEU A 24 ? N LEU A 65 O ILE A 100 ? O ILE A 141 A 4 5 N ILE A 103 ? N ILE A 144 O PHE A 135 ? O PHE A 176 A 5 6 N ILE A 136 ? N ILE A 177 O TYR A 175 ? O TYR A 216 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GNP 501 ? 27 'BINDING SITE FOR RESIDUE GNP A 501' AC2 Software A MG 502 ? 5 'BINDING SITE FOR RESIDUE MG A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 27 HOH M . ? HOH A 27 . ? 1_555 ? 2 AC1 27 HOH M . ? HOH A 28 . ? 1_555 ? 3 AC1 27 HOH M . ? HOH A 38 . ? 1_555 ? 4 AC1 27 HOH M . ? HOH A 41 . ? 1_555 ? 5 AC1 27 ARG A 29 ? ARG A 70 . ? 1_555 ? 6 AC1 27 ARG A 30 ? ARG A 71 . ? 1_555 ? 7 AC1 27 SER A 31 ? SER A 72 . ? 1_555 ? 8 AC1 27 GLY A 32 ? GLY A 73 . ? 1_555 ? 9 AC1 27 LYS A 33 ? LYS A 74 . ? 1_555 ? 10 AC1 27 SER A 34 ? SER A 75 . ? 1_555 ? 11 AC1 27 SER A 35 ? SER A 76 . ? 1_555 ? 12 AC1 27 THR A 49 ? THR A 90 . ? 1_555 ? 13 AC1 27 LEU A 50 ? LEU A 91 . ? 1_555 ? 14 AC1 27 SER A 54 ? SER A 95 . ? 1_555 ? 15 AC1 27 THR A 55 ? THR A 96 . ? 1_555 ? 16 AC1 27 GLY A 78 ? GLY A 119 . ? 1_555 ? 17 AC1 27 GLN A 106 ? GLN A 147 . ? 1_555 ? 18 AC1 27 HIS A 137 ? HIS A 178 . ? 1_555 ? 19 AC1 27 LYS A 138 ? LYS A 179 . ? 1_555 ? 20 AC1 27 ASP A 140 ? ASP A 181 . ? 1_555 ? 21 AC1 27 SER A 178 ? SER A 219 . ? 1_555 ? 22 AC1 27 ILE A 179 ? ILE A 220 . ? 1_555 ? 23 AC1 27 HOH M . ? HOH A 243 . ? 1_555 ? 24 AC1 27 HOH M . ? HOH A 247 . ? 1_555 ? 25 AC1 27 HOH M . ? HOH A 258 . ? 1_555 ? 26 AC1 27 HOH M . ? HOH A 285 . ? 1_555 ? 27 AC1 27 MG C . ? MG A 502 . ? 1_555 ? 28 AC2 5 HOH M . ? HOH A 41 . ? 1_555 ? 29 AC2 5 SER A 34 ? SER A 75 . ? 1_555 ? 30 AC2 5 THR A 55 ? THR A 96 . ? 1_555 ? 31 AC2 5 HOH M . ? HOH A 243 . ? 1_555 ? 32 AC2 5 GNP B . ? GNP A 501 . ? 1_555 ? # _atom_sites.entry_id 3LLU _atom_sites.fract_transf_matrix[1][1] 0.013847 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013847 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013854 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 42 ? ? ? A . n A 1 2 HIS 2 43 ? ? ? A . n A 1 3 HIS 3 44 ? ? ? A . n A 1 4 HIS 4 45 ? ? ? A . n A 1 5 HIS 5 46 ? ? ? A . n A 1 6 HIS 6 47 ? ? ? A . n A 1 7 HIS 7 48 ? ? ? A . n A 1 8 SER 8 49 ? ? ? A . n A 1 9 SER 9 50 ? ? ? A . n A 1 10 GLY 10 51 ? ? ? A . n A 1 11 ARG 11 52 ? ? ? A . n A 1 12 GLU 12 53 ? ? ? A . n A 1 13 ASN 13 54 ? ? ? A . n A 1 14 LEU 14 55 ? ? ? A . n A 1 15 TYR 15 56 ? ? ? A . n A 1 16 PHE 16 57 ? ? ? A . n A 1 17 GLN 17 58 ? ? ? A . n A 1 18 GLY 18 59 ? ? ? A . n A 1 19 SER 19 60 ? ? ? A . n A 1 20 LYS 20 61 61 LYS LYS A . n A 1 21 PRO 21 62 62 PRO PRO A . n A 1 22 ARG 22 63 63 ARG ARG A . n A 1 23 ILE 23 64 64 ILE ILE A . n A 1 24 LEU 24 65 65 LEU LEU A . n A 1 25 LEU 25 66 66 LEU LEU A . n A 1 26 MET 26 67 67 MET MET A . n A 1 27 GLY 27 68 68 GLY GLY A . n A 1 28 LEU 28 69 69 LEU LEU A . n A 1 29 ARG 29 70 70 ARG ARG A . n A 1 30 ARG 30 71 71 ARG ARG A . n A 1 31 SER 31 72 72 SER SER A . n A 1 32 GLY 32 73 73 GLY GLY A . n A 1 33 LYS 33 74 74 LYS LYS A . n A 1 34 SER 34 75 75 SER SER A . n A 1 35 SER 35 76 76 SER SER A . n A 1 36 ILE 36 77 77 ILE ILE A . n A 1 37 GLN 37 78 78 GLN GLN A . n A 1 38 LYS 38 79 79 LYS LYS A . n A 1 39 VAL 39 80 80 VAL VAL A . n A 1 40 VAL 40 81 81 VAL VAL A . n A 1 41 PHE 41 82 82 PHE PHE A . n A 1 42 HIS 42 83 83 HIS HIS A . n A 1 43 LYS 43 84 84 LYS LYS A . n A 1 44 MET 44 85 85 MET MET A . n A 1 45 SER 45 86 86 SER SER A . n A 1 46 PRO 46 87 87 PRO PRO A . n A 1 47 ASN 47 88 88 ASN ASN A . n A 1 48 GLU 48 89 89 GLU GLU A . n A 1 49 THR 49 90 90 THR THR A . n A 1 50 LEU 50 91 91 LEU LEU A . n A 1 51 PHE 51 92 92 PHE PHE A . n A 1 52 LEU 52 93 93 LEU LEU A . n A 1 53 GLU 53 94 94 GLU GLU A . n A 1 54 SER 54 95 95 SER SER A . n A 1 55 THR 55 96 96 THR THR A . n A 1 56 ASN 56 97 97 ASN ASN A . n A 1 57 LYS 57 98 98 LYS LYS A . n A 1 58 ILE 58 99 99 ILE ILE A . n A 1 59 TYR 59 100 100 TYR TYR A . n A 1 60 LYS 60 101 101 LYS LYS A . n A 1 61 ASP 61 102 102 ASP ASP A . n A 1 62 ASP 62 103 103 ASP ASP A . n A 1 63 ILE 63 104 104 ILE ILE A . n A 1 64 SER 64 105 105 SER SER A . n A 1 65 ASN 65 106 106 ASN ASN A . n A 1 66 SER 66 107 107 SER SER A . n A 1 67 SER 67 108 108 SER SER A . n A 1 68 PHE 68 109 109 PHE PHE A . n A 1 69 VAL 69 110 110 VAL VAL A . n A 1 70 ASN 70 111 111 ASN ASN A . n A 1 71 PHE 71 112 112 PHE PHE A . n A 1 72 GLN 72 113 113 GLN GLN A . n A 1 73 ILE 73 114 114 ILE ILE A . n A 1 74 TRP 74 115 115 TRP TRP A . n A 1 75 ASP 75 116 116 ASP ASP A . n A 1 76 PHE 76 117 117 PHE PHE A . n A 1 77 PRO 77 118 118 PRO PRO A . n A 1 78 GLY 78 119 119 GLY GLY A . n A 1 79 GLN 79 120 120 GLN GLN A . n A 1 80 MET 80 121 121 MET MET A . n A 1 81 ASP 81 122 122 ASP ASP A . n A 1 82 PHE 82 123 123 PHE PHE A . n A 1 83 PHE 83 124 124 PHE PHE A . n A 1 84 ASP 84 125 125 ASP ASP A . n A 1 85 PRO 85 126 126 PRO PRO A . n A 1 86 THR 86 127 127 THR THR A . n A 1 87 PHE 87 128 128 PHE PHE A . n A 1 88 ASP 88 129 129 ASP ASP A . n A 1 89 TYR 89 130 130 TYR TYR A . n A 1 90 GLU 90 131 131 GLU GLU A . n A 1 91 MET 91 132 132 MET MET A . n A 1 92 ILE 92 133 133 ILE ILE A . n A 1 93 PHE 93 134 134 PHE PHE A . n A 1 94 ARG 94 135 135 ARG ARG A . n A 1 95 GLY 95 136 136 GLY GLY A . n A 1 96 THR 96 137 137 THR THR A . n A 1 97 GLY 97 138 138 GLY GLY A . n A 1 98 ALA 98 139 139 ALA ALA A . n A 1 99 LEU 99 140 140 LEU LEU A . n A 1 100 ILE 100 141 141 ILE ILE A . n A 1 101 TYR 101 142 142 TYR TYR A . n A 1 102 VAL 102 143 143 VAL VAL A . n A 1 103 ILE 103 144 144 ILE ILE A . n A 1 104 ASP 104 145 145 ASP ASP A . n A 1 105 ALA 105 146 146 ALA ALA A . n A 1 106 GLN 106 147 147 GLN GLN A . n A 1 107 ASP 107 148 148 ASP ASP A . n A 1 108 ASP 108 149 149 ASP ASP A . n A 1 109 TYR 109 150 150 TYR TYR A . n A 1 110 MET 110 151 151 MET MET A . n A 1 111 GLU 111 152 152 GLU GLU A . n A 1 112 ALA 112 153 153 ALA ALA A . n A 1 113 LEU 113 154 154 LEU LEU A . n A 1 114 THR 114 155 155 THR THR A . n A 1 115 ARG 115 156 156 ARG ARG A . n A 1 116 LEU 116 157 157 LEU LEU A . n A 1 117 HIS 117 158 158 HIS HIS A . n A 1 118 ILE 118 159 159 ILE ILE A . n A 1 119 THR 119 160 160 THR THR A . n A 1 120 VAL 120 161 161 VAL VAL A . n A 1 121 SER 121 162 162 SER SER A . n A 1 122 LYS 122 163 163 LYS LYS A . n A 1 123 ALA 123 164 164 ALA ALA A . n A 1 124 TYR 124 165 165 TYR TYR A . n A 1 125 LYS 125 166 166 LYS LYS A . n A 1 126 VAL 126 167 167 VAL VAL A . n A 1 127 ASN 127 168 168 ASN ASN A . n A 1 128 PRO 128 169 169 PRO PRO A . n A 1 129 ASP 129 170 170 ASP ASP A . n A 1 130 MET 130 171 171 MET MET A . n A 1 131 ASN 131 172 172 ASN ASN A . n A 1 132 PHE 132 173 173 PHE PHE A . n A 1 133 GLU 133 174 174 GLU GLU A . n A 1 134 VAL 134 175 175 VAL VAL A . n A 1 135 PHE 135 176 176 PHE PHE A . n A 1 136 ILE 136 177 177 ILE ILE A . n A 1 137 HIS 137 178 178 HIS HIS A . n A 1 138 LYS 138 179 179 LYS LYS A . n A 1 139 VAL 139 180 180 VAL VAL A . n A 1 140 ASP 140 181 181 ASP ASP A . n A 1 141 GLY 141 182 182 GLY GLY A . n A 1 142 LEU 142 183 183 LEU LEU A . n A 1 143 SER 143 184 184 SER SER A . n A 1 144 ASP 144 185 185 ASP ASP A . n A 1 145 ASP 145 186 186 ASP ASP A . n A 1 146 HIS 146 187 187 HIS HIS A . n A 1 147 LYS 147 188 188 LYS LYS A . n A 1 148 ILE 148 189 189 ILE ILE A . n A 1 149 GLU 149 190 190 GLU GLU A . n A 1 150 THR 150 191 191 THR THR A . n A 1 151 GLN 151 192 192 GLN GLN A . n A 1 152 ARG 152 193 193 ARG ARG A . n A 1 153 ASP 153 194 194 ASP ASP A . n A 1 154 ILE 154 195 195 ILE ILE A . n A 1 155 HIS 155 196 196 HIS HIS A . n A 1 156 GLN 156 197 197 GLN GLN A . n A 1 157 ARG 157 198 198 ARG ARG A . n A 1 158 ALA 158 199 199 ALA ALA A . n A 1 159 ASN 159 200 200 ASN ASN A . n A 1 160 ASP 160 201 201 ASP ASP A . n A 1 161 ASP 161 202 202 ASP ASP A . n A 1 162 LEU 162 203 203 LEU LEU A . n A 1 163 ALA 163 204 204 ALA ALA A . n A 1 164 ASP 164 205 205 ASP ASP A . n A 1 165 ALA 165 206 206 ALA ALA A . n A 1 166 GLY 166 207 207 GLY GLY A . n A 1 167 LEU 167 208 208 LEU LEU A . n A 1 168 GLU 168 209 209 GLU GLU A . n A 1 169 LYS 169 210 210 LYS LYS A . n A 1 170 LEU 170 211 211 LEU LEU A . n A 1 171 HIS 171 212 212 HIS HIS A . n A 1 172 LEU 172 213 213 LEU LEU A . n A 1 173 SER 173 214 214 SER SER A . n A 1 174 PHE 174 215 215 PHE PHE A . n A 1 175 TYR 175 216 216 TYR TYR A . n A 1 176 LEU 176 217 217 LEU LEU A . n A 1 177 THR 177 218 218 THR THR A . n A 1 178 SER 178 219 219 SER SER A . n A 1 179 ILE 179 220 220 ILE ILE A . n A 1 180 TYR 180 221 221 TYR TYR A . n A 1 181 ASP 181 222 222 ASP ASP A . n A 1 182 HIS 182 223 223 HIS HIS A . n A 1 183 SER 183 224 224 SER SER A . n A 1 184 ILE 184 225 225 ILE ILE A . n A 1 185 PHE 185 226 226 PHE PHE A . n A 1 186 GLU 186 227 227 GLU GLU A . n A 1 187 ALA 187 228 228 ALA ALA A . n A 1 188 PHE 188 229 229 PHE PHE A . n A 1 189 SER 189 230 230 SER SER A . n A 1 190 LYS 190 231 231 LYS LYS A . n A 1 191 VAL 191 232 232 VAL VAL A . n A 1 192 VAL 192 233 233 VAL VAL A . n A 1 193 GLN 193 234 234 GLN GLN A . n A 1 194 LYS 194 235 235 LYS LYS A . n A 1 195 LEU 195 236 236 LEU LEU A . n A 1 196 ILE 196 237 237 ILE ILE A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP 1 501 501 GNP GNP A . C 3 MG 1 502 502 MG MG A . D 4 UNX 1 1 1 UNX UNX A . E 4 UNX 1 2 2 UNX UNX A . F 4 UNX 1 3 3 UNX UNX A . G 4 UNX 1 4 4 UNX UNX A . H 4 UNX 1 5 5 UNX UNX A . I 4 UNX 1 6 6 UNX UNX A . J 4 UNX 1 7 7 UNX UNX A . K 4 UNX 1 8 8 UNX UNX A . L 4 UNX 1 9 9 UNX UNX A . M 5 HOH 1 10 10 HOH HOH A . M 5 HOH 2 11 11 HOH HOH A . M 5 HOH 3 12 12 HOH HOH A . M 5 HOH 4 13 13 HOH HOH A . M 5 HOH 5 14 14 HOH HOH A . M 5 HOH 6 15 15 HOH HOH A . M 5 HOH 7 16 16 HOH HOH A . M 5 HOH 8 17 17 HOH HOH A . M 5 HOH 9 18 18 HOH HOH A . M 5 HOH 10 19 19 HOH HOH A . M 5 HOH 11 20 20 HOH HOH A . M 5 HOH 12 21 21 HOH HOH A . M 5 HOH 13 22 22 HOH HOH A . M 5 HOH 14 23 23 HOH HOH A . M 5 HOH 15 24 24 HOH HOH A . M 5 HOH 16 25 25 HOH HOH A . M 5 HOH 17 26 26 HOH HOH A . M 5 HOH 18 27 27 HOH HOH A . M 5 HOH 19 28 28 HOH HOH A . M 5 HOH 20 29 29 HOH HOH A . M 5 HOH 21 30 30 HOH HOH A . M 5 HOH 22 31 31 HOH HOH A . M 5 HOH 23 32 32 HOH HOH A . M 5 HOH 24 33 33 HOH HOH A . M 5 HOH 25 34 34 HOH HOH A . M 5 HOH 26 35 35 HOH HOH A . M 5 HOH 27 36 36 HOH HOH A . M 5 HOH 28 37 37 HOH HOH A . M 5 HOH 29 38 38 HOH HOH A . M 5 HOH 30 39 39 HOH HOH A . M 5 HOH 31 40 40 HOH HOH A . M 5 HOH 32 41 41 HOH HOH A . M 5 HOH 33 238 1 HOH HOH A . M 5 HOH 34 239 2 HOH HOH A . M 5 HOH 35 240 3 HOH HOH A . M 5 HOH 36 241 4 HOH HOH A . M 5 HOH 37 242 5 HOH HOH A . M 5 HOH 38 243 6 HOH HOH A . M 5 HOH 39 244 7 HOH HOH A . M 5 HOH 40 245 8 HOH HOH A . M 5 HOH 41 246 9 HOH HOH A . M 5 HOH 42 247 42 HOH HOH A . M 5 HOH 43 248 43 HOH HOH A . M 5 HOH 44 249 44 HOH HOH A . M 5 HOH 45 250 45 HOH HOH A . M 5 HOH 46 251 46 HOH HOH A . M 5 HOH 47 252 47 HOH HOH A . M 5 HOH 48 253 48 HOH HOH A . M 5 HOH 49 254 49 HOH HOH A . M 5 HOH 50 255 50 HOH HOH A . M 5 HOH 51 256 51 HOH HOH A . M 5 HOH 52 257 52 HOH HOH A . M 5 HOH 53 258 53 HOH HOH A . M 5 HOH 54 259 54 HOH HOH A . M 5 HOH 55 260 55 HOH HOH A . M 5 HOH 56 261 56 HOH HOH A . M 5 HOH 57 262 57 HOH HOH A . M 5 HOH 58 263 58 HOH HOH A . M 5 HOH 59 264 59 HOH HOH A . M 5 HOH 60 265 60 HOH HOH A . M 5 HOH 61 266 61 HOH HOH A . M 5 HOH 62 267 62 HOH HOH A . M 5 HOH 63 268 63 HOH HOH A . M 5 HOH 64 269 64 HOH HOH A . M 5 HOH 65 270 65 HOH HOH A . M 5 HOH 66 271 66 HOH HOH A . M 5 HOH 67 272 67 HOH HOH A . M 5 HOH 68 273 68 HOH HOH A . M 5 HOH 69 274 69 HOH HOH A . M 5 HOH 70 275 71 HOH HOH A . M 5 HOH 71 276 72 HOH HOH A . M 5 HOH 72 277 73 HOH HOH A . M 5 HOH 73 278 75 HOH HOH A . M 5 HOH 74 279 76 HOH HOH A . M 5 HOH 75 280 77 HOH HOH A . M 5 HOH 76 281 78 HOH HOH A . M 5 HOH 77 282 79 HOH HOH A . M 5 HOH 78 283 80 HOH HOH A . M 5 HOH 79 284 81 HOH HOH A . M 5 HOH 80 285 82 HOH HOH A . M 5 HOH 81 286 83 HOH HOH A . M 5 HOH 82 287 84 HOH HOH A . M 5 HOH 83 288 85 HOH HOH A . M 5 HOH 84 289 86 HOH HOH A . M 5 HOH 85 290 87 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8450 ? 1 MORE -91 ? 1 'SSA (A^2)' 32420 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 72.2200000000 0.0000000000 -1.0000000000 0.0000000000 72.2200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -y+1,x,z 0.0000000000 -1.0000000000 0.0000000000 72.2200000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_565 y,-x+1,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 72.2200000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? M HOH . ? A HOH 41 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 OG ? A SER 34 ? A SER 75 ? 1_555 88.2 ? 2 O ? M HOH . ? A HOH 41 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 OG1 ? A THR 55 ? A THR 96 ? 1_555 89.9 ? 3 OG ? A SER 34 ? A SER 75 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 OG1 ? A THR 55 ? A THR 96 ? 1_555 85.1 ? 4 O ? M HOH . ? A HOH 41 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? M HOH . ? A HOH 243 ? 1_555 174.2 ? 5 OG ? A SER 34 ? A SER 75 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? M HOH . ? A HOH 243 ? 1_555 86.0 ? 6 OG1 ? A THR 55 ? A THR 96 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O ? M HOH . ? A HOH 243 ? 1_555 89.5 ? 7 O ? M HOH . ? A HOH 41 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1B ? B GNP . ? A GNP 501 ? 1_555 88.1 ? 8 OG ? A SER 34 ? A SER 75 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1B ? B GNP . ? A GNP 501 ? 1_555 94.2 ? 9 OG1 ? A THR 55 ? A THR 96 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1B ? B GNP . ? A GNP 501 ? 1_555 177.9 ? 10 O ? M HOH . ? A HOH 243 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O1B ? B GNP . ? A GNP 501 ? 1_555 92.4 ? 11 O ? M HOH . ? A HOH 41 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O2G ? B GNP . ? A GNP 501 ? 1_555 90.4 ? 12 OG ? A SER 34 ? A SER 75 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O2G ? B GNP . ? A GNP 501 ? 1_555 172.1 ? 13 OG1 ? A THR 55 ? A THR 96 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O2G ? B GNP . ? A GNP 501 ? 1_555 87.2 ? 14 O ? M HOH . ? A HOH 243 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O2G ? B GNP . ? A GNP 501 ? 1_555 95.4 ? 15 O1B ? B GNP . ? A GNP 501 ? 1_555 MG ? C MG . ? A MG 502 ? 1_555 O2G ? B GNP . ? A GNP 501 ? 1_555 93.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_ref_seq_dif.details' 29 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 26.1668 _pdbx_refine_tls.origin_y 11.7144 _pdbx_refine_tls.origin_z 26.7548 _pdbx_refine_tls.T[1][1] 0.0155 _pdbx_refine_tls.T[2][2] 0.0214 _pdbx_refine_tls.T[3][3] 0.0246 _pdbx_refine_tls.T[1][2] -0.0029 _pdbx_refine_tls.T[1][3] 0.0096 _pdbx_refine_tls.T[2][3] 0.0021 _pdbx_refine_tls.L[1][1] 1.7053 _pdbx_refine_tls.L[2][2] 2.1511 _pdbx_refine_tls.L[3][3] 1.4093 _pdbx_refine_tls.L[1][2] 0.2655 _pdbx_refine_tls.L[1][3] 0.0425 _pdbx_refine_tls.L[2][3] -0.0752 _pdbx_refine_tls.S[1][1] 0.0234 _pdbx_refine_tls.S[2][2] -0.0207 _pdbx_refine_tls.S[3][3] -0.0028 _pdbx_refine_tls.S[1][2] -0.0319 _pdbx_refine_tls.S[1][3] -0.0128 _pdbx_refine_tls.S[2][3] 0.1116 _pdbx_refine_tls.S[2][1] 0.0828 _pdbx_refine_tls.S[3][1] 0.0990 _pdbx_refine_tls.S[3][2] -0.1176 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id -10 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 9999 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? other 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC 5.5.0102 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 7 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 61 ? CG ? A LYS 20 CG 2 1 Y 1 A LYS 61 ? CD ? A LYS 20 CD 3 1 Y 1 A LYS 61 ? CE ? A LYS 20 CE 4 1 Y 1 A LYS 61 ? NZ ? A LYS 20 NZ 5 1 Y 1 A ARG 71 ? NE ? A ARG 30 NE 6 1 Y 1 A ARG 71 ? CZ ? A ARG 30 CZ 7 1 Y 1 A ARG 71 ? NH1 ? A ARG 30 NH1 8 1 Y 1 A ARG 71 ? NH2 ? A ARG 30 NH2 9 1 Y 1 A LYS 98 ? CD ? A LYS 57 CD 10 1 Y 1 A LYS 98 ? CE ? A LYS 57 CE 11 1 Y 1 A LYS 98 ? NZ ? A LYS 57 NZ 12 1 Y 1 A SER 105 ? OG ? A SER 64 OG 13 1 Y 1 A THR 127 ? OG1 ? A THR 86 OG1 14 1 Y 1 A THR 127 ? CG2 ? A THR 86 CG2 15 1 Y 1 A GLU 190 ? CD ? A GLU 149 CD 16 1 Y 1 A GLU 190 ? OE1 ? A GLU 149 OE1 17 1 Y 1 A GLU 190 ? OE2 ? A GLU 149 OE2 18 1 Y 1 A LYS 210 ? CE ? A LYS 169 CE 19 1 Y 1 A LYS 210 ? NZ ? A LYS 169 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 42 ? A MET 1 2 1 Y 1 A HIS 43 ? A HIS 2 3 1 Y 1 A HIS 44 ? A HIS 3 4 1 Y 1 A HIS 45 ? A HIS 4 5 1 Y 1 A HIS 46 ? A HIS 5 6 1 Y 1 A HIS 47 ? A HIS 6 7 1 Y 1 A HIS 48 ? A HIS 7 8 1 Y 1 A SER 49 ? A SER 8 9 1 Y 1 A SER 50 ? A SER 9 10 1 Y 1 A GLY 51 ? A GLY 10 11 1 Y 1 A ARG 52 ? A ARG 11 12 1 Y 1 A GLU 53 ? A GLU 12 13 1 Y 1 A ASN 54 ? A ASN 13 14 1 Y 1 A LEU 55 ? A LEU 14 15 1 Y 1 A TYR 56 ? A TYR 15 16 1 Y 1 A PHE 57 ? A PHE 16 17 1 Y 1 A GLN 58 ? A GLN 17 18 1 Y 1 A GLY 59 ? A GLY 18 19 1 Y 1 A SER 60 ? A SER 19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GNP PG P N N 123 GNP O1G O N N 124 GNP O2G O N N 125 GNP O3G O N N 126 GNP N3B N N N 127 GNP PB P N R 128 GNP O1B O N N 129 GNP O2B O N N 130 GNP O3A O N N 131 GNP PA P N S 132 GNP O1A O N N 133 GNP O2A O N N 134 GNP "O5'" O N N 135 GNP "C5'" C N N 136 GNP "C4'" C N R 137 GNP "O4'" O N N 138 GNP "C3'" C N S 139 GNP "O3'" O N N 140 GNP "C2'" C N R 141 GNP "O2'" O N N 142 GNP "C1'" C N R 143 GNP N9 N Y N 144 GNP C8 C Y N 145 GNP N7 N Y N 146 GNP C5 C Y N 147 GNP C6 C Y N 148 GNP O6 O N N 149 GNP N1 N Y N 150 GNP C2 C Y N 151 GNP N2 N N N 152 GNP N3 N Y N 153 GNP C4 C Y N 154 GNP HOG2 H N N 155 GNP HOG3 H N N 156 GNP HNB3 H N N 157 GNP HOB2 H N N 158 GNP HOA2 H N N 159 GNP "H5'2" H N N 160 GNP "H5'1" H N N 161 GNP "H4'" H N N 162 GNP "H3'" H N N 163 GNP "HO3'" H N N 164 GNP "H2'" H N N 165 GNP "HO2'" H N N 166 GNP "H1'" H N N 167 GNP H8 H N N 168 GNP HN1 H N N 169 GNP HN21 H N N 170 GNP HN22 H N N 171 HIS N N N N 172 HIS CA C N S 173 HIS C C N N 174 HIS O O N N 175 HIS CB C N N 176 HIS CG C Y N 177 HIS ND1 N Y N 178 HIS CD2 C Y N 179 HIS CE1 C Y N 180 HIS NE2 N Y N 181 HIS OXT O N N 182 HIS H H N N 183 HIS H2 H N N 184 HIS HA H N N 185 HIS HB2 H N N 186 HIS HB3 H N N 187 HIS HD1 H N N 188 HIS HD2 H N N 189 HIS HE1 H N N 190 HIS HE2 H N N 191 HIS HXT H N N 192 HOH O O N N 193 HOH H1 H N N 194 HOH H2 H N N 195 ILE N N N N 196 ILE CA C N S 197 ILE C C N N 198 ILE O O N N 199 ILE CB C N S 200 ILE CG1 C N N 201 ILE CG2 C N N 202 ILE CD1 C N N 203 ILE OXT O N N 204 ILE H H N N 205 ILE H2 H N N 206 ILE HA H N N 207 ILE HB H N N 208 ILE HG12 H N N 209 ILE HG13 H N N 210 ILE HG21 H N N 211 ILE HG22 H N N 212 ILE HG23 H N N 213 ILE HD11 H N N 214 ILE HD12 H N N 215 ILE HD13 H N N 216 ILE HXT H N N 217 LEU N N N N 218 LEU CA C N S 219 LEU C C N N 220 LEU O O N N 221 LEU CB C N N 222 LEU CG C N N 223 LEU CD1 C N N 224 LEU CD2 C N N 225 LEU OXT O N N 226 LEU H H N N 227 LEU H2 H N N 228 LEU HA H N N 229 LEU HB2 H N N 230 LEU HB3 H N N 231 LEU HG H N N 232 LEU HD11 H N N 233 LEU HD12 H N N 234 LEU HD13 H N N 235 LEU HD21 H N N 236 LEU HD22 H N N 237 LEU HD23 H N N 238 LEU HXT H N N 239 LYS N N N N 240 LYS CA C N S 241 LYS C C N N 242 LYS O O N N 243 LYS CB C N N 244 LYS CG C N N 245 LYS CD C N N 246 LYS CE C N N 247 LYS NZ N N N 248 LYS OXT O N N 249 LYS H H N N 250 LYS H2 H N N 251 LYS HA H N N 252 LYS HB2 H N N 253 LYS HB3 H N N 254 LYS HG2 H N N 255 LYS HG3 H N N 256 LYS HD2 H N N 257 LYS HD3 H N N 258 LYS HE2 H N N 259 LYS HE3 H N N 260 LYS HZ1 H N N 261 LYS HZ2 H N N 262 LYS HZ3 H N N 263 LYS HXT H N N 264 MET N N N N 265 MET CA C N S 266 MET C C N N 267 MET O O N N 268 MET CB C N N 269 MET CG C N N 270 MET SD S N N 271 MET CE C N N 272 MET OXT O N N 273 MET H H N N 274 MET H2 H N N 275 MET HA H N N 276 MET HB2 H N N 277 MET HB3 H N N 278 MET HG2 H N N 279 MET HG3 H N N 280 MET HE1 H N N 281 MET HE2 H N N 282 MET HE3 H N N 283 MET HXT H N N 284 MG MG MG N N 285 PHE N N N N 286 PHE CA C N S 287 PHE C C N N 288 PHE O O N N 289 PHE CB C N N 290 PHE CG C Y N 291 PHE CD1 C Y N 292 PHE CD2 C Y N 293 PHE CE1 C Y N 294 PHE CE2 C Y N 295 PHE CZ C Y N 296 PHE OXT O N N 297 PHE H H N N 298 PHE H2 H N N 299 PHE HA H N N 300 PHE HB2 H N N 301 PHE HB3 H N N 302 PHE HD1 H N N 303 PHE HD2 H N N 304 PHE HE1 H N N 305 PHE HE2 H N N 306 PHE HZ H N N 307 PHE HXT H N N 308 PRO N N N N 309 PRO CA C N S 310 PRO C C N N 311 PRO O O N N 312 PRO CB C N N 313 PRO CG C N N 314 PRO CD C N N 315 PRO OXT O N N 316 PRO H H N N 317 PRO HA H N N 318 PRO HB2 H N N 319 PRO HB3 H N N 320 PRO HG2 H N N 321 PRO HG3 H N N 322 PRO HD2 H N N 323 PRO HD3 H N N 324 PRO HXT H N N 325 SER N N N N 326 SER CA C N S 327 SER C C N N 328 SER O O N N 329 SER CB C N N 330 SER OG O N N 331 SER OXT O N N 332 SER H H N N 333 SER H2 H N N 334 SER HA H N N 335 SER HB2 H N N 336 SER HB3 H N N 337 SER HG H N N 338 SER HXT H N N 339 THR N N N N 340 THR CA C N S 341 THR C C N N 342 THR O O N N 343 THR CB C N R 344 THR OG1 O N N 345 THR CG2 C N N 346 THR OXT O N N 347 THR H H N N 348 THR H2 H N N 349 THR HA H N N 350 THR HB H N N 351 THR HG1 H N N 352 THR HG21 H N N 353 THR HG22 H N N 354 THR HG23 H N N 355 THR HXT H N N 356 TRP N N N N 357 TRP CA C N S 358 TRP C C N N 359 TRP O O N N 360 TRP CB C N N 361 TRP CG C Y N 362 TRP CD1 C Y N 363 TRP CD2 C Y N 364 TRP NE1 N Y N 365 TRP CE2 C Y N 366 TRP CE3 C Y N 367 TRP CZ2 C Y N 368 TRP CZ3 C Y N 369 TRP CH2 C Y N 370 TRP OXT O N N 371 TRP H H N N 372 TRP H2 H N N 373 TRP HA H N N 374 TRP HB2 H N N 375 TRP HB3 H N N 376 TRP HD1 H N N 377 TRP HE1 H N N 378 TRP HE3 H N N 379 TRP HZ2 H N N 380 TRP HZ3 H N N 381 TRP HH2 H N N 382 TRP HXT H N N 383 TYR N N N N 384 TYR CA C N S 385 TYR C C N N 386 TYR O O N N 387 TYR CB C N N 388 TYR CG C Y N 389 TYR CD1 C Y N 390 TYR CD2 C Y N 391 TYR CE1 C Y N 392 TYR CE2 C Y N 393 TYR CZ C Y N 394 TYR OH O N N 395 TYR OXT O N N 396 TYR H H N N 397 TYR H2 H N N 398 TYR HA H N N 399 TYR HB2 H N N 400 TYR HB3 H N N 401 TYR HD1 H N N 402 TYR HD2 H N N 403 TYR HE1 H N N 404 TYR HE2 H N N 405 TYR HH H N N 406 TYR HXT H N N 407 VAL N N N N 408 VAL CA C N S 409 VAL C C N N 410 VAL O O N N 411 VAL CB C N N 412 VAL CG1 C N N 413 VAL CG2 C N N 414 VAL OXT O N N 415 VAL H H N N 416 VAL H2 H N N 417 VAL HA H N N 418 VAL HB H N N 419 VAL HG11 H N N 420 VAL HG12 H N N 421 VAL HG13 H N N 422 VAL HG21 H N N 423 VAL HG22 H N N 424 VAL HG23 H N N 425 VAL HXT H N N 426 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GNP PG O1G doub N N 116 GNP PG O2G sing N N 117 GNP PG O3G sing N N 118 GNP PG N3B sing N N 119 GNP O2G HOG2 sing N N 120 GNP O3G HOG3 sing N N 121 GNP N3B PB sing N N 122 GNP N3B HNB3 sing N N 123 GNP PB O1B doub N N 124 GNP PB O2B sing N N 125 GNP PB O3A sing N N 126 GNP O2B HOB2 sing N N 127 GNP O3A PA sing N N 128 GNP PA O1A doub N N 129 GNP PA O2A sing N N 130 GNP PA "O5'" sing N N 131 GNP O2A HOA2 sing N N 132 GNP "O5'" "C5'" sing N N 133 GNP "C5'" "C4'" sing N N 134 GNP "C5'" "H5'2" sing N N 135 GNP "C5'" "H5'1" sing N N 136 GNP "C4'" "O4'" sing N N 137 GNP "C4'" "C3'" sing N N 138 GNP "C4'" "H4'" sing N N 139 GNP "O4'" "C1'" sing N N 140 GNP "C3'" "O3'" sing N N 141 GNP "C3'" "C2'" sing N N 142 GNP "C3'" "H3'" sing N N 143 GNP "O3'" "HO3'" sing N N 144 GNP "C2'" "O2'" sing N N 145 GNP "C2'" "C1'" sing N N 146 GNP "C2'" "H2'" sing N N 147 GNP "O2'" "HO2'" sing N N 148 GNP "C1'" N9 sing N N 149 GNP "C1'" "H1'" sing N N 150 GNP N9 C8 sing Y N 151 GNP N9 C4 sing Y N 152 GNP C8 N7 doub Y N 153 GNP C8 H8 sing N N 154 GNP N7 C5 sing Y N 155 GNP C5 C6 sing Y N 156 GNP C5 C4 doub Y N 157 GNP C6 O6 doub N N 158 GNP C6 N1 sing Y N 159 GNP N1 C2 sing Y N 160 GNP N1 HN1 sing N N 161 GNP C2 N2 sing N N 162 GNP C2 N3 doub Y N 163 GNP N2 HN21 sing N N 164 GNP N2 HN22 sing N N 165 GNP N3 C4 sing Y N 166 HIS N CA sing N N 167 HIS N H sing N N 168 HIS N H2 sing N N 169 HIS CA C sing N N 170 HIS CA CB sing N N 171 HIS CA HA sing N N 172 HIS C O doub N N 173 HIS C OXT sing N N 174 HIS CB CG sing N N 175 HIS CB HB2 sing N N 176 HIS CB HB3 sing N N 177 HIS CG ND1 sing Y N 178 HIS CG CD2 doub Y N 179 HIS ND1 CE1 doub Y N 180 HIS ND1 HD1 sing N N 181 HIS CD2 NE2 sing Y N 182 HIS CD2 HD2 sing N N 183 HIS CE1 NE2 sing Y N 184 HIS CE1 HE1 sing N N 185 HIS NE2 HE2 sing N N 186 HIS OXT HXT sing N N 187 HOH O H1 sing N N 188 HOH O H2 sing N N 189 ILE N CA sing N N 190 ILE N H sing N N 191 ILE N H2 sing N N 192 ILE CA C sing N N 193 ILE CA CB sing N N 194 ILE CA HA sing N N 195 ILE C O doub N N 196 ILE C OXT sing N N 197 ILE CB CG1 sing N N 198 ILE CB CG2 sing N N 199 ILE CB HB sing N N 200 ILE CG1 CD1 sing N N 201 ILE CG1 HG12 sing N N 202 ILE CG1 HG13 sing N N 203 ILE CG2 HG21 sing N N 204 ILE CG2 HG22 sing N N 205 ILE CG2 HG23 sing N N 206 ILE CD1 HD11 sing N N 207 ILE CD1 HD12 sing N N 208 ILE CD1 HD13 sing N N 209 ILE OXT HXT sing N N 210 LEU N CA sing N N 211 LEU N H sing N N 212 LEU N H2 sing N N 213 LEU CA C sing N N 214 LEU CA CB sing N N 215 LEU CA HA sing N N 216 LEU C O doub N N 217 LEU C OXT sing N N 218 LEU CB CG sing N N 219 LEU CB HB2 sing N N 220 LEU CB HB3 sing N N 221 LEU CG CD1 sing N N 222 LEU CG CD2 sing N N 223 LEU CG HG sing N N 224 LEU CD1 HD11 sing N N 225 LEU CD1 HD12 sing N N 226 LEU CD1 HD13 sing N N 227 LEU CD2 HD21 sing N N 228 LEU CD2 HD22 sing N N 229 LEU CD2 HD23 sing N N 230 LEU OXT HXT sing N N 231 LYS N CA sing N N 232 LYS N H sing N N 233 LYS N H2 sing N N 234 LYS CA C sing N N 235 LYS CA CB sing N N 236 LYS CA HA sing N N 237 LYS C O doub N N 238 LYS C OXT sing N N 239 LYS CB CG sing N N 240 LYS CB HB2 sing N N 241 LYS CB HB3 sing N N 242 LYS CG CD sing N N 243 LYS CG HG2 sing N N 244 LYS CG HG3 sing N N 245 LYS CD CE sing N N 246 LYS CD HD2 sing N N 247 LYS CD HD3 sing N N 248 LYS CE NZ sing N N 249 LYS CE HE2 sing N N 250 LYS CE HE3 sing N N 251 LYS NZ HZ1 sing N N 252 LYS NZ HZ2 sing N N 253 LYS NZ HZ3 sing N N 254 LYS OXT HXT sing N N 255 MET N CA sing N N 256 MET N H sing N N 257 MET N H2 sing N N 258 MET CA C sing N N 259 MET CA CB sing N N 260 MET CA HA sing N N 261 MET C O doub N N 262 MET C OXT sing N N 263 MET CB CG sing N N 264 MET CB HB2 sing N N 265 MET CB HB3 sing N N 266 MET CG SD sing N N 267 MET CG HG2 sing N N 268 MET CG HG3 sing N N 269 MET SD CE sing N N 270 MET CE HE1 sing N N 271 MET CE HE2 sing N N 272 MET CE HE3 sing N N 273 MET OXT HXT sing N N 274 PHE N CA sing N N 275 PHE N H sing N N 276 PHE N H2 sing N N 277 PHE CA C sing N N 278 PHE CA CB sing N N 279 PHE CA HA sing N N 280 PHE C O doub N N 281 PHE C OXT sing N N 282 PHE CB CG sing N N 283 PHE CB HB2 sing N N 284 PHE CB HB3 sing N N 285 PHE CG CD1 doub Y N 286 PHE CG CD2 sing Y N 287 PHE CD1 CE1 sing Y N 288 PHE CD1 HD1 sing N N 289 PHE CD2 CE2 doub Y N 290 PHE CD2 HD2 sing N N 291 PHE CE1 CZ doub Y N 292 PHE CE1 HE1 sing N N 293 PHE CE2 CZ sing Y N 294 PHE CE2 HE2 sing N N 295 PHE CZ HZ sing N N 296 PHE OXT HXT sing N N 297 PRO N CA sing N N 298 PRO N CD sing N N 299 PRO N H sing N N 300 PRO CA C sing N N 301 PRO CA CB sing N N 302 PRO CA HA sing N N 303 PRO C O doub N N 304 PRO C OXT sing N N 305 PRO CB CG sing N N 306 PRO CB HB2 sing N N 307 PRO CB HB3 sing N N 308 PRO CG CD sing N N 309 PRO CG HG2 sing N N 310 PRO CG HG3 sing N N 311 PRO CD HD2 sing N N 312 PRO CD HD3 sing N N 313 PRO OXT HXT sing N N 314 SER N CA sing N N 315 SER N H sing N N 316 SER N H2 sing N N 317 SER CA C sing N N 318 SER CA CB sing N N 319 SER CA HA sing N N 320 SER C O doub N N 321 SER C OXT sing N N 322 SER CB OG sing N N 323 SER CB HB2 sing N N 324 SER CB HB3 sing N N 325 SER OG HG sing N N 326 SER OXT HXT sing N N 327 THR N CA sing N N 328 THR N H sing N N 329 THR N H2 sing N N 330 THR CA C sing N N 331 THR CA CB sing N N 332 THR CA HA sing N N 333 THR C O doub N N 334 THR C OXT sing N N 335 THR CB OG1 sing N N 336 THR CB CG2 sing N N 337 THR CB HB sing N N 338 THR OG1 HG1 sing N N 339 THR CG2 HG21 sing N N 340 THR CG2 HG22 sing N N 341 THR CG2 HG23 sing N N 342 THR OXT HXT sing N N 343 TRP N CA sing N N 344 TRP N H sing N N 345 TRP N H2 sing N N 346 TRP CA C sing N N 347 TRP CA CB sing N N 348 TRP CA HA sing N N 349 TRP C O doub N N 350 TRP C OXT sing N N 351 TRP CB CG sing N N 352 TRP CB HB2 sing N N 353 TRP CB HB3 sing N N 354 TRP CG CD1 doub Y N 355 TRP CG CD2 sing Y N 356 TRP CD1 NE1 sing Y N 357 TRP CD1 HD1 sing N N 358 TRP CD2 CE2 doub Y N 359 TRP CD2 CE3 sing Y N 360 TRP NE1 CE2 sing Y N 361 TRP NE1 HE1 sing N N 362 TRP CE2 CZ2 sing Y N 363 TRP CE3 CZ3 doub Y N 364 TRP CE3 HE3 sing N N 365 TRP CZ2 CH2 doub Y N 366 TRP CZ2 HZ2 sing N N 367 TRP CZ3 CH2 sing Y N 368 TRP CZ3 HZ3 sing N N 369 TRP CH2 HH2 sing N N 370 TRP OXT HXT sing N N 371 TYR N CA sing N N 372 TYR N H sing N N 373 TYR N H2 sing N N 374 TYR CA C sing N N 375 TYR CA CB sing N N 376 TYR CA HA sing N N 377 TYR C O doub N N 378 TYR C OXT sing N N 379 TYR CB CG sing N N 380 TYR CB HB2 sing N N 381 TYR CB HB3 sing N N 382 TYR CG CD1 doub Y N 383 TYR CG CD2 sing Y N 384 TYR CD1 CE1 sing Y N 385 TYR CD1 HD1 sing N N 386 TYR CD2 CE2 doub Y N 387 TYR CD2 HD2 sing N N 388 TYR CE1 CZ doub Y N 389 TYR CE1 HE1 sing N N 390 TYR CE2 CZ sing Y N 391 TYR CE2 HE2 sing N N 392 TYR CZ OH sing N N 393 TYR OH HH sing N N 394 TYR OXT HXT sing N N 395 VAL N CA sing N N 396 VAL N H sing N N 397 VAL N H2 sing N N 398 VAL CA C sing N N 399 VAL CA CB sing N N 400 VAL CA HA sing N N 401 VAL C O doub N N 402 VAL C OXT sing N N 403 VAL CB CG1 sing N N 404 VAL CB CG2 sing N N 405 VAL CB HB sing N N 406 VAL CG1 HG11 sing N N 407 VAL CG1 HG12 sing N N 408 VAL CG1 HG13 sing N N 409 VAL CG2 HG21 sing N N 410 VAL CG2 HG22 sing N N 411 VAL CG2 HG23 sing N N 412 VAL OXT HXT sing N N 413 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 3 'MAGNESIUM ION' MG 4 'UNKNOWN ATOM OR ION' UNX 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2Q3F _pdbx_initial_refinement_model.details 'PDB entry 2Q3F' #