data_3LP3 # _entry.id 3LP3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LP3 pdb_00003lp3 10.2210/pdb3lp3/pdb RCSB RCSB057553 ? ? WWPDB D_1000057553 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ncs_dom_lim 8 4 'Structure model' struct_ref_seq_dif 9 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_database_2.pdbx_DOI' 11 4 'Structure model' '_database_2.pdbx_database_accession' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.value' 30 4 'Structure model' '_struct_conn.pdbx_dist_value' 31 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 32 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 39 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 40 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 42 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 43 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 45 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 46 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 47 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 48 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 49 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 50 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 51 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 52 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 53 4 'Structure model' '_struct_ref_seq_dif.details' 54 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 55 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 56 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3LP3 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-02-04 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3LP0 . unspecified PDB 3LP1 . unspecified PDB 3LP2 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yan, Y.' 1 'Munshi, S.K.' 2 'Prasad, G.S.' 3 'Su, H.P.' 4 # _citation.id primary _citation.title 'Structural basis for the inhibition of RNase H activity of HIV-1 reverse transcriptase by RNase H active site-directed inhibitors.' _citation.journal_abbrev J.Virol. _citation.journal_volume 84 _citation.page_first 7625 _citation.page_last 7633 _citation.year 2010 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20484498 _citation.pdbx_database_id_DOI 10.1128/JVI.00353-10 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Su, H.P.' 1 ? primary 'Yan, Y.' 2 ? primary 'Prasad, G.S.' 3 ? primary 'Smith, R.F.' 4 ? primary 'Daniels, C.L.' 5 ? primary 'Abeywickrema, P.D.' 6 ? primary 'Reid, J.C.' 7 ? primary 'Loughran, H.M.' 8 ? primary 'Kornienko, M.' 9 ? primary 'Sharma, S.' 10 ? primary 'Grobler, J.A.' 11 ? primary 'Xu, B.' 12 ? primary 'Sardana, V.' 13 ? primary 'Allison, T.J.' 14 ? primary 'Williams, P.D.' 15 ? primary 'Darke, P.L.' 16 ? primary 'Hazuda, D.J.' 17 ? primary 'Munshi, S.' 18 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man p15 15175.260 2 ? ? 'residues 1014-1149' ? 2 non-polymer syn 'MANGANESE (II) ION' 54.938 4 ? ? ? ? 3 non-polymer syn '3-[4-(diethylamino)phenoxy]-6-(ethoxycarbonyl)-5,8-dihydroxy-7-oxo-7,8-dihydro-1,8-naphthyridin-1-ium' 413.424 2 ? ? ? ? 4 water nat water 18.015 20 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALG IIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALG IIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MANGANESE (II) ION' MN 3 '3-[4-(diethylamino)phenoxy]-6-(ethoxycarbonyl)-5,8-dihydroxy-7-oxo-7,8-dihydro-1,8-naphthyridin-1-ium' LP9 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 TYR n 1 4 GLN n 1 5 LEU n 1 6 GLU n 1 7 LYS n 1 8 GLU n 1 9 PRO n 1 10 ILE n 1 11 VAL n 1 12 GLY n 1 13 ALA n 1 14 GLU n 1 15 THR n 1 16 PHE n 1 17 TYR n 1 18 VAL n 1 19 ASP n 1 20 GLY n 1 21 ALA n 1 22 ALA n 1 23 ASN n 1 24 ARG n 1 25 GLU n 1 26 THR n 1 27 LYS n 1 28 LEU n 1 29 GLY n 1 30 LYS n 1 31 ALA n 1 32 GLY n 1 33 TYR n 1 34 VAL n 1 35 THR n 1 36 ASN n 1 37 LYS n 1 38 GLY n 1 39 ARG n 1 40 GLN n 1 41 LYS n 1 42 VAL n 1 43 VAL n 1 44 PRO n 1 45 LEU n 1 46 THR n 1 47 ASN n 1 48 THR n 1 49 THR n 1 50 ASN n 1 51 GLN n 1 52 LYS n 1 53 THR n 1 54 GLU n 1 55 LEU n 1 56 GLN n 1 57 ALA n 1 58 ILE n 1 59 TYR n 1 60 LEU n 1 61 ALA n 1 62 LEU n 1 63 GLN n 1 64 ASP n 1 65 SER n 1 66 GLY n 1 67 LEU n 1 68 GLU n 1 69 VAL n 1 70 ASN n 1 71 ILE n 1 72 VAL n 1 73 THR n 1 74 ASP n 1 75 SER n 1 76 GLN n 1 77 TYR n 1 78 ALA n 1 79 LEU n 1 80 GLY n 1 81 ILE n 1 82 ILE n 1 83 GLN n 1 84 ALA n 1 85 GLN n 1 86 PRO n 1 87 ASP n 1 88 LYS n 1 89 SER n 1 90 GLU n 1 91 SER n 1 92 GLU n 1 93 LEU n 1 94 VAL n 1 95 ASN n 1 96 GLN n 1 97 ILE n 1 98 ILE n 1 99 GLU n 1 100 GLN n 1 101 LEU n 1 102 ILE n 1 103 LYS n 1 104 LYS n 1 105 GLU n 1 106 LYS n 1 107 VAL n 1 108 TYR n 1 109 LEU n 1 110 ALA n 1 111 TRP n 1 112 VAL n 1 113 PRO n 1 114 ALA n 1 115 HIS n 1 116 LYS n 1 117 GLY n 1 118 ILE n 1 119 GLY n 1 120 GLY n 1 121 ASN n 1 122 GLU n 1 123 GLN n 1 124 VAL n 1 125 ASP n 1 126 LYS n 1 127 LEU n 1 128 VAL n 1 129 SER n 1 130 ALA n 1 131 GLY n 1 132 ILE n 1 133 ARG n 1 134 LYS n 1 135 ILE n 1 136 LEU n 1 137 PHE n 1 138 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HIV-1 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag-pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus type 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LP9 non-polymer . '3-[4-(diethylamino)phenoxy]-6-(ethoxycarbonyl)-5,8-dihydroxy-7-oxo-7,8-dihydro-1,8-naphthyridin-1-ium' ? 'C21 H23 N3 O6' 413.424 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 425 ? ? ? A . n A 1 2 SER 2 426 426 SER SER A . n A 1 3 TYR 3 427 427 TYR TYR A . n A 1 4 GLN 4 428 428 GLN GLN A . n A 1 5 LEU 5 429 429 LEU LEU A . n A 1 6 GLU 6 430 430 GLU GLU A . n A 1 7 LYS 7 431 431 LYS LYS A . n A 1 8 GLU 8 432 432 GLU GLU A . n A 1 9 PRO 9 433 433 PRO PRO A . n A 1 10 ILE 10 434 434 ILE ILE A . n A 1 11 VAL 11 435 435 VAL VAL A . n A 1 12 GLY 12 436 436 GLY GLY A . n A 1 13 ALA 13 437 437 ALA ALA A . n A 1 14 GLU 14 438 438 GLU GLU A . n A 1 15 THR 15 439 439 THR THR A . n A 1 16 PHE 16 440 440 PHE PHE A . n A 1 17 TYR 17 441 441 TYR TYR A . n A 1 18 VAL 18 442 442 VAL VAL A . n A 1 19 ASP 19 443 443 ASP ASP A . n A 1 20 GLY 20 444 444 GLY GLY A . n A 1 21 ALA 21 445 445 ALA ALA A . n A 1 22 ALA 22 446 446 ALA ALA A . n A 1 23 ASN 23 447 447 ASN ASN A . n A 1 24 ARG 24 448 448 ARG ARG A . n A 1 25 GLU 25 449 449 GLU GLU A . n A 1 26 THR 26 450 450 THR THR A . n A 1 27 LYS 27 451 451 LYS LYS A . n A 1 28 LEU 28 452 452 LEU LEU A . n A 1 29 GLY 29 453 453 GLY GLY A . n A 1 30 LYS 30 454 454 LYS LYS A . n A 1 31 ALA 31 455 455 ALA ALA A . n A 1 32 GLY 32 456 456 GLY GLY A . n A 1 33 TYR 33 457 457 TYR TYR A . n A 1 34 VAL 34 458 458 VAL VAL A . n A 1 35 THR 35 459 459 THR THR A . n A 1 36 ASN 36 460 460 ASN ASN A . n A 1 37 LYS 37 461 461 LYS LYS A . n A 1 38 GLY 38 462 462 GLY GLY A . n A 1 39 ARG 39 463 463 ARG ARG A . n A 1 40 GLN 40 464 464 GLN GLN A . n A 1 41 LYS 41 465 465 LYS LYS A . n A 1 42 VAL 42 466 466 VAL VAL A . n A 1 43 VAL 43 467 467 VAL VAL A . n A 1 44 PRO 44 468 468 PRO PRO A . n A 1 45 LEU 45 469 469 LEU LEU A . n A 1 46 THR 46 470 470 THR THR A . n A 1 47 ASN 47 471 471 ASN ASN A . n A 1 48 THR 48 472 472 THR THR A . n A 1 49 THR 49 473 473 THR THR A . n A 1 50 ASN 50 474 474 ASN ASN A . n A 1 51 GLN 51 475 475 GLN GLN A . n A 1 52 LYS 52 476 476 LYS LYS A . n A 1 53 THR 53 477 477 THR THR A . n A 1 54 GLU 54 478 478 GLU GLU A . n A 1 55 LEU 55 479 479 LEU LEU A . n A 1 56 GLN 56 480 480 GLN GLN A . n A 1 57 ALA 57 481 481 ALA ALA A . n A 1 58 ILE 58 482 482 ILE ILE A . n A 1 59 TYR 59 483 483 TYR TYR A . n A 1 60 LEU 60 484 484 LEU LEU A . n A 1 61 ALA 61 485 485 ALA ALA A . n A 1 62 LEU 62 486 486 LEU LEU A . n A 1 63 GLN 63 487 487 GLN GLN A . n A 1 64 ASP 64 488 488 ASP ASP A . n A 1 65 SER 65 489 489 SER SER A . n A 1 66 GLY 66 490 490 GLY GLY A . n A 1 67 LEU 67 491 491 LEU LEU A . n A 1 68 GLU 68 492 492 GLU GLU A . n A 1 69 VAL 69 493 493 VAL VAL A . n A 1 70 ASN 70 494 494 ASN ASN A . n A 1 71 ILE 71 495 495 ILE ILE A . n A 1 72 VAL 72 496 496 VAL VAL A . n A 1 73 THR 73 497 497 THR THR A . n A 1 74 ASP 74 498 498 ASP ASP A . n A 1 75 SER 75 499 499 SER SER A . n A 1 76 GLN 76 500 500 GLN GLN A . n A 1 77 TYR 77 501 501 TYR TYR A . n A 1 78 ALA 78 502 502 ALA ALA A . n A 1 79 LEU 79 503 503 LEU LEU A . n A 1 80 GLY 80 504 504 GLY GLY A . n A 1 81 ILE 81 505 505 ILE ILE A . n A 1 82 ILE 82 506 506 ILE ILE A . n A 1 83 GLN 83 507 507 GLN GLN A . n A 1 84 ALA 84 508 508 ALA ALA A . n A 1 85 GLN 85 509 509 GLN GLN A . n A 1 86 PRO 86 510 510 PRO PRO A . n A 1 87 ASP 87 511 511 ASP ASP A . n A 1 88 LYS 88 512 512 LYS LYS A . n A 1 89 SER 89 513 513 SER SER A . n A 1 90 GLU 90 514 514 GLU GLU A . n A 1 91 SER 91 515 515 SER SER A . n A 1 92 GLU 92 516 516 GLU GLU A . n A 1 93 LEU 93 517 517 LEU LEU A . n A 1 94 VAL 94 518 518 VAL VAL A . n A 1 95 ASN 95 519 519 ASN ASN A . n A 1 96 GLN 96 520 520 GLN GLN A . n A 1 97 ILE 97 521 521 ILE ILE A . n A 1 98 ILE 98 522 522 ILE ILE A . n A 1 99 GLU 99 523 523 GLU GLU A . n A 1 100 GLN 100 524 524 GLN GLN A . n A 1 101 LEU 101 525 525 LEU LEU A . n A 1 102 ILE 102 526 526 ILE ILE A . n A 1 103 LYS 103 527 527 LYS LYS A . n A 1 104 LYS 104 528 528 LYS LYS A . n A 1 105 GLU 105 529 529 GLU GLU A . n A 1 106 LYS 106 530 530 LYS LYS A . n A 1 107 VAL 107 531 531 VAL VAL A . n A 1 108 TYR 108 532 532 TYR TYR A . n A 1 109 LEU 109 533 533 LEU LEU A . n A 1 110 ALA 110 534 534 ALA ALA A . n A 1 111 TRP 111 535 535 TRP TRP A . n A 1 112 VAL 112 536 536 VAL VAL A . n A 1 113 PRO 113 537 537 PRO PRO A . n A 1 114 ALA 114 538 538 ALA ALA A . n A 1 115 HIS 115 539 539 HIS HIS A . n A 1 116 LYS 116 540 540 LYS LYS A . n A 1 117 GLY 117 541 541 GLY GLY A . n A 1 118 ILE 118 542 542 ILE ILE A . n A 1 119 GLY 119 543 543 GLY GLY A . n A 1 120 GLY 120 544 544 GLY GLY A . n A 1 121 ASN 121 545 545 ASN ASN A . n A 1 122 GLU 122 546 546 GLU GLU A . n A 1 123 GLN 123 547 547 GLN GLN A . n A 1 124 VAL 124 548 548 VAL VAL A . n A 1 125 ASP 125 549 549 ASP ASP A . n A 1 126 LYS 126 550 550 LYS LYS A . n A 1 127 LEU 127 551 551 LEU LEU A . n A 1 128 VAL 128 552 552 VAL VAL A . n A 1 129 SER 129 553 553 SER SER A . n A 1 130 ALA 130 554 554 ALA ALA A . n A 1 131 GLY 131 555 555 GLY GLY A . n A 1 132 ILE 132 556 556 ILE ILE A . n A 1 133 ARG 133 557 ? ? ? A . n A 1 134 LYS 134 558 ? ? ? A . n A 1 135 ILE 135 559 ? ? ? A . n A 1 136 LEU 136 560 ? ? ? A . n A 1 137 PHE 137 561 ? ? ? A . n A 1 138 LEU 138 562 ? ? ? A . n B 1 1 GLY 1 425 ? ? ? B . n B 1 2 SER 2 426 426 SER SER B . n B 1 3 TYR 3 427 427 TYR TYR B . n B 1 4 GLN 4 428 428 GLN GLN B . n B 1 5 LEU 5 429 429 LEU LEU B . n B 1 6 GLU 6 430 430 GLU GLU B . n B 1 7 LYS 7 431 431 LYS LYS B . n B 1 8 GLU 8 432 432 GLU GLU B . n B 1 9 PRO 9 433 433 PRO PRO B . n B 1 10 ILE 10 434 434 ILE ILE B . n B 1 11 VAL 11 435 435 VAL VAL B . n B 1 12 GLY 12 436 436 GLY GLY B . n B 1 13 ALA 13 437 437 ALA ALA B . n B 1 14 GLU 14 438 438 GLU GLU B . n B 1 15 THR 15 439 439 THR THR B . n B 1 16 PHE 16 440 440 PHE PHE B . n B 1 17 TYR 17 441 441 TYR TYR B . n B 1 18 VAL 18 442 442 VAL VAL B . n B 1 19 ASP 19 443 443 ASP ASP B . n B 1 20 GLY 20 444 444 GLY GLY B . n B 1 21 ALA 21 445 445 ALA ALA B . n B 1 22 ALA 22 446 446 ALA ALA B . n B 1 23 ASN 23 447 447 ASN ASN B . n B 1 24 ARG 24 448 448 ARG ARG B . n B 1 25 GLU 25 449 449 GLU GLU B . n B 1 26 THR 26 450 450 THR THR B . n B 1 27 LYS 27 451 451 LYS LYS B . n B 1 28 LEU 28 452 452 LEU LEU B . n B 1 29 GLY 29 453 453 GLY GLY B . n B 1 30 LYS 30 454 454 LYS LYS B . n B 1 31 ALA 31 455 455 ALA ALA B . n B 1 32 GLY 32 456 456 GLY GLY B . n B 1 33 TYR 33 457 457 TYR TYR B . n B 1 34 VAL 34 458 458 VAL VAL B . n B 1 35 THR 35 459 459 THR THR B . n B 1 36 ASN 36 460 460 ASN ASN B . n B 1 37 LYS 37 461 461 LYS LYS B . n B 1 38 GLY 38 462 462 GLY GLY B . n B 1 39 ARG 39 463 463 ARG ARG B . n B 1 40 GLN 40 464 464 GLN GLN B . n B 1 41 LYS 41 465 465 LYS LYS B . n B 1 42 VAL 42 466 466 VAL VAL B . n B 1 43 VAL 43 467 467 VAL VAL B . n B 1 44 PRO 44 468 468 PRO PRO B . n B 1 45 LEU 45 469 469 LEU LEU B . n B 1 46 THR 46 470 470 THR THR B . n B 1 47 ASN 47 471 471 ASN ASN B . n B 1 48 THR 48 472 472 THR THR B . n B 1 49 THR 49 473 473 THR THR B . n B 1 50 ASN 50 474 474 ASN ASN B . n B 1 51 GLN 51 475 475 GLN GLN B . n B 1 52 LYS 52 476 476 LYS LYS B . n B 1 53 THR 53 477 477 THR THR B . n B 1 54 GLU 54 478 478 GLU GLU B . n B 1 55 LEU 55 479 479 LEU LEU B . n B 1 56 GLN 56 480 480 GLN GLN B . n B 1 57 ALA 57 481 481 ALA ALA B . n B 1 58 ILE 58 482 482 ILE ILE B . n B 1 59 TYR 59 483 483 TYR TYR B . n B 1 60 LEU 60 484 484 LEU LEU B . n B 1 61 ALA 61 485 485 ALA ALA B . n B 1 62 LEU 62 486 486 LEU LEU B . n B 1 63 GLN 63 487 487 GLN GLN B . n B 1 64 ASP 64 488 488 ASP ASP B . n B 1 65 SER 65 489 489 SER SER B . n B 1 66 GLY 66 490 490 GLY GLY B . n B 1 67 LEU 67 491 491 LEU LEU B . n B 1 68 GLU 68 492 492 GLU GLU B . n B 1 69 VAL 69 493 493 VAL VAL B . n B 1 70 ASN 70 494 494 ASN ASN B . n B 1 71 ILE 71 495 495 ILE ILE B . n B 1 72 VAL 72 496 496 VAL VAL B . n B 1 73 THR 73 497 497 THR THR B . n B 1 74 ASP 74 498 498 ASP ASP B . n B 1 75 SER 75 499 499 SER SER B . n B 1 76 GLN 76 500 500 GLN GLN B . n B 1 77 TYR 77 501 501 TYR TYR B . n B 1 78 ALA 78 502 502 ALA ALA B . n B 1 79 LEU 79 503 503 LEU LEU B . n B 1 80 GLY 80 504 504 GLY GLY B . n B 1 81 ILE 81 505 505 ILE ILE B . n B 1 82 ILE 82 506 506 ILE ILE B . n B 1 83 GLN 83 507 507 GLN GLN B . n B 1 84 ALA 84 508 508 ALA ALA B . n B 1 85 GLN 85 509 509 GLN GLN B . n B 1 86 PRO 86 510 510 PRO PRO B . n B 1 87 ASP 87 511 511 ASP ASP B . n B 1 88 LYS 88 512 512 LYS LYS B . n B 1 89 SER 89 513 513 SER SER B . n B 1 90 GLU 90 514 514 GLU GLU B . n B 1 91 SER 91 515 515 SER SER B . n B 1 92 GLU 92 516 516 GLU GLU B . n B 1 93 LEU 93 517 517 LEU LEU B . n B 1 94 VAL 94 518 518 VAL VAL B . n B 1 95 ASN 95 519 519 ASN ASN B . n B 1 96 GLN 96 520 520 GLN GLN B . n B 1 97 ILE 97 521 521 ILE ILE B . n B 1 98 ILE 98 522 522 ILE ILE B . n B 1 99 GLU 99 523 523 GLU GLU B . n B 1 100 GLN 100 524 524 GLN GLN B . n B 1 101 LEU 101 525 525 LEU LEU B . n B 1 102 ILE 102 526 526 ILE ILE B . n B 1 103 LYS 103 527 527 LYS LYS B . n B 1 104 LYS 104 528 528 LYS LYS B . n B 1 105 GLU 105 529 529 GLU GLU B . n B 1 106 LYS 106 530 530 LYS LYS B . n B 1 107 VAL 107 531 531 VAL VAL B . n B 1 108 TYR 108 532 532 TYR TYR B . n B 1 109 LEU 109 533 533 LEU LEU B . n B 1 110 ALA 110 534 534 ALA ALA B . n B 1 111 TRP 111 535 535 TRP TRP B . n B 1 112 VAL 112 536 536 VAL VAL B . n B 1 113 PRO 113 537 537 PRO PRO B . n B 1 114 ALA 114 538 538 ALA ALA B . n B 1 115 HIS 115 539 539 HIS HIS B . n B 1 116 LYS 116 540 540 LYS LYS B . n B 1 117 GLY 117 541 541 GLY GLY B . n B 1 118 ILE 118 542 542 ILE ILE B . n B 1 119 GLY 119 543 543 GLY GLY B . n B 1 120 GLY 120 544 544 GLY GLY B . n B 1 121 ASN 121 545 545 ASN ASN B . n B 1 122 GLU 122 546 546 GLU GLU B . n B 1 123 GLN 123 547 547 GLN GLN B . n B 1 124 VAL 124 548 548 VAL VAL B . n B 1 125 ASP 125 549 549 ASP ASP B . n B 1 126 LYS 126 550 550 LYS LYS B . n B 1 127 LEU 127 551 551 LEU LEU B . n B 1 128 VAL 128 552 552 VAL VAL B . n B 1 129 SER 129 553 553 SER SER B . n B 1 130 ALA 130 554 554 ALA ALA B . n B 1 131 GLY 131 555 555 GLY GLY B . n B 1 132 ILE 132 556 556 ILE ILE B . n B 1 133 ARG 133 557 ? ? ? B . n B 1 134 LYS 134 558 ? ? ? B . n B 1 135 ILE 135 559 ? ? ? B . n B 1 136 LEU 136 560 ? ? ? B . n B 1 137 PHE 137 561 ? ? ? B . n B 1 138 LEU 138 562 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN 1 1 1 MN MN A . D 2 MN 1 2 2 MN MN A . E 3 LP9 1 3 3 LP9 LP9 A . F 3 LP9 1 1 1 LP9 LP9 B . G 2 MN 1 2 2 MN MN B . H 2 MN 1 3 3 MN MN B . I 4 HOH 1 4 4 HOH HOH A . I 4 HOH 2 6 6 HOH HOH A . I 4 HOH 3 7 7 HOH HOH A . I 4 HOH 4 10 10 HOH HOH A . I 4 HOH 5 11 11 HOH HOH A . I 4 HOH 6 13 13 HOH HOH A . I 4 HOH 7 16 16 HOH HOH A . I 4 HOH 8 563 1 HOH HOH A . I 4 HOH 9 564 3 HOH HOH A . J 4 HOH 1 4 4 HOH HOH B . J 4 HOH 2 5 5 HOH HOH B . J 4 HOH 3 8 8 HOH HOH B . J 4 HOH 4 9 9 HOH HOH B . J 4 HOH 5 12 12 HOH HOH B . J 4 HOH 6 14 14 HOH HOH B . J 4 HOH 7 15 15 HOH HOH B . J 4 HOH 8 17 17 HOH HOH B . J 4 HOH 9 18 18 HOH HOH B . J 4 HOH 10 563 2 HOH HOH B . J 4 HOH 11 564 5 HOH HOH B . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.entry_id 3LP3 _cell.length_a 51.256 _cell.length_b 51.256 _cell.length_c 112.773 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LP3 _symmetry.space_group_name_H-M 'P 31' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3LP3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.82 _exptl_crystal.density_percent_sol 56.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'hanging drop' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M Sodium citrate pH 5.0, 15-20% PEG 8000, hanging drop, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'Saturn 944+' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3LP3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.800 _reflns.number_obs 8172 _reflns.number_all ? _reflns.percent_possible_obs 100.000 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.800 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.80 2.90 100.00 0.359 ? ? 5.70 ? ? ? ? ? ? ? 1 2.90 3.02 100.00 0.296 ? ? 5.70 ? ? ? ? ? ? ? 2 3.02 3.15 100.00 0.216 ? ? 5.80 ? ? ? ? ? ? ? 3 3.15 3.32 100.00 0.159 ? ? 5.80 ? ? ? ? ? ? ? 4 3.32 3.53 100.00 0.127 ? ? 5.80 ? ? ? ? ? ? ? 5 3.53 3.80 100.00 0.103 ? ? 5.80 ? ? ? ? ? ? ? 6 3.80 4.18 100.00 0.081 ? ? 5.80 ? ? ? ? ? ? ? 7 4.18 4.79 100.00 0.069 ? ? 5.80 ? ? ? ? ? ? ? 8 4.79 6.03 100.00 0.068 ? ? 5.90 ? ? ? ? ? ? ? 9 6.03 50.00 99.50 0.055 ? ? 5.80 ? ? ? ? ? ? ? 10 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3LP3 _refine.ls_number_reflns_obs 7751 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.88 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.89 _refine.ls_R_factor_obs 0.23227 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22947 _refine.ls_R_factor_R_free 0.28828 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 387 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.902 _refine.correlation_coeff_Fo_to_Fc_free 0.852 _refine.B_iso_mean 37.307 _refine.aniso_B[1][1] -0.17 _refine.aniso_B[2][2] -0.17 _refine.aniso_B[3][3] 0.25 _refine.aniso_B[1][2] -0.08 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.428 _refine.overall_SU_ML 0.346 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 17.816 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2020 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 64 _refine_hist.number_atoms_solvent 20 _refine_hist.number_atoms_total 2104 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 34.88 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 2110 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.029 2.004 ? 2860 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.764 5.000 ? 260 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.386 27.111 ? 90 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.695 15.000 ? 378 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.577 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.064 0.200 ? 324 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 1568 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.183 0.200 ? 935 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.292 0.200 ? 1451 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.100 0.200 ? 66 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.019 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.184 0.200 ? 41 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.116 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.379 1.500 ? 1360 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.693 2.000 ? 2104 'X-RAY DIFFRACTION' ? r_scbond_it 0.427 3.000 ? 912 'X-RAY DIFFRACTION' ? r_scangle_it 0.764 4.500 ? 756 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 1010 0.37 0.50 'medium positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 1010 0.15 2.00 'medium thermal' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.801 _refine_ls_shell.d_res_low 2.874 _refine_ls_shell.number_reflns_R_work 576 _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.percent_reflns_obs 99.51 _refine_ls_shell.R_factor_R_free 0.425 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 32 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A SER 2 . A ILE 132 . A SER 426 A ILE 556 4 ? 1 2 1 B SER 2 . B ILE 132 . B SER 426 B ILE 556 4 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3LP3 _struct.title 'p15 HIV RNaseH domain with inhibitor MK3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LP3 _struct_keywords.text ;Reverse Transcriptase, RNase H, HIV, AIDS, Capsid maturation, DNA integration, DNA-directed DNA polymerase, Endonuclease, Host cytoplasm, Host nucleus, Multifunctional enzyme, RNA-binding, RNA-directed DNA polymerase, Viral nucleoprotein, Virion, VIRAL PROTEIN ; _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 2 ? H N N 2 ? I N N 4 ? J N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1LW _struct_ref.pdbx_db_accession P0C6F2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGII QAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFL ; _struct_ref.pdbx_align_begin 1014 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LP3 A 3 ? 138 ? P0C6F2 1014 ? 1149 ? 427 562 2 1 3LP3 B 3 ? 138 ? P0C6F2 1014 ? 1149 ? 427 562 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LP3 GLY A 1 ? UNP P0C6F2 ? ? insertion 425 1 1 3LP3 SER A 2 ? UNP P0C6F2 ? ? insertion 426 2 2 3LP3 GLY B 1 ? UNP P0C6F2 ? ? insertion 425 3 2 3LP3 SER B 2 ? UNP P0C6F2 ? ? insertion 426 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1900 ? 3 MORE -30 ? 3 'SSA (A^2)' 12830 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,I 2 1 B,F,G,H,J 3 1 A,C,D,E,I 3 2 B,F,G,H,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_445 x-1,y-1,z 1.0000000000 0.0000000000 0.0000000000 -25.6280000000 0.0000000000 1.0000000000 0.0000000000 -44.3889980964 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'he biological unit is a monomer. There are 2 biological units in the asymmetric unit' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 49 ? ASP A 64 ? THR A 473 ASP A 488 1 ? 16 HELX_P HELX_P2 2 SER A 75 ? ALA A 84 ? SER A 499 ALA A 508 1 ? 10 HELX_P HELX_P3 3 SER A 91 ? LYS A 103 ? SER A 515 LYS A 527 1 ? 13 HELX_P HELX_P4 4 ILE A 118 ? ALA A 130 ? ILE A 542 ALA A 554 1 ? 13 HELX_P HELX_P5 5 THR B 49 ? ASP B 64 ? THR B 473 ASP B 488 1 ? 16 HELX_P HELX_P6 6 SER B 75 ? GLN B 85 ? SER B 499 GLN B 509 1 ? 11 HELX_P HELX_P7 7 SER B 91 ? LYS B 104 ? SER B 515 LYS B 528 1 ? 14 HELX_P HELX_P8 8 ILE B 118 ? SER B 129 ? ILE B 542 SER B 553 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C MN . MN ? ? ? 1_555 E LP9 . O11 ? ? A MN 1 A LP9 3 1_555 ? ? ? ? ? ? ? 2.016 ? ? metalc2 metalc ? ? C MN . MN ? ? ? 1_555 E LP9 . O12 ? ? A MN 1 A LP9 3 1_555 ? ? ? ? ? ? ? 2.730 ? ? metalc3 metalc ? ? C MN . MN ? ? ? 1_555 I HOH . O ? ? A MN 1 A HOH 4 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc4 metalc ? ? C MN . MN ? ? ? 1_555 A ASP 19 OD2 ? ? A MN 1 A ASP 443 1_555 ? ? ? ? ? ? ? 2.464 ? ? metalc5 metalc ? ? C MN . MN ? ? ? 1_555 A ASP 125 OD2 ? ? A MN 1 A ASP 549 1_555 ? ? ? ? ? ? ? 1.941 ? ? metalc6 metalc ? ? D MN . MN ? ? ? 1_555 E LP9 . O12 ? ? A MN 2 A LP9 3 1_555 ? ? ? ? ? ? ? 1.720 ? ? metalc7 metalc ? ? D MN . MN ? ? ? 1_555 A ASP 19 OD1 ? ? A MN 2 A ASP 443 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc8 metalc ? ? D MN . MN ? ? ? 1_555 A GLU 54 OE2 ? ? A MN 2 A GLU 478 1_555 ? ? ? ? ? ? ? 1.922 ? ? metalc9 metalc ? ? D MN . MN ? ? ? 1_555 A ASP 74 OD1 ? ? A MN 2 A ASP 498 1_555 ? ? ? ? ? ? ? 1.975 ? ? metalc10 metalc ? ? F LP9 . O12 ? ? ? 1_555 G MN . MN ? ? B LP9 1 B MN 2 1_555 ? ? ? ? ? ? ? 2.107 ? ? metalc11 metalc ? ? F LP9 . O11 ? ? ? 1_555 G MN . MN ? ? B LP9 1 B MN 2 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc12 metalc ? ? F LP9 . O12 ? ? ? 1_555 H MN . MN ? ? B LP9 1 B MN 3 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc13 metalc ? ? F LP9 . N ? ? ? 1_555 H MN . MN ? ? B LP9 1 B MN 3 1_555 ? ? ? ? ? ? ? 2.434 ? ? metalc14 metalc ? ? G MN . MN ? ? ? 1_555 B ASP 19 OD1 ? ? B MN 2 B ASP 443 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc15 metalc ? ? G MN . MN ? ? ? 1_555 B ASP 125 OD2 ? ? B MN 2 B ASP 549 1_555 ? ? ? ? ? ? ? 1.928 ? ? metalc16 metalc ? ? H MN . MN ? ? ? 1_555 B ASP 19 OD2 ? ? B MN 3 B ASP 443 1_555 ? ? ? ? ? ? ? 2.221 ? ? metalc17 metalc ? ? H MN . MN ? ? ? 1_555 B GLU 54 OE1 ? ? B MN 3 B GLU 478 1_555 ? ? ? ? ? ? ? 2.067 ? ? metalc18 metalc ? ? H MN . MN ? ? ? 1_555 B ASP 74 OD2 ? ? B MN 3 B ASP 498 1_555 ? ? ? ? ? ? ? 2.117 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O11 ? E LP9 . ? A LP9 3 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 O12 ? E LP9 . ? A LP9 3 ? 1_555 68.2 ? 2 O11 ? E LP9 . ? A LP9 3 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 O ? I HOH . ? A HOH 4 ? 1_555 79.0 ? 3 O12 ? E LP9 . ? A LP9 3 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 O ? I HOH . ? A HOH 4 ? 1_555 73.8 ? 4 O11 ? E LP9 . ? A LP9 3 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 OD2 ? A ASP 19 ? A ASP 443 ? 1_555 147.5 ? 5 O12 ? E LP9 . ? A LP9 3 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 OD2 ? A ASP 19 ? A ASP 443 ? 1_555 97.5 ? 6 O ? I HOH . ? A HOH 4 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 OD2 ? A ASP 19 ? A ASP 443 ? 1_555 68.9 ? 7 O11 ? E LP9 . ? A LP9 3 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 OD2 ? A ASP 125 ? A ASP 549 ? 1_555 91.5 ? 8 O12 ? E LP9 . ? A LP9 3 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 OD2 ? A ASP 125 ? A ASP 549 ? 1_555 147.6 ? 9 O ? I HOH . ? A HOH 4 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 OD2 ? A ASP 125 ? A ASP 549 ? 1_555 77.8 ? 10 OD2 ? A ASP 19 ? A ASP 443 ? 1_555 MN ? C MN . ? A MN 1 ? 1_555 OD2 ? A ASP 125 ? A ASP 549 ? 1_555 86.3 ? 11 O12 ? E LP9 . ? A LP9 3 ? 1_555 MN ? D MN . ? A MN 2 ? 1_555 OD1 ? A ASP 19 ? A ASP 443 ? 1_555 108.7 ? 12 O12 ? E LP9 . ? A LP9 3 ? 1_555 MN ? D MN . ? A MN 2 ? 1_555 OE2 ? A GLU 54 ? A GLU 478 ? 1_555 140.2 ? 13 OD1 ? A ASP 19 ? A ASP 443 ? 1_555 MN ? D MN . ? A MN 2 ? 1_555 OE2 ? A GLU 54 ? A GLU 478 ? 1_555 88.7 ? 14 O12 ? E LP9 . ? A LP9 3 ? 1_555 MN ? D MN . ? A MN 2 ? 1_555 OD1 ? A ASP 74 ? A ASP 498 ? 1_555 102.4 ? 15 OD1 ? A ASP 19 ? A ASP 443 ? 1_555 MN ? D MN . ? A MN 2 ? 1_555 OD1 ? A ASP 74 ? A ASP 498 ? 1_555 115.1 ? 16 OE2 ? A GLU 54 ? A GLU 478 ? 1_555 MN ? D MN . ? A MN 2 ? 1_555 OD1 ? A ASP 74 ? A ASP 498 ? 1_555 101.7 ? 17 O12 ? F LP9 . ? B LP9 1 ? 1_555 MN ? G MN . ? B MN 2 ? 1_555 O11 ? F LP9 . ? B LP9 1 ? 1_555 75.3 ? 18 O12 ? F LP9 . ? B LP9 1 ? 1_555 MN ? G MN . ? B MN 2 ? 1_555 OD1 ? B ASP 19 ? B ASP 443 ? 1_555 101.2 ? 19 O11 ? F LP9 . ? B LP9 1 ? 1_555 MN ? G MN . ? B MN 2 ? 1_555 OD1 ? B ASP 19 ? B ASP 443 ? 1_555 169.6 ? 20 O12 ? F LP9 . ? B LP9 1 ? 1_555 MN ? G MN . ? B MN 2 ? 1_555 OD2 ? B ASP 125 ? B ASP 549 ? 1_555 152.7 ? 21 O11 ? F LP9 . ? B LP9 1 ? 1_555 MN ? G MN . ? B MN 2 ? 1_555 OD2 ? B ASP 125 ? B ASP 549 ? 1_555 85.1 ? 22 OD1 ? B ASP 19 ? B ASP 443 ? 1_555 MN ? G MN . ? B MN 2 ? 1_555 OD2 ? B ASP 125 ? B ASP 549 ? 1_555 94.6 ? 23 O12 ? F LP9 . ? B LP9 1 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 N ? F LP9 . ? B LP9 1 ? 1_555 70.0 ? 24 O12 ? F LP9 . ? B LP9 1 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OD2 ? B ASP 19 ? B ASP 443 ? 1_555 94.6 ? 25 N ? F LP9 . ? B LP9 1 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OD2 ? B ASP 19 ? B ASP 443 ? 1_555 162.3 ? 26 O12 ? F LP9 . ? B LP9 1 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OE1 ? B GLU 54 ? B GLU 478 ? 1_555 126.1 ? 27 N ? F LP9 . ? B LP9 1 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OE1 ? B GLU 54 ? B GLU 478 ? 1_555 89.7 ? 28 OD2 ? B ASP 19 ? B ASP 443 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OE1 ? B GLU 54 ? B GLU 478 ? 1_555 92.9 ? 29 O12 ? F LP9 . ? B LP9 1 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OD2 ? B ASP 74 ? B ASP 498 ? 1_555 121.5 ? 30 N ? F LP9 . ? B LP9 1 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OD2 ? B ASP 74 ? B ASP 498 ? 1_555 102.4 ? 31 OD2 ? B ASP 19 ? B ASP 443 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OD2 ? B ASP 74 ? B ASP 498 ? 1_555 93.0 ? 32 OE1 ? B GLU 54 ? B GLU 478 ? 1_555 MN ? H MN . ? B MN 3 ? 1_555 OD2 ? B ASP 74 ? B ASP 498 ? 1_555 111.2 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? parallel A 9 10 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 106 ? TRP A 111 ? LYS A 530 TRP A 535 A 2 GLU A 68 ? THR A 73 ? GLU A 492 THR A 497 A 3 GLU A 14 ? ALA A 22 ? GLU A 438 ALA A 446 A 4 GLY A 29 ? THR A 35 ? GLY A 453 THR A 459 A 5 GLN A 40 ? LEU A 45 ? GLN A 464 LEU A 469 A 6 GLN B 40 ? LEU B 45 ? GLN B 464 LEU B 469 A 7 GLY B 29 ? THR B 35 ? GLY B 453 THR B 459 A 8 GLU B 14 ? ALA B 22 ? GLU B 438 ALA B 446 A 9 GLU B 68 ? THR B 73 ? GLU B 492 THR B 497 A 10 LYS B 106 ? TRP B 111 ? LYS B 530 TRP B 535 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 108 ? O TYR A 532 N ILE A 71 ? N ILE A 495 A 2 3 O ASN A 70 ? O ASN A 494 N PHE A 16 ? N PHE A 440 A 3 4 N TYR A 17 ? N TYR A 441 O VAL A 34 ? O VAL A 458 A 4 5 N ALA A 31 ? N ALA A 455 O VAL A 43 ? O VAL A 467 A 5 6 N VAL A 42 ? N VAL A 466 O GLN B 40 ? O GLN B 464 A 6 7 O LEU B 45 ? O LEU B 469 N GLY B 29 ? N GLY B 453 A 7 8 O VAL B 34 ? O VAL B 458 N TYR B 17 ? N TYR B 441 A 8 9 N PHE B 16 ? N PHE B 440 O ASN B 70 ? O ASN B 494 A 9 10 N ILE B 71 ? N ILE B 495 O ALA B 110 ? O ALA B 534 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 1 ? 5 'BINDING SITE FOR RESIDUE MN A 1' AC2 Software A MN 2 ? 5 'BINDING SITE FOR RESIDUE MN A 2' AC3 Software A LP9 3 ? 12 'BINDING SITE FOR RESIDUE LP9 A 3' AC4 Software B LP9 1 ? 10 'BINDING SITE FOR RESIDUE LP9 B 1' AC5 Software B MN 2 ? 4 'BINDING SITE FOR RESIDUE MN B 2' AC6 Software B MN 3 ? 4 'BINDING SITE FOR RESIDUE MN B 3' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 MN D . ? MN A 2 . ? 1_555 ? 2 AC1 5 LP9 E . ? LP9 A 3 . ? 1_555 ? 3 AC1 5 HOH I . ? HOH A 4 . ? 1_555 ? 4 AC1 5 ASP A 19 ? ASP A 443 . ? 1_555 ? 5 AC1 5 ASP A 125 ? ASP A 549 . ? 1_555 ? 6 AC2 5 MN C . ? MN A 1 . ? 1_555 ? 7 AC2 5 LP9 E . ? LP9 A 3 . ? 1_555 ? 8 AC2 5 ASP A 19 ? ASP A 443 . ? 1_555 ? 9 AC2 5 GLU A 54 ? GLU A 478 . ? 1_555 ? 10 AC2 5 ASP A 74 ? ASP A 498 . ? 1_555 ? 11 AC3 12 MN C . ? MN A 1 . ? 1_555 ? 12 AC3 12 MN D . ? MN A 2 . ? 1_555 ? 13 AC3 12 HOH I . ? HOH A 4 . ? 1_555 ? 14 AC3 12 ASP A 19 ? ASP A 443 . ? 1_555 ? 15 AC3 12 GLN A 51 ? GLN A 475 . ? 1_555 ? 16 AC3 12 GLU A 54 ? GLU A 478 . ? 1_555 ? 17 AC3 12 ASP A 74 ? ASP A 498 . ? 1_555 ? 18 AC3 12 HIS A 115 ? HIS A 539 . ? 1_555 ? 19 AC3 12 ASP A 125 ? ASP A 549 . ? 1_555 ? 20 AC3 12 SER A 129 ? SER A 553 . ? 1_555 ? 21 AC3 12 GLN B 76 ? GLN B 500 . ? 1_445 ? 22 AC3 12 TRP B 111 ? TRP B 535 . ? 1_445 ? 23 AC4 10 GLN A 76 ? GLN A 500 . ? 1_665 ? 24 AC4 10 MN G . ? MN B 2 . ? 1_555 ? 25 AC4 10 MN H . ? MN B 3 . ? 1_555 ? 26 AC4 10 ASP B 19 ? ASP B 443 . ? 1_555 ? 27 AC4 10 ARG B 24 ? ARG B 448 . ? 1_555 ? 28 AC4 10 GLN B 51 ? GLN B 475 . ? 1_555 ? 29 AC4 10 GLU B 54 ? GLU B 478 . ? 1_555 ? 30 AC4 10 ASP B 74 ? ASP B 498 . ? 1_555 ? 31 AC4 10 HIS B 115 ? HIS B 539 . ? 1_555 ? 32 AC4 10 ASP B 125 ? ASP B 549 . ? 1_555 ? 33 AC5 4 LP9 F . ? LP9 B 1 . ? 1_555 ? 34 AC5 4 HOH J . ? HOH B 5 . ? 1_555 ? 35 AC5 4 ASP B 19 ? ASP B 443 . ? 1_555 ? 36 AC5 4 ASP B 125 ? ASP B 549 . ? 1_555 ? 37 AC6 4 LP9 F . ? LP9 B 1 . ? 1_555 ? 38 AC6 4 ASP B 19 ? ASP B 443 . ? 1_555 ? 39 AC6 4 GLU B 54 ? GLU B 478 . ? 1_555 ? 40 AC6 4 ASP B 74 ? ASP B 498 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 471 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 50.69 _pdbx_validate_torsion.psi 78.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 425 ? A GLY 1 2 1 Y 1 A ARG 557 ? A ARG 133 3 1 Y 1 A LYS 558 ? A LYS 134 4 1 Y 1 A ILE 559 ? A ILE 135 5 1 Y 1 A LEU 560 ? A LEU 136 6 1 Y 1 A PHE 561 ? A PHE 137 7 1 Y 1 A LEU 562 ? A LEU 138 8 1 Y 1 B GLY 425 ? B GLY 1 9 1 Y 1 B ARG 557 ? B ARG 133 10 1 Y 1 B LYS 558 ? B LYS 134 11 1 Y 1 B ILE 559 ? B ILE 135 12 1 Y 1 B LEU 560 ? B LEU 136 13 1 Y 1 B PHE 561 ? B PHE 137 14 1 Y 1 B LEU 562 ? B LEU 138 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LP9 C C Y N 191 LP9 N N Y N 192 LP9 O O N N 193 LP9 C1 C Y N 194 LP9 C2 C Y N 195 LP9 C3 C Y N 196 LP9 C4 C Y N 197 LP9 N5 N N N 198 LP9 C6 C N N 199 LP9 C7 C N N 200 LP9 C8 C N N 201 LP9 C9 C N N 202 LP9 O10 O N N 203 LP9 O11 O N N 204 LP9 O12 O N N 205 LP9 O13 O N N 206 LP9 C14 C Y N 207 LP9 C15 C Y N 208 LP9 C16 C Y N 209 LP9 C17 C Y N 210 LP9 C18 C Y N 211 LP9 C19 C Y N 212 LP9 N20 N N N 213 LP9 C21 C N N 214 LP9 C22 C N N 215 LP9 C23 C N N 216 LP9 C24 C N N 217 LP9 O25 O N N 218 LP9 C26 C N N 219 LP9 C27 C N N 220 LP9 H H N N 221 LP9 H2 H N N 222 LP9 HO12 H N N 223 LP9 H15 H N N 224 LP9 H16 H N N 225 LP9 H18 H N N 226 LP9 H19 H N N 227 LP9 H21 H N N 228 LP9 H21A H N N 229 LP9 H22 H N N 230 LP9 H22A H N N 231 LP9 H22B H N N 232 LP9 H23 H N N 233 LP9 H24 H N N 234 LP9 H24A H N N 235 LP9 H26 H N N 236 LP9 H26A H N N 237 LP9 H27 H N N 238 LP9 H20 H N N 239 LP9 H211 H N N 240 LP9 H221 H N N 241 LP9 H231 H N N 242 LP9 H241 H N N 243 LYS N N N N 244 LYS CA C N S 245 LYS C C N N 246 LYS O O N N 247 LYS CB C N N 248 LYS CG C N N 249 LYS CD C N N 250 LYS CE C N N 251 LYS NZ N N N 252 LYS OXT O N N 253 LYS H H N N 254 LYS H2 H N N 255 LYS HA H N N 256 LYS HB2 H N N 257 LYS HB3 H N N 258 LYS HG2 H N N 259 LYS HG3 H N N 260 LYS HD2 H N N 261 LYS HD3 H N N 262 LYS HE2 H N N 263 LYS HE3 H N N 264 LYS HZ1 H N N 265 LYS HZ2 H N N 266 LYS HZ3 H N N 267 LYS HXT H N N 268 MN MN MN N N 269 PHE N N N N 270 PHE CA C N S 271 PHE C C N N 272 PHE O O N N 273 PHE CB C N N 274 PHE CG C Y N 275 PHE CD1 C Y N 276 PHE CD2 C Y N 277 PHE CE1 C Y N 278 PHE CE2 C Y N 279 PHE CZ C Y N 280 PHE OXT O N N 281 PHE H H N N 282 PHE H2 H N N 283 PHE HA H N N 284 PHE HB2 H N N 285 PHE HB3 H N N 286 PHE HD1 H N N 287 PHE HD2 H N N 288 PHE HE1 H N N 289 PHE HE2 H N N 290 PHE HZ H N N 291 PHE HXT H N N 292 PRO N N N N 293 PRO CA C N S 294 PRO C C N N 295 PRO O O N N 296 PRO CB C N N 297 PRO CG C N N 298 PRO CD C N N 299 PRO OXT O N N 300 PRO H H N N 301 PRO HA H N N 302 PRO HB2 H N N 303 PRO HB3 H N N 304 PRO HG2 H N N 305 PRO HG3 H N N 306 PRO HD2 H N N 307 PRO HD3 H N N 308 PRO HXT H N N 309 SER N N N N 310 SER CA C N S 311 SER C C N N 312 SER O O N N 313 SER CB C N N 314 SER OG O N N 315 SER OXT O N N 316 SER H H N N 317 SER H2 H N N 318 SER HA H N N 319 SER HB2 H N N 320 SER HB3 H N N 321 SER HG H N N 322 SER HXT H N N 323 THR N N N N 324 THR CA C N S 325 THR C C N N 326 THR O O N N 327 THR CB C N R 328 THR OG1 O N N 329 THR CG2 C N N 330 THR OXT O N N 331 THR H H N N 332 THR H2 H N N 333 THR HA H N N 334 THR HB H N N 335 THR HG1 H N N 336 THR HG21 H N N 337 THR HG22 H N N 338 THR HG23 H N N 339 THR HXT H N N 340 TRP N N N N 341 TRP CA C N S 342 TRP C C N N 343 TRP O O N N 344 TRP CB C N N 345 TRP CG C Y N 346 TRP CD1 C Y N 347 TRP CD2 C Y N 348 TRP NE1 N Y N 349 TRP CE2 C Y N 350 TRP CE3 C Y N 351 TRP CZ2 C Y N 352 TRP CZ3 C Y N 353 TRP CH2 C Y N 354 TRP OXT O N N 355 TRP H H N N 356 TRP H2 H N N 357 TRP HA H N N 358 TRP HB2 H N N 359 TRP HB3 H N N 360 TRP HD1 H N N 361 TRP HE1 H N N 362 TRP HE3 H N N 363 TRP HZ2 H N N 364 TRP HZ3 H N N 365 TRP HH2 H N N 366 TRP HXT H N N 367 TYR N N N N 368 TYR CA C N S 369 TYR C C N N 370 TYR O O N N 371 TYR CB C N N 372 TYR CG C Y N 373 TYR CD1 C Y N 374 TYR CD2 C Y N 375 TYR CE1 C Y N 376 TYR CE2 C Y N 377 TYR CZ C Y N 378 TYR OH O N N 379 TYR OXT O N N 380 TYR H H N N 381 TYR H2 H N N 382 TYR HA H N N 383 TYR HB2 H N N 384 TYR HB3 H N N 385 TYR HD1 H N N 386 TYR HD2 H N N 387 TYR HE1 H N N 388 TYR HE2 H N N 389 TYR HH H N N 390 TYR HXT H N N 391 VAL N N N N 392 VAL CA C N S 393 VAL C C N N 394 VAL O O N N 395 VAL CB C N N 396 VAL CG1 C N N 397 VAL CG2 C N N 398 VAL OXT O N N 399 VAL H H N N 400 VAL H2 H N N 401 VAL HA H N N 402 VAL HB H N N 403 VAL HG11 H N N 404 VAL HG12 H N N 405 VAL HG13 H N N 406 VAL HG21 H N N 407 VAL HG22 H N N 408 VAL HG23 H N N 409 VAL HXT H N N 410 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LP9 C C4 sing Y N 181 LP9 C H sing N N 182 LP9 N C3 sing Y N 183 LP9 O C8 sing N N 184 LP9 O H20 sing N N 185 LP9 C1 C doub Y N 186 LP9 C1 C2 sing Y N 187 LP9 C2 N doub Y N 188 LP9 C2 H2 sing N N 189 LP9 C3 N5 sing N N 190 LP9 C4 C3 doub Y N 191 LP9 C4 C8 sing N N 192 LP9 N5 C6 sing N N 193 LP9 N5 O12 sing N N 194 LP9 C6 O11 doub N N 195 LP9 C7 C6 sing N N 196 LP9 C7 C9 sing N N 197 LP9 C8 C7 doub N N 198 LP9 C9 O10 doub N N 199 LP9 O12 HO12 sing N N 200 LP9 O13 C1 sing N N 201 LP9 C14 O13 sing N N 202 LP9 C15 C14 sing Y N 203 LP9 C15 H15 sing N N 204 LP9 C16 C15 doub Y N 205 LP9 C16 H16 sing N N 206 LP9 C17 C16 sing Y N 207 LP9 C17 C18 doub Y N 208 LP9 C18 C19 sing Y N 209 LP9 C18 H18 sing N N 210 LP9 C19 C14 doub Y N 211 LP9 C19 H19 sing N N 212 LP9 N20 C17 sing N N 213 LP9 N20 C23 sing N N 214 LP9 C21 N20 sing N N 215 LP9 C21 H21 sing N N 216 LP9 C21 H21A sing N N 217 LP9 C22 C21 sing N N 218 LP9 C22 H22 sing N N 219 LP9 C22 H22A sing N N 220 LP9 C22 H22B sing N N 221 LP9 C23 H23 sing N N 222 LP9 C23 H211 sing N N 223 LP9 C24 C23 sing N N 224 LP9 C24 H24 sing N N 225 LP9 C24 H24A sing N N 226 LP9 C24 H221 sing N N 227 LP9 O25 C9 sing N N 228 LP9 C26 C27 sing N N 229 LP9 C26 H26 sing N N 230 LP9 C26 H26A sing N N 231 LP9 C26 H231 sing N N 232 LP9 C27 O25 sing N N 233 LP9 C27 H27 sing N N 234 LP9 C27 H241 sing N N 235 LYS N CA sing N N 236 LYS N H sing N N 237 LYS N H2 sing N N 238 LYS CA C sing N N 239 LYS CA CB sing N N 240 LYS CA HA sing N N 241 LYS C O doub N N 242 LYS C OXT sing N N 243 LYS CB CG sing N N 244 LYS CB HB2 sing N N 245 LYS CB HB3 sing N N 246 LYS CG CD sing N N 247 LYS CG HG2 sing N N 248 LYS CG HG3 sing N N 249 LYS CD CE sing N N 250 LYS CD HD2 sing N N 251 LYS CD HD3 sing N N 252 LYS CE NZ sing N N 253 LYS CE HE2 sing N N 254 LYS CE HE3 sing N N 255 LYS NZ HZ1 sing N N 256 LYS NZ HZ2 sing N N 257 LYS NZ HZ3 sing N N 258 LYS OXT HXT sing N N 259 PHE N CA sing N N 260 PHE N H sing N N 261 PHE N H2 sing N N 262 PHE CA C sing N N 263 PHE CA CB sing N N 264 PHE CA HA sing N N 265 PHE C O doub N N 266 PHE C OXT sing N N 267 PHE CB CG sing N N 268 PHE CB HB2 sing N N 269 PHE CB HB3 sing N N 270 PHE CG CD1 doub Y N 271 PHE CG CD2 sing Y N 272 PHE CD1 CE1 sing Y N 273 PHE CD1 HD1 sing N N 274 PHE CD2 CE2 doub Y N 275 PHE CD2 HD2 sing N N 276 PHE CE1 CZ doub Y N 277 PHE CE1 HE1 sing N N 278 PHE CE2 CZ sing Y N 279 PHE CE2 HE2 sing N N 280 PHE CZ HZ sing N N 281 PHE OXT HXT sing N N 282 PRO N CA sing N N 283 PRO N CD sing N N 284 PRO N H sing N N 285 PRO CA C sing N N 286 PRO CA CB sing N N 287 PRO CA HA sing N N 288 PRO C O doub N N 289 PRO C OXT sing N N 290 PRO CB CG sing N N 291 PRO CB HB2 sing N N 292 PRO CB HB3 sing N N 293 PRO CG CD sing N N 294 PRO CG HG2 sing N N 295 PRO CG HG3 sing N N 296 PRO CD HD2 sing N N 297 PRO CD HD3 sing N N 298 PRO OXT HXT sing N N 299 SER N CA sing N N 300 SER N H sing N N 301 SER N H2 sing N N 302 SER CA C sing N N 303 SER CA CB sing N N 304 SER CA HA sing N N 305 SER C O doub N N 306 SER C OXT sing N N 307 SER CB OG sing N N 308 SER CB HB2 sing N N 309 SER CB HB3 sing N N 310 SER OG HG sing N N 311 SER OXT HXT sing N N 312 THR N CA sing N N 313 THR N H sing N N 314 THR N H2 sing N N 315 THR CA C sing N N 316 THR CA CB sing N N 317 THR CA HA sing N N 318 THR C O doub N N 319 THR C OXT sing N N 320 THR CB OG1 sing N N 321 THR CB CG2 sing N N 322 THR CB HB sing N N 323 THR OG1 HG1 sing N N 324 THR CG2 HG21 sing N N 325 THR CG2 HG22 sing N N 326 THR CG2 HG23 sing N N 327 THR OXT HXT sing N N 328 TRP N CA sing N N 329 TRP N H sing N N 330 TRP N H2 sing N N 331 TRP CA C sing N N 332 TRP CA CB sing N N 333 TRP CA HA sing N N 334 TRP C O doub N N 335 TRP C OXT sing N N 336 TRP CB CG sing N N 337 TRP CB HB2 sing N N 338 TRP CB HB3 sing N N 339 TRP CG CD1 doub Y N 340 TRP CG CD2 sing Y N 341 TRP CD1 NE1 sing Y N 342 TRP CD1 HD1 sing N N 343 TRP CD2 CE2 doub Y N 344 TRP CD2 CE3 sing Y N 345 TRP NE1 CE2 sing Y N 346 TRP NE1 HE1 sing N N 347 TRP CE2 CZ2 sing Y N 348 TRP CE3 CZ3 doub Y N 349 TRP CE3 HE3 sing N N 350 TRP CZ2 CH2 doub Y N 351 TRP CZ2 HZ2 sing N N 352 TRP CZ3 CH2 sing Y N 353 TRP CZ3 HZ3 sing N N 354 TRP CH2 HH2 sing N N 355 TRP OXT HXT sing N N 356 TYR N CA sing N N 357 TYR N H sing N N 358 TYR N H2 sing N N 359 TYR CA C sing N N 360 TYR CA CB sing N N 361 TYR CA HA sing N N 362 TYR C O doub N N 363 TYR C OXT sing N N 364 TYR CB CG sing N N 365 TYR CB HB2 sing N N 366 TYR CB HB3 sing N N 367 TYR CG CD1 doub Y N 368 TYR CG CD2 sing Y N 369 TYR CD1 CE1 sing Y N 370 TYR CD1 HD1 sing N N 371 TYR CD2 CE2 doub Y N 372 TYR CD2 HD2 sing N N 373 TYR CE1 CZ doub Y N 374 TYR CE1 HE1 sing N N 375 TYR CE2 CZ sing Y N 376 TYR CE2 HE2 sing N N 377 TYR CZ OH sing N N 378 TYR OH HH sing N N 379 TYR OXT HXT sing N N 380 VAL N CA sing N N 381 VAL N H sing N N 382 VAL N H2 sing N N 383 VAL CA C sing N N 384 VAL CA CB sing N N 385 VAL CA HA sing N N 386 VAL C O doub N N 387 VAL C OXT sing N N 388 VAL CB CG1 sing N N 389 VAL CB CG2 sing N N 390 VAL CB HB sing N N 391 VAL CG1 HG11 sing N N 392 VAL CG1 HG12 sing N N 393 VAL CG1 HG13 sing N N 394 VAL CG2 HG21 sing N N 395 VAL CG2 HG22 sing N N 396 VAL CG2 HG23 sing N N 397 VAL OXT HXT sing N N 398 # _atom_sites.entry_id 3LP3 _atom_sites.fract_transf_matrix[1][1] 0.019510 _atom_sites.fract_transf_matrix[1][2] 0.011264 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022528 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008867 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O # loop_