HEADER PROTEIN BINDING 10-FEB-10 3LQV TITLE BRANCH RECOGNITION BY SF3B14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRE-MRNA BRANCH SITE PROTEIN P14; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 11-125; COMPND 5 SYNONYM: SF3B 14 KDA SUBUNIT; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SPLICING FACTOR 3B SUBUNIT 1; COMPND 9 CHAIN: P, Q; COMPND 10 FRAGMENT: UNP RESIDUES 377-415; COMPND 11 SYNONYM: PRE-MRNA-SPLICING FACTOR SF3B 155 KDA SUBUNIT, SF3B155, COMPND 12 SPLICEOSOME-ASSOCIATED PROTEIN 155, SAP 155; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CGI-110, HSPC175, HT006, SF3B14; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: SAP155, SF3B1, SF3B155; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS CYSLESS MUTANT, PRE-MRNA SPLICING, ADENINE, MRNA PROCESSING, MRNA KEYWDS 2 SPLICING, NUCLEUS, PHOSPHOPROTEIN, RNA-BINDING, SPLICEOSOME, PROTEIN KEYWDS 3 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.J.SCHELLENBERG,A.M.MACMILLAN REVDAT 3 21-FEB-24 3LQV 1 REMARK SEQADV REVDAT 2 01-NOV-17 3LQV 1 REMARK REVDAT 1 26-JAN-11 3LQV 0 JRNL AUTH M.J.SCHELLENBERG,E.L.DUL,A.M.MACMILLAN JRNL TITL BRANCH RECOGNITION BY SF3B14 JRNL REF RNA V. 17 155 2011 JRNL REFN ISSN 1355-8382 JRNL PMID 21062891 JRNL DOI 10.1261/RNA.2224411 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 18329 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 945 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.38 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1054 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2545 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 80 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.04000 REMARK 3 B22 (A**2) : 1.25000 REMARK 3 B33 (A**2) : 0.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.329 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.248 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.196 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.100 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2625 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3551 ; 1.551 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 300 ; 6.141 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 139 ;37.255 ;23.957 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 471 ;20.046 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;21.216 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 367 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2041 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1137 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1753 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 115 ; 0.173 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.184 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.086 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1573 ; 0.853 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2481 ; 1.371 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1222 ; 2.159 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1070 ; 3.334 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): 29.2120 31.5590 34.8870 REMARK 3 T TENSOR REMARK 3 T11: -0.2991 T22: 0.1417 REMARK 3 T33: -0.0840 T12: -0.0470 REMARK 3 T13: 0.0014 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 4.9803 L22: 1.9440 REMARK 3 L33: 2.9919 L12: -0.9628 REMARK 3 L13: 1.9748 L23: -0.1695 REMARK 3 S TENSOR REMARK 3 S11: -0.0189 S12: 0.2127 S13: 0.2703 REMARK 3 S21: -0.0770 S22: -0.0793 S23: -0.0401 REMARK 3 S31: -0.0339 S32: 0.1065 S33: 0.0982 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): 3.6440 22.2110 38.5050 REMARK 3 T TENSOR REMARK 3 T11: -0.2958 T22: 0.1873 REMARK 3 T33: -0.0284 T12: 0.0217 REMARK 3 T13: 0.0180 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 5.8830 L22: 2.3008 REMARK 3 L33: 1.5566 L12: 1.0655 REMARK 3 L13: -0.5262 L23: 0.3691 REMARK 3 S TENSOR REMARK 3 S11: -0.1288 S12: -0.1151 S13: -0.3903 REMARK 3 S21: -0.0039 S22: -0.0103 S23: -0.2218 REMARK 3 S31: 0.0825 S32: 0.2235 S33: 0.1392 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : P 6 P 43 REMARK 3 ORIGIN FOR THE GROUP (A): 19.9260 31.3760 22.5960 REMARK 3 T TENSOR REMARK 3 T11: -0.0943 T22: -0.0668 REMARK 3 T33: -0.1021 T12: -0.0537 REMARK 3 T13: 0.0461 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 4.2767 L22: 1.5665 REMARK 3 L33: 6.9136 L12: -1.9825 REMARK 3 L13: 4.9102 L23: -2.2102 REMARK 3 S TENSOR REMARK 3 S11: 0.1415 S12: -0.0117 S13: 0.1208 REMARK 3 S21: -0.0402 S22: -0.1709 S23: -0.1138 REMARK 3 S31: 0.0113 S32: 0.1482 S33: 0.0295 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Q 6 Q 43 REMARK 3 ORIGIN FOR THE GROUP (A): -5.0470 9.7340 40.3100 REMARK 3 T TENSOR REMARK 3 T11: -0.0249 T22: -0.1100 REMARK 3 T33: 0.1069 T12: 0.1545 REMARK 3 T13: 0.0707 T23: 0.0630 REMARK 3 L TENSOR REMARK 3 L11: 2.9848 L22: 6.3758 REMARK 3 L33: 5.2955 L12: 2.8870 REMARK 3 L13: 2.4335 L23: 1.3936 REMARK 3 S TENSOR REMARK 3 S11: 0.1251 S12: -0.2631 S13: -0.5420 REMARK 3 S21: 0.4881 S22: 0.0138 S23: 0.1565 REMARK 3 S31: 1.1765 S32: 0.4066 S33: -0.1390 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3LQV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000057616. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11586 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18348 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.30100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC 5.2.0005 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, 0.2M NACL, 20MM ADENINE, PH REMARK 280 6, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.08150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.08150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 50.92400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.35100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 50.92400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.35100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.08150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 50.92400 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 56.35100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 41.08150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 50.92400 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 56.35100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 11 REMARK 465 ARG A 12 REMARK 465 SER Q 377 REMARK 465 MET Q 378 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 57 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 100 22.46 -72.63 REMARK 500 GLN B 47 140.58 -179.22 REMARK 500 THR B 103 -55.17 -15.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADE A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADE B 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F9D RELATED DB: PDB DBREF 3LQV A 11 125 UNP Q9Y3B4 PM14_HUMAN 11 125 DBREF 3LQV B 11 125 UNP Q9Y3B4 PM14_HUMAN 11 125 DBREF 3LQV P 377 415 UNP O75533 SF3B1_HUMAN 377 415 DBREF 3LQV Q 377 415 UNP O75533 SF3B1_HUMAN 377 415 SEQADV 3LQV VAL A 74 UNP Q9Y3B4 CYS 74 CONFLICT SEQADV 3LQV SER A 83 UNP Q9Y3B4 CYS 83 CONFLICT SEQADV 3LQV VAL B 74 UNP Q9Y3B4 CYS 74 CONFLICT SEQADV 3LQV SER B 83 UNP Q9Y3B4 CYS 83 CONFLICT SEQRES 1 A 115 ILE ARG LEU PRO PRO GLU VAL ASN ARG ILE LEU TYR ILE SEQRES 2 A 115 ARG ASN LEU PRO TYR LYS ILE THR ALA GLU GLU MET TYR SEQRES 3 A 115 ASP ILE PHE GLY LYS TYR GLY PRO ILE ARG GLN ILE ARG SEQRES 4 A 115 VAL GLY ASN THR PRO GLU THR ARG GLY THR ALA TYR VAL SEQRES 5 A 115 VAL TYR GLU ASP ILE PHE ASP ALA LYS ASN ALA VAL ASP SEQRES 6 A 115 HIS LEU SER GLY PHE ASN VAL SER ASN ARG TYR LEU VAL SEQRES 7 A 115 VAL LEU TYR TYR ASN ALA ASN ARG ALA PHE GLN LYS MET SEQRES 8 A 115 ASP THR LYS LYS LYS GLU GLU GLN LEU LYS LEU LEU LYS SEQRES 9 A 115 GLU LYS TYR GLY ILE ASN THR ASP PRO PRO LYS SEQRES 1 B 115 ILE ARG LEU PRO PRO GLU VAL ASN ARG ILE LEU TYR ILE SEQRES 2 B 115 ARG ASN LEU PRO TYR LYS ILE THR ALA GLU GLU MET TYR SEQRES 3 B 115 ASP ILE PHE GLY LYS TYR GLY PRO ILE ARG GLN ILE ARG SEQRES 4 B 115 VAL GLY ASN THR PRO GLU THR ARG GLY THR ALA TYR VAL SEQRES 5 B 115 VAL TYR GLU ASP ILE PHE ASP ALA LYS ASN ALA VAL ASP SEQRES 6 B 115 HIS LEU SER GLY PHE ASN VAL SER ASN ARG TYR LEU VAL SEQRES 7 B 115 VAL LEU TYR TYR ASN ALA ASN ARG ALA PHE GLN LYS MET SEQRES 8 B 115 ASP THR LYS LYS LYS GLU GLU GLN LEU LYS LEU LEU LYS SEQRES 9 B 115 GLU LYS TYR GLY ILE ASN THR ASP PRO PRO LYS SEQRES 1 P 39 SER MET THR PRO GLU GLN LEU GLN ALA TRP ARG TRP GLU SEQRES 2 P 39 ARG GLU ILE ASP GLU ARG ASN ARG PRO LEU SER ASP GLU SEQRES 3 P 39 GLU LEU ASP ALA MET PHE PRO GLU GLY TYR LYS VAL LEU SEQRES 1 Q 39 SER MET THR PRO GLU GLN LEU GLN ALA TRP ARG TRP GLU SEQRES 2 Q 39 ARG GLU ILE ASP GLU ARG ASN ARG PRO LEU SER ASP GLU SEQRES 3 Q 39 GLU LEU ASP ALA MET PHE PRO GLU GLY TYR LYS VAL LEU HET ADE A 1 10 HET ADE B 2 10 HETNAM ADE ADENINE FORMUL 5 ADE 2(C5 H5 N5) FORMUL 7 HOH *80(H2 O) HELIX 1 1 THR A 31 LYS A 41 1 11 HELIX 2 2 ASP A 66 SER A 78 1 13 HELIX 3 3 ASN A 93 PHE A 98 1 6 HELIX 4 4 ASP A 102 GLY A 118 1 17 HELIX 5 5 THR B 31 GLY B 40 1 10 HELIX 6 6 LYS B 41 GLY B 43 5 3 HELIX 7 7 ASP B 66 SER B 78 1 13 HELIX 8 8 ASN B 93 PHE B 98 1 6 HELIX 9 9 ASP B 102 GLY B 118 1 17 HELIX 10 10 THR P 379 ARG P 395 1 17 HELIX 11 11 SER P 400 MET P 407 1 8 HELIX 12 12 THR Q 379 ARG Q 397 1 19 HELIX 13 13 SER Q 400 MET Q 407 1 8 SHEET 1 A 5 VAL A 88 TYR A 91 0 SHEET 2 A 5 ILE A 20 ARG A 24 -1 N TYR A 22 O LEU A 90 SHEET 3 A 5 ALA A 60 TYR A 64 -1 O VAL A 62 N LEU A 21 SHEET 4 A 5 ILE A 45 GLY A 51 -1 N ARG A 49 O TYR A 61 SHEET 5 A 5 TYR P 412 VAL P 414 -1 O LYS P 413 N VAL A 50 SHEET 1 B 5 VAL B 88 TYR B 91 0 SHEET 2 B 5 ILE B 20 ARG B 24 -1 N TYR B 22 O LEU B 90 SHEET 3 B 5 THR B 59 TYR B 64 -1 O VAL B 62 N LEU B 21 SHEET 4 B 5 ILE B 45 GLY B 51 -1 N GLN B 47 O VAL B 63 SHEET 5 B 5 TYR Q 412 VAL Q 414 -1 O LYS Q 413 N VAL B 50 SITE 1 AC1 8 TYR A 22 TYR A 61 TYR A 91 TYR A 92 SITE 2 AC1 8 ASN A 93 ARG A 96 ALA A 97 GLN A 99 SITE 1 AC2 8 TYR B 22 TYR B 61 TYR B 91 TYR B 92 SITE 2 AC2 8 ASN B 93 ARG B 96 ALA B 97 GLN B 99 CRYST1 101.848 112.702 82.163 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009819 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008873 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012171 0.00000