data_3LUH # _entry.id 3LUH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3LUH pdb_00003luh 10.2210/pdb3luh/pdb RCSB RCSB057745 ? ? WWPDB D_1000057745 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-07-17 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 3 'Structure model' '_software.version' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_struct_ref_seq_dif.details' 7 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LUH _pdbx_database_status.recvd_initial_deposition_date 2010-02-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3luc . unspecified PDB 3lud . unspecified PDB 3lug . unspecified PDB 3luj . unspecified PDB 3luk . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Frank, F.' 1 'Sonenberg, N.' 2 'Nagar, B.' 3 # _citation.id primary _citation.title ;Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2. ; _citation.journal_abbrev Nature _citation.journal_volume 465 _citation.page_first 818 _citation.page_last 822 _citation.year 2010 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20505670 _citation.pdbx_database_id_DOI 10.1038/nature09039 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Frank, F.' 1 ? primary 'Sonenberg, N.' 2 ? primary 'Nagar, B.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein argonaute-2' 15325.955 3 ? ? 'MID domain' ? 2 non-polymer syn "GUANOSINE-5'-MONOPHOSPHATE" 363.221 3 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 water nat water 18.015 311 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Argonaute2, hAgo2, Protein slicer, PAZ Piwi domain protein, PPD, Eukaryotic translation initiation factor 2C 2, eIF-2C 2, eIF2C 2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQL VVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVN ; _entity_poly.pdbx_seq_one_letter_code_can ;SNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQL VVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVN ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-MONOPHOSPHATE" 5GP 3 'PHOSPHATE ION' PO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 LYS n 1 4 GLN n 1 5 PHE n 1 6 HIS n 1 7 THR n 1 8 GLY n 1 9 ILE n 1 10 GLU n 1 11 ILE n 1 12 LYS n 1 13 VAL n 1 14 TRP n 1 15 ALA n 1 16 ILE n 1 17 ALA n 1 18 CYS n 1 19 PHE n 1 20 ALA n 1 21 PRO n 1 22 GLN n 1 23 ARG n 1 24 GLN n 1 25 CYS n 1 26 THR n 1 27 GLU n 1 28 VAL n 1 29 HIS n 1 30 LEU n 1 31 LYS n 1 32 SER n 1 33 PHE n 1 34 THR n 1 35 GLU n 1 36 GLN n 1 37 LEU n 1 38 ARG n 1 39 LYS n 1 40 ILE n 1 41 SER n 1 42 ARG n 1 43 ASP n 1 44 ALA n 1 45 GLY n 1 46 MET n 1 47 PRO n 1 48 ILE n 1 49 GLN n 1 50 GLY n 1 51 GLN n 1 52 PRO n 1 53 CYS n 1 54 PHE n 1 55 CYS n 1 56 LYS n 1 57 TYR n 1 58 ALA n 1 59 GLN n 1 60 GLY n 1 61 ALA n 1 62 ASP n 1 63 SER n 1 64 VAL n 1 65 GLU n 1 66 PRO n 1 67 MET n 1 68 PHE n 1 69 ARG n 1 70 HIS n 1 71 LEU n 1 72 LYS n 1 73 ASN n 1 74 THR n 1 75 TYR n 1 76 ALA n 1 77 GLY n 1 78 LEU n 1 79 GLN n 1 80 LEU n 1 81 VAL n 1 82 VAL n 1 83 VAL n 1 84 ILE n 1 85 LEU n 1 86 PRO n 1 87 GLY n 1 88 LYS n 1 89 THR n 1 90 PRO n 1 91 VAL n 1 92 TYR n 1 93 ALA n 1 94 GLU n 1 95 VAL n 1 96 LYS n 1 97 ARG n 1 98 VAL n 1 99 GLY n 1 100 ASP n 1 101 THR n 1 102 VAL n 1 103 LEU n 1 104 GLY n 1 105 MET n 1 106 ALA n 1 107 THR n 1 108 GLN n 1 109 CYS n 1 110 VAL n 1 111 GLN n 1 112 MET n 1 113 LYS n 1 114 ASN n 1 115 VAL n 1 116 GLN n 1 117 ARG n 1 118 THR n 1 119 THR n 1 120 PRO n 1 121 GLN n 1 122 THR n 1 123 LEU n 1 124 SER n 1 125 ASN n 1 126 LEU n 1 127 CYS n 1 128 LEU n 1 129 LYS n 1 130 ILE n 1 131 ASN n 1 132 VAL n 1 133 LYS n 1 134 LEU n 1 135 GLY n 1 136 GLY n 1 137 VAL n 1 138 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EIF2C2, AGO2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5GP non-polymer . "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 438 ? ? ? A . n A 1 2 ASN 2 439 ? ? ? A . n A 1 3 LYS 3 440 440 LYS LYS A . n A 1 4 GLN 4 441 441 GLN GLN A . n A 1 5 PHE 5 442 442 PHE PHE A . n A 1 6 HIS 6 443 443 HIS HIS A . n A 1 7 THR 7 444 444 THR THR A . n A 1 8 GLY 8 445 445 GLY GLY A . n A 1 9 ILE 9 446 446 ILE ILE A . n A 1 10 GLU 10 447 447 GLU GLU A . n A 1 11 ILE 11 448 448 ILE ILE A . n A 1 12 LYS 12 449 449 LYS LYS A . n A 1 13 VAL 13 450 450 VAL VAL A . n A 1 14 TRP 14 451 451 TRP TRP A . n A 1 15 ALA 15 452 452 ALA ALA A . n A 1 16 ILE 16 453 453 ILE ILE A . n A 1 17 ALA 17 454 454 ALA ALA A . n A 1 18 CYS 18 455 455 CYS CYS A . n A 1 19 PHE 19 456 456 PHE PHE A . n A 1 20 ALA 20 457 457 ALA ALA A . n A 1 21 PRO 21 458 458 PRO PRO A . n A 1 22 GLN 22 459 459 GLN GLN A . n A 1 23 ARG 23 460 460 ARG ARG A . n A 1 24 GLN 24 461 461 GLN GLN A . n A 1 25 CYS 25 462 462 CYS CYS A . n A 1 26 THR 26 463 463 THR THR A . n A 1 27 GLU 27 464 464 GLU GLU A . n A 1 28 VAL 28 465 465 VAL VAL A . n A 1 29 HIS 29 466 466 HIS HIS A . n A 1 30 LEU 30 467 467 LEU LEU A . n A 1 31 LYS 31 468 468 LYS LYS A . n A 1 32 SER 32 469 469 SER SER A . n A 1 33 PHE 33 470 470 PHE PHE A . n A 1 34 THR 34 471 471 THR THR A . n A 1 35 GLU 35 472 472 GLU GLU A . n A 1 36 GLN 36 473 473 GLN GLN A . n A 1 37 LEU 37 474 474 LEU LEU A . n A 1 38 ARG 38 475 475 ARG ARG A . n A 1 39 LYS 39 476 476 LYS LYS A . n A 1 40 ILE 40 477 477 ILE ILE A . n A 1 41 SER 41 478 478 SER SER A . n A 1 42 ARG 42 479 479 ARG ARG A . n A 1 43 ASP 43 480 480 ASP ASP A . n A 1 44 ALA 44 481 481 ALA ALA A . n A 1 45 GLY 45 482 482 GLY GLY A . n A 1 46 MET 46 483 483 MET MET A . n A 1 47 PRO 47 484 484 PRO PRO A . n A 1 48 ILE 48 485 485 ILE ILE A . n A 1 49 GLN 49 486 486 GLN GLN A . n A 1 50 GLY 50 487 487 GLY GLY A . n A 1 51 GLN 51 488 488 GLN GLN A . n A 1 52 PRO 52 489 489 PRO PRO A . n A 1 53 CYS 53 490 490 CYS CYS A . n A 1 54 PHE 54 491 491 PHE PHE A . n A 1 55 CYS 55 492 492 CYS CYS A . n A 1 56 LYS 56 493 493 LYS LYS A . n A 1 57 TYR 57 494 494 TYR TYR A . n A 1 58 ALA 58 495 495 ALA ALA A . n A 1 59 GLN 59 496 496 GLN GLN A . n A 1 60 GLY 60 497 497 GLY GLY A . n A 1 61 ALA 61 498 498 ALA ALA A . n A 1 62 ASP 62 499 499 ASP ASP A . n A 1 63 SER 63 500 500 SER SER A . n A 1 64 VAL 64 501 501 VAL VAL A . n A 1 65 GLU 65 502 502 GLU GLU A . n A 1 66 PRO 66 503 503 PRO PRO A . n A 1 67 MET 67 504 504 MET MET A . n A 1 68 PHE 68 505 505 PHE PHE A . n A 1 69 ARG 69 506 506 ARG ARG A . n A 1 70 HIS 70 507 507 HIS HIS A . n A 1 71 LEU 71 508 508 LEU LEU A . n A 1 72 LYS 72 509 509 LYS LYS A . n A 1 73 ASN 73 510 510 ASN ASN A . n A 1 74 THR 74 511 511 THR THR A . n A 1 75 TYR 75 512 512 TYR TYR A . n A 1 76 ALA 76 513 513 ALA ALA A . n A 1 77 GLY 77 514 514 GLY GLY A . n A 1 78 LEU 78 515 515 LEU LEU A . n A 1 79 GLN 79 516 516 GLN GLN A . n A 1 80 LEU 80 517 517 LEU LEU A . n A 1 81 VAL 81 518 518 VAL VAL A . n A 1 82 VAL 82 519 519 VAL VAL A . n A 1 83 VAL 83 520 520 VAL VAL A . n A 1 84 ILE 84 521 521 ILE ILE A . n A 1 85 LEU 85 522 522 LEU LEU A . n A 1 86 PRO 86 523 523 PRO PRO A . n A 1 87 GLY 87 524 524 GLY GLY A . n A 1 88 LYS 88 525 525 LYS LYS A . n A 1 89 THR 89 526 526 THR THR A . n A 1 90 PRO 90 527 527 PRO PRO A . n A 1 91 VAL 91 528 528 VAL VAL A . n A 1 92 TYR 92 529 529 TYR TYR A . n A 1 93 ALA 93 530 530 ALA ALA A . n A 1 94 GLU 94 531 531 GLU GLU A . n A 1 95 VAL 95 532 532 VAL VAL A . n A 1 96 LYS 96 533 533 LYS LYS A . n A 1 97 ARG 97 534 534 ARG ARG A . n A 1 98 VAL 98 535 535 VAL VAL A . n A 1 99 GLY 99 536 536 GLY GLY A . n A 1 100 ASP 100 537 537 ASP ASP A . n A 1 101 THR 101 538 538 THR THR A . n A 1 102 VAL 102 539 539 VAL VAL A . n A 1 103 LEU 103 540 540 LEU LEU A . n A 1 104 GLY 104 541 541 GLY GLY A . n A 1 105 MET 105 542 542 MET MET A . n A 1 106 ALA 106 543 543 ALA ALA A . n A 1 107 THR 107 544 544 THR THR A . n A 1 108 GLN 108 545 545 GLN GLN A . n A 1 109 CYS 109 546 546 CYS CYS A . n A 1 110 VAL 110 547 547 VAL VAL A . n A 1 111 GLN 111 548 548 GLN GLN A . n A 1 112 MET 112 549 549 MET MET A . n A 1 113 LYS 113 550 550 LYS LYS A . n A 1 114 ASN 114 551 551 ASN ASN A . n A 1 115 VAL 115 552 552 VAL VAL A . n A 1 116 GLN 116 553 553 GLN GLN A . n A 1 117 ARG 117 554 554 ARG ARG A . n A 1 118 THR 118 555 555 THR THR A . n A 1 119 THR 119 556 556 THR THR A . n A 1 120 PRO 120 557 557 PRO PRO A . n A 1 121 GLN 121 558 558 GLN GLN A . n A 1 122 THR 122 559 559 THR THR A . n A 1 123 LEU 123 560 560 LEU LEU A . n A 1 124 SER 124 561 561 SER SER A . n A 1 125 ASN 125 562 562 ASN ASN A . n A 1 126 LEU 126 563 563 LEU LEU A . n A 1 127 CYS 127 564 564 CYS CYS A . n A 1 128 LEU 128 565 565 LEU LEU A . n A 1 129 LYS 129 566 566 LYS LYS A . n A 1 130 ILE 130 567 567 ILE ILE A . n A 1 131 ASN 131 568 568 ASN ASN A . n A 1 132 VAL 132 569 569 VAL VAL A . n A 1 133 LYS 133 570 570 LYS LYS A . n A 1 134 LEU 134 571 571 LEU LEU A . n A 1 135 GLY 135 572 572 GLY GLY A . n A 1 136 GLY 136 573 ? ? ? A . n A 1 137 VAL 137 574 ? ? ? A . n A 1 138 ASN 138 575 ? ? ? A . n B 1 1 SER 1 438 ? ? ? B . n B 1 2 ASN 2 439 ? ? ? B . n B 1 3 LYS 3 440 440 LYS LYS B . n B 1 4 GLN 4 441 441 GLN GLN B . n B 1 5 PHE 5 442 442 PHE PHE B . n B 1 6 HIS 6 443 443 HIS HIS B . n B 1 7 THR 7 444 444 THR THR B . n B 1 8 GLY 8 445 445 GLY GLY B . n B 1 9 ILE 9 446 446 ILE ILE B . n B 1 10 GLU 10 447 447 GLU GLU B . n B 1 11 ILE 11 448 448 ILE ILE B . n B 1 12 LYS 12 449 449 LYS LYS B . n B 1 13 VAL 13 450 450 VAL VAL B . n B 1 14 TRP 14 451 451 TRP TRP B . n B 1 15 ALA 15 452 452 ALA ALA B . n B 1 16 ILE 16 453 453 ILE ILE B . n B 1 17 ALA 17 454 454 ALA ALA B . n B 1 18 CYS 18 455 455 CYS CYS B . n B 1 19 PHE 19 456 456 PHE PHE B . n B 1 20 ALA 20 457 457 ALA ALA B . n B 1 21 PRO 21 458 458 PRO PRO B . n B 1 22 GLN 22 459 459 GLN GLN B . n B 1 23 ARG 23 460 460 ARG ARG B . n B 1 24 GLN 24 461 461 GLN GLN B . n B 1 25 CYS 25 462 462 CYS CYS B . n B 1 26 THR 26 463 463 THR THR B . n B 1 27 GLU 27 464 464 GLU GLU B . n B 1 28 VAL 28 465 465 VAL VAL B . n B 1 29 HIS 29 466 466 HIS HIS B . n B 1 30 LEU 30 467 467 LEU LEU B . n B 1 31 LYS 31 468 468 LYS LYS B . n B 1 32 SER 32 469 469 SER SER B . n B 1 33 PHE 33 470 470 PHE PHE B . n B 1 34 THR 34 471 471 THR THR B . n B 1 35 GLU 35 472 472 GLU GLU B . n B 1 36 GLN 36 473 473 GLN GLN B . n B 1 37 LEU 37 474 474 LEU LEU B . n B 1 38 ARG 38 475 475 ARG ARG B . n B 1 39 LYS 39 476 476 LYS LYS B . n B 1 40 ILE 40 477 477 ILE ILE B . n B 1 41 SER 41 478 478 SER SER B . n B 1 42 ARG 42 479 479 ARG ARG B . n B 1 43 ASP 43 480 480 ASP ASP B . n B 1 44 ALA 44 481 481 ALA ALA B . n B 1 45 GLY 45 482 482 GLY GLY B . n B 1 46 MET 46 483 483 MET MET B . n B 1 47 PRO 47 484 484 PRO PRO B . n B 1 48 ILE 48 485 485 ILE ILE B . n B 1 49 GLN 49 486 486 GLN GLN B . n B 1 50 GLY 50 487 487 GLY GLY B . n B 1 51 GLN 51 488 488 GLN GLN B . n B 1 52 PRO 52 489 489 PRO PRO B . n B 1 53 CYS 53 490 490 CYS CYS B . n B 1 54 PHE 54 491 491 PHE PHE B . n B 1 55 CYS 55 492 492 CYS CYS B . n B 1 56 LYS 56 493 493 LYS LYS B . n B 1 57 TYR 57 494 494 TYR TYR B . n B 1 58 ALA 58 495 495 ALA ALA B . n B 1 59 GLN 59 496 496 GLN GLN B . n B 1 60 GLY 60 497 497 GLY GLY B . n B 1 61 ALA 61 498 498 ALA ALA B . n B 1 62 ASP 62 499 499 ASP ASP B . n B 1 63 SER 63 500 500 SER SER B . n B 1 64 VAL 64 501 501 VAL VAL B . n B 1 65 GLU 65 502 502 GLU GLU B . n B 1 66 PRO 66 503 503 PRO PRO B . n B 1 67 MET 67 504 504 MET MET B . n B 1 68 PHE 68 505 505 PHE PHE B . n B 1 69 ARG 69 506 506 ARG ARG B . n B 1 70 HIS 70 507 507 HIS HIS B . n B 1 71 LEU 71 508 508 LEU LEU B . n B 1 72 LYS 72 509 509 LYS LYS B . n B 1 73 ASN 73 510 510 ASN ASN B . n B 1 74 THR 74 511 511 THR THR B . n B 1 75 TYR 75 512 512 TYR TYR B . n B 1 76 ALA 76 513 513 ALA ALA B . n B 1 77 GLY 77 514 514 GLY GLY B . n B 1 78 LEU 78 515 515 LEU LEU B . n B 1 79 GLN 79 516 516 GLN GLN B . n B 1 80 LEU 80 517 517 LEU LEU B . n B 1 81 VAL 81 518 518 VAL VAL B . n B 1 82 VAL 82 519 519 VAL VAL B . n B 1 83 VAL 83 520 520 VAL VAL B . n B 1 84 ILE 84 521 521 ILE ILE B . n B 1 85 LEU 85 522 522 LEU LEU B . n B 1 86 PRO 86 523 523 PRO PRO B . n B 1 87 GLY 87 524 524 GLY GLY B . n B 1 88 LYS 88 525 525 LYS LYS B . n B 1 89 THR 89 526 526 THR THR B . n B 1 90 PRO 90 527 527 PRO PRO B . n B 1 91 VAL 91 528 528 VAL VAL B . n B 1 92 TYR 92 529 529 TYR TYR B . n B 1 93 ALA 93 530 530 ALA ALA B . n B 1 94 GLU 94 531 531 GLU GLU B . n B 1 95 VAL 95 532 532 VAL VAL B . n B 1 96 LYS 96 533 533 LYS LYS B . n B 1 97 ARG 97 534 534 ARG ARG B . n B 1 98 VAL 98 535 535 VAL VAL B . n B 1 99 GLY 99 536 536 GLY GLY B . n B 1 100 ASP 100 537 537 ASP ASP B . n B 1 101 THR 101 538 538 THR THR B . n B 1 102 VAL 102 539 539 VAL VAL B . n B 1 103 LEU 103 540 540 LEU LEU B . n B 1 104 GLY 104 541 541 GLY GLY B . n B 1 105 MET 105 542 542 MET MET B . n B 1 106 ALA 106 543 543 ALA ALA B . n B 1 107 THR 107 544 544 THR THR B . n B 1 108 GLN 108 545 545 GLN GLN B . n B 1 109 CYS 109 546 546 CYS CYS B . n B 1 110 VAL 110 547 547 VAL VAL B . n B 1 111 GLN 111 548 548 GLN GLN B . n B 1 112 MET 112 549 549 MET MET B . n B 1 113 LYS 113 550 550 LYS LYS B . n B 1 114 ASN 114 551 551 ASN ASN B . n B 1 115 VAL 115 552 552 VAL VAL B . n B 1 116 GLN 116 553 553 GLN GLN B . n B 1 117 ARG 117 554 554 ARG ARG B . n B 1 118 THR 118 555 555 THR THR B . n B 1 119 THR 119 556 556 THR THR B . n B 1 120 PRO 120 557 557 PRO PRO B . n B 1 121 GLN 121 558 558 GLN GLN B . n B 1 122 THR 122 559 559 THR THR B . n B 1 123 LEU 123 560 560 LEU LEU B . n B 1 124 SER 124 561 561 SER SER B . n B 1 125 ASN 125 562 562 ASN ASN B . n B 1 126 LEU 126 563 563 LEU LEU B . n B 1 127 CYS 127 564 564 CYS CYS B . n B 1 128 LEU 128 565 565 LEU LEU B . n B 1 129 LYS 129 566 566 LYS LYS B . n B 1 130 ILE 130 567 567 ILE ILE B . n B 1 131 ASN 131 568 568 ASN ASN B . n B 1 132 VAL 132 569 569 VAL VAL B . n B 1 133 LYS 133 570 570 LYS LYS B . n B 1 134 LEU 134 571 571 LEU LEU B . n B 1 135 GLY 135 572 572 GLY GLY B . n B 1 136 GLY 136 573 ? ? ? B . n B 1 137 VAL 137 574 ? ? ? B . n B 1 138 ASN 138 575 ? ? ? B . n C 1 1 SER 1 438 ? ? ? C . n C 1 2 ASN 2 439 ? ? ? C . n C 1 3 LYS 3 440 440 LYS LYS C . n C 1 4 GLN 4 441 441 GLN GLN C . n C 1 5 PHE 5 442 442 PHE PHE C . n C 1 6 HIS 6 443 443 HIS HIS C . n C 1 7 THR 7 444 444 THR THR C . n C 1 8 GLY 8 445 445 GLY GLY C . n C 1 9 ILE 9 446 446 ILE ILE C . n C 1 10 GLU 10 447 447 GLU GLU C . n C 1 11 ILE 11 448 448 ILE ILE C . n C 1 12 LYS 12 449 449 LYS LYS C . n C 1 13 VAL 13 450 450 VAL VAL C . n C 1 14 TRP 14 451 451 TRP TRP C . n C 1 15 ALA 15 452 452 ALA ALA C . n C 1 16 ILE 16 453 453 ILE ILE C . n C 1 17 ALA 17 454 454 ALA ALA C . n C 1 18 CYS 18 455 455 CYS CYS C . n C 1 19 PHE 19 456 456 PHE PHE C . n C 1 20 ALA 20 457 457 ALA ALA C . n C 1 21 PRO 21 458 458 PRO PRO C . n C 1 22 GLN 22 459 459 GLN GLN C . n C 1 23 ARG 23 460 460 ARG ARG C . n C 1 24 GLN 24 461 461 GLN GLN C . n C 1 25 CYS 25 462 462 CYS CYS C . n C 1 26 THR 26 463 463 THR THR C . n C 1 27 GLU 27 464 464 GLU GLU C . n C 1 28 VAL 28 465 465 VAL VAL C . n C 1 29 HIS 29 466 466 HIS HIS C . n C 1 30 LEU 30 467 467 LEU LEU C . n C 1 31 LYS 31 468 468 LYS LYS C . n C 1 32 SER 32 469 469 SER SER C . n C 1 33 PHE 33 470 470 PHE PHE C . n C 1 34 THR 34 471 471 THR THR C . n C 1 35 GLU 35 472 472 GLU GLU C . n C 1 36 GLN 36 473 473 GLN GLN C . n C 1 37 LEU 37 474 474 LEU LEU C . n C 1 38 ARG 38 475 475 ARG ARG C . n C 1 39 LYS 39 476 476 LYS LYS C . n C 1 40 ILE 40 477 477 ILE ILE C . n C 1 41 SER 41 478 478 SER SER C . n C 1 42 ARG 42 479 479 ARG ARG C . n C 1 43 ASP 43 480 480 ASP ASP C . n C 1 44 ALA 44 481 481 ALA ALA C . n C 1 45 GLY 45 482 482 GLY GLY C . n C 1 46 MET 46 483 483 MET MET C . n C 1 47 PRO 47 484 484 PRO PRO C . n C 1 48 ILE 48 485 485 ILE ILE C . n C 1 49 GLN 49 486 486 GLN GLN C . n C 1 50 GLY 50 487 487 GLY GLY C . n C 1 51 GLN 51 488 488 GLN GLN C . n C 1 52 PRO 52 489 489 PRO PRO C . n C 1 53 CYS 53 490 490 CYS CYS C . n C 1 54 PHE 54 491 491 PHE PHE C . n C 1 55 CYS 55 492 492 CYS CYS C . n C 1 56 LYS 56 493 493 LYS LYS C . n C 1 57 TYR 57 494 494 TYR TYR C . n C 1 58 ALA 58 495 495 ALA ALA C . n C 1 59 GLN 59 496 496 GLN GLN C . n C 1 60 GLY 60 497 497 GLY GLY C . n C 1 61 ALA 61 498 498 ALA ALA C . n C 1 62 ASP 62 499 499 ASP ASP C . n C 1 63 SER 63 500 500 SER SER C . n C 1 64 VAL 64 501 501 VAL VAL C . n C 1 65 GLU 65 502 502 GLU GLU C . n C 1 66 PRO 66 503 503 PRO PRO C . n C 1 67 MET 67 504 504 MET MET C . n C 1 68 PHE 68 505 505 PHE PHE C . n C 1 69 ARG 69 506 506 ARG ARG C . n C 1 70 HIS 70 507 507 HIS HIS C . n C 1 71 LEU 71 508 508 LEU LEU C . n C 1 72 LYS 72 509 509 LYS LYS C . n C 1 73 ASN 73 510 510 ASN ASN C . n C 1 74 THR 74 511 511 THR THR C . n C 1 75 TYR 75 512 512 TYR TYR C . n C 1 76 ALA 76 513 513 ALA ALA C . n C 1 77 GLY 77 514 514 GLY GLY C . n C 1 78 LEU 78 515 515 LEU LEU C . n C 1 79 GLN 79 516 516 GLN GLN C . n C 1 80 LEU 80 517 517 LEU LEU C . n C 1 81 VAL 81 518 518 VAL VAL C . n C 1 82 VAL 82 519 519 VAL VAL C . n C 1 83 VAL 83 520 520 VAL VAL C . n C 1 84 ILE 84 521 521 ILE ILE C . n C 1 85 LEU 85 522 522 LEU LEU C . n C 1 86 PRO 86 523 523 PRO PRO C . n C 1 87 GLY 87 524 524 GLY GLY C . n C 1 88 LYS 88 525 525 LYS LYS C . n C 1 89 THR 89 526 526 THR THR C . n C 1 90 PRO 90 527 527 PRO PRO C . n C 1 91 VAL 91 528 528 VAL VAL C . n C 1 92 TYR 92 529 529 TYR TYR C . n C 1 93 ALA 93 530 530 ALA ALA C . n C 1 94 GLU 94 531 531 GLU GLU C . n C 1 95 VAL 95 532 532 VAL VAL C . n C 1 96 LYS 96 533 533 LYS LYS C . n C 1 97 ARG 97 534 534 ARG ARG C . n C 1 98 VAL 98 535 535 VAL VAL C . n C 1 99 GLY 99 536 536 GLY GLY C . n C 1 100 ASP 100 537 537 ASP ASP C . n C 1 101 THR 101 538 538 THR THR C . n C 1 102 VAL 102 539 539 VAL VAL C . n C 1 103 LEU 103 540 540 LEU LEU C . n C 1 104 GLY 104 541 541 GLY GLY C . n C 1 105 MET 105 542 542 MET MET C . n C 1 106 ALA 106 543 543 ALA ALA C . n C 1 107 THR 107 544 544 THR THR C . n C 1 108 GLN 108 545 545 GLN GLN C . n C 1 109 CYS 109 546 546 CYS CYS C . n C 1 110 VAL 110 547 547 VAL VAL C . n C 1 111 GLN 111 548 548 GLN GLN C . n C 1 112 MET 112 549 549 MET MET C . n C 1 113 LYS 113 550 550 LYS LYS C . n C 1 114 ASN 114 551 551 ASN ASN C . n C 1 115 VAL 115 552 552 VAL VAL C . n C 1 116 GLN 116 553 553 GLN GLN C . n C 1 117 ARG 117 554 554 ARG ARG C . n C 1 118 THR 118 555 555 THR THR C . n C 1 119 THR 119 556 556 THR THR C . n C 1 120 PRO 120 557 557 PRO PRO C . n C 1 121 GLN 121 558 558 GLN GLN C . n C 1 122 THR 122 559 559 THR THR C . n C 1 123 LEU 123 560 560 LEU LEU C . n C 1 124 SER 124 561 561 SER SER C . n C 1 125 ASN 125 562 562 ASN ASN C . n C 1 126 LEU 126 563 563 LEU LEU C . n C 1 127 CYS 127 564 564 CYS CYS C . n C 1 128 LEU 128 565 565 LEU LEU C . n C 1 129 LYS 129 566 566 LYS LYS C . n C 1 130 ILE 130 567 567 ILE ILE C . n C 1 131 ASN 131 568 568 ASN ASN C . n C 1 132 VAL 132 569 569 VAL VAL C . n C 1 133 LYS 133 570 570 LYS LYS C . n C 1 134 LEU 134 571 571 LEU LEU C . n C 1 135 GLY 135 572 572 GLY GLY C . n C 1 136 GLY 136 573 ? ? ? C . n C 1 137 VAL 137 574 ? ? ? C . n C 1 138 ASN 138 575 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 5GP 1 3 3 5GP 5GP A . E 2 5GP 1 1 1 5GP 5GP B . F 2 5GP 1 4 4 5GP 5GP B . G 3 PO4 1 2 2 PO4 PO4 C . H 4 HOH 1 2 2 HOH HOH A . H 4 HOH 2 4 4 HOH HOH A . H 4 HOH 3 6 6 HOH HOH A . H 4 HOH 4 8 8 HOH HOH A . H 4 HOH 5 10 10 HOH HOH A . H 4 HOH 6 12 12 HOH HOH A . H 4 HOH 7 13 13 HOH HOH A . H 4 HOH 8 15 15 HOH HOH A . H 4 HOH 9 18 18 HOH HOH A . H 4 HOH 10 19 19 HOH HOH A . H 4 HOH 11 21 21 HOH HOH A . H 4 HOH 12 22 22 HOH HOH A . H 4 HOH 13 23 23 HOH HOH A . H 4 HOH 14 25 25 HOH HOH A . H 4 HOH 15 26 26 HOH HOH A . H 4 HOH 16 27 27 HOH HOH A . H 4 HOH 17 28 28 HOH HOH A . H 4 HOH 18 29 29 HOH HOH A . H 4 HOH 19 32 32 HOH HOH A . H 4 HOH 20 36 36 HOH HOH A . H 4 HOH 21 38 38 HOH HOH A . H 4 HOH 22 41 41 HOH HOH A . H 4 HOH 23 43 43 HOH HOH A . H 4 HOH 24 45 45 HOH HOH A . H 4 HOH 25 46 46 HOH HOH A . H 4 HOH 26 49 49 HOH HOH A . H 4 HOH 27 50 50 HOH HOH A . H 4 HOH 28 51 51 HOH HOH A . H 4 HOH 29 54 54 HOH HOH A . H 4 HOH 30 58 58 HOH HOH A . H 4 HOH 31 62 62 HOH HOH A . H 4 HOH 32 66 66 HOH HOH A . H 4 HOH 33 67 67 HOH HOH A . H 4 HOH 34 68 68 HOH HOH A . H 4 HOH 35 72 72 HOH HOH A . H 4 HOH 36 73 73 HOH HOH A . H 4 HOH 37 76 76 HOH HOH A . H 4 HOH 38 85 85 HOH HOH A . H 4 HOH 39 86 86 HOH HOH A . H 4 HOH 40 87 87 HOH HOH A . H 4 HOH 41 88 88 HOH HOH A . H 4 HOH 42 91 91 HOH HOH A . H 4 HOH 43 92 92 HOH HOH A . H 4 HOH 44 93 93 HOH HOH A . H 4 HOH 45 95 95 HOH HOH A . H 4 HOH 46 99 99 HOH HOH A . H 4 HOH 47 104 104 HOH HOH A . H 4 HOH 48 105 105 HOH HOH A . H 4 HOH 49 106 106 HOH HOH A . H 4 HOH 50 109 109 HOH HOH A . H 4 HOH 51 110 110 HOH HOH A . H 4 HOH 52 115 115 HOH HOH A . H 4 HOH 53 116 116 HOH HOH A . H 4 HOH 54 117 117 HOH HOH A . H 4 HOH 55 118 118 HOH HOH A . H 4 HOH 56 119 119 HOH HOH A . H 4 HOH 57 123 123 HOH HOH A . H 4 HOH 58 127 127 HOH HOH A . H 4 HOH 59 129 129 HOH HOH A . H 4 HOH 60 130 130 HOH HOH A . H 4 HOH 61 131 131 HOH HOH A . H 4 HOH 62 132 132 HOH HOH A . H 4 HOH 63 133 133 HOH HOH A . H 4 HOH 64 134 134 HOH HOH A . H 4 HOH 65 135 135 HOH HOH A . H 4 HOH 66 137 137 HOH HOH A . H 4 HOH 67 138 138 HOH HOH A . H 4 HOH 68 151 151 HOH HOH A . H 4 HOH 69 158 158 HOH HOH A . H 4 HOH 70 159 159 HOH HOH A . H 4 HOH 71 165 165 HOH HOH A . H 4 HOH 72 166 166 HOH HOH A . H 4 HOH 73 167 167 HOH HOH A . H 4 HOH 74 170 170 HOH HOH A . H 4 HOH 75 171 171 HOH HOH A . H 4 HOH 76 173 173 HOH HOH A . H 4 HOH 77 180 180 HOH HOH A . H 4 HOH 78 183 183 HOH HOH A . H 4 HOH 79 190 190 HOH HOH A . H 4 HOH 80 191 191 HOH HOH A . H 4 HOH 81 195 195 HOH HOH A . H 4 HOH 82 196 196 HOH HOH A . H 4 HOH 83 197 197 HOH HOH A . H 4 HOH 84 199 199 HOH HOH A . H 4 HOH 85 200 200 HOH HOH A . H 4 HOH 86 204 204 HOH HOH A . H 4 HOH 87 206 206 HOH HOH A . H 4 HOH 88 209 209 HOH HOH A . H 4 HOH 89 213 213 HOH HOH A . H 4 HOH 90 215 215 HOH HOH A . H 4 HOH 91 217 217 HOH HOH A . H 4 HOH 92 221 221 HOH HOH A . H 4 HOH 93 224 224 HOH HOH A . H 4 HOH 94 226 226 HOH HOH A . H 4 HOH 95 232 232 HOH HOH A . H 4 HOH 96 235 235 HOH HOH A . H 4 HOH 97 237 237 HOH HOH A . H 4 HOH 98 239 239 HOH HOH A . H 4 HOH 99 244 244 HOH HOH A . H 4 HOH 100 246 246 HOH HOH A . H 4 HOH 101 247 247 HOH HOH A . H 4 HOH 102 249 249 HOH HOH A . H 4 HOH 103 250 250 HOH HOH A . H 4 HOH 104 252 252 HOH HOH A . H 4 HOH 105 254 254 HOH HOH A . H 4 HOH 106 256 256 HOH HOH A . H 4 HOH 107 261 261 HOH HOH A . H 4 HOH 108 265 265 HOH HOH A . H 4 HOH 109 267 267 HOH HOH A . H 4 HOH 110 271 271 HOH HOH A . H 4 HOH 111 273 273 HOH HOH A . H 4 HOH 112 277 277 HOH HOH A . H 4 HOH 113 278 278 HOH HOH A . H 4 HOH 114 282 282 HOH HOH A . H 4 HOH 115 286 286 HOH HOH A . H 4 HOH 116 287 287 HOH HOH A . H 4 HOH 117 289 289 HOH HOH A . H 4 HOH 118 292 292 HOH HOH A . H 4 HOH 119 295 295 HOH HOH A . H 4 HOH 120 296 296 HOH HOH A . H 4 HOH 121 298 298 HOH HOH A . H 4 HOH 122 299 299 HOH HOH A . H 4 HOH 123 300 300 HOH HOH A . H 4 HOH 124 301 301 HOH HOH A . H 4 HOH 125 308 308 HOH HOH A . H 4 HOH 126 309 309 HOH HOH A . H 4 HOH 127 576 576 HOH HOH A . I 4 HOH 1 5 5 HOH HOH B . I 4 HOH 2 9 9 HOH HOH B . I 4 HOH 3 14 14 HOH HOH B . I 4 HOH 4 20 20 HOH HOH B . I 4 HOH 5 24 24 HOH HOH B . I 4 HOH 6 33 33 HOH HOH B . I 4 HOH 7 37 37 HOH HOH B . I 4 HOH 8 48 48 HOH HOH B . I 4 HOH 9 55 55 HOH HOH B . I 4 HOH 10 56 56 HOH HOH B . I 4 HOH 11 60 60 HOH HOH B . I 4 HOH 12 61 61 HOH HOH B . I 4 HOH 13 63 63 HOH HOH B . I 4 HOH 14 70 70 HOH HOH B . I 4 HOH 15 71 71 HOH HOH B . I 4 HOH 16 75 75 HOH HOH B . I 4 HOH 17 80 80 HOH HOH B . I 4 HOH 18 81 81 HOH HOH B . I 4 HOH 19 82 82 HOH HOH B . I 4 HOH 20 83 83 HOH HOH B . I 4 HOH 21 96 96 HOH HOH B . I 4 HOH 22 100 100 HOH HOH B . I 4 HOH 23 101 101 HOH HOH B . I 4 HOH 24 102 102 HOH HOH B . I 4 HOH 25 111 111 HOH HOH B . I 4 HOH 26 112 112 HOH HOH B . I 4 HOH 27 113 113 HOH HOH B . I 4 HOH 28 114 114 HOH HOH B . I 4 HOH 29 120 120 HOH HOH B . I 4 HOH 30 124 124 HOH HOH B . I 4 HOH 31 126 126 HOH HOH B . I 4 HOH 32 128 128 HOH HOH B . I 4 HOH 33 136 136 HOH HOH B . I 4 HOH 34 143 143 HOH HOH B . I 4 HOH 35 145 145 HOH HOH B . I 4 HOH 36 146 146 HOH HOH B . I 4 HOH 37 147 147 HOH HOH B . I 4 HOH 38 149 149 HOH HOH B . I 4 HOH 39 153 153 HOH HOH B . I 4 HOH 40 154 154 HOH HOH B . I 4 HOH 41 155 155 HOH HOH B . I 4 HOH 42 157 157 HOH HOH B . I 4 HOH 43 162 162 HOH HOH B . I 4 HOH 44 163 163 HOH HOH B . I 4 HOH 45 168 168 HOH HOH B . I 4 HOH 46 169 169 HOH HOH B . I 4 HOH 47 174 174 HOH HOH B . I 4 HOH 48 175 175 HOH HOH B . I 4 HOH 49 176 176 HOH HOH B . I 4 HOH 50 178 178 HOH HOH B . I 4 HOH 51 179 179 HOH HOH B . I 4 HOH 52 181 181 HOH HOH B . I 4 HOH 53 182 182 HOH HOH B . I 4 HOH 54 184 184 HOH HOH B . I 4 HOH 55 185 185 HOH HOH B . I 4 HOH 56 186 186 HOH HOH B . I 4 HOH 57 187 187 HOH HOH B . I 4 HOH 58 188 188 HOH HOH B . I 4 HOH 59 189 189 HOH HOH B . I 4 HOH 60 192 192 HOH HOH B . I 4 HOH 61 193 193 HOH HOH B . I 4 HOH 62 194 194 HOH HOH B . I 4 HOH 63 198 198 HOH HOH B . I 4 HOH 64 201 201 HOH HOH B . I 4 HOH 65 203 203 HOH HOH B . I 4 HOH 66 205 205 HOH HOH B . I 4 HOH 67 208 208 HOH HOH B . I 4 HOH 68 210 210 HOH HOH B . I 4 HOH 69 214 214 HOH HOH B . I 4 HOH 70 216 216 HOH HOH B . I 4 HOH 71 218 218 HOH HOH B . I 4 HOH 72 219 219 HOH HOH B . I 4 HOH 73 220 220 HOH HOH B . I 4 HOH 74 227 227 HOH HOH B . I 4 HOH 75 228 228 HOH HOH B . I 4 HOH 76 230 230 HOH HOH B . I 4 HOH 77 231 231 HOH HOH B . I 4 HOH 78 243 243 HOH HOH B . I 4 HOH 79 245 245 HOH HOH B . I 4 HOH 80 248 248 HOH HOH B . I 4 HOH 81 258 258 HOH HOH B . I 4 HOH 82 259 259 HOH HOH B . I 4 HOH 83 269 269 HOH HOH B . I 4 HOH 84 275 275 HOH HOH B . I 4 HOH 85 283 283 HOH HOH B . I 4 HOH 86 284 284 HOH HOH B . I 4 HOH 87 285 285 HOH HOH B . I 4 HOH 88 290 290 HOH HOH B . I 4 HOH 89 297 297 HOH HOH B . I 4 HOH 90 302 302 HOH HOH B . I 4 HOH 91 303 303 HOH HOH B . I 4 HOH 92 305 305 HOH HOH B . I 4 HOH 93 306 306 HOH HOH B . I 4 HOH 94 310 310 HOH HOH B . I 4 HOH 95 311 311 HOH HOH B . I 4 HOH 96 576 576 HOH HOH B . J 4 HOH 1 7 7 HOH HOH C . J 4 HOH 2 11 11 HOH HOH C . J 4 HOH 3 16 16 HOH HOH C . J 4 HOH 4 17 17 HOH HOH C . J 4 HOH 5 30 30 HOH HOH C . J 4 HOH 6 31 31 HOH HOH C . J 4 HOH 7 34 34 HOH HOH C . J 4 HOH 8 35 35 HOH HOH C . J 4 HOH 9 39 39 HOH HOH C . J 4 HOH 10 40 40 HOH HOH C . J 4 HOH 11 42 42 HOH HOH C . J 4 HOH 12 44 44 HOH HOH C . J 4 HOH 13 47 47 HOH HOH C . J 4 HOH 14 52 52 HOH HOH C . J 4 HOH 15 53 53 HOH HOH C . J 4 HOH 16 57 57 HOH HOH C . J 4 HOH 17 59 59 HOH HOH C . J 4 HOH 18 64 64 HOH HOH C . J 4 HOH 19 65 65 HOH HOH C . J 4 HOH 20 69 69 HOH HOH C . J 4 HOH 21 74 74 HOH HOH C . J 4 HOH 22 77 77 HOH HOH C . J 4 HOH 23 78 78 HOH HOH C . J 4 HOH 24 79 79 HOH HOH C . J 4 HOH 25 84 84 HOH HOH C . J 4 HOH 26 89 89 HOH HOH C . J 4 HOH 27 90 90 HOH HOH C . J 4 HOH 28 94 94 HOH HOH C . J 4 HOH 29 97 97 HOH HOH C . J 4 HOH 30 98 98 HOH HOH C . J 4 HOH 31 103 103 HOH HOH C . J 4 HOH 32 107 107 HOH HOH C . J 4 HOH 33 108 108 HOH HOH C . J 4 HOH 34 121 121 HOH HOH C . J 4 HOH 35 122 122 HOH HOH C . J 4 HOH 36 125 125 HOH HOH C . J 4 HOH 37 139 139 HOH HOH C . J 4 HOH 38 140 140 HOH HOH C . J 4 HOH 39 141 141 HOH HOH C . J 4 HOH 40 142 142 HOH HOH C . J 4 HOH 41 144 144 HOH HOH C . J 4 HOH 42 148 148 HOH HOH C . J 4 HOH 43 150 150 HOH HOH C . J 4 HOH 44 152 152 HOH HOH C . J 4 HOH 45 156 156 HOH HOH C . J 4 HOH 46 160 160 HOH HOH C . J 4 HOH 47 161 161 HOH HOH C . J 4 HOH 48 164 164 HOH HOH C . J 4 HOH 49 172 172 HOH HOH C . J 4 HOH 50 177 177 HOH HOH C . J 4 HOH 51 202 202 HOH HOH C . J 4 HOH 52 207 207 HOH HOH C . J 4 HOH 53 211 211 HOH HOH C . J 4 HOH 54 212 212 HOH HOH C . J 4 HOH 55 222 222 HOH HOH C . J 4 HOH 56 223 223 HOH HOH C . J 4 HOH 57 225 225 HOH HOH C . J 4 HOH 58 229 229 HOH HOH C . J 4 HOH 59 233 233 HOH HOH C . J 4 HOH 60 234 234 HOH HOH C . J 4 HOH 61 236 236 HOH HOH C . J 4 HOH 62 238 238 HOH HOH C . J 4 HOH 63 240 240 HOH HOH C . J 4 HOH 64 241 241 HOH HOH C . J 4 HOH 65 242 242 HOH HOH C . J 4 HOH 66 251 251 HOH HOH C . J 4 HOH 67 253 253 HOH HOH C . J 4 HOH 68 255 255 HOH HOH C . J 4 HOH 69 257 257 HOH HOH C . J 4 HOH 70 260 260 HOH HOH C . J 4 HOH 71 262 262 HOH HOH C . J 4 HOH 72 263 263 HOH HOH C . J 4 HOH 73 264 264 HOH HOH C . J 4 HOH 74 266 266 HOH HOH C . J 4 HOH 75 268 268 HOH HOH C . J 4 HOH 76 270 270 HOH HOH C . J 4 HOH 77 272 272 HOH HOH C . J 4 HOH 78 274 274 HOH HOH C . J 4 HOH 79 276 276 HOH HOH C . J 4 HOH 80 279 279 HOH HOH C . J 4 HOH 81 280 280 HOH HOH C . J 4 HOH 82 281 281 HOH HOH C . J 4 HOH 83 288 288 HOH HOH C . J 4 HOH 84 291 291 HOH HOH C . J 4 HOH 85 293 293 HOH HOH C . J 4 HOH 86 294 294 HOH HOH C . J 4 HOH 87 304 304 HOH HOH C . J 4 HOH 88 307 307 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 5GP 3 ? "C5'" ? D 5GP 1 "C5'" 2 1 N 1 A 5GP 3 ? "C4'" ? D 5GP 1 "C4'" 3 1 N 1 A 5GP 3 ? "O4'" ? D 5GP 1 "O4'" 4 1 N 1 A 5GP 3 ? "C3'" ? D 5GP 1 "C3'" 5 1 N 1 A 5GP 3 ? "O3'" ? D 5GP 1 "O3'" 6 1 N 1 A 5GP 3 ? "C2'" ? D 5GP 1 "C2'" 7 1 N 1 A 5GP 3 ? "O2'" ? D 5GP 1 "O2'" 8 1 N 1 A 5GP 3 ? "C1'" ? D 5GP 1 "C1'" 9 1 N 1 A 5GP 3 ? N9 ? D 5GP 1 N9 10 1 N 1 A 5GP 3 ? C8 ? D 5GP 1 C8 11 1 N 1 A 5GP 3 ? N7 ? D 5GP 1 N7 12 1 N 1 A 5GP 3 ? C5 ? D 5GP 1 C5 13 1 N 1 A 5GP 3 ? C6 ? D 5GP 1 C6 14 1 N 1 A 5GP 3 ? O6 ? D 5GP 1 O6 15 1 N 1 A 5GP 3 ? N1 ? D 5GP 1 N1 16 1 N 1 A 5GP 3 ? C2 ? D 5GP 1 C2 17 1 N 1 A 5GP 3 ? N2 ? D 5GP 1 N2 18 1 N 1 A 5GP 3 ? N3 ? D 5GP 1 N3 19 1 N 1 A 5GP 3 ? C4 ? D 5GP 1 C4 20 1 N 1 B 5GP 1 ? "C5'" ? E 5GP 1 "C5'" 21 1 N 1 B 5GP 1 ? "C4'" ? E 5GP 1 "C4'" 22 1 N 1 B 5GP 1 ? "O4'" ? E 5GP 1 "O4'" 23 1 N 1 B 5GP 1 ? "C3'" ? E 5GP 1 "C3'" 24 1 N 1 B 5GP 1 ? "O3'" ? E 5GP 1 "O3'" 25 1 N 1 B 5GP 1 ? "C2'" ? E 5GP 1 "C2'" 26 1 N 1 B 5GP 1 ? "O2'" ? E 5GP 1 "O2'" 27 1 N 1 B 5GP 1 ? "C1'" ? E 5GP 1 "C1'" 28 1 N 1 B 5GP 1 ? N9 ? E 5GP 1 N9 29 1 N 1 B 5GP 1 ? C8 ? E 5GP 1 C8 30 1 N 1 B 5GP 1 ? N7 ? E 5GP 1 N7 31 1 N 1 B 5GP 1 ? C5 ? E 5GP 1 C5 32 1 N 1 B 5GP 1 ? C6 ? E 5GP 1 C6 33 1 N 1 B 5GP 1 ? O6 ? E 5GP 1 O6 34 1 N 1 B 5GP 1 ? N1 ? E 5GP 1 N1 35 1 N 1 B 5GP 1 ? C2 ? E 5GP 1 C2 36 1 N 1 B 5GP 1 ? N2 ? E 5GP 1 N2 37 1 N 1 B 5GP 1 ? N3 ? E 5GP 1 N3 38 1 N 1 B 5GP 1 ? C4 ? E 5GP 1 C4 39 1 N 1 B 5GP 4 ? "C5'" ? F 5GP 1 "C5'" 40 1 N 1 B 5GP 4 ? "C4'" ? F 5GP 1 "C4'" 41 1 N 1 B 5GP 4 ? "O4'" ? F 5GP 1 "O4'" 42 1 N 1 B 5GP 4 ? "C3'" ? F 5GP 1 "C3'" 43 1 N 1 B 5GP 4 ? "O3'" ? F 5GP 1 "O3'" 44 1 N 1 B 5GP 4 ? "C2'" ? F 5GP 1 "C2'" 45 1 N 1 B 5GP 4 ? "O2'" ? F 5GP 1 "O2'" 46 1 N 1 B 5GP 4 ? "C1'" ? F 5GP 1 "C1'" 47 1 N 1 B 5GP 4 ? N9 ? F 5GP 1 N9 48 1 N 1 B 5GP 4 ? C8 ? F 5GP 1 C8 49 1 N 1 B 5GP 4 ? N7 ? F 5GP 1 N7 50 1 N 1 B 5GP 4 ? C5 ? F 5GP 1 C5 51 1 N 1 B 5GP 4 ? C6 ? F 5GP 1 C6 52 1 N 1 B 5GP 4 ? O6 ? F 5GP 1 O6 53 1 N 1 B 5GP 4 ? N1 ? F 5GP 1 N1 54 1 N 1 B 5GP 4 ? C2 ? F 5GP 1 C2 55 1 N 1 B 5GP 4 ? N2 ? F 5GP 1 N2 56 1 N 1 B 5GP 4 ? N3 ? F 5GP 1 N3 57 1 N 1 B 5GP 4 ? C4 ? F 5GP 1 C4 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(phenix.refine: 1.5_2)' ? 1 CNS refinement . ? 2 HKL-2000 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CNS phasing . ? 6 # _cell.entry_id 3LUH _cell.length_a 40.433 _cell.length_b 46.971 _cell.length_c 66.352 _cell.angle_alpha 86.06 _cell.angle_beta 72.77 _cell.angle_gamma 83.70 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LUH _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3LUH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.60 _exptl_crystal.density_percent_sol 52.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details ;0.1 M imidazole, 0.2 M NaCl, 0.46 M NaH2PO4, 1.84 M K2HPO4. Protein: 15 mg/mL, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.pdbx_collection_date 2009-11-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'MicroMax-007 HF' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3LUH _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.999 _reflns.number_obs 29127 _reflns.number_all 29127 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.999 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 76.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3LUH _refine.ls_number_reflns_obs 26409 _refine.ls_number_reflns_all 26409 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.02 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.497 _refine.ls_d_res_high 1.999 _refine.ls_percent_reflns_obs 84.21 _refine.ls_R_factor_obs 0.1875 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1846 _refine.ls_R_factor_R_free 0.2330 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.91 _refine.ls_number_reflns_R_free 1560 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.400 _refine.solvent_model_param_bsol 60.054 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.28 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3108 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 311 _refine_hist.number_atoms_total 3439 _refine_hist.d_res_high 1.999 _refine_hist.d_res_low 23.497 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 3182 'X-RAY DIFFRACTION' ? f_angle_d 1.028 ? ? 4301 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.216 ? ? 1192 'X-RAY DIFFRACTION' ? f_chiral_restr 0.069 ? ? 495 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 544 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.999 2.0700 1802 0.2392 62.00 0.2974 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.0700 2.1528 2274 0.2190 77.00 0.2719 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.1528 2.2507 2494 0.2003 84.00 0.2335 . . 167 . . . . 'X-RAY DIFFRACTION' . 2.2507 2.3692 2521 0.1977 85.00 0.2717 . . 145 . . . . 'X-RAY DIFFRACTION' . 2.3692 2.5175 2435 0.2010 83.00 0.2525 . . 169 . . . . 'X-RAY DIFFRACTION' . 2.5175 2.7116 2414 0.1968 82.00 0.2632 . . 158 . . . . 'X-RAY DIFFRACTION' . 2.7116 2.9840 2398 0.1982 82.00 0.2454 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.9840 3.4147 2743 0.1783 92.00 0.2229 . . 159 . . . . 'X-RAY DIFFRACTION' . 3.4147 4.2979 2861 0.1413 97.00 0.2122 . . 180 . . . . 'X-RAY DIFFRACTION' . 4.2979 23.4983 2907 0.1701 98.00 0.1901 . . 157 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3LUH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3LUH _struct.title 'Crystal structure of MID domain from hAGO2 in complex with GMP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LUH _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text 'MID domain, Ribonucleoprotein, RNA-binding, RNA-mediated gene silencing, Translation regulation, RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AGO2_HUMAN _struct_ref.pdbx_db_accession Q9UKV8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLV VVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVN ; _struct_ref.pdbx_align_begin 439 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LUH A 2 ? 138 ? Q9UKV8 439 ? 575 ? 439 575 2 1 3LUH B 2 ? 138 ? Q9UKV8 439 ? 575 ? 439 575 3 1 3LUH C 2 ? 138 ? Q9UKV8 439 ? 575 ? 439 575 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LUH SER A 1 ? UNP Q9UKV8 ? ? 'expression tag' 438 1 2 3LUH SER B 1 ? UNP Q9UKV8 ? ? 'expression tag' 438 2 3 3LUH SER C 1 ? UNP Q9UKV8 ? ? 'expression tag' 438 3 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 3 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,H 2 1 B,E,F,I 3 1 C,G,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 26 ? GLY A 45 ? THR A 463 GLY A 482 1 ? 20 HELX_P HELX_P2 2 GLY A 60 ? ASP A 62 ? GLY A 497 ASP A 499 5 ? 3 HELX_P HELX_P3 3 SER A 63 ? TYR A 75 ? SER A 500 TYR A 512 1 ? 13 HELX_P HELX_P4 4 PRO A 90 ? VAL A 102 ? PRO A 527 VAL A 539 1 ? 13 HELX_P HELX_P5 5 MET A 112 ? ARG A 117 ? MET A 549 ARG A 554 1 ? 6 HELX_P HELX_P6 6 THR A 119 ? LEU A 134 ? THR A 556 LEU A 571 1 ? 16 HELX_P HELX_P7 7 THR B 26 ? ALA B 44 ? THR B 463 ALA B 481 1 ? 19 HELX_P HELX_P8 8 GLY B 60 ? ASP B 62 ? GLY B 497 ASP B 499 5 ? 3 HELX_P HELX_P9 9 SER B 63 ? TYR B 75 ? SER B 500 TYR B 512 1 ? 13 HELX_P HELX_P10 10 THR B 89 ? VAL B 102 ? THR B 526 VAL B 539 1 ? 14 HELX_P HELX_P11 11 MET B 112 ? ARG B 117 ? MET B 549 ARG B 554 1 ? 6 HELX_P HELX_P12 12 THR B 119 ? GLY B 135 ? THR B 556 GLY B 572 1 ? 17 HELX_P HELX_P13 13 THR C 26 ? ALA C 44 ? THR C 463 ALA C 481 1 ? 19 HELX_P HELX_P14 14 GLY C 60 ? ASP C 62 ? GLY C 497 ASP C 499 5 ? 3 HELX_P HELX_P15 15 SER C 63 ? TYR C 75 ? SER C 500 TYR C 512 1 ? 13 HELX_P HELX_P16 16 PRO C 90 ? THR C 101 ? PRO C 527 THR C 538 1 ? 12 HELX_P HELX_P17 17 MET C 112 ? ARG C 117 ? MET C 549 ARG C 554 1 ? 6 HELX_P HELX_P18 18 THR C 119 ? GLY C 135 ? THR C 556 GLY C 572 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 54 ? TYR A 57 ? PHE A 491 TYR A 494 A 2 TRP A 14 ? CYS A 18 ? TRP A 451 CYS A 455 A 3 LEU A 80 ? LEU A 85 ? LEU A 517 LEU A 522 A 4 THR A 107 ? GLN A 111 ? THR A 544 GLN A 548 B 1 PHE B 54 ? TYR B 57 ? PHE B 491 TYR B 494 B 2 TRP B 14 ? CYS B 18 ? TRP B 451 CYS B 455 B 3 LEU B 80 ? LEU B 85 ? LEU B 517 LEU B 522 B 4 THR B 107 ? GLN B 111 ? THR B 544 GLN B 548 C 1 PHE C 54 ? TYR C 57 ? PHE C 491 TYR C 494 C 2 TRP C 14 ? CYS C 18 ? TRP C 451 CYS C 455 C 3 LEU C 80 ? LEU C 85 ? LEU C 517 LEU C 522 C 4 THR C 107 ? GLN C 111 ? THR C 544 GLN C 548 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 56 ? O LYS A 493 N CYS A 18 ? N CYS A 455 A 2 3 N ALA A 15 ? N ALA A 452 O VAL A 82 ? O VAL A 519 A 3 4 N VAL A 83 ? N VAL A 520 O GLN A 108 ? O GLN A 545 B 1 2 O PHE B 54 ? O PHE B 491 N ILE B 16 ? N ILE B 453 B 2 3 N ALA B 15 ? N ALA B 452 O VAL B 82 ? O VAL B 519 B 3 4 N VAL B 81 ? N VAL B 518 O GLN B 108 ? O GLN B 545 C 1 2 O PHE C 54 ? O PHE C 491 N ILE C 16 ? N ILE C 453 C 2 3 N ALA C 15 ? N ALA C 452 O VAL C 82 ? O VAL C 519 C 3 4 N LEU C 85 ? N LEU C 522 O VAL C 110 ? O VAL C 547 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 5GP 3 ? 6 'BINDING SITE FOR RESIDUE 5GP A 3' AC2 Software B 5GP 1 ? 2 'BINDING SITE FOR RESIDUE 5GP B 1' AC3 Software B 5GP 4 ? 5 'BINDING SITE FOR RESIDUE 5GP B 4' AC4 Software C PO4 2 ? 7 'BINDING SITE FOR RESIDUE PO4 C 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 TYR A 92 ? TYR A 529 . ? 1_555 ? 2 AC1 6 LYS A 96 ? LYS A 533 . ? 1_555 ? 3 AC1 6 GLN A 108 ? GLN A 545 . ? 1_555 ? 4 AC1 6 CYS A 109 ? CYS A 546 . ? 1_555 ? 5 AC1 6 LYS A 129 ? LYS A 566 . ? 1_555 ? 6 AC1 6 LYS A 133 ? LYS A 570 . ? 1_555 ? 7 AC2 2 ARG B 38 ? ARG B 475 . ? 1_555 ? 8 AC2 2 ARG B 42 ? ARG B 479 . ? 1_555 ? 9 AC3 5 TYR B 92 ? TYR B 529 . ? 1_555 ? 10 AC3 5 LYS B 96 ? LYS B 533 . ? 1_555 ? 11 AC3 5 GLN B 108 ? GLN B 545 . ? 1_555 ? 12 AC3 5 CYS B 109 ? CYS B 546 . ? 1_555 ? 13 AC3 5 LYS B 133 ? LYS B 570 . ? 1_555 ? 14 AC4 7 HOH J . ? HOH C 242 . ? 1_555 ? 15 AC4 7 TYR C 92 ? TYR C 529 . ? 1_555 ? 16 AC4 7 LYS C 96 ? LYS C 533 . ? 1_555 ? 17 AC4 7 GLN C 108 ? GLN C 545 . ? 1_555 ? 18 AC4 7 CYS C 109 ? CYS C 546 . ? 1_555 ? 19 AC4 7 LYS C 129 ? LYS C 566 . ? 1_555 ? 20 AC4 7 LYS C 133 ? LYS C 570 . ? 1_555 ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 438 ? A SER 1 2 1 Y 1 A ASN 439 ? A ASN 2 3 1 Y 1 A GLY 573 ? A GLY 136 4 1 Y 1 A VAL 574 ? A VAL 137 5 1 Y 1 A ASN 575 ? A ASN 138 6 1 Y 1 B SER 438 ? B SER 1 7 1 Y 1 B ASN 439 ? B ASN 2 8 1 Y 1 B GLY 573 ? B GLY 136 9 1 Y 1 B VAL 574 ? B VAL 137 10 1 Y 1 B ASN 575 ? B ASN 138 11 1 Y 1 C SER 438 ? C SER 1 12 1 Y 1 C ASN 439 ? C ASN 2 13 1 Y 1 C GLY 573 ? C GLY 136 14 1 Y 1 C VAL 574 ? C VAL 137 15 1 Y 1 C ASN 575 ? C ASN 138 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5GP P P N N 1 5GP O1P O N N 2 5GP O2P O N N 3 5GP O3P O N N 4 5GP "O5'" O N N 5 5GP "C5'" C N N 6 5GP "C4'" C N R 7 5GP "O4'" O N N 8 5GP "C3'" C N S 9 5GP "O3'" O N N 10 5GP "C2'" C N R 11 5GP "O2'" O N N 12 5GP "C1'" C N R 13 5GP N9 N Y N 14 5GP C8 C Y N 15 5GP N7 N Y N 16 5GP C5 C Y N 17 5GP C6 C N N 18 5GP O6 O N N 19 5GP N1 N N N 20 5GP C2 C N N 21 5GP N2 N N N 22 5GP N3 N N N 23 5GP C4 C Y N 24 5GP HOP2 H N N 25 5GP HOP3 H N N 26 5GP "H5'1" H N N 27 5GP "H5'2" H N N 28 5GP "H4'" H N N 29 5GP "H3'" H N N 30 5GP "HO3'" H N N 31 5GP "H2'" H N N 32 5GP "HO2'" H N N 33 5GP "H1'" H N N 34 5GP H8 H N N 35 5GP HN1 H N N 36 5GP HN21 H N N 37 5GP HN22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 GLN N N N N 126 GLN CA C N S 127 GLN C C N N 128 GLN O O N N 129 GLN CB C N N 130 GLN CG C N N 131 GLN CD C N N 132 GLN OE1 O N N 133 GLN NE2 N N N 134 GLN OXT O N N 135 GLN H H N N 136 GLN H2 H N N 137 GLN HA H N N 138 GLN HB2 H N N 139 GLN HB3 H N N 140 GLN HG2 H N N 141 GLN HG3 H N N 142 GLN HE21 H N N 143 GLN HE22 H N N 144 GLN HXT H N N 145 GLU N N N N 146 GLU CA C N S 147 GLU C C N N 148 GLU O O N N 149 GLU CB C N N 150 GLU CG C N N 151 GLU CD C N N 152 GLU OE1 O N N 153 GLU OE2 O N N 154 GLU OXT O N N 155 GLU H H N N 156 GLU H2 H N N 157 GLU HA H N N 158 GLU HB2 H N N 159 GLU HB3 H N N 160 GLU HG2 H N N 161 GLU HG3 H N N 162 GLU HE2 H N N 163 GLU HXT H N N 164 GLY N N N N 165 GLY CA C N N 166 GLY C C N N 167 GLY O O N N 168 GLY OXT O N N 169 GLY H H N N 170 GLY H2 H N N 171 GLY HA2 H N N 172 GLY HA3 H N N 173 GLY HXT H N N 174 HIS N N N N 175 HIS CA C N S 176 HIS C C N N 177 HIS O O N N 178 HIS CB C N N 179 HIS CG C Y N 180 HIS ND1 N Y N 181 HIS CD2 C Y N 182 HIS CE1 C Y N 183 HIS NE2 N Y N 184 HIS OXT O N N 185 HIS H H N N 186 HIS H2 H N N 187 HIS HA H N N 188 HIS HB2 H N N 189 HIS HB3 H N N 190 HIS HD1 H N N 191 HIS HD2 H N N 192 HIS HE1 H N N 193 HIS HE2 H N N 194 HIS HXT H N N 195 HOH O O N N 196 HOH H1 H N N 197 HOH H2 H N N 198 ILE N N N N 199 ILE CA C N S 200 ILE C C N N 201 ILE O O N N 202 ILE CB C N S 203 ILE CG1 C N N 204 ILE CG2 C N N 205 ILE CD1 C N N 206 ILE OXT O N N 207 ILE H H N N 208 ILE H2 H N N 209 ILE HA H N N 210 ILE HB H N N 211 ILE HG12 H N N 212 ILE HG13 H N N 213 ILE HG21 H N N 214 ILE HG22 H N N 215 ILE HG23 H N N 216 ILE HD11 H N N 217 ILE HD12 H N N 218 ILE HD13 H N N 219 ILE HXT H N N 220 LEU N N N N 221 LEU CA C N S 222 LEU C C N N 223 LEU O O N N 224 LEU CB C N N 225 LEU CG C N N 226 LEU CD1 C N N 227 LEU CD2 C N N 228 LEU OXT O N N 229 LEU H H N N 230 LEU H2 H N N 231 LEU HA H N N 232 LEU HB2 H N N 233 LEU HB3 H N N 234 LEU HG H N N 235 LEU HD11 H N N 236 LEU HD12 H N N 237 LEU HD13 H N N 238 LEU HD21 H N N 239 LEU HD22 H N N 240 LEU HD23 H N N 241 LEU HXT H N N 242 LYS N N N N 243 LYS CA C N S 244 LYS C C N N 245 LYS O O N N 246 LYS CB C N N 247 LYS CG C N N 248 LYS CD C N N 249 LYS CE C N N 250 LYS NZ N N N 251 LYS OXT O N N 252 LYS H H N N 253 LYS H2 H N N 254 LYS HA H N N 255 LYS HB2 H N N 256 LYS HB3 H N N 257 LYS HG2 H N N 258 LYS HG3 H N N 259 LYS HD2 H N N 260 LYS HD3 H N N 261 LYS HE2 H N N 262 LYS HE3 H N N 263 LYS HZ1 H N N 264 LYS HZ2 H N N 265 LYS HZ3 H N N 266 LYS HXT H N N 267 MET N N N N 268 MET CA C N S 269 MET C C N N 270 MET O O N N 271 MET CB C N N 272 MET CG C N N 273 MET SD S N N 274 MET CE C N N 275 MET OXT O N N 276 MET H H N N 277 MET H2 H N N 278 MET HA H N N 279 MET HB2 H N N 280 MET HB3 H N N 281 MET HG2 H N N 282 MET HG3 H N N 283 MET HE1 H N N 284 MET HE2 H N N 285 MET HE3 H N N 286 MET HXT H N N 287 PHE N N N N 288 PHE CA C N S 289 PHE C C N N 290 PHE O O N N 291 PHE CB C N N 292 PHE CG C Y N 293 PHE CD1 C Y N 294 PHE CD2 C Y N 295 PHE CE1 C Y N 296 PHE CE2 C Y N 297 PHE CZ C Y N 298 PHE OXT O N N 299 PHE H H N N 300 PHE H2 H N N 301 PHE HA H N N 302 PHE HB2 H N N 303 PHE HB3 H N N 304 PHE HD1 H N N 305 PHE HD2 H N N 306 PHE HE1 H N N 307 PHE HE2 H N N 308 PHE HZ H N N 309 PHE HXT H N N 310 PO4 P P N N 311 PO4 O1 O N N 312 PO4 O2 O N N 313 PO4 O3 O N N 314 PO4 O4 O N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5GP P O1P doub N N 1 5GP P O2P sing N N 2 5GP P O3P sing N N 3 5GP P "O5'" sing N N 4 5GP O2P HOP2 sing N N 5 5GP O3P HOP3 sing N N 6 5GP "O5'" "C5'" sing N N 7 5GP "C5'" "C4'" sing N N 8 5GP "C5'" "H5'1" sing N N 9 5GP "C5'" "H5'2" sing N N 10 5GP "C4'" "O4'" sing N N 11 5GP "C4'" "C3'" sing N N 12 5GP "C4'" "H4'" sing N N 13 5GP "O4'" "C1'" sing N N 14 5GP "C3'" "O3'" sing N N 15 5GP "C3'" "C2'" sing N N 16 5GP "C3'" "H3'" sing N N 17 5GP "O3'" "HO3'" sing N N 18 5GP "C2'" "O2'" sing N N 19 5GP "C2'" "C1'" sing N N 20 5GP "C2'" "H2'" sing N N 21 5GP "O2'" "HO2'" sing N N 22 5GP "C1'" N9 sing N N 23 5GP "C1'" "H1'" sing N N 24 5GP N9 C8 sing Y N 25 5GP N9 C4 sing Y N 26 5GP C8 N7 doub Y N 27 5GP C8 H8 sing N N 28 5GP N7 C5 sing Y N 29 5GP C5 C6 sing N N 30 5GP C5 C4 doub Y N 31 5GP C6 O6 doub N N 32 5GP C6 N1 sing N N 33 5GP N1 C2 sing N N 34 5GP N1 HN1 sing N N 35 5GP C2 N2 sing N N 36 5GP C2 N3 doub N N 37 5GP N2 HN21 sing N N 38 5GP N2 HN22 sing N N 39 5GP N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 GLN N CA sing N N 123 GLN N H sing N N 124 GLN N H2 sing N N 125 GLN CA C sing N N 126 GLN CA CB sing N N 127 GLN CA HA sing N N 128 GLN C O doub N N 129 GLN C OXT sing N N 130 GLN CB CG sing N N 131 GLN CB HB2 sing N N 132 GLN CB HB3 sing N N 133 GLN CG CD sing N N 134 GLN CG HG2 sing N N 135 GLN CG HG3 sing N N 136 GLN CD OE1 doub N N 137 GLN CD NE2 sing N N 138 GLN NE2 HE21 sing N N 139 GLN NE2 HE22 sing N N 140 GLN OXT HXT sing N N 141 GLU N CA sing N N 142 GLU N H sing N N 143 GLU N H2 sing N N 144 GLU CA C sing N N 145 GLU CA CB sing N N 146 GLU CA HA sing N N 147 GLU C O doub N N 148 GLU C OXT sing N N 149 GLU CB CG sing N N 150 GLU CB HB2 sing N N 151 GLU CB HB3 sing N N 152 GLU CG CD sing N N 153 GLU CG HG2 sing N N 154 GLU CG HG3 sing N N 155 GLU CD OE1 doub N N 156 GLU CD OE2 sing N N 157 GLU OE2 HE2 sing N N 158 GLU OXT HXT sing N N 159 GLY N CA sing N N 160 GLY N H sing N N 161 GLY N H2 sing N N 162 GLY CA C sing N N 163 GLY CA HA2 sing N N 164 GLY CA HA3 sing N N 165 GLY C O doub N N 166 GLY C OXT sing N N 167 GLY OXT HXT sing N N 168 HIS N CA sing N N 169 HIS N H sing N N 170 HIS N H2 sing N N 171 HIS CA C sing N N 172 HIS CA CB sing N N 173 HIS CA HA sing N N 174 HIS C O doub N N 175 HIS C OXT sing N N 176 HIS CB CG sing N N 177 HIS CB HB2 sing N N 178 HIS CB HB3 sing N N 179 HIS CG ND1 sing Y N 180 HIS CG CD2 doub Y N 181 HIS ND1 CE1 doub Y N 182 HIS ND1 HD1 sing N N 183 HIS CD2 NE2 sing Y N 184 HIS CD2 HD2 sing N N 185 HIS CE1 NE2 sing Y N 186 HIS CE1 HE1 sing N N 187 HIS NE2 HE2 sing N N 188 HIS OXT HXT sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 ILE N CA sing N N 192 ILE N H sing N N 193 ILE N H2 sing N N 194 ILE CA C sing N N 195 ILE CA CB sing N N 196 ILE CA HA sing N N 197 ILE C O doub N N 198 ILE C OXT sing N N 199 ILE CB CG1 sing N N 200 ILE CB CG2 sing N N 201 ILE CB HB sing N N 202 ILE CG1 CD1 sing N N 203 ILE CG1 HG12 sing N N 204 ILE CG1 HG13 sing N N 205 ILE CG2 HG21 sing N N 206 ILE CG2 HG22 sing N N 207 ILE CG2 HG23 sing N N 208 ILE CD1 HD11 sing N N 209 ILE CD1 HD12 sing N N 210 ILE CD1 HD13 sing N N 211 ILE OXT HXT sing N N 212 LEU N CA sing N N 213 LEU N H sing N N 214 LEU N H2 sing N N 215 LEU CA C sing N N 216 LEU CA CB sing N N 217 LEU CA HA sing N N 218 LEU C O doub N N 219 LEU C OXT sing N N 220 LEU CB CG sing N N 221 LEU CB HB2 sing N N 222 LEU CB HB3 sing N N 223 LEU CG CD1 sing N N 224 LEU CG CD2 sing N N 225 LEU CG HG sing N N 226 LEU CD1 HD11 sing N N 227 LEU CD1 HD12 sing N N 228 LEU CD1 HD13 sing N N 229 LEU CD2 HD21 sing N N 230 LEU CD2 HD22 sing N N 231 LEU CD2 HD23 sing N N 232 LEU OXT HXT sing N N 233 LYS N CA sing N N 234 LYS N H sing N N 235 LYS N H2 sing N N 236 LYS CA C sing N N 237 LYS CA CB sing N N 238 LYS CA HA sing N N 239 LYS C O doub N N 240 LYS C OXT sing N N 241 LYS CB CG sing N N 242 LYS CB HB2 sing N N 243 LYS CB HB3 sing N N 244 LYS CG CD sing N N 245 LYS CG HG2 sing N N 246 LYS CG HG3 sing N N 247 LYS CD CE sing N N 248 LYS CD HD2 sing N N 249 LYS CD HD3 sing N N 250 LYS CE NZ sing N N 251 LYS CE HE2 sing N N 252 LYS CE HE3 sing N N 253 LYS NZ HZ1 sing N N 254 LYS NZ HZ2 sing N N 255 LYS NZ HZ3 sing N N 256 LYS OXT HXT sing N N 257 MET N CA sing N N 258 MET N H sing N N 259 MET N H2 sing N N 260 MET CA C sing N N 261 MET CA CB sing N N 262 MET CA HA sing N N 263 MET C O doub N N 264 MET C OXT sing N N 265 MET CB CG sing N N 266 MET CB HB2 sing N N 267 MET CB HB3 sing N N 268 MET CG SD sing N N 269 MET CG HG2 sing N N 270 MET CG HG3 sing N N 271 MET SD CE sing N N 272 MET CE HE1 sing N N 273 MET CE HE2 sing N N 274 MET CE HE3 sing N N 275 MET OXT HXT sing N N 276 PHE N CA sing N N 277 PHE N H sing N N 278 PHE N H2 sing N N 279 PHE CA C sing N N 280 PHE CA CB sing N N 281 PHE CA HA sing N N 282 PHE C O doub N N 283 PHE C OXT sing N N 284 PHE CB CG sing N N 285 PHE CB HB2 sing N N 286 PHE CB HB3 sing N N 287 PHE CG CD1 doub Y N 288 PHE CG CD2 sing Y N 289 PHE CD1 CE1 sing Y N 290 PHE CD1 HD1 sing N N 291 PHE CD2 CE2 doub Y N 292 PHE CD2 HD2 sing N N 293 PHE CE1 CZ doub Y N 294 PHE CE1 HE1 sing N N 295 PHE CE2 CZ sing Y N 296 PHE CE2 HE2 sing N N 297 PHE CZ HZ sing N N 298 PHE OXT HXT sing N N 299 PO4 P O1 doub N N 300 PO4 P O2 sing N N 301 PO4 P O3 sing N N 302 PO4 P O4 sing N N 303 PRO N CA sing N N 304 PRO N CD sing N N 305 PRO N H sing N N 306 PRO CA C sing N N 307 PRO CA CB sing N N 308 PRO CA HA sing N N 309 PRO C O doub N N 310 PRO C OXT sing N N 311 PRO CB CG sing N N 312 PRO CB HB2 sing N N 313 PRO CB HB3 sing N N 314 PRO CG CD sing N N 315 PRO CG HG2 sing N N 316 PRO CG HG3 sing N N 317 PRO CD HD2 sing N N 318 PRO CD HD3 sing N N 319 PRO OXT HXT sing N N 320 SER N CA sing N N 321 SER N H sing N N 322 SER N H2 sing N N 323 SER CA C sing N N 324 SER CA CB sing N N 325 SER CA HA sing N N 326 SER C O doub N N 327 SER C OXT sing N N 328 SER CB OG sing N N 329 SER CB HB2 sing N N 330 SER CB HB3 sing N N 331 SER OG HG sing N N 332 SER OXT HXT sing N N 333 THR N CA sing N N 334 THR N H sing N N 335 THR N H2 sing N N 336 THR CA C sing N N 337 THR CA CB sing N N 338 THR CA HA sing N N 339 THR C O doub N N 340 THR C OXT sing N N 341 THR CB OG1 sing N N 342 THR CB CG2 sing N N 343 THR CB HB sing N N 344 THR OG1 HG1 sing N N 345 THR CG2 HG21 sing N N 346 THR CG2 HG22 sing N N 347 THR CG2 HG23 sing N N 348 THR OXT HXT sing N N 349 TRP N CA sing N N 350 TRP N H sing N N 351 TRP N H2 sing N N 352 TRP CA C sing N N 353 TRP CA CB sing N N 354 TRP CA HA sing N N 355 TRP C O doub N N 356 TRP C OXT sing N N 357 TRP CB CG sing N N 358 TRP CB HB2 sing N N 359 TRP CB HB3 sing N N 360 TRP CG CD1 doub Y N 361 TRP CG CD2 sing Y N 362 TRP CD1 NE1 sing Y N 363 TRP CD1 HD1 sing N N 364 TRP CD2 CE2 doub Y N 365 TRP CD2 CE3 sing Y N 366 TRP NE1 CE2 sing Y N 367 TRP NE1 HE1 sing N N 368 TRP CE2 CZ2 sing Y N 369 TRP CE3 CZ3 doub Y N 370 TRP CE3 HE3 sing N N 371 TRP CZ2 CH2 doub Y N 372 TRP CZ2 HZ2 sing N N 373 TRP CZ3 CH2 sing Y N 374 TRP CZ3 HZ3 sing N N 375 TRP CH2 HH2 sing N N 376 TRP OXT HXT sing N N 377 TYR N CA sing N N 378 TYR N H sing N N 379 TYR N H2 sing N N 380 TYR CA C sing N N 381 TYR CA CB sing N N 382 TYR CA HA sing N N 383 TYR C O doub N N 384 TYR C OXT sing N N 385 TYR CB CG sing N N 386 TYR CB HB2 sing N N 387 TYR CB HB3 sing N N 388 TYR CG CD1 doub Y N 389 TYR CG CD2 sing Y N 390 TYR CD1 CE1 sing Y N 391 TYR CD1 HD1 sing N N 392 TYR CD2 CE2 doub Y N 393 TYR CD2 HD2 sing N N 394 TYR CE1 CZ doub Y N 395 TYR CE1 HE1 sing N N 396 TYR CE2 CZ sing Y N 397 TYR CE2 HE2 sing N N 398 TYR CZ OH sing N N 399 TYR OH HH sing N N 400 TYR OXT HXT sing N N 401 VAL N CA sing N N 402 VAL N H sing N N 403 VAL N H2 sing N N 404 VAL CA C sing N N 405 VAL CA CB sing N N 406 VAL CA HA sing N N 407 VAL C O doub N N 408 VAL C OXT sing N N 409 VAL CB CG1 sing N N 410 VAL CB CG2 sing N N 411 VAL CB HB sing N N 412 VAL CG1 HG11 sing N N 413 VAL CG1 HG12 sing N N 414 VAL CG1 HG13 sing N N 415 VAL CG2 HG21 sing N N 416 VAL CG2 HG22 sing N N 417 VAL CG2 HG23 sing N N 418 VAL OXT HXT sing N N 419 # _atom_sites.entry_id 3LUH _atom_sites.fract_transf_matrix[1][1] 0.024732 _atom_sites.fract_transf_matrix[1][2] -0.002730 _atom_sites.fract_transf_matrix[1][3] -0.007571 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021419 _atom_sites.fract_transf_matrix[2][3] -0.000817 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015791 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_