data_3LXX # _entry.id 3LXX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3LXX RCSB RCSB057868 WWPDB D_1000057868 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3LXW _pdbx_database_related.details 'Crystal Structure of Human GTPase IMAP family member 1' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3LXX _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-02-25 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shen, Y.' 1 'Nedyalkova, L.' 2 'Tong, Y.' 3 'Tempel, W.' 4 'Mackenzie, F.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Bountra, C.' 8 'Weigelt, J.' 9 'Bochkarev, A.' 10 'Andrews, D.W.' 11 'Park, H.' 12 'Structural Genomics Consortium (SGC)' 13 # _citation.id primary _citation.title 'Crystal structure of human GTPase IMAP family member 4' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Shen, Y.' 1 primary 'Nedyalkova, L.' 2 primary 'Tong, Y.' 3 primary 'Tempel, W.' 4 primary 'Mackenzie, F.' 5 primary 'Arrowsmith, C.H.' 6 primary 'Edwards, A.M.' 7 primary 'Bountra, C.' 8 primary 'Weigelt, J.' 9 primary 'Bochkarev, A.' 10 primary 'Andrews, D.W.' 11 primary 'Park, H.' 12 # _cell.entry_id 3LXX _cell.length_a 41.266 _cell.length_b 102.663 _cell.length_c 100.555 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LXX _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTPase IMAP family member 4' 27327.096 1 ? ? ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 2 ? ? ? ? 5 water nat water 18.015 17 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Immunity-associated protein 4, Immunity-associated nucleotide 1 protein, IAN-1, hIAN1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)HHHHHHSSGRENLYFQGGPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWK ETELVVVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILK(MSE)FGERARSF(MSE) ILIFTRKDDLGDTNLHDYLREAPEDIQDL(MSE)DIFGDRYCALNNKATGAEQEAQRAQLLGLIQRVVRENKEGCYTNR (MSE)YQRAEEEIQKQTQA(MSE) ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGRENLYFQGGPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETEL VVVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGD TNLHDYLREAPEDIQDLMDIFGDRYCALNNKATGAEQEAQRAQLLGLIQRVVRENKEGCYTNRMYQRAEEEIQKQTQAM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 ARG n 1 12 GLU n 1 13 ASN n 1 14 LEU n 1 15 TYR n 1 16 PHE n 1 17 GLN n 1 18 GLY n 1 19 GLY n 1 20 PRO n 1 21 GLY n 1 22 ARG n 1 23 GLN n 1 24 GLU n 1 25 PRO n 1 26 ARG n 1 27 ASN n 1 28 SER n 1 29 GLN n 1 30 LEU n 1 31 ARG n 1 32 ILE n 1 33 VAL n 1 34 LEU n 1 35 VAL n 1 36 GLY n 1 37 LYS n 1 38 THR n 1 39 GLY n 1 40 ALA n 1 41 GLY n 1 42 LYS n 1 43 SER n 1 44 ALA n 1 45 THR n 1 46 GLY n 1 47 ASN n 1 48 SER n 1 49 ILE n 1 50 LEU n 1 51 GLY n 1 52 ARG n 1 53 LYS n 1 54 VAL n 1 55 PHE n 1 56 HIS n 1 57 SER n 1 58 GLY n 1 59 THR n 1 60 ALA n 1 61 ALA n 1 62 LYS n 1 63 SER n 1 64 ILE n 1 65 THR n 1 66 LYS n 1 67 LYS n 1 68 CYS n 1 69 GLU n 1 70 LYS n 1 71 ARG n 1 72 SER n 1 73 SER n 1 74 SER n 1 75 TRP n 1 76 LYS n 1 77 GLU n 1 78 THR n 1 79 GLU n 1 80 LEU n 1 81 VAL n 1 82 VAL n 1 83 VAL n 1 84 ASP n 1 85 THR n 1 86 PRO n 1 87 GLY n 1 88 ILE n 1 89 PHE n 1 90 ASP n 1 91 THR n 1 92 GLU n 1 93 VAL n 1 94 PRO n 1 95 ASN n 1 96 ALA n 1 97 GLU n 1 98 THR n 1 99 SER n 1 100 LYS n 1 101 GLU n 1 102 ILE n 1 103 ILE n 1 104 ARG n 1 105 CYS n 1 106 ILE n 1 107 LEU n 1 108 LEU n 1 109 THR n 1 110 SER n 1 111 PRO n 1 112 GLY n 1 113 PRO n 1 114 HIS n 1 115 ALA n 1 116 LEU n 1 117 LEU n 1 118 LEU n 1 119 VAL n 1 120 VAL n 1 121 PRO n 1 122 LEU n 1 123 GLY n 1 124 ARG n 1 125 TYR n 1 126 THR n 1 127 GLU n 1 128 GLU n 1 129 GLU n 1 130 HIS n 1 131 LYS n 1 132 ALA n 1 133 THR n 1 134 GLU n 1 135 LYS n 1 136 ILE n 1 137 LEU n 1 138 LYS n 1 139 MSE n 1 140 PHE n 1 141 GLY n 1 142 GLU n 1 143 ARG n 1 144 ALA n 1 145 ARG n 1 146 SER n 1 147 PHE n 1 148 MSE n 1 149 ILE n 1 150 LEU n 1 151 ILE n 1 152 PHE n 1 153 THR n 1 154 ARG n 1 155 LYS n 1 156 ASP n 1 157 ASP n 1 158 LEU n 1 159 GLY n 1 160 ASP n 1 161 THR n 1 162 ASN n 1 163 LEU n 1 164 HIS n 1 165 ASP n 1 166 TYR n 1 167 LEU n 1 168 ARG n 1 169 GLU n 1 170 ALA n 1 171 PRO n 1 172 GLU n 1 173 ASP n 1 174 ILE n 1 175 GLN n 1 176 ASP n 1 177 LEU n 1 178 MSE n 1 179 ASP n 1 180 ILE n 1 181 PHE n 1 182 GLY n 1 183 ASP n 1 184 ARG n 1 185 TYR n 1 186 CYS n 1 187 ALA n 1 188 LEU n 1 189 ASN n 1 190 ASN n 1 191 LYS n 1 192 ALA n 1 193 THR n 1 194 GLY n 1 195 ALA n 1 196 GLU n 1 197 GLN n 1 198 GLU n 1 199 ALA n 1 200 GLN n 1 201 ARG n 1 202 ALA n 1 203 GLN n 1 204 LEU n 1 205 LEU n 1 206 GLY n 1 207 LEU n 1 208 ILE n 1 209 GLN n 1 210 ARG n 1 211 VAL n 1 212 VAL n 1 213 ARG n 1 214 GLU n 1 215 ASN n 1 216 LYS n 1 217 GLU n 1 218 GLY n 1 219 CYS n 1 220 TYR n 1 221 THR n 1 222 ASN n 1 223 ARG n 1 224 MSE n 1 225 TYR n 1 226 GLN n 1 227 ARG n 1 228 ALA n 1 229 GLU n 1 230 GLU n 1 231 GLU n 1 232 ILE n 1 233 GLN n 1 234 LYS n 1 235 GLN n 1 236 THR n 1 237 GLN n 1 238 ALA n 1 239 MSE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GIMAP4, IAN1, IMAP4, MSTP062' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-V2R-pRARE2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GIMA4_HUMAN _struct_ref.pdbx_db_accession Q9NUV9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELVVVDTPGIFDTEVPNAET SKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLM DIFGDRYCALNNKATGAEQEAQRAQLLGLIQRVVRENKEGCYTNRMYQRAEEEIQKQTQAM ; _struct_ref.pdbx_align_begin 20 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3LXX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 19 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 239 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NUV9 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 240 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 240 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3LXX MSE A 1 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 2 1 1 3LXX HIS A 2 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 3 2 1 3LXX HIS A 3 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 4 3 1 3LXX HIS A 4 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 5 4 1 3LXX HIS A 5 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 6 5 1 3LXX HIS A 6 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 7 6 1 3LXX HIS A 7 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 8 7 1 3LXX SER A 8 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 9 8 1 3LXX SER A 9 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 10 9 1 3LXX GLY A 10 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 11 10 1 3LXX ARG A 11 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 12 11 1 3LXX GLU A 12 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 13 12 1 3LXX ASN A 13 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 14 13 1 3LXX LEU A 14 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 15 14 1 3LXX TYR A 15 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 16 15 1 3LXX PHE A 16 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 17 16 1 3LXX GLN A 17 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 18 17 1 3LXX GLY A 18 ? UNP Q9NUV9 ? ? 'EXPRESSION TAG' 19 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3LXX _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 36.88 _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '25% PEG-3350, 0.25M sodium/potassium tartrate, 0.1M Hepes. 1:100 dispase was added, pH 7.8, VAPOR DIFFUSION, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'MARMOSAIC 300 mm CCD' 2009-11-21 ? 2 CCD 'MARMOSAIC 300 mm CCD' 2009-11-19 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.monochromator _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type 1 'SINGLE WAVELENGTH' ? 1 M x-ray 2 'SINGLE WAVELENGTH' ? 1 M x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.98013 1.0 2 0.97948 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline 1 SYNCHROTRON 'APS BEAMLINE 23-ID-B' 0.98013 ? APS 23-ID-B 2 SYNCHROTRON 'APS BEAMLINE 23-ID-B' 0.97948 ? APS 23-ID-B # _reflns.entry_id 3LXX _reflns.d_resolution_high 2.150 _reflns.d_resolution_low 20.000 _reflns.number_obs 11706 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_netI_over_sigmaI 16.500 _reflns.pdbx_chi_squared 1.916 _reflns.pdbx_redundancy 6.200 _reflns.percent_possible_obs 96.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.15 2.19 ? ? ? 0.356 ? ? 1.506 2.80 ? 439 73.00 ? 1 2.19 2.23 ? ? ? 0.400 ? ? 1.440 3.40 ? 484 82.90 ? 2 2.23 2.27 ? ? ? 0.383 ? ? 1.494 4.20 ? 528 89.30 ? 3 2.27 2.32 ? ? ? 0.303 ? ? 1.485 4.60 ? 570 93.10 ? 4 2.32 2.37 ? ? ? 0.272 ? ? 1.373 5.20 ? 561 97.40 ? 5 2.37 2.42 ? ? ? 0.264 ? ? 1.357 5.50 ? 599 98.70 ? 6 2.42 2.48 ? ? ? 0.229 ? ? 1.358 6.00 ? 577 99.80 ? 7 2.48 2.55 ? ? ? 0.200 ? ? 1.412 6.40 ? 607 99.50 ? 8 2.55 2.62 ? ? ? 0.166 ? ? 1.398 6.60 ? 596 100.00 ? 9 2.62 2.71 ? ? ? 0.149 ? ? 1.370 7.00 ? 595 100.00 ? 10 2.71 2.80 ? ? ? 0.132 ? ? 1.364 7.10 ? 604 100.00 ? 11 2.80 2.92 ? ? ? 0.103 ? ? 1.610 7.20 ? 599 100.00 ? 12 2.92 3.05 ? ? ? 0.093 ? ? 1.763 7.20 ? 603 100.00 ? 13 3.05 3.21 ? ? ? 0.075 ? ? 1.909 7.30 ? 610 100.00 ? 14 3.21 3.41 ? ? ? 0.063 ? ? 2.017 7.20 ? 603 100.00 ? 15 3.41 3.67 ? ? ? 0.053 ? ? 2.208 7.10 ? 611 100.00 ? 16 3.67 4.04 ? ? ? 0.051 ? ? 2.733 7.10 ? 618 100.00 ? 17 4.04 4.61 ? ? ? 0.046 ? ? 2.940 7.10 ? 625 100.00 ? 18 4.61 5.79 ? ? ? 0.045 ? ? 2.793 6.90 ? 626 100.00 ? 19 5.79 20.00 ? ? ? 0.041 ? ? 3.160 6.30 ? 651 97.30 ? 20 # _refine.entry_id 3LXX _refine.ls_d_res_high 2.150 _refine.ls_d_res_low 19.088 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 96.864 _refine.ls_number_reflns_obs 11614 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS; U VALUES: WITH TLS ADDED' _refine.ls_R_factor_obs 0.254 _refine.ls_R_factor_R_work 0.252 _refine.ls_wR_factor_R_work 0.242 _refine.ls_R_factor_R_free 0.291 _refine.ls_wR_factor_R_free 0.278 _refine.ls_percent_reflns_R_free 4.856 _refine.ls_number_reflns_R_free 564 _refine.B_iso_mean 28.778 _refine.aniso_B[1][1] 1.230 _refine.aniso_B[2][2] -0.467 _refine.aniso_B[3][3] -0.763 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.914 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.pdbx_overall_ESU_R 0.258 _refine.pdbx_overall_ESU_R_Free 0.218 _refine.overall_SU_ML 0.150 _refine.overall_SU_B 12.830 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1229 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 1277 _refine_hist.d_res_high 2.150 _refine_hist.d_res_low 19.088 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1274 0.013 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 825 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1731 1.262 1.997 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2010 0.854 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 165 5.441 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 45 27.799 22.889 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 197 13.010 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10 19.339 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 210 0.071 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1403 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 258 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 833 0.574 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 345 0.115 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1312 1.110 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 441 1.817 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 419 2.778 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 20 2.205 2.150 864 78.356 635 0.336 42 0.481 . . . . . 'X-RAY DIFFRACTION' 20 2.265 2.205 832 87.260 681 0.305 45 0.420 . . . . . 'X-RAY DIFFRACTION' 20 2.329 2.265 815 94.233 734 0.298 34 0.415 . . . . . 'X-RAY DIFFRACTION' 20 2.400 2.329 806 98.635 753 0.268 42 0.371 . . . . . 'X-RAY DIFFRACTION' 20 2.477 2.400 763 99.476 710 0.270 49 0.356 . . . . . 'X-RAY DIFFRACTION' 20 2.563 2.477 747 99.598 715 0.255 29 0.252 . . . . . 'X-RAY DIFFRACTION' 20 2.658 2.563 723 100.000 680 0.253 43 0.316 . . . . . 'X-RAY DIFFRACTION' 20 2.764 2.658 719 100.000 687 0.267 32 0.374 . . . . . 'X-RAY DIFFRACTION' 20 2.884 2.764 659 100.000 630 0.254 29 0.310 . . . . . 'X-RAY DIFFRACTION' 20 3.021 2.884 640 100.000 610 0.251 30 0.291 . . . . . 'X-RAY DIFFRACTION' 20 3.180 3.021 620 100.000 594 0.252 26 0.339 . . . . . 'X-RAY DIFFRACTION' 20 3.368 3.180 578 100.000 555 0.256 23 0.239 . . . . . 'X-RAY DIFFRACTION' 20 3.592 3.368 555 100.000 537 0.225 18 0.253 . . . . . 'X-RAY DIFFRACTION' 20 3.869 3.592 520 100.000 491 0.223 29 0.192 . . . . . 'X-RAY DIFFRACTION' 20 4.220 3.869 494 100.000 472 0.210 22 0.249 . . . . . 'X-RAY DIFFRACTION' 20 4.690 4.220 433 100.000 409 0.193 24 0.283 . . . . . 'X-RAY DIFFRACTION' 20 5.362 4.690 396 100.000 378 0.246 18 0.216 . . . . . 'X-RAY DIFFRACTION' 20 6.441 5.362 343 100.000 330 0.286 13 0.424 . . . . . 'X-RAY DIFFRACTION' 20 8.631 6.441 282 99.291 271 0.315 9 0.351 . . . . . 'X-RAY DIFFRACTION' 20 19.088 8.631 201 92.040 178 0.300 7 0.263 . . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3LXX _struct.title 'Crystal structure of human GTPase IMAP family member 4' _struct.pdbx_descriptor 'GTPase IMAP family member 4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LXX _struct_keywords.text 'structural genomics consortium, SGC, Coiled coil, GTP-binding, Nucleotide-binding, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 41 ? GLY A 51 ? GLY A 42 GLY A 52 1 ? 11 HELX_P HELX_P2 2 ASN A 95 ? THR A 109 ? ASN A 96 THR A 110 1 ? 15 HELX_P HELX_P3 3 GLU A 127 ? ARG A 145 ? GLU A 128 ARG A 146 1 ? 19 HELX_P HELX_P4 4 ARG A 154 ? LEU A 158 ? ARG A 155 LEU A 159 5 ? 5 HELX_P HELX_P5 5 PRO A 171 ? GLY A 182 ? PRO A 172 GLY A 183 1 ? 12 HELX_P HELX_P6 6 THR A 193 ? ASN A 215 ? THR A 194 ASN A 216 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 68 SG ? ? ? 1_555 A CYS 105 SG ? ? A CYS 69 A CYS 106 1_555 ? ? ? ? ? ? ? 1.978 ? covale1 covale ? ? A LYS 138 C ? ? ? 1_555 A MSE 139 N ? ? A LYS 139 A MSE 140 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 139 C ? ? ? 1_555 A PHE 140 N ? ? A MSE 140 A PHE 141 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A PHE 147 C ? ? ? 1_555 A MSE 148 N ? ? A PHE 148 A MSE 149 1_555 ? ? ? ? ? ? ? 1.335 ? covale4 covale ? ? A MSE 148 C ? ? ? 1_555 A ILE 149 N ? ? A MSE 149 A ILE 150 1_555 ? ? ? ? ? ? ? 1.324 ? covale5 covale ? ? A LEU 177 C ? ? ? 1_555 A MSE 178 N ? ? A LEU 178 A MSE 179 1_555 ? ? ? ? ? ? ? 1.320 ? covale6 covale ? ? A MSE 178 C ? ? ? 1_555 A ASP 179 N ? ? A MSE 179 A ASP 180 1_555 ? ? ? ? ? ? ? 1.327 ? metalc1 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 245 1_555 ? ? ? ? ? ? ? 1.998 ? metalc2 metalc ? ? B GDP . O3B ? ? ? 1_555 C MG . MG ? ? A GDP 401 A MG 402 1_555 ? ? ? ? ? ? ? 2.084 ? metalc3 metalc ? ? A SER 43 OG ? ? ? 1_555 C MG . MG ? ? A SER 44 A MG 402 1_555 ? ? ? ? ? ? ? 2.116 ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 244 1_555 ? ? ? ? ? ? ? 2.139 ? metalc5 metalc ? ? A THR 65 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 66 A MG 402 1_555 ? ? ? ? ? ? ? 2.219 ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 243 1_555 ? ? ? ? ? ? ? 2.333 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 110 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 111 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 111 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 112 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.99 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 69 ? TRP A 75 ? GLU A 70 TRP A 76 A 2 THR A 78 ? ASP A 84 ? THR A 79 ASP A 85 A 3 GLN A 29 ? VAL A 35 ? GLN A 30 VAL A 36 A 4 ALA A 115 ? PRO A 121 ? ALA A 116 PRO A 122 A 5 MSE A 148 ? THR A 153 ? MSE A 149 THR A 154 A 6 TYR A 185 ? ALA A 187 ? TYR A 186 ALA A 188 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 75 ? N TRP A 76 O THR A 78 ? O THR A 79 A 2 3 O VAL A 81 ? O VAL A 82 N ILE A 32 ? N ILE A 33 A 3 4 N VAL A 35 ? N VAL A 36 O LEU A 117 ? O LEU A 118 A 4 5 N LEU A 118 ? N LEU A 119 O ILE A 151 ? O ILE A 152 A 5 6 N PHE A 152 ? N PHE A 153 O CYS A 186 ? O CYS A 187 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 18 'BINDING SITE FOR RESIDUE GDP A 401' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MG A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 THR A 38 ? THR A 39 . ? 1_555 ? 2 AC1 18 GLY A 39 ? GLY A 40 . ? 1_555 ? 3 AC1 18 ALA A 40 ? ALA A 41 . ? 1_555 ? 4 AC1 18 GLY A 41 ? GLY A 42 . ? 1_555 ? 5 AC1 18 LYS A 42 ? LYS A 43 . ? 1_555 ? 6 AC1 18 SER A 43 ? SER A 44 . ? 1_555 ? 7 AC1 18 ALA A 44 ? ALA A 45 . ? 1_555 ? 8 AC1 18 SER A 57 ? SER A 58 . ? 1_555 ? 9 AC1 18 ARG A 154 ? ARG A 155 . ? 1_555 ? 10 AC1 18 ASP A 156 ? ASP A 157 . ? 1_555 ? 11 AC1 18 LEU A 188 ? LEU A 189 . ? 1_555 ? 12 AC1 18 ASN A 189 ? ASN A 190 . ? 1_555 ? 13 AC1 18 ASN A 190 ? ASN A 191 . ? 1_555 ? 14 AC1 18 LYS A 191 ? LYS A 192 . ? 1_555 ? 15 AC1 18 HOH F . ? HOH A 243 . ? 1_555 ? 16 AC1 18 HOH F . ? HOH A 244 . ? 1_555 ? 17 AC1 18 HOH F . ? HOH A 245 . ? 1_555 ? 18 AC1 18 MG C . ? MG A 402 . ? 1_555 ? 19 AC2 6 SER A 43 ? SER A 44 . ? 1_555 ? 20 AC2 6 THR A 65 ? THR A 66 . ? 1_555 ? 21 AC2 6 HOH F . ? HOH A 243 . ? 1_555 ? 22 AC2 6 HOH F . ? HOH A 244 . ? 1_555 ? 23 AC2 6 HOH F . ? HOH A 245 . ? 1_555 ? 24 AC2 6 GDP B . ? GDP A 401 . ? 1_555 ? # _atom_sites.entry_id 3LXX _atom_sites.fract_transf_matrix[1][1] 0.024233 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009741 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009945 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S SE X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 2 ? ? ? A . n A 1 2 HIS 2 3 ? ? ? A . n A 1 3 HIS 3 4 ? ? ? A . n A 1 4 HIS 4 5 ? ? ? A . n A 1 5 HIS 5 6 ? ? ? A . n A 1 6 HIS 6 7 ? ? ? A . n A 1 7 HIS 7 8 ? ? ? A . n A 1 8 SER 8 9 ? ? ? A . n A 1 9 SER 9 10 ? ? ? A . n A 1 10 GLY 10 11 ? ? ? A . n A 1 11 ARG 11 12 ? ? ? A . n A 1 12 GLU 12 13 ? ? ? A . n A 1 13 ASN 13 14 ? ? ? A . n A 1 14 LEU 14 15 ? ? ? A . n A 1 15 TYR 15 16 ? ? ? A . n A 1 16 PHE 16 17 ? ? ? A . n A 1 17 GLN 17 18 ? ? ? A . n A 1 18 GLY 18 19 ? ? ? A . n A 1 19 GLY 19 20 ? ? ? A . n A 1 20 PRO 20 21 ? ? ? A . n A 1 21 GLY 21 22 ? ? ? A . n A 1 22 ARG 22 23 ? ? ? A . n A 1 23 GLN 23 24 ? ? ? A . n A 1 24 GLU 24 25 ? ? ? A . n A 1 25 PRO 25 26 ? ? ? A . n A 1 26 ARG 26 27 ? ? ? A . n A 1 27 ASN 27 28 ? ? ? A . n A 1 28 SER 28 29 29 SER SER A . n A 1 29 GLN 29 30 30 GLN GLN A . n A 1 30 LEU 30 31 31 LEU LEU A . n A 1 31 ARG 31 32 32 ARG ARG A . n A 1 32 ILE 32 33 33 ILE ILE A . n A 1 33 VAL 33 34 34 VAL VAL A . n A 1 34 LEU 34 35 35 LEU LEU A . n A 1 35 VAL 35 36 36 VAL VAL A . n A 1 36 GLY 36 37 37 GLY GLY A . n A 1 37 LYS 37 38 38 LYS LYS A . n A 1 38 THR 38 39 39 THR THR A . n A 1 39 GLY 39 40 40 GLY GLY A . n A 1 40 ALA 40 41 41 ALA ALA A . n A 1 41 GLY 41 42 42 GLY GLY A . n A 1 42 LYS 42 43 43 LYS LYS A . n A 1 43 SER 43 44 44 SER SER A . n A 1 44 ALA 44 45 45 ALA ALA A . n A 1 45 THR 45 46 46 THR THR A . n A 1 46 GLY 46 47 47 GLY GLY A . n A 1 47 ASN 47 48 48 ASN ASN A . n A 1 48 SER 48 49 49 SER SER A . n A 1 49 ILE 49 50 50 ILE ILE A . n A 1 50 LEU 50 51 51 LEU LEU A . n A 1 51 GLY 51 52 52 GLY GLY A . n A 1 52 ARG 52 53 53 ARG ARG A . n A 1 53 LYS 53 54 54 LYS LYS A . n A 1 54 VAL 54 55 55 VAL VAL A . n A 1 55 PHE 55 56 56 PHE PHE A . n A 1 56 HIS 56 57 57 HIS HIS A . n A 1 57 SER 57 58 58 SER SER A . n A 1 58 GLY 58 59 ? ? ? A . n A 1 59 THR 59 60 ? ? ? A . n A 1 60 ALA 60 61 ? ? ? A . n A 1 61 ALA 61 62 ? ? ? A . n A 1 62 LYS 62 63 ? ? ? A . n A 1 63 SER 63 64 ? ? ? A . n A 1 64 ILE 64 65 ? ? ? A . n A 1 65 THR 65 66 66 THR THR A . n A 1 66 LYS 66 67 67 LYS LYS A . n A 1 67 LYS 67 68 68 LYS LYS A . n A 1 68 CYS 68 69 69 CYS CYS A . n A 1 69 GLU 69 70 70 GLU GLU A . n A 1 70 LYS 70 71 71 LYS LYS A . n A 1 71 ARG 71 72 72 ARG ARG A . n A 1 72 SER 72 73 73 SER SER A . n A 1 73 SER 73 74 74 SER SER A . n A 1 74 SER 74 75 75 SER SER A . n A 1 75 TRP 75 76 76 TRP TRP A . n A 1 76 LYS 76 77 77 LYS LYS A . n A 1 77 GLU 77 78 78 GLU GLU A . n A 1 78 THR 78 79 79 THR THR A . n A 1 79 GLU 79 80 80 GLU GLU A . n A 1 80 LEU 80 81 81 LEU LEU A . n A 1 81 VAL 81 82 82 VAL VAL A . n A 1 82 VAL 82 83 83 VAL VAL A . n A 1 83 VAL 83 84 84 VAL VAL A . n A 1 84 ASP 84 85 85 ASP ASP A . n A 1 85 THR 85 86 86 THR THR A . n A 1 86 PRO 86 87 87 PRO PRO A . n A 1 87 GLY 87 88 88 GLY GLY A . n A 1 88 ILE 88 89 89 ILE ILE A . n A 1 89 PHE 89 90 90 PHE PHE A . n A 1 90 ASP 90 91 ? ? ? A . n A 1 91 THR 91 92 ? ? ? A . n A 1 92 GLU 92 93 ? ? ? A . n A 1 93 VAL 93 94 ? ? ? A . n A 1 94 PRO 94 95 ? ? ? A . n A 1 95 ASN 95 96 96 ASN ASN A . n A 1 96 ALA 96 97 97 ALA ALA A . n A 1 97 GLU 97 98 98 GLU GLU A . n A 1 98 THR 98 99 99 THR THR A . n A 1 99 SER 99 100 100 SER SER A . n A 1 100 LYS 100 101 101 LYS LYS A . n A 1 101 GLU 101 102 102 GLU GLU A . n A 1 102 ILE 102 103 103 ILE ILE A . n A 1 103 ILE 103 104 104 ILE ILE A . n A 1 104 ARG 104 105 105 ARG ARG A . n A 1 105 CYS 105 106 106 CYS CYS A . n A 1 106 ILE 106 107 107 ILE ILE A . n A 1 107 LEU 107 108 108 LEU LEU A . n A 1 108 LEU 108 109 109 LEU LEU A . n A 1 109 THR 109 110 110 THR THR A . n A 1 110 SER 110 111 111 SER SER A . n A 1 111 PRO 111 112 112 PRO PRO A . n A 1 112 GLY 112 113 113 GLY GLY A . n A 1 113 PRO 113 114 114 PRO PRO A . n A 1 114 HIS 114 115 115 HIS HIS A . n A 1 115 ALA 115 116 116 ALA ALA A . n A 1 116 LEU 116 117 117 LEU LEU A . n A 1 117 LEU 117 118 118 LEU LEU A . n A 1 118 LEU 118 119 119 LEU LEU A . n A 1 119 VAL 119 120 120 VAL VAL A . n A 1 120 VAL 120 121 121 VAL VAL A . n A 1 121 PRO 121 122 122 PRO PRO A . n A 1 122 LEU 122 123 123 LEU LEU A . n A 1 123 GLY 123 124 124 GLY GLY A . n A 1 124 ARG 124 125 125 ARG ARG A . n A 1 125 TYR 125 126 126 TYR TYR A . n A 1 126 THR 126 127 127 THR THR A . n A 1 127 GLU 127 128 128 GLU GLU A . n A 1 128 GLU 128 129 129 GLU GLU A . n A 1 129 GLU 129 130 130 GLU GLU A . n A 1 130 HIS 130 131 131 HIS HIS A . n A 1 131 LYS 131 132 132 LYS LYS A . n A 1 132 ALA 132 133 133 ALA ALA A . n A 1 133 THR 133 134 134 THR THR A . n A 1 134 GLU 134 135 135 GLU GLU A . n A 1 135 LYS 135 136 136 LYS LYS A . n A 1 136 ILE 136 137 137 ILE ILE A . n A 1 137 LEU 137 138 138 LEU LEU A . n A 1 138 LYS 138 139 139 LYS LYS A . n A 1 139 MSE 139 140 140 MSE MSE A . n A 1 140 PHE 140 141 141 PHE PHE A . n A 1 141 GLY 141 142 142 GLY GLY A . n A 1 142 GLU 142 143 143 GLU GLU A . n A 1 143 ARG 143 144 144 ARG ARG A . n A 1 144 ALA 144 145 145 ALA ALA A . n A 1 145 ARG 145 146 146 ARG ARG A . n A 1 146 SER 146 147 147 SER SER A . n A 1 147 PHE 147 148 148 PHE PHE A . n A 1 148 MSE 148 149 149 MSE MSE A . n A 1 149 ILE 149 150 150 ILE ILE A . n A 1 150 LEU 150 151 151 LEU LEU A . n A 1 151 ILE 151 152 152 ILE ILE A . n A 1 152 PHE 152 153 153 PHE PHE A . n A 1 153 THR 153 154 154 THR THR A . n A 1 154 ARG 154 155 155 ARG ARG A . n A 1 155 LYS 155 156 156 LYS LYS A . n A 1 156 ASP 156 157 157 ASP ASP A . n A 1 157 ASP 157 158 158 ASP ASP A . n A 1 158 LEU 158 159 159 LEU LEU A . n A 1 159 GLY 159 160 ? ? ? A . n A 1 160 ASP 160 161 ? ? ? A . n A 1 161 THR 161 162 ? ? ? A . n A 1 162 ASN 162 163 ? ? ? A . n A 1 163 LEU 163 164 ? ? ? A . n A 1 164 HIS 164 165 ? ? ? A . n A 1 165 ASP 165 166 ? ? ? A . n A 1 166 TYR 166 167 ? ? ? A . n A 1 167 LEU 167 168 ? ? ? A . n A 1 168 ARG 168 169 ? ? ? A . n A 1 169 GLU 169 170 ? ? ? A . n A 1 170 ALA 170 171 ? ? ? A . n A 1 171 PRO 171 172 172 PRO PRO A . n A 1 172 GLU 172 173 173 GLU GLU A . n A 1 173 ASP 173 174 174 ASP ASP A . n A 1 174 ILE 174 175 175 ILE ILE A . n A 1 175 GLN 175 176 176 GLN GLN A . n A 1 176 ASP 176 177 177 ASP ASP A . n A 1 177 LEU 177 178 178 LEU LEU A . n A 1 178 MSE 178 179 179 MSE MSE A . n A 1 179 ASP 179 180 180 ASP ASP A . n A 1 180 ILE 180 181 181 ILE ILE A . n A 1 181 PHE 181 182 182 PHE PHE A . n A 1 182 GLY 182 183 183 GLY GLY A . n A 1 183 ASP 183 184 184 ASP ASP A . n A 1 184 ARG 184 185 185 ARG ARG A . n A 1 185 TYR 185 186 186 TYR TYR A . n A 1 186 CYS 186 187 187 CYS CYS A . n A 1 187 ALA 187 188 188 ALA ALA A . n A 1 188 LEU 188 189 189 LEU LEU A . n A 1 189 ASN 189 190 190 ASN ASN A . n A 1 190 ASN 190 191 191 ASN ASN A . n A 1 191 LYS 191 192 192 LYS LYS A . n A 1 192 ALA 192 193 193 ALA ALA A . n A 1 193 THR 193 194 194 THR THR A . n A 1 194 GLY 194 195 195 GLY GLY A . n A 1 195 ALA 195 196 196 ALA ALA A . n A 1 196 GLU 196 197 197 GLU GLU A . n A 1 197 GLN 197 198 198 GLN GLN A . n A 1 198 GLU 198 199 199 GLU GLU A . n A 1 199 ALA 199 200 200 ALA ALA A . n A 1 200 GLN 200 201 201 GLN GLN A . n A 1 201 ARG 201 202 202 ARG ARG A . n A 1 202 ALA 202 203 203 ALA ALA A . n A 1 203 GLN 203 204 204 GLN GLN A . n A 1 204 LEU 204 205 205 LEU LEU A . n A 1 205 LEU 205 206 206 LEU LEU A . n A 1 206 GLY 206 207 207 GLY GLY A . n A 1 207 LEU 207 208 208 LEU LEU A . n A 1 208 ILE 208 209 209 ILE ILE A . n A 1 209 GLN 209 210 210 GLN GLN A . n A 1 210 ARG 210 211 211 ARG ARG A . n A 1 211 VAL 211 212 212 VAL VAL A . n A 1 212 VAL 212 213 213 VAL VAL A . n A 1 213 ARG 213 214 214 ARG ARG A . n A 1 214 GLU 214 215 215 GLU GLU A . n A 1 215 ASN 215 216 216 ASN ASN A . n A 1 216 LYS 216 217 217 LYS LYS A . n A 1 217 GLU 217 218 218 GLU GLU A . n A 1 218 GLY 218 219 219 GLY GLY A . n A 1 219 CYS 219 220 220 CYS CYS A . n A 1 220 TYR 220 221 221 TYR TYR A . n A 1 221 THR 221 222 ? ? ? A . n A 1 222 ASN 222 223 ? ? ? A . n A 1 223 ARG 223 224 ? ? ? A . n A 1 224 MSE 224 225 ? ? ? A . n A 1 225 TYR 225 226 ? ? ? A . n A 1 226 GLN 226 227 ? ? ? A . n A 1 227 ARG 227 228 ? ? ? A . n A 1 228 ALA 228 229 ? ? ? A . n A 1 229 GLU 229 230 ? ? ? A . n A 1 230 GLU 230 231 ? ? ? A . n A 1 231 GLU 231 232 ? ? ? A . n A 1 232 ILE 232 233 ? ? ? A . n A 1 233 GLN 233 234 ? ? ? A . n A 1 234 LYS 234 235 ? ? ? A . n A 1 235 GLN 235 236 ? ? ? A . n A 1 236 THR 236 237 ? ? ? A . n A 1 237 GLN 237 238 ? ? ? A . n A 1 238 ALA 238 239 ? ? ? A . n A 1 239 MSE 239 240 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 401 401 GDP GDP A . C 3 MG 1 402 402 MG MG A . D 4 UNX 1 1 1 UNX UNX A . E 4 UNX 1 241 2 UNX UNX A . F 5 HOH 1 242 1 HOH HOH A . F 5 HOH 2 243 2 HOH HOH A . F 5 HOH 3 244 3 HOH HOH A . F 5 HOH 4 245 5 HOH HOH A . F 5 HOH 5 246 6 HOH HOH A . F 5 HOH 6 247 7 HOH HOH A . F 5 HOH 7 248 8 HOH HOH A . F 5 HOH 8 249 9 HOH HOH A . F 5 HOH 9 250 10 HOH HOH A . F 5 HOH 10 251 11 HOH HOH A . F 5 HOH 11 252 13 HOH HOH A . F 5 HOH 12 253 14 HOH HOH A . F 5 HOH 13 254 15 HOH HOH A . F 5 HOH 14 255 16 HOH HOH A . F 5 HOH 15 256 17 HOH HOH A . F 5 HOH 16 257 18 HOH HOH A . F 5 HOH 17 258 19 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 139 A MSE 140 ? MET SELENOMETHIONINE 2 A MSE 148 A MSE 149 ? MET SELENOMETHIONINE 3 A MSE 178 A MSE 179 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2230 ? 1 MORE -18 ? 1 'SSA (A^2)' 15560 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 41.2660000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 50.2775000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? F HOH . ? A HOH 245 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O3B ? B GDP . ? A GDP 401 ? 1_555 93.7 ? 2 O ? F HOH . ? A HOH 245 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 OG ? A SER 43 ? A SER 44 ? 1_555 103.2 ? 3 O3B ? B GDP . ? A GDP 401 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 OG ? A SER 43 ? A SER 44 ? 1_555 92.9 ? 4 O ? F HOH . ? A HOH 245 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 244 ? 1_555 84.8 ? 5 O3B ? B GDP . ? A GDP 401 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 244 ? 1_555 86.4 ? 6 OG ? A SER 43 ? A SER 44 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 244 ? 1_555 172.0 ? 7 O ? F HOH . ? A HOH 245 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 OG1 ? A THR 65 ? A THR 66 ? 1_555 85.6 ? 8 O3B ? B GDP . ? A GDP 401 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 OG1 ? A THR 65 ? A THR 66 ? 1_555 179.2 ? 9 OG ? A SER 43 ? A SER 44 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 OG1 ? A THR 65 ? A THR 66 ? 1_555 87.7 ? 10 O ? F HOH . ? A HOH 244 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 OG1 ? A THR 65 ? A THR 66 ? 1_555 93.0 ? 11 O ? F HOH . ? A HOH 245 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 243 ? 1_555 171.6 ? 12 O3B ? B GDP . ? A GDP 401 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 243 ? 1_555 87.6 ? 13 OG ? A SER 43 ? A SER 44 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 243 ? 1_555 85.0 ? 14 O ? F HOH . ? A HOH 244 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 243 ? 1_555 87.0 ? 15 OG1 ? A THR 65 ? A THR 66 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 243 ? 1_555 92.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 13.1023 _pdbx_refine_tls.origin_y 36.3916 _pdbx_refine_tls.origin_z 11.1784 _pdbx_refine_tls.T[1][1] 0.0679 _pdbx_refine_tls.T[2][2] 0.0404 _pdbx_refine_tls.T[3][3] 0.0591 _pdbx_refine_tls.T[1][2] -0.0281 _pdbx_refine_tls.T[1][3] 0.0254 _pdbx_refine_tls.T[2][3] -0.0147 _pdbx_refine_tls.L[1][1] 2.4764 _pdbx_refine_tls.L[2][2] 3.0016 _pdbx_refine_tls.L[3][3] 5.0453 _pdbx_refine_tls.L[1][2] -0.4899 _pdbx_refine_tls.L[1][3] 0.7444 _pdbx_refine_tls.L[2][3] 0.0434 _pdbx_refine_tls.S[1][1] 0.0047 _pdbx_refine_tls.S[2][2] -0.0751 _pdbx_refine_tls.S[3][3] 0.0704 _pdbx_refine_tls.S[1][2] -0.0388 _pdbx_refine_tls.S[1][3] -0.0838 _pdbx_refine_tls.S[2][3] 0.2505 _pdbx_refine_tls.S[2][1] -0.1177 _pdbx_refine_tls.S[3][1] 0.3410 _pdbx_refine_tls.S[3][2] -0.3253 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id -10 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 9999 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method sad # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 REFMAC 5.5.0102 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 77 ? ? 52.63 -125.97 2 1 THR A 127 ? ? -125.77 -69.73 3 1 GLU A 128 ? ? -135.59 -66.47 4 1 ASN A 216 ? ? -66.07 95.22 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 29 ? OG ? A SER 28 OG 2 1 Y 1 A LYS 38 ? CD ? A LYS 37 CD 3 1 Y 1 A LYS 38 ? CE ? A LYS 37 CE 4 1 Y 1 A LYS 38 ? NZ ? A LYS 37 NZ 5 1 Y 1 A LYS 54 ? CD ? A LYS 53 CD 6 1 Y 1 A LYS 54 ? CE ? A LYS 53 CE 7 1 Y 1 A LYS 54 ? NZ ? A LYS 53 NZ 8 1 Y 1 A LYS 67 ? CG ? A LYS 66 CG 9 1 Y 1 A LYS 67 ? CD ? A LYS 66 CD 10 1 Y 1 A LYS 67 ? CE ? A LYS 66 CE 11 1 Y 1 A LYS 67 ? NZ ? A LYS 66 NZ 12 1 Y 1 A LYS 68 ? CG ? A LYS 67 CG 13 1 Y 1 A LYS 68 ? CD ? A LYS 67 CD 14 1 Y 1 A LYS 68 ? CE ? A LYS 67 CE 15 1 Y 1 A LYS 68 ? NZ ? A LYS 67 NZ 16 1 Y 1 A GLU 70 ? CG ? A GLU 69 CG 17 1 Y 1 A GLU 70 ? CD ? A GLU 69 CD 18 1 Y 1 A GLU 70 ? OE1 ? A GLU 69 OE1 19 1 Y 1 A GLU 70 ? OE2 ? A GLU 69 OE2 20 1 Y 1 A SER 75 ? OG ? A SER 74 OG 21 1 Y 1 A LYS 77 ? CE ? A LYS 76 CE 22 1 Y 1 A LYS 77 ? NZ ? A LYS 76 NZ 23 1 Y 1 A GLU 78 ? CG ? A GLU 77 CG 24 1 Y 1 A GLU 78 ? CD ? A GLU 77 CD 25 1 Y 1 A GLU 78 ? OE1 ? A GLU 77 OE1 26 1 Y 1 A GLU 78 ? OE2 ? A GLU 77 OE2 27 1 Y 1 A ASN 96 ? CG ? A ASN 95 CG 28 1 Y 1 A ASN 96 ? OD1 ? A ASN 95 OD1 29 1 Y 1 A ASN 96 ? ND2 ? A ASN 95 ND2 30 1 Y 1 A GLU 98 ? CG ? A GLU 97 CG 31 1 Y 1 A GLU 98 ? CD ? A GLU 97 CD 32 1 Y 1 A GLU 98 ? OE1 ? A GLU 97 OE1 33 1 Y 1 A GLU 98 ? OE2 ? A GLU 97 OE2 34 1 Y 1 A LYS 101 ? CG ? A LYS 100 CG 35 1 Y 1 A LYS 101 ? CD ? A LYS 100 CD 36 1 Y 1 A LYS 101 ? CE ? A LYS 100 CE 37 1 Y 1 A LYS 101 ? NZ ? A LYS 100 NZ 38 1 Y 1 A THR 127 ? OG1 ? A THR 126 OG1 39 1 Y 1 A THR 127 ? CG2 ? A THR 126 CG2 40 1 Y 1 A GLU 128 ? CG ? A GLU 127 CG 41 1 Y 1 A GLU 128 ? CD ? A GLU 127 CD 42 1 Y 1 A GLU 128 ? OE1 ? A GLU 127 OE1 43 1 Y 1 A GLU 128 ? OE2 ? A GLU 127 OE2 44 1 Y 1 A GLU 129 ? CG ? A GLU 128 CG 45 1 Y 1 A GLU 129 ? CD ? A GLU 128 CD 46 1 Y 1 A GLU 129 ? OE1 ? A GLU 128 OE1 47 1 Y 1 A GLU 129 ? OE2 ? A GLU 128 OE2 48 1 Y 1 A GLU 130 ? CG ? A GLU 129 CG 49 1 Y 1 A GLU 130 ? CD ? A GLU 129 CD 50 1 Y 1 A GLU 130 ? OE1 ? A GLU 129 OE1 51 1 Y 1 A GLU 130 ? OE2 ? A GLU 129 OE2 52 1 Y 1 A HIS 131 ? CG ? A HIS 130 CG 53 1 Y 1 A HIS 131 ? ND1 ? A HIS 130 ND1 54 1 Y 1 A HIS 131 ? CD2 ? A HIS 130 CD2 55 1 Y 1 A HIS 131 ? CE1 ? A HIS 130 CE1 56 1 Y 1 A HIS 131 ? NE2 ? A HIS 130 NE2 57 1 Y 1 A LYS 132 ? CG ? A LYS 131 CG 58 1 Y 1 A LYS 132 ? CD ? A LYS 131 CD 59 1 Y 1 A LYS 132 ? CE ? A LYS 131 CE 60 1 Y 1 A LYS 132 ? NZ ? A LYS 131 NZ 61 1 Y 1 A GLU 135 ? CG ? A GLU 134 CG 62 1 Y 1 A GLU 135 ? CD ? A GLU 134 CD 63 1 Y 1 A GLU 135 ? OE1 ? A GLU 134 OE1 64 1 Y 1 A GLU 135 ? OE2 ? A GLU 134 OE2 65 1 Y 1 A LYS 136 ? CG ? A LYS 135 CG 66 1 Y 1 A LYS 136 ? CD ? A LYS 135 CD 67 1 Y 1 A LYS 136 ? CE ? A LYS 135 CE 68 1 Y 1 A LYS 136 ? NZ ? A LYS 135 NZ 69 1 Y 1 A LYS 139 ? CG ? A LYS 138 CG 70 1 Y 1 A LYS 139 ? CD ? A LYS 138 CD 71 1 Y 1 A LYS 139 ? CE ? A LYS 138 CE 72 1 Y 1 A LYS 139 ? NZ ? A LYS 138 NZ 73 1 Y 1 A ARG 144 ? CG ? A ARG 143 CG 74 1 Y 1 A ARG 144 ? CD ? A ARG 143 CD 75 1 Y 1 A ARG 144 ? NE ? A ARG 143 NE 76 1 Y 1 A ARG 144 ? CZ ? A ARG 143 CZ 77 1 Y 1 A ARG 144 ? NH1 ? A ARG 143 NH1 78 1 Y 1 A ARG 144 ? NH2 ? A ARG 143 NH2 79 1 Y 1 A GLU 173 ? CG ? A GLU 172 CG 80 1 Y 1 A GLU 173 ? CD ? A GLU 172 CD 81 1 Y 1 A GLU 173 ? OE1 ? A GLU 172 OE1 82 1 Y 1 A GLU 173 ? OE2 ? A GLU 172 OE2 83 1 Y 1 A ARG 214 ? CG ? A ARG 213 CG 84 1 Y 1 A ARG 214 ? CD ? A ARG 213 CD 85 1 Y 1 A ARG 214 ? NE ? A ARG 213 NE 86 1 Y 1 A ARG 214 ? CZ ? A ARG 213 CZ 87 1 Y 1 A ARG 214 ? NH1 ? A ARG 213 NH1 88 1 Y 1 A ARG 214 ? NH2 ? A ARG 213 NH2 89 1 Y 1 A LYS 217 ? CG ? A LYS 216 CG 90 1 Y 1 A LYS 217 ? CD ? A LYS 216 CD 91 1 Y 1 A LYS 217 ? CE ? A LYS 216 CE 92 1 Y 1 A LYS 217 ? NZ ? A LYS 216 NZ 93 1 Y 1 A GLU 218 ? CG ? A GLU 217 CG 94 1 Y 1 A GLU 218 ? CD ? A GLU 217 CD 95 1 Y 1 A GLU 218 ? OE1 ? A GLU 217 OE1 96 1 Y 1 A GLU 218 ? OE2 ? A GLU 217 OE2 97 1 Y 1 A CYS 220 ? SG ? A CYS 219 SG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 2 ? A MSE 1 2 1 Y 1 A HIS 3 ? A HIS 2 3 1 Y 1 A HIS 4 ? A HIS 3 4 1 Y 1 A HIS 5 ? A HIS 4 5 1 Y 1 A HIS 6 ? A HIS 5 6 1 Y 1 A HIS 7 ? A HIS 6 7 1 Y 1 A HIS 8 ? A HIS 7 8 1 Y 1 A SER 9 ? A SER 8 9 1 Y 1 A SER 10 ? A SER 9 10 1 Y 1 A GLY 11 ? A GLY 10 11 1 Y 1 A ARG 12 ? A ARG 11 12 1 Y 1 A GLU 13 ? A GLU 12 13 1 Y 1 A ASN 14 ? A ASN 13 14 1 Y 1 A LEU 15 ? A LEU 14 15 1 Y 1 A TYR 16 ? A TYR 15 16 1 Y 1 A PHE 17 ? A PHE 16 17 1 Y 1 A GLN 18 ? A GLN 17 18 1 Y 1 A GLY 19 ? A GLY 18 19 1 Y 1 A GLY 20 ? A GLY 19 20 1 Y 1 A PRO 21 ? A PRO 20 21 1 Y 1 A GLY 22 ? A GLY 21 22 1 Y 1 A ARG 23 ? A ARG 22 23 1 Y 1 A GLN 24 ? A GLN 23 24 1 Y 1 A GLU 25 ? A GLU 24 25 1 Y 1 A PRO 26 ? A PRO 25 26 1 Y 1 A ARG 27 ? A ARG 26 27 1 Y 1 A ASN 28 ? A ASN 27 28 1 Y 1 A GLY 59 ? A GLY 58 29 1 Y 1 A THR 60 ? A THR 59 30 1 Y 1 A ALA 61 ? A ALA 60 31 1 Y 1 A ALA 62 ? A ALA 61 32 1 Y 1 A LYS 63 ? A LYS 62 33 1 Y 1 A SER 64 ? A SER 63 34 1 Y 1 A ILE 65 ? A ILE 64 35 1 Y 1 A ASP 91 ? A ASP 90 36 1 Y 1 A THR 92 ? A THR 91 37 1 Y 1 A GLU 93 ? A GLU 92 38 1 Y 1 A VAL 94 ? A VAL 93 39 1 Y 1 A PRO 95 ? A PRO 94 40 1 Y 1 A GLY 160 ? A GLY 159 41 1 Y 1 A ASP 161 ? A ASP 160 42 1 Y 1 A THR 162 ? A THR 161 43 1 Y 1 A ASN 163 ? A ASN 162 44 1 Y 1 A LEU 164 ? A LEU 163 45 1 Y 1 A HIS 165 ? A HIS 164 46 1 Y 1 A ASP 166 ? A ASP 165 47 1 Y 1 A TYR 167 ? A TYR 166 48 1 Y 1 A LEU 168 ? A LEU 167 49 1 Y 1 A ARG 169 ? A ARG 168 50 1 Y 1 A GLU 170 ? A GLU 169 51 1 Y 1 A ALA 171 ? A ALA 170 52 1 Y 1 A THR 222 ? A THR 221 53 1 Y 1 A ASN 223 ? A ASN 222 54 1 Y 1 A ARG 224 ? A ARG 223 55 1 Y 1 A MSE 225 ? A MSE 224 56 1 Y 1 A TYR 226 ? A TYR 225 57 1 Y 1 A GLN 227 ? A GLN 226 58 1 Y 1 A ARG 228 ? A ARG 227 59 1 Y 1 A ALA 229 ? A ALA 228 60 1 Y 1 A GLU 230 ? A GLU 229 61 1 Y 1 A GLU 231 ? A GLU 230 62 1 Y 1 A GLU 232 ? A GLU 231 63 1 Y 1 A ILE 233 ? A ILE 232 64 1 Y 1 A GLN 234 ? A GLN 233 65 1 Y 1 A LYS 235 ? A LYS 234 66 1 Y 1 A GLN 236 ? A GLN 235 67 1 Y 1 A THR 237 ? A THR 236 68 1 Y 1 A GLN 238 ? A GLN 237 69 1 Y 1 A ALA 239 ? A ALA 238 70 1 Y 1 A MSE 240 ? A MSE 239 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'MAGNESIUM ION' MG 4 'UNKNOWN ATOM OR ION' UNX 5 water HOH #