data_3LYY # _entry.id 3LYY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3LYY RCSB RCSB057901 WWPDB D_1000057901 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id PtR41A _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3LYY _pdbx_database_status.recvd_initial_deposition_date 2010-02-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Seetharaman, J.' 1 'Lew, S.' 2 'Wang, D.' 3 'Janjua, H.' 4 'Cunningham, K.' 5 'Owens, L.' 6 'Xiao, R.' 7 'Liu, J.' 8 'Baran, M.C.' 9 'Acton, T.B.' 10 'Montelione, G.T.' 11 'Tong, L.' 12 'Hunt, J.F.' 13 'Northeast Structural Genomics Consortium (NESG)' 14 # _citation.id primary _citation.title ;Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Seetharaman, J.' 1 primary 'Lew, S.' 2 primary 'Wang, D.' 3 primary 'Janjua, H.' 4 primary 'Cunningham, K.' 5 primary 'Owens, L.' 6 primary 'Xiao, R.' 7 primary 'Liu, J.' 8 primary 'Baran, M.C.' 9 primary 'Acton, T.B.' 10 primary 'Montelione, G.T.' 11 primary 'Tong, L.' 12 primary 'Hunt, J.F.' 13 # _cell.entry_id 3LYY _cell.length_a 90.634 _cell.length_b 90.634 _cell.length_c 56.991 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3LYY _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Adhesion exoprotein' 11544.041 2 ? ? 'sequence database residues 796-902' ? 2 water nat water 18.015 304 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;THATSTETIHYVNEDGDQVFEDGGGKLDFTRTVTIDDVTNEVVEYGEWTPVTDDEFAAVTSPDKDGYTPDTSEVAAQKPD (MSE)TDGPDGTVKDVEVTVTYTANPAVATI ; _entity_poly.pdbx_seq_one_letter_code_can ;THATSTETIHYVNEDGDQVFEDGGGKLDFTRTVTIDDVTNEVVEYGEWTPVTDDEFAAVTSPDKDGYTPDTSEVAAQKPD MTDGPDGTVKDVEVTVTYTANPAVATI ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier PtR41A # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 HIS n 1 3 ALA n 1 4 THR n 1 5 SER n 1 6 THR n 1 7 GLU n 1 8 THR n 1 9 ILE n 1 10 HIS n 1 11 TYR n 1 12 VAL n 1 13 ASN n 1 14 GLU n 1 15 ASP n 1 16 GLY n 1 17 ASP n 1 18 GLN n 1 19 VAL n 1 20 PHE n 1 21 GLU n 1 22 ASP n 1 23 GLY n 1 24 GLY n 1 25 GLY n 1 26 LYS n 1 27 LEU n 1 28 ASP n 1 29 PHE n 1 30 THR n 1 31 ARG n 1 32 THR n 1 33 VAL n 1 34 THR n 1 35 ILE n 1 36 ASP n 1 37 ASP n 1 38 VAL n 1 39 THR n 1 40 ASN n 1 41 GLU n 1 42 VAL n 1 43 VAL n 1 44 GLU n 1 45 TYR n 1 46 GLY n 1 47 GLU n 1 48 TRP n 1 49 THR n 1 50 PRO n 1 51 VAL n 1 52 THR n 1 53 ASP n 1 54 ASP n 1 55 GLU n 1 56 PHE n 1 57 ALA n 1 58 ALA n 1 59 VAL n 1 60 THR n 1 61 SER n 1 62 PRO n 1 63 ASP n 1 64 LYS n 1 65 ASP n 1 66 GLY n 1 67 TYR n 1 68 THR n 1 69 PRO n 1 70 ASP n 1 71 THR n 1 72 SER n 1 73 GLU n 1 74 VAL n 1 75 ALA n 1 76 ALA n 1 77 GLN n 1 78 LYS n 1 79 PRO n 1 80 ASP n 1 81 MSE n 1 82 THR n 1 83 ASP n 1 84 GLY n 1 85 PRO n 1 86 ASP n 1 87 GLY n 1 88 THR n 1 89 VAL n 1 90 LYS n 1 91 ASP n 1 92 VAL n 1 93 GLU n 1 94 VAL n 1 95 THR n 1 96 VAL n 1 97 THR n 1 98 TYR n 1 99 THR n 1 100 ALA n 1 101 ASN n 1 102 PRO n 1 103 ALA n 1 104 VAL n 1 105 ALA n 1 106 THR n 1 107 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PEPE_0118 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 25745 / 183-1w' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pediococcus pentosaceus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 278197 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q03HU7_PEDPA _struct_ref.pdbx_db_accession Q03HU7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;THATSTETIHYVNEDGDQVFEDGGGKLDFTRTVTIDDVTNEVVEYGEWTPVTDDEFAAVTSPDKDGYTPDTSEVAAQKPD MTDGPDGTVKDVEVTVTYTANPAVATI ; _struct_ref.pdbx_align_begin 796 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3LYY A 1 ? 107 ? Q03HU7 796 ? 902 ? 1 107 2 1 3LYY B 1 ? 107 ? Q03HU7 796 ? 902 ? 1 107 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3LYY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_percent_sol 57.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details '1.5M (NH4)2SO4, 20% PEG3000, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2010-02-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.entry_id 3LYY _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.75 _reflns.number_obs 52646 _reflns.number_all 52646 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value 0.053 _reflns.pdbx_netI_over_sigmaI 18.2 _reflns.B_iso_Wilson_estimate 4.8 _reflns.pdbx_redundancy 1.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.78 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.35 _reflns_shell.pdbx_Rsym_value 0.34 _reflns_shell.meanI_over_sigI_obs 15.0 _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2701 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3LYY _refine.ls_number_reflns_obs 40192 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 93956.45 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.32 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 97.4 _refine.ls_R_factor_obs 0.194 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.239 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 3954 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 21.7 _refine.aniso_B[1][1] 3.48 _refine.aniso_B[2][2] 3.48 _refine.aniso_B[3][3] -6.96 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 50.5872 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3LYY _refine_analyze.Luzzati_coordinate_error_obs 0.21 _refine_analyze.Luzzati_sigma_a_obs 0.12 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.14 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1535 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 304 _refine_hist.number_atoms_total 1839 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 32.32 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.76 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_restr_ncs.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr_ncs.dom_id 1 _refine_ls_restr_ncs.ncs_model_details NONE _refine_ls_restr_ncs.rms_dev_position ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_type . _refine_ls_restr_ncs.pdbx_auth_asym_id . _refine_ls_restr_ncs.pdbx_ens_id 1 _refine_ls_restr_ncs.pdbx_number ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work 5819 _refine_ls_shell.R_factor_R_work 0.214 _refine_ls_shell.percent_reflns_obs 93.9 _refine_ls_shell.R_factor_R_free 0.262 _refine_ls_shell.R_factor_R_free_error 0.010 _refine_ls_shell.percent_reflns_R_free 10.0 _refine_ls_shell.number_reflns_R_free 649 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3LYY _struct.title ;Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A ; _struct.pdbx_descriptor 'Adhesion exoprotein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3LYY _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text ;Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, Cell wall, Peptidoglycan-anchor, CELL ADHESION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASP 80 C ? ? ? 1_555 A MSE 81 N ? ? A ASP 80 A MSE 81 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 81 C ? ? ? 1_555 A THR 82 N ? ? A MSE 81 A THR 82 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? B ASP 80 C ? ? ? 1_555 B MSE 81 N ? ? B ASP 80 B MSE 81 1_555 ? ? ? ? ? ? ? 1.327 ? covale4 covale ? ? B MSE 81 C ? ? ? 1_555 B THR 82 N ? ? B MSE 81 B THR 82 1_555 ? ? ? ? ? ? ? 1.326 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 101 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 101 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 102 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 102 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? D ? 5 ? E ? 2 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 49 ? PRO A 50 ? THR A 49 PRO A 50 A 2 GLN A 18 ? THR A 30 ? GLN A 18 THR A 30 A 3 THR A 4 ? ASN A 13 ? THR A 4 ASN A 13 A 4 VAL A 92 ? ALA A 100 ? VAL A 92 ALA A 100 A 5 TYR A 67 ? PRO A 69 ? TYR A 67 PRO A 69 B 1 VAL A 33 ? ILE A 35 ? VAL A 33 ILE A 35 B 2 VAL A 42 ? TYR A 45 ? VAL A 42 TYR A 45 C 1 VAL A 59 ? THR A 60 ? VAL A 59 THR A 60 C 2 GLU A 73 ? VAL A 74 ? GLU A 73 VAL A 74 D 1 THR B 49 ? PRO B 50 ? THR B 49 PRO B 50 D 2 GLY B 23 ? THR B 30 ? GLY B 23 THR B 30 D 3 THR B 4 ? ASN B 13 ? THR B 4 ASN B 13 D 4 VAL B 92 ? ALA B 100 ? VAL B 92 ALA B 100 D 5 TYR B 67 ? PRO B 69 ? TYR B 67 PRO B 69 E 1 VAL B 33 ? ILE B 35 ? VAL B 33 ILE B 35 E 2 VAL B 42 ? TYR B 45 ? VAL B 42 TYR B 45 F 1 VAL B 59 ? THR B 60 ? VAL B 59 THR B 60 F 2 GLU B 73 ? VAL B 74 ? GLU B 73 VAL B 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 49 ? O THR A 49 N THR A 30 ? N THR A 30 A 2 3 O GLY A 25 ? O GLY A 25 N GLU A 7 ? N GLU A 7 A 3 4 N VAL A 12 ? N VAL A 12 O TYR A 98 ? O TYR A 98 A 4 5 O THR A 99 ? O THR A 99 N THR A 68 ? N THR A 68 B 1 2 N THR A 34 ? N THR A 34 O VAL A 43 ? O VAL A 43 C 1 2 N VAL A 59 ? N VAL A 59 O VAL A 74 ? O VAL A 74 D 1 2 O THR B 49 ? O THR B 49 N THR B 30 ? N THR B 30 D 2 3 O LEU B 27 ? O LEU B 27 N SER B 5 ? N SER B 5 D 3 4 N VAL B 12 ? N VAL B 12 O TYR B 98 ? O TYR B 98 D 4 5 O THR B 99 ? O THR B 99 N THR B 68 ? N THR B 68 E 1 2 N THR B 34 ? N THR B 34 O VAL B 43 ? O VAL B 43 F 1 2 N VAL B 59 ? N VAL B 59 O VAL B 74 ? O VAL B 74 # _database_PDB_matrix.entry_id 3LYY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3LYY _atom_sites.fract_transf_matrix[1][1] 0.011033 _atom_sites.fract_transf_matrix[1][2] 0.006370 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012740 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017547 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 HIS 2 2 2 HIS HIS A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 HIS 10 10 10 HIS HIS A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 TRP 48 48 48 TRP TRP A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 MSE 81 81 81 MSE MSE A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 ALA 103 103 ? ? ? A . n A 1 104 VAL 104 104 ? ? ? A . n A 1 105 ALA 105 105 ? ? ? A . n A 1 106 THR 106 106 ? ? ? A . n A 1 107 ILE 107 107 ? ? ? A . n B 1 1 THR 1 1 ? ? ? B . n B 1 2 HIS 2 2 ? ? ? B . n B 1 3 ALA 3 3 3 ALA ALA B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 SER 5 5 5 SER SER B . n B 1 6 THR 6 6 6 THR THR B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 ILE 9 9 9 ILE ILE B . n B 1 10 HIS 10 10 10 HIS HIS B . n B 1 11 TYR 11 11 11 TYR TYR B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 ASP 15 15 15 ASP ASP B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 VAL 19 19 19 VAL VAL B . n B 1 20 PHE 20 20 20 PHE PHE B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ASP 22 22 22 ASP ASP B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 ASP 28 28 28 ASP ASP B . n B 1 29 PHE 29 29 29 PHE PHE B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 ARG 31 31 31 ARG ARG B . n B 1 32 THR 32 32 32 THR THR B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 THR 34 34 34 THR THR B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 ASP 36 36 36 ASP ASP B . n B 1 37 ASP 37 37 37 ASP ASP B . n B 1 38 VAL 38 38 38 VAL VAL B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 GLU 41 41 41 GLU GLU B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 VAL 43 43 43 VAL VAL B . n B 1 44 GLU 44 44 44 GLU GLU B . n B 1 45 TYR 45 45 45 TYR TYR B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 GLU 47 47 47 GLU GLU B . n B 1 48 TRP 48 48 48 TRP TRP B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 PRO 50 50 50 PRO PRO B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 THR 52 52 52 THR THR B . n B 1 53 ASP 53 53 53 ASP ASP B . n B 1 54 ASP 54 54 54 ASP ASP B . n B 1 55 GLU 55 55 55 GLU GLU B . n B 1 56 PHE 56 56 56 PHE PHE B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 ALA 58 58 58 ALA ALA B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 THR 60 60 60 THR THR B . n B 1 61 SER 61 61 61 SER SER B . n B 1 62 PRO 62 62 62 PRO PRO B . n B 1 63 ASP 63 63 63 ASP ASP B . n B 1 64 LYS 64 64 64 LYS LYS B . n B 1 65 ASP 65 65 65 ASP ASP B . n B 1 66 GLY 66 66 66 GLY GLY B . n B 1 67 TYR 67 67 67 TYR TYR B . n B 1 68 THR 68 68 68 THR THR B . n B 1 69 PRO 69 69 69 PRO PRO B . n B 1 70 ASP 70 70 70 ASP ASP B . n B 1 71 THR 71 71 71 THR THR B . n B 1 72 SER 72 72 72 SER SER B . n B 1 73 GLU 73 73 73 GLU GLU B . n B 1 74 VAL 74 74 74 VAL VAL B . n B 1 75 ALA 75 75 75 ALA ALA B . n B 1 76 ALA 76 76 76 ALA ALA B . n B 1 77 GLN 77 77 77 GLN GLN B . n B 1 78 LYS 78 78 78 LYS LYS B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 ASP 80 80 80 ASP ASP B . n B 1 81 MSE 81 81 81 MSE MSE B . n B 1 82 THR 82 82 82 THR THR B . n B 1 83 ASP 83 83 83 ASP ASP B . n B 1 84 GLY 84 84 84 GLY GLY B . n B 1 85 PRO 85 85 85 PRO PRO B . n B 1 86 ASP 86 86 86 ASP ASP B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 THR 88 88 88 THR THR B . n B 1 89 VAL 89 89 89 VAL VAL B . n B 1 90 LYS 90 90 90 LYS LYS B . n B 1 91 ASP 91 91 91 ASP ASP B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 GLU 93 93 93 GLU GLU B . n B 1 94 VAL 94 94 94 VAL VAL B . n B 1 95 THR 95 95 95 THR THR B . n B 1 96 VAL 96 96 96 VAL VAL B . n B 1 97 THR 97 97 97 THR THR B . n B 1 98 TYR 98 98 98 TYR TYR B . n B 1 99 THR 99 99 99 THR THR B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 ASN 101 101 101 ASN ASN B . n B 1 102 PRO 102 102 102 PRO PRO B . n B 1 103 ALA 103 103 ? ? ? B . n B 1 104 VAL 104 104 ? ? ? B . n B 1 105 ALA 105 105 ? ? ? B . n B 1 106 THR 106 106 ? ? ? B . n B 1 107 ILE 107 107 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 81 A MSE 81 ? MET SELENOMETHIONINE 2 B MSE 81 B MSE 81 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 1 2 B,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1050 ? 1 MORE -6 ? 1 'SSA (A^2)' 12240 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_654 -x+1,-y,z-1 -1.0000000000 0.0000000000 0.0000000000 90.6340000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 -56.9910000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-04-07 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SHELXS phasing . ? 2 CNS refinement 1.2 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 ND2 _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 ASN _pdbx_validate_symm_contact.auth_seq_id_1 40 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 ND2 _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 ASN _pdbx_validate_symm_contact.auth_seq_id_2 40 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_655 _pdbx_validate_symm_contact.dist 1.77 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 52 ? ? -116.10 -98.06 2 1 ASP A 83 ? ? -102.99 -168.48 3 1 THR B 52 ? ? -122.83 -93.29 4 1 ASP B 83 ? ? -108.62 -162.98 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 103 ? A ALA 103 2 1 Y 1 A VAL 104 ? A VAL 104 3 1 Y 1 A ALA 105 ? A ALA 105 4 1 Y 1 A THR 106 ? A THR 106 5 1 Y 1 A ILE 107 ? A ILE 107 6 1 Y 1 B THR 1 ? B THR 1 7 1 Y 1 B HIS 2 ? B HIS 2 8 1 Y 1 B ALA 103 ? B ALA 103 9 1 Y 1 B VAL 104 ? B VAL 104 10 1 Y 1 B ALA 105 ? B ALA 105 11 1 Y 1 B THR 106 ? B THR 106 12 1 Y 1 B ILE 107 ? B ILE 107 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 108 2 HOH TIP A . C 2 HOH 2 109 3 HOH TIP A . C 2 HOH 3 110 4 HOH TIP A . C 2 HOH 4 111 111 HOH TIP A . C 2 HOH 5 112 5 HOH TIP A . C 2 HOH 6 113 113 HOH TIP A . C 2 HOH 7 114 7 HOH TIP A . C 2 HOH 8 115 10 HOH TIP A . C 2 HOH 9 116 15 HOH TIP A . C 2 HOH 10 117 17 HOH TIP A . C 2 HOH 11 118 18 HOH TIP A . C 2 HOH 12 119 119 HOH TIP A . C 2 HOH 13 120 19 HOH TIP A . C 2 HOH 14 121 22 HOH TIP A . C 2 HOH 15 122 23 HOH TIP A . C 2 HOH 16 123 123 HOH TIP A . C 2 HOH 17 124 124 HOH TIP A . C 2 HOH 18 125 27 HOH TIP A . C 2 HOH 19 126 126 HOH TIP A . C 2 HOH 20 127 127 HOH TIP A . C 2 HOH 21 128 128 HOH TIP A . C 2 HOH 22 129 129 HOH TIP A . C 2 HOH 23 130 28 HOH TIP A . C 2 HOH 24 131 30 HOH TIP A . C 2 HOH 25 132 32 HOH TIP A . C 2 HOH 26 133 133 HOH TIP A . C 2 HOH 27 134 134 HOH TIP A . C 2 HOH 28 135 135 HOH TIP A . C 2 HOH 29 136 136 HOH TIP A . C 2 HOH 30 137 34 HOH TIP A . C 2 HOH 31 138 138 HOH TIP A . C 2 HOH 32 139 37 HOH TIP A . C 2 HOH 33 140 140 HOH TIP A . C 2 HOH 34 141 141 HOH TIP A . C 2 HOH 35 142 142 HOH TIP A . C 2 HOH 36 143 38 HOH TIP A . C 2 HOH 37 144 39 HOH TIP A . C 2 HOH 38 145 145 HOH TIP A . C 2 HOH 39 146 146 HOH TIP A . C 2 HOH 40 147 44 HOH TIP A . C 2 HOH 41 148 45 HOH TIP A . C 2 HOH 42 149 149 HOH TIP A . C 2 HOH 43 150 150 HOH TIP A . C 2 HOH 44 151 46 HOH TIP A . C 2 HOH 45 152 49 HOH TIP A . C 2 HOH 46 153 153 HOH TIP A . C 2 HOH 47 154 154 HOH TIP A . C 2 HOH 48 155 155 HOH TIP A . C 2 HOH 49 156 50 HOH TIP A . C 2 HOH 50 157 157 HOH TIP A . C 2 HOH 51 158 158 HOH TIP A . C 2 HOH 52 159 159 HOH TIP A . C 2 HOH 53 160 160 HOH TIP A . C 2 HOH 54 161 161 HOH TIP A . C 2 HOH 55 162 52 HOH TIP A . C 2 HOH 56 163 163 HOH TIP A . C 2 HOH 57 164 53 HOH TIP A . C 2 HOH 58 165 54 HOH TIP A . C 2 HOH 59 166 166 HOH TIP A . C 2 HOH 60 167 55 HOH TIP A . C 2 HOH 61 168 58 HOH TIP A . C 2 HOH 62 169 169 HOH TIP A . C 2 HOH 63 170 62 HOH TIP A . C 2 HOH 64 171 63 HOH TIP A . C 2 HOH 65 172 172 HOH TIP A . C 2 HOH 66 173 69 HOH TIP A . C 2 HOH 67 174 70 HOH TIP A . C 2 HOH 68 175 175 HOH TIP A . C 2 HOH 69 176 176 HOH TIP A . C 2 HOH 70 177 74 HOH TIP A . C 2 HOH 71 178 178 HOH TIP A . C 2 HOH 72 179 179 HOH TIP A . C 2 HOH 73 180 75 HOH TIP A . C 2 HOH 74 181 181 HOH TIP A . C 2 HOH 75 182 182 HOH TIP A . C 2 HOH 76 183 183 HOH TIP A . C 2 HOH 77 184 76 HOH TIP A . C 2 HOH 78 185 185 HOH TIP A . C 2 HOH 79 186 186 HOH TIP A . C 2 HOH 80 187 81 HOH TIP A . C 2 HOH 81 188 188 HOH TIP A . C 2 HOH 82 189 189 HOH TIP A . C 2 HOH 83 190 85 HOH TIP A . C 2 HOH 84 191 88 HOH TIP A . C 2 HOH 85 192 89 HOH TIP A . C 2 HOH 86 193 90 HOH TIP A . C 2 HOH 87 194 194 HOH TIP A . C 2 HOH 88 195 98 HOH TIP A . C 2 HOH 89 196 100 HOH TIP A . C 2 HOH 90 197 103 HOH TIP A . C 2 HOH 91 198 106 HOH TIP A . C 2 HOH 92 199 199 HOH TIP A . C 2 HOH 93 200 200 HOH TIP A . C 2 HOH 94 201 201 HOH TIP A . C 2 HOH 95 202 107 HOH TIP A . C 2 HOH 96 209 209 HOH TIP A . C 2 HOH 97 210 210 HOH TIP A . C 2 HOH 98 211 211 HOH TIP A . C 2 HOH 99 214 214 HOH TIP A . C 2 HOH 100 215 215 HOH TIP A . C 2 HOH 101 216 216 HOH TIP A . C 2 HOH 102 217 217 HOH TIP A . C 2 HOH 103 220 220 HOH TIP A . C 2 HOH 104 221 221 HOH TIP A . C 2 HOH 105 222 222 HOH TIP A . C 2 HOH 106 223 223 HOH TIP A . C 2 HOH 107 225 225 HOH TIP A . C 2 HOH 108 228 228 HOH TIP A . C 2 HOH 109 229 229 HOH TIP A . C 2 HOH 110 230 230 HOH TIP A . C 2 HOH 111 231 231 HOH TIP A . C 2 HOH 112 233 233 HOH TIP A . C 2 HOH 113 234 234 HOH TIP A . C 2 HOH 114 235 235 HOH TIP A . C 2 HOH 115 236 236 HOH TIP A . C 2 HOH 116 239 239 HOH TIP A . C 2 HOH 117 240 240 HOH TIP A . C 2 HOH 118 241 241 HOH TIP A . C 2 HOH 119 243 243 HOH TIP A . C 2 HOH 120 246 246 HOH TIP A . C 2 HOH 121 247 247 HOH TIP A . C 2 HOH 122 249 249 HOH TIP A . C 2 HOH 123 250 250 HOH TIP A . C 2 HOH 124 252 252 HOH TIP A . C 2 HOH 125 254 254 HOH TIP A . C 2 HOH 126 260 260 HOH TIP A . C 2 HOH 127 262 262 HOH TIP A . C 2 HOH 128 263 263 HOH TIP A . C 2 HOH 129 264 264 HOH TIP A . C 2 HOH 130 265 265 HOH TIP A . C 2 HOH 131 268 268 HOH TIP A . C 2 HOH 132 269 269 HOH TIP A . C 2 HOH 133 270 270 HOH TIP A . C 2 HOH 134 272 272 HOH TIP A . C 2 HOH 135 277 277 HOH TIP A . C 2 HOH 136 278 278 HOH TIP A . C 2 HOH 137 282 282 HOH TIP A . C 2 HOH 138 283 283 HOH TIP A . C 2 HOH 139 287 287 HOH TIP A . C 2 HOH 140 288 288 HOH TIP A . C 2 HOH 141 289 289 HOH TIP A . C 2 HOH 142 291 291 HOH TIP A . C 2 HOH 143 292 292 HOH TIP A . C 2 HOH 144 293 293 HOH TIP A . C 2 HOH 145 294 294 HOH TIP A . C 2 HOH 146 295 295 HOH TIP A . C 2 HOH 147 296 296 HOH TIP A . C 2 HOH 148 297 297 HOH TIP A . C 2 HOH 149 299 299 HOH TIP A . C 2 HOH 150 300 300 HOH TIP A . C 2 HOH 151 301 301 HOH TIP A . C 2 HOH 152 302 302 HOH TIP A . C 2 HOH 153 303 303 HOH TIP A . D 2 HOH 1 108 108 HOH TIP B . D 2 HOH 2 109 109 HOH TIP B . D 2 HOH 3 110 110 HOH TIP B . D 2 HOH 4 111 1 HOH TIP B . D 2 HOH 5 112 112 HOH TIP B . D 2 HOH 6 113 6 HOH TIP B . D 2 HOH 7 114 114 HOH TIP B . D 2 HOH 8 115 115 HOH TIP B . D 2 HOH 9 116 116 HOH TIP B . D 2 HOH 10 117 117 HOH TIP B . D 2 HOH 11 118 118 HOH TIP B . D 2 HOH 12 119 8 HOH TIP B . D 2 HOH 13 120 120 HOH TIP B . D 2 HOH 14 121 121 HOH TIP B . D 2 HOH 15 122 122 HOH TIP B . D 2 HOH 16 123 9 HOH TIP B . D 2 HOH 17 124 11 HOH TIP B . D 2 HOH 18 125 125 HOH TIP B . D 2 HOH 19 126 12 HOH TIP B . D 2 HOH 20 127 13 HOH TIP B . D 2 HOH 21 128 14 HOH TIP B . D 2 HOH 22 129 16 HOH TIP B . D 2 HOH 23 130 130 HOH TIP B . D 2 HOH 24 131 131 HOH TIP B . D 2 HOH 25 132 132 HOH TIP B . D 2 HOH 26 133 20 HOH TIP B . D 2 HOH 27 134 21 HOH TIP B . D 2 HOH 28 135 24 HOH TIP B . D 2 HOH 29 136 25 HOH TIP B . D 2 HOH 30 137 137 HOH TIP B . D 2 HOH 31 138 26 HOH TIP B . D 2 HOH 32 139 139 HOH TIP B . D 2 HOH 33 140 29 HOH TIP B . D 2 HOH 34 141 31 HOH TIP B . D 2 HOH 35 142 33 HOH TIP B . D 2 HOH 36 143 143 HOH TIP B . D 2 HOH 37 144 144 HOH TIP B . D 2 HOH 38 145 35 HOH TIP B . D 2 HOH 39 146 36 HOH TIP B . D 2 HOH 40 147 147 HOH TIP B . D 2 HOH 41 148 148 HOH TIP B . D 2 HOH 42 149 40 HOH TIP B . D 2 HOH 43 150 41 HOH TIP B . D 2 HOH 44 151 151 HOH TIP B . D 2 HOH 45 152 152 HOH TIP B . D 2 HOH 46 153 42 HOH TIP B . D 2 HOH 47 154 43 HOH TIP B . D 2 HOH 48 155 47 HOH TIP B . D 2 HOH 49 156 156 HOH TIP B . D 2 HOH 50 157 48 HOH TIP B . D 2 HOH 51 158 51 HOH TIP B . D 2 HOH 52 159 56 HOH TIP B . D 2 HOH 53 160 57 HOH TIP B . D 2 HOH 54 161 59 HOH TIP B . D 2 HOH 55 162 162 HOH TIP B . D 2 HOH 56 163 60 HOH TIP B . D 2 HOH 57 164 164 HOH TIP B . D 2 HOH 58 165 165 HOH TIP B . D 2 HOH 59 166 61 HOH TIP B . D 2 HOH 60 167 167 HOH TIP B . D 2 HOH 61 168 168 HOH TIP B . D 2 HOH 62 169 64 HOH TIP B . D 2 HOH 63 170 170 HOH TIP B . D 2 HOH 64 171 171 HOH TIP B . D 2 HOH 65 172 65 HOH TIP B . D 2 HOH 66 173 173 HOH TIP B . D 2 HOH 67 174 174 HOH TIP B . D 2 HOH 68 175 66 HOH TIP B . D 2 HOH 69 176 67 HOH TIP B . D 2 HOH 70 177 177 HOH TIP B . D 2 HOH 71 178 68 HOH TIP B . D 2 HOH 72 179 71 HOH TIP B . D 2 HOH 73 180 180 HOH TIP B . D 2 HOH 74 181 72 HOH TIP B . D 2 HOH 75 182 73 HOH TIP B . D 2 HOH 76 183 77 HOH TIP B . D 2 HOH 77 184 184 HOH TIP B . D 2 HOH 78 185 78 HOH TIP B . D 2 HOH 79 186 79 HOH TIP B . D 2 HOH 80 187 187 HOH TIP B . D 2 HOH 81 188 80 HOH TIP B . D 2 HOH 82 189 82 HOH TIP B . D 2 HOH 83 190 190 HOH TIP B . D 2 HOH 84 191 191 HOH TIP B . D 2 HOH 85 192 192 HOH TIP B . D 2 HOH 86 193 193 HOH TIP B . D 2 HOH 87 194 83 HOH TIP B . D 2 HOH 88 195 195 HOH TIP B . D 2 HOH 89 196 196 HOH TIP B . D 2 HOH 90 197 197 HOH TIP B . D 2 HOH 91 198 198 HOH TIP B . D 2 HOH 92 199 84 HOH TIP B . D 2 HOH 93 200 86 HOH TIP B . D 2 HOH 94 201 87 HOH TIP B . D 2 HOH 95 202 202 HOH TIP B . D 2 HOH 96 203 203 HOH TIP B . D 2 HOH 97 204 204 HOH TIP B . D 2 HOH 98 205 205 HOH TIP B . D 2 HOH 99 206 206 HOH TIP B . D 2 HOH 100 207 207 HOH TIP B . D 2 HOH 101 208 208 HOH TIP B . D 2 HOH 102 209 91 HOH TIP B . D 2 HOH 103 210 92 HOH TIP B . D 2 HOH 104 211 93 HOH TIP B . D 2 HOH 105 212 212 HOH TIP B . D 2 HOH 106 213 213 HOH TIP B . D 2 HOH 107 214 94 HOH TIP B . D 2 HOH 108 215 95 HOH TIP B . D 2 HOH 109 216 96 HOH TIP B . D 2 HOH 110 217 97 HOH TIP B . D 2 HOH 111 218 218 HOH TIP B . D 2 HOH 112 219 219 HOH TIP B . D 2 HOH 113 220 99 HOH TIP B . D 2 HOH 114 221 101 HOH TIP B . D 2 HOH 115 222 102 HOH TIP B . D 2 HOH 116 223 104 HOH TIP B . D 2 HOH 117 224 224 HOH TIP B . D 2 HOH 118 225 105 HOH TIP B . D 2 HOH 119 226 226 HOH TIP B . D 2 HOH 120 227 227 HOH TIP B . D 2 HOH 121 232 232 HOH TIP B . D 2 HOH 122 237 237 HOH TIP B . D 2 HOH 123 238 238 HOH TIP B . D 2 HOH 124 242 242 HOH TIP B . D 2 HOH 125 244 244 HOH TIP B . D 2 HOH 126 245 245 HOH TIP B . D 2 HOH 127 248 248 HOH TIP B . D 2 HOH 128 251 251 HOH TIP B . D 2 HOH 129 253 253 HOH TIP B . D 2 HOH 130 255 255 HOH TIP B . D 2 HOH 131 256 256 HOH TIP B . D 2 HOH 132 257 257 HOH TIP B . D 2 HOH 133 258 258 HOH TIP B . D 2 HOH 134 259 259 HOH TIP B . D 2 HOH 135 261 261 HOH TIP B . D 2 HOH 136 266 266 HOH TIP B . D 2 HOH 137 267 267 HOH TIP B . D 2 HOH 138 271 271 HOH TIP B . D 2 HOH 139 273 273 HOH TIP B . D 2 HOH 140 274 274 HOH TIP B . D 2 HOH 141 275 275 HOH TIP B . D 2 HOH 142 276 276 HOH TIP B . D 2 HOH 143 279 279 HOH TIP B . D 2 HOH 144 280 280 HOH TIP B . D 2 HOH 145 281 281 HOH TIP B . D 2 HOH 146 284 284 HOH TIP B . D 2 HOH 147 285 285 HOH TIP B . D 2 HOH 148 286 286 HOH TIP B . D 2 HOH 149 290 290 HOH TIP B . D 2 HOH 150 298 298 HOH TIP B . D 2 HOH 151 304 304 HOH TIP B . #