data_3M5K # _entry.id 3M5K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3M5K pdb_00003m5k 10.2210/pdb3m5k/pdb RCSB RCSB058135 ? ? WWPDB D_1000058135 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 396612 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3M5K _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-03-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of Putative NADH dehydrogenase/NAD(P)H nitroreductase (BDI_1728) from Parabacteroides distasonis ATCC 8503 at 1.86 A resolution ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3M5K _cell.length_a 149.639 _cell.length_b 149.639 _cell.length_c 149.639 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3M5K _symmetry.space_group_name_H-M 'P 43 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative NADH dehydrogenase/NAD(P)H nitroreductase' 19982.137 2 ? ? 'sequence database residues 24-194' ? 2 non-polymer syn 'FLAVIN MONONUCLEOTIDE' 456.344 2 ? ? ? ? 3 non-polymer syn 'UNKNOWN LIGAND' ? 2 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 366 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GQEPENQTLETILNRKSVRKYKDRPVEKEKIDKLIRAG(MSE)AAPSSRDRRPWEFIIVTDRKALDT(MSE)AEGLPFAR (MSE)LKETRQAIVVCGDTIKSSNAWFLDCSAASQNLLLAAES(MSE)GLGAVWTAVYPYPDRIEIVRKELRLPDHI (MSE)PLNVIPVGYP(MSE)QKETPKNKYNVQQIHHNGW ; _entity_poly.pdbx_seq_one_letter_code_can ;GQEPENQTLETILNRKSVRKYKDRPVEKEKIDKLIRAGMAAPSSRDRRPWEFIIVTDRKALDTMAEGLPFARMLKETRQA IVVCGDTIKSSNAWFLDCSAASQNLLLAAESMGLGAVWTAVYPYPDRIEIVRKELRLPDHIMPLNVIPVGYPMQKETPKN KYNVQQIHHNGW ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 396612 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 GLU n 1 4 PRO n 1 5 GLU n 1 6 ASN n 1 7 GLN n 1 8 THR n 1 9 LEU n 1 10 GLU n 1 11 THR n 1 12 ILE n 1 13 LEU n 1 14 ASN n 1 15 ARG n 1 16 LYS n 1 17 SER n 1 18 VAL n 1 19 ARG n 1 20 LYS n 1 21 TYR n 1 22 LYS n 1 23 ASP n 1 24 ARG n 1 25 PRO n 1 26 VAL n 1 27 GLU n 1 28 LYS n 1 29 GLU n 1 30 LYS n 1 31 ILE n 1 32 ASP n 1 33 LYS n 1 34 LEU n 1 35 ILE n 1 36 ARG n 1 37 ALA n 1 38 GLY n 1 39 MSE n 1 40 ALA n 1 41 ALA n 1 42 PRO n 1 43 SER n 1 44 SER n 1 45 ARG n 1 46 ASP n 1 47 ARG n 1 48 ARG n 1 49 PRO n 1 50 TRP n 1 51 GLU n 1 52 PHE n 1 53 ILE n 1 54 ILE n 1 55 VAL n 1 56 THR n 1 57 ASP n 1 58 ARG n 1 59 LYS n 1 60 ALA n 1 61 LEU n 1 62 ASP n 1 63 THR n 1 64 MSE n 1 65 ALA n 1 66 GLU n 1 67 GLY n 1 68 LEU n 1 69 PRO n 1 70 PHE n 1 71 ALA n 1 72 ARG n 1 73 MSE n 1 74 LEU n 1 75 LYS n 1 76 GLU n 1 77 THR n 1 78 ARG n 1 79 GLN n 1 80 ALA n 1 81 ILE n 1 82 VAL n 1 83 VAL n 1 84 CYS n 1 85 GLY n 1 86 ASP n 1 87 THR n 1 88 ILE n 1 89 LYS n 1 90 SER n 1 91 SER n 1 92 ASN n 1 93 ALA n 1 94 TRP n 1 95 PHE n 1 96 LEU n 1 97 ASP n 1 98 CYS n 1 99 SER n 1 100 ALA n 1 101 ALA n 1 102 SER n 1 103 GLN n 1 104 ASN n 1 105 LEU n 1 106 LEU n 1 107 LEU n 1 108 ALA n 1 109 ALA n 1 110 GLU n 1 111 SER n 1 112 MSE n 1 113 GLY n 1 114 LEU n 1 115 GLY n 1 116 ALA n 1 117 VAL n 1 118 TRP n 1 119 THR n 1 120 ALA n 1 121 VAL n 1 122 TYR n 1 123 PRO n 1 124 TYR n 1 125 PRO n 1 126 ASP n 1 127 ARG n 1 128 ILE n 1 129 GLU n 1 130 ILE n 1 131 VAL n 1 132 ARG n 1 133 LYS n 1 134 GLU n 1 135 LEU n 1 136 ARG n 1 137 LEU n 1 138 PRO n 1 139 ASP n 1 140 HIS n 1 141 ILE n 1 142 MSE n 1 143 PRO n 1 144 LEU n 1 145 ASN n 1 146 VAL n 1 147 ILE n 1 148 PRO n 1 149 VAL n 1 150 GLY n 1 151 TYR n 1 152 PRO n 1 153 MSE n 1 154 GLN n 1 155 LYS n 1 156 GLU n 1 157 THR n 1 158 PRO n 1 159 LYS n 1 160 ASN n 1 161 LYS n 1 162 TYR n 1 163 ASN n 1 164 VAL n 1 165 GLN n 1 166 GLN n 1 167 ILE n 1 168 HIS n 1 169 HIS n 1 170 ASN n 1 171 GLY n 1 172 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BDI_1728 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8503 / DSM 20701 / NCTC 11152' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Parabacteroides distasonis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435591 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6LCR1_PARD8 _struct_ref.pdbx_db_accession A6LCR1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QEPENQTLETILNRKSVRKYKDRPVEKEKIDKLIRAGMAAPSSRDRRPWEFIIVTDRKALDTMAEGLPFARMLKETRQAI VVCGDTIKSSNAWFLDCSAASQNLLLAAESMGLGAVWTAVYPYPDRIEIVRKELRLPDHIMPLNVIPVGYPMQKETPKNK YNVQQIHHNGW ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3M5K A 2 ? 172 ? A6LCR1 24 ? 194 ? 24 194 2 1 3M5K B 2 ? 172 ? A6LCR1 24 ? 194 ? 24 194 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3M5K GLY A 1 ? UNP A6LCR1 ? ? 'expression tag' 0 1 2 3M5K GLY B 1 ? UNP A6LCR1 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMN non-polymer . 'FLAVIN MONONUCLEOTIDE' 'RIBOFLAVIN MONOPHOSPHATE' 'C17 H21 N4 O9 P' 456.344 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3M5K # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.49 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 64.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.47 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;14.0000% polyethylene glycol 1000, 0.3000M sodium chloride, 0.1M Na/K phosphate pH 6.47, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2009-11-06 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97946 1.0 3 0.97932 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91837,0.97946,0.97932 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3M5K _reflns.d_resolution_high 1.86 _reflns.d_resolution_low 29.347 _reflns.number_obs 48462 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_netI_over_sigmaI 12.700 _reflns.percent_possible_obs 99.800 _reflns.B_iso_Wilson_estimate 25.884 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 10.669 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.86 1.93 53090 ? 9448 0.821 2.1 ? ? ? ? ? 99.70 ? 1 1.93 2.00 47083 ? 8251 0.559 3.0 ? ? ? ? ? 99.90 ? 2 2.00 2.09 51744 ? 9038 0.405 4.0 ? ? ? ? ? 99.90 ? 3 2.09 2.20 52560 ? 9144 0.274 5.8 ? ? ? ? ? 99.90 ? 4 2.20 2.34 52131 ? 9278 0.210 7.9 ? ? ? ? ? 99.70 ? 5 2.34 2.52 52388 ? 9089 0.153 10.2 ? ? ? ? ? 99.90 ? 6 2.52 2.78 53743 ? 9338 0.110 14.3 ? ? ? ? ? 99.90 ? 7 2.78 3.18 51679 ? 9024 0.079 19.2 ? ? ? ? ? 100.00 ? 8 3.18 4.00 50394 ? 9069 0.053 27.0 ? ? ? ? ? 99.90 ? 9 4.00 29.347 51796 ? 9135 0.038 32.9 ? ? ? ? ? 99.40 ? 10 # _refine.entry_id 3M5K _refine.ls_d_res_high 1.860 _refine.ls_d_res_low 29.347 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.850 _refine.ls_number_reflns_obs 48417 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. FLAVIN MONONUCLEOTIDE COFACTOR (FMN) AND AN UNKNOWN LIGAND (UNL) ARE MODELED INTO THE PUTATIVE ACTIVE SITE ON EACH MONOMER. DURING THE REFINEMENT, THE FMN RESTRAINTS DICTIONARY WAS MODIFIED TO ALLOW BENDING OF THE ISOALLOXAZINE RING ALONG THE N5-N10 VIRTUAL AXIS RESULTING IN AN IMPROVED FIT BETWEEN THE FMN COORDINATES AND ELECTRON DENSITY. 4. CHLORIDE ION (CL) FROM CRYSTALLIZATION IS MODELED INTO THE STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.161 _refine.ls_R_factor_R_work 0.160 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.178 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2446 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 26.696 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.963 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.099 _refine.pdbx_overall_ESU_R_Free 0.092 _refine.overall_SU_ML 0.061 _refine.overall_SU_B 2.007 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 76.01 _refine.B_iso_min 10.66 _refine.occupancy_max 1.00 _refine.occupancy_min 0.30 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2676 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 79 _refine_hist.number_atoms_solvent 366 _refine_hist.number_atoms_total 3121 _refine_hist.d_res_high 1.860 _refine_hist.d_res_low 29.347 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 3152 0.016 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 2188 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 4330 1.434 1.993 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 5344 0.988 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 405 5.292 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 133 30.795 23.233 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 578 13.843 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 30 14.534 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 467 0.087 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 3589 0.007 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 621 0.002 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 672 0.224 0.200 ? ? r_nbd_other 'X-RAY DIFFRACTION' 2402 0.206 0.200 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 1539 0.170 0.200 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 1565 0.084 0.200 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 269 0.174 0.200 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 11 0.166 0.200 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 39 0.286 0.200 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 28 0.183 0.200 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 2121 1.951 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 738 0.563 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 3157 2.507 4.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 1395 3.383 5.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 1173 4.653 6.000 ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 'X-RAY DIFFRACTION' 1 1 'MEDIUM POSITIONAL' A 2612 ? 0.500 1 ? ? ? 'X-RAY DIFFRACTION' 1 1 'MEDIUM THERMAL' A 2612 ? 2.000 2 ? ? ? # _refine_ls_shell.d_res_high 1.860 _refine_ls_shell.d_res_low 1.908 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.860 _refine_ls_shell.number_reflns_R_work 3329 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.247 _refine_ls_shell.R_factor_R_free 0.274 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 180 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3509 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct_ncs_dom.pdbx_ens_id 1 _struct_ncs_dom.id 1 _struct_ncs_dom.details A # _struct_ncs_dom_lim.pdbx_ens_id 1 _struct_ncs_dom_lim.dom_id 1 _struct_ncs_dom_lim.pdbx_component_id 1 _struct_ncs_dom_lim.pdbx_refine_code 4 _struct_ncs_dom_lim.beg_auth_asym_id A _struct_ncs_dom_lim.beg_auth_seq_id 27 _struct_ncs_dom_lim.end_auth_asym_id A _struct_ncs_dom_lim.end_auth_seq_id 194 _struct_ncs_dom_lim.selection_details ? _struct_ncs_dom_lim.beg_label_asym_id . _struct_ncs_dom_lim.beg_label_comp_id . _struct_ncs_dom_lim.beg_label_seq_id . _struct_ncs_dom_lim.beg_label_alt_id . _struct_ncs_dom_lim.end_label_asym_id . _struct_ncs_dom_lim.end_label_comp_id . _struct_ncs_dom_lim.end_label_seq_id . _struct_ncs_dom_lim.end_label_alt_id . # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3M5K _struct.title ;Crystal structure of Putative NADH dehydrogenase/NAD(P)H nitroreductase (BDI_1728) from Parabacteroides distasonis ATCC 8503 at 1.86 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 3M5K # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details ;STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 6 ? ARG A 15 ? ASN A 28 ARG A 37 1 ? 10 HELX_P HELX_P2 2 GLU A 27 ? ALA A 40 ? GLU A 49 ALA A 62 1 ? 14 HELX_P HELX_P3 3 SER A 43 ? ARG A 47 ? SER A 65 ARG A 69 5 ? 5 HELX_P HELX_P4 4 ASP A 57 ? LEU A 68 ? ASP A 79 LEU A 90 1 ? 12 HELX_P HELX_P5 5 ALA A 71 ? THR A 77 ? ALA A 93 THR A 99 5 ? 7 HELX_P HELX_P6 6 ALA A 93 ? MSE A 112 ? ALA A 115 MSE A 134 1 ? 20 HELX_P HELX_P7 7 TYR A 124 ? ARG A 136 ? TYR A 146 ARG A 158 1 ? 13 HELX_P HELX_P8 8 ASN A 163 ? GLN A 165 ? ASN A 185 GLN A 187 5 ? 3 HELX_P HELX_P9 9 ASN B 6 ? ARG B 15 ? ASN B 28 ARG B 37 1 ? 10 HELX_P HELX_P10 10 GLU B 27 ? ALA B 40 ? GLU B 49 ALA B 62 1 ? 14 HELX_P HELX_P11 11 SER B 43 ? ARG B 47 ? SER B 65 ARG B 69 5 ? 5 HELX_P HELX_P12 12 ASP B 57 ? LEU B 68 ? ASP B 79 LEU B 90 1 ? 12 HELX_P HELX_P13 13 ALA B 71 ? THR B 77 ? ALA B 93 THR B 99 5 ? 7 HELX_P HELX_P14 14 ALA B 93 ? MSE B 112 ? ALA B 115 MSE B 134 1 ? 20 HELX_P HELX_P15 15 TYR B 124 ? ARG B 136 ? TYR B 146 ARG B 158 1 ? 13 HELX_P HELX_P16 16 ASN B 163 ? GLN B 165 ? ASN B 185 GLN B 187 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 38 C ? ? ? 1_555 A MSE 39 N A ? A GLY 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A GLY 38 C ? ? ? 1_555 A MSE 39 N B ? A GLY 60 A MSE 61 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? A MSE 39 C A ? ? 1_555 A ALA 40 N ? ? A MSE 61 A ALA 62 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale4 covale both ? A MSE 39 C B ? ? 1_555 A ALA 40 N ? ? A MSE 61 A ALA 62 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale5 covale both ? A THR 63 C ? ? ? 1_555 A MSE 64 N ? ? A THR 85 A MSE 86 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale both ? A MSE 64 C ? ? ? 1_555 A ALA 65 N ? ? A MSE 86 A ALA 87 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale7 covale both ? A ARG 72 C ? ? ? 1_555 A MSE 73 N A ? A ARG 94 A MSE 95 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale8 covale both ? A ARG 72 C ? ? ? 1_555 A MSE 73 N B ? A ARG 94 A MSE 95 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale9 covale both ? A MSE 73 C A ? ? 1_555 A LEU 74 N ? ? A MSE 95 A LEU 96 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale10 covale both ? A MSE 73 C B ? ? 1_555 A LEU 74 N ? ? A MSE 95 A LEU 96 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale11 covale both ? A SER 111 C ? ? ? 1_555 A MSE 112 N A ? A SER 133 A MSE 134 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? A SER 111 C ? ? ? 1_555 A MSE 112 N B ? A SER 133 A MSE 134 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? A MSE 112 C A ? ? 1_555 A GLY 113 N ? ? A MSE 134 A GLY 135 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale14 covale both ? A MSE 112 C B ? ? 1_555 A GLY 113 N ? ? A MSE 134 A GLY 135 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale15 covale both ? A ILE 141 C ? ? ? 1_555 A MSE 142 N A ? A ILE 163 A MSE 164 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale16 covale both ? A ILE 141 C ? ? ? 1_555 A MSE 142 N B ? A ILE 163 A MSE 164 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale17 covale both ? A MSE 142 C A ? ? 1_555 A PRO 143 N ? ? A MSE 164 A PRO 165 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale18 covale both ? A MSE 142 C B ? ? 1_555 A PRO 143 N ? ? A MSE 164 A PRO 165 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale19 covale both ? A PRO 152 C ? ? ? 1_555 A MSE 153 N A ? A PRO 174 A MSE 175 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale20 covale both ? A PRO 152 C ? ? ? 1_555 A MSE 153 N B ? A PRO 174 A MSE 175 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale21 covale both ? A MSE 153 C A ? ? 1_555 A GLN 154 N ? ? A MSE 175 A GLN 176 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale22 covale both ? A MSE 153 C B ? ? 1_555 A GLN 154 N ? ? A MSE 175 A GLN 176 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale23 covale both ? B GLY 38 C ? ? ? 1_555 B MSE 39 N A ? B GLY 60 B MSE 61 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale24 covale both ? B GLY 38 C ? ? ? 1_555 B MSE 39 N B ? B GLY 60 B MSE 61 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale25 covale both ? B MSE 39 C A ? ? 1_555 B ALA 40 N ? ? B MSE 61 B ALA 62 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale26 covale both ? B MSE 39 C B ? ? 1_555 B ALA 40 N ? ? B MSE 61 B ALA 62 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale27 covale both ? B THR 63 C ? ? ? 1_555 B MSE 64 N ? ? B THR 85 B MSE 86 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale28 covale both ? B MSE 64 C ? ? ? 1_555 B ALA 65 N ? ? B MSE 86 B ALA 87 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale29 covale both ? B ARG 72 C ? ? ? 1_555 B MSE 73 N A ? B ARG 94 B MSE 95 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale30 covale both ? B ARG 72 C ? ? ? 1_555 B MSE 73 N B ? B ARG 94 B MSE 95 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale31 covale both ? B MSE 73 C A ? ? 1_555 B LEU 74 N ? ? B MSE 95 B LEU 96 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale32 covale both ? B MSE 73 C B ? ? 1_555 B LEU 74 N ? ? B MSE 95 B LEU 96 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale33 covale both ? B SER 111 C ? ? ? 1_555 B MSE 112 N A ? B SER 133 B MSE 134 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale34 covale both ? B SER 111 C ? ? ? 1_555 B MSE 112 N B ? B SER 133 B MSE 134 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale35 covale both ? B MSE 112 C A ? ? 1_555 B GLY 113 N ? ? B MSE 134 B GLY 135 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale36 covale both ? B MSE 112 C B ? ? 1_555 B GLY 113 N ? ? B MSE 134 B GLY 135 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale37 covale both ? B ILE 141 C ? ? ? 1_555 B MSE 142 N A ? B ILE 163 B MSE 164 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale38 covale both ? B ILE 141 C ? ? ? 1_555 B MSE 142 N B ? B ILE 163 B MSE 164 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale39 covale both ? B MSE 142 C A ? ? 1_555 B PRO 143 N ? ? B MSE 164 B PRO 165 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale40 covale both ? B MSE 142 C B ? ? 1_555 B PRO 143 N ? ? B MSE 164 B PRO 165 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale41 covale both ? B PRO 152 C ? ? ? 1_555 B MSE 153 N A ? B PRO 174 B MSE 175 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale42 covale both ? B PRO 152 C ? ? ? 1_555 B MSE 153 N B ? B PRO 174 B MSE 175 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale43 covale both ? B MSE 153 C A ? ? 1_555 B GLN 154 N ? ? B MSE 175 B GLN 176 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale44 covale both ? B MSE 153 C B ? ? 1_555 B GLN 154 N ? ? B MSE 175 B GLN 176 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 122 A . ? TYR 144 A PRO 123 A ? PRO 145 A 1 4.59 2 TYR 122 B . ? TYR 144 B PRO 123 B ? PRO 145 B 1 1.65 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 5 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 115 ? ALA A 116 ? GLY A 137 ALA A 138 A 2 ILE A 141 ? GLY A 150 ? ILE A 163 GLY A 172 A 3 THR A 119 ? ALA A 120 ? THR A 141 ALA A 142 B 1 GLY A 115 ? ALA A 116 ? GLY A 137 ALA A 138 B 2 ILE A 141 ? GLY A 150 ? ILE A 163 GLY A 172 B 3 GLN A 79 ? ASP A 86 ? GLN A 101 ASP A 108 B 4 TRP A 50 ? VAL A 55 ? TRP A 72 VAL A 77 B 5 ILE B 167 ? HIS B 169 ? ILE B 189 HIS B 191 C 1 ILE A 167 ? HIS A 169 ? ILE A 189 HIS A 191 C 2 TRP B 50 ? VAL B 55 ? TRP B 72 VAL B 77 C 3 GLN B 79 ? ASP B 86 ? GLN B 101 ASP B 108 C 4 ILE B 141 ? GLY B 150 ? ILE B 163 GLY B 172 C 5 GLY B 115 ? ALA B 116 ? GLY B 137 ALA B 138 D 1 ILE A 167 ? HIS A 169 ? ILE A 189 HIS A 191 D 2 TRP B 50 ? VAL B 55 ? TRP B 72 VAL B 77 D 3 GLN B 79 ? ASP B 86 ? GLN B 101 ASP B 108 D 4 ILE B 141 ? GLY B 150 ? ILE B 163 GLY B 172 D 5 THR B 119 ? ALA B 120 ? THR B 141 ALA B 142 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 115 ? N GLY A 137 O GLY A 150 ? O GLY A 172 A 2 3 O VAL A 146 ? O VAL A 168 N THR A 119 ? N THR A 141 B 1 2 N GLY A 115 ? N GLY A 137 O GLY A 150 ? O GLY A 172 B 2 3 O MSE A 142 ? O MSE A 164 N GLY A 85 ? N GLY A 107 B 3 4 O ALA A 80 ? O ALA A 102 N VAL A 55 ? N VAL A 77 B 4 5 N ILE A 54 ? N ILE A 76 O HIS B 168 ? O HIS B 190 C 1 2 N HIS A 168 ? N HIS A 190 O ILE B 54 ? O ILE B 76 C 2 3 N VAL B 55 ? N VAL B 77 O ALA B 80 ? O ALA B 102 C 3 4 N VAL B 83 ? N VAL B 105 O LEU B 144 ? O LEU B 166 C 4 5 O GLY B 150 ? O GLY B 172 N GLY B 115 ? N GLY B 137 D 1 2 N HIS A 168 ? N HIS A 190 O ILE B 54 ? O ILE B 76 D 2 3 N VAL B 55 ? N VAL B 77 O ALA B 80 ? O ALA B 102 D 3 4 N VAL B 83 ? N VAL B 105 O LEU B 144 ? O LEU B 166 D 4 5 O VAL B 146 ? O VAL B 168 N THR B 119 ? N THR B 141 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMN 301 ? 20 'BINDING SITE FOR RESIDUE FMN A 301' AC2 Software B FMN 301 ? 22 'BINDING SITE FOR RESIDUE FMN B 301' AC3 Software B CL 303 ? 1 'BINDING SITE FOR RESIDUE CL B 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 ARG A 15 ? ARG A 37 . ? 1_555 ? 2 AC1 20 LYS A 16 ? LYS A 38 . ? 1_555 ? 3 AC1 20 SER A 17 ? SER A 39 . ? 1_555 ? 4 AC1 20 ARG A 19 ? ARG A 41 . ? 1_555 ? 5 AC1 20 PHE A 70 ? PHE A 92 . ? 1_555 ? 6 AC1 20 VAL A 117 ? VAL A 139 . ? 1_555 ? 7 AC1 20 TRP A 118 ? TRP A 140 . ? 1_555 ? 8 AC1 20 THR A 119 ? THR A 141 . ? 1_555 ? 9 AC1 20 ALA A 120 ? ALA A 142 . ? 1_555 ? 10 AC1 20 ARG A 127 ? ARG A 149 . ? 1_555 ? 11 AC1 20 LYS A 159 ? LYS A 181 . ? 1_555 ? 12 AC1 20 LYS A 161 ? LYS A 183 . ? 1_555 ? 13 AC1 20 HOH H . ? HOH A 312 . ? 1_555 ? 14 AC1 20 HOH H . ? HOH A 319 . ? 1_555 ? 15 AC1 20 HOH H . ? HOH A 327 . ? 1_555 ? 16 AC1 20 PRO B 42 ? PRO B 64 . ? 1_555 ? 17 AC1 20 SER B 43 ? SER B 65 . ? 1_555 ? 18 AC1 20 SER B 44 ? SER B 66 . ? 1_555 ? 19 AC1 20 ASP B 46 ? ASP B 68 . ? 1_555 ? 20 AC1 20 ASP B 97 ? ASP B 119 . ? 1_555 ? 21 AC2 22 PRO A 42 ? PRO A 64 . ? 1_555 ? 22 AC2 22 SER A 43 ? SER A 65 . ? 1_555 ? 23 AC2 22 SER A 44 ? SER A 66 . ? 1_555 ? 24 AC2 22 ASP A 46 ? ASP A 68 . ? 1_555 ? 25 AC2 22 ASP A 97 ? ASP A 119 . ? 1_555 ? 26 AC2 22 ARG B 15 ? ARG B 37 . ? 1_555 ? 27 AC2 22 LYS B 16 ? LYS B 38 . ? 1_555 ? 28 AC2 22 SER B 17 ? SER B 39 . ? 1_555 ? 29 AC2 22 ARG B 19 ? ARG B 41 . ? 1_555 ? 30 AC2 22 PHE B 70 ? PHE B 92 . ? 1_555 ? 31 AC2 22 MSE B 73 ? MSE B 95 . ? 1_555 ? 32 AC2 22 VAL B 117 ? VAL B 139 . ? 1_555 ? 33 AC2 22 TRP B 118 ? TRP B 140 . ? 1_555 ? 34 AC2 22 THR B 119 ? THR B 141 . ? 1_555 ? 35 AC2 22 ALA B 120 ? ALA B 142 . ? 1_555 ? 36 AC2 22 LYS B 159 ? LYS B 181 . ? 1_555 ? 37 AC2 22 LYS B 161 ? LYS B 183 . ? 1_555 ? 38 AC2 22 HOH I . ? HOH B 309 . ? 1_555 ? 39 AC2 22 HOH I . ? HOH B 333 . ? 1_555 ? 40 AC2 22 HOH I . ? HOH B 386 . ? 1_555 ? 41 AC2 22 HOH I . ? HOH B 406 . ? 1_555 ? 42 AC2 22 HOH I . ? HOH B 494 . ? 1_555 ? 43 AC3 1 LYS B 28 ? LYS B 50 . ? 1_555 ? # _atom_sites.entry_id 3M5K _atom_sites.fract_transf_matrix[1][1] 0.006683 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006683 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006683 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 GLN 2 24 ? ? ? A . n A 1 3 GLU 3 25 ? ? ? A . n A 1 4 PRO 4 26 ? ? ? A . n A 1 5 GLU 5 27 27 GLU GLU A . n A 1 6 ASN 6 28 28 ASN ASN A . n A 1 7 GLN 7 29 29 GLN GLN A . n A 1 8 THR 8 30 30 THR THR A . n A 1 9 LEU 9 31 31 LEU LEU A . n A 1 10 GLU 10 32 32 GLU GLU A . n A 1 11 THR 11 33 33 THR THR A . n A 1 12 ILE 12 34 34 ILE ILE A . n A 1 13 LEU 13 35 35 LEU LEU A . n A 1 14 ASN 14 36 36 ASN ASN A . n A 1 15 ARG 15 37 37 ARG ARG A . n A 1 16 LYS 16 38 38 LYS LYS A . n A 1 17 SER 17 39 39 SER SER A . n A 1 18 VAL 18 40 40 VAL VAL A . n A 1 19 ARG 19 41 41 ARG ARG A . n A 1 20 LYS 20 42 42 LYS LYS A . n A 1 21 TYR 21 43 43 TYR TYR A . n A 1 22 LYS 22 44 44 LYS LYS A . n A 1 23 ASP 23 45 45 ASP ASP A . n A 1 24 ARG 24 46 46 ARG ARG A . n A 1 25 PRO 25 47 47 PRO PRO A . n A 1 26 VAL 26 48 48 VAL VAL A . n A 1 27 GLU 27 49 49 GLU GLU A . n A 1 28 LYS 28 50 50 LYS LYS A . n A 1 29 GLU 29 51 51 GLU GLU A . n A 1 30 LYS 30 52 52 LYS LYS A . n A 1 31 ILE 31 53 53 ILE ILE A . n A 1 32 ASP 32 54 54 ASP ASP A . n A 1 33 LYS 33 55 55 LYS LYS A . n A 1 34 LEU 34 56 56 LEU LEU A . n A 1 35 ILE 35 57 57 ILE ILE A . n A 1 36 ARG 36 58 58 ARG ARG A . n A 1 37 ALA 37 59 59 ALA ALA A . n A 1 38 GLY 38 60 60 GLY GLY A . n A 1 39 MSE 39 61 61 MSE MSE A . n A 1 40 ALA 40 62 62 ALA ALA A . n A 1 41 ALA 41 63 63 ALA ALA A . n A 1 42 PRO 42 64 64 PRO PRO A . n A 1 43 SER 43 65 65 SER SER A . n A 1 44 SER 44 66 66 SER SER A . n A 1 45 ARG 45 67 67 ARG ARG A . n A 1 46 ASP 46 68 68 ASP ASP A . n A 1 47 ARG 47 69 69 ARG ARG A . n A 1 48 ARG 48 70 70 ARG ARG A . n A 1 49 PRO 49 71 71 PRO PRO A . n A 1 50 TRP 50 72 72 TRP TRP A . n A 1 51 GLU 51 73 73 GLU GLU A . n A 1 52 PHE 52 74 74 PHE PHE A . n A 1 53 ILE 53 75 75 ILE ILE A . n A 1 54 ILE 54 76 76 ILE ILE A . n A 1 55 VAL 55 77 77 VAL VAL A . n A 1 56 THR 56 78 78 THR THR A . n A 1 57 ASP 57 79 79 ASP ASP A . n A 1 58 ARG 58 80 80 ARG ARG A . n A 1 59 LYS 59 81 81 LYS LYS A . n A 1 60 ALA 60 82 82 ALA ALA A . n A 1 61 LEU 61 83 83 LEU LEU A . n A 1 62 ASP 62 84 84 ASP ASP A . n A 1 63 THR 63 85 85 THR THR A . n A 1 64 MSE 64 86 86 MSE MSE A . n A 1 65 ALA 65 87 87 ALA ALA A . n A 1 66 GLU 66 88 88 GLU GLU A . n A 1 67 GLY 67 89 89 GLY GLY A . n A 1 68 LEU 68 90 90 LEU LEU A . n A 1 69 PRO 69 91 91 PRO PRO A . n A 1 70 PHE 70 92 92 PHE PHE A . n A 1 71 ALA 71 93 93 ALA ALA A . n A 1 72 ARG 72 94 94 ARG ARG A . n A 1 73 MSE 73 95 95 MSE MSE A . n A 1 74 LEU 74 96 96 LEU LEU A . n A 1 75 LYS 75 97 97 LYS LYS A . n A 1 76 GLU 76 98 98 GLU GLU A . n A 1 77 THR 77 99 99 THR THR A . n A 1 78 ARG 78 100 100 ARG ARG A . n A 1 79 GLN 79 101 101 GLN GLN A . n A 1 80 ALA 80 102 102 ALA ALA A . n A 1 81 ILE 81 103 103 ILE ILE A . n A 1 82 VAL 82 104 104 VAL VAL A . n A 1 83 VAL 83 105 105 VAL VAL A . n A 1 84 CYS 84 106 106 CYS CYS A . n A 1 85 GLY 85 107 107 GLY GLY A . n A 1 86 ASP 86 108 108 ASP ASP A . n A 1 87 THR 87 109 109 THR THR A . n A 1 88 ILE 88 110 110 ILE ILE A . n A 1 89 LYS 89 111 111 LYS LYS A . n A 1 90 SER 90 112 112 SER SER A . n A 1 91 SER 91 113 113 SER SER A . n A 1 92 ASN 92 114 114 ASN ASN A . n A 1 93 ALA 93 115 115 ALA ALA A . n A 1 94 TRP 94 116 116 TRP TRP A . n A 1 95 PHE 95 117 117 PHE PHE A . n A 1 96 LEU 96 118 118 LEU LEU A . n A 1 97 ASP 97 119 119 ASP ASP A . n A 1 98 CYS 98 120 120 CYS CYS A . n A 1 99 SER 99 121 121 SER SER A . n A 1 100 ALA 100 122 122 ALA ALA A . n A 1 101 ALA 101 123 123 ALA ALA A . n A 1 102 SER 102 124 124 SER SER A . n A 1 103 GLN 103 125 125 GLN GLN A . n A 1 104 ASN 104 126 126 ASN ASN A . n A 1 105 LEU 105 127 127 LEU LEU A . n A 1 106 LEU 106 128 128 LEU LEU A . n A 1 107 LEU 107 129 129 LEU LEU A . n A 1 108 ALA 108 130 130 ALA ALA A . n A 1 109 ALA 109 131 131 ALA ALA A . n A 1 110 GLU 110 132 132 GLU GLU A . n A 1 111 SER 111 133 133 SER SER A . n A 1 112 MSE 112 134 134 MSE MSE A . n A 1 113 GLY 113 135 135 GLY GLY A . n A 1 114 LEU 114 136 136 LEU LEU A . n A 1 115 GLY 115 137 137 GLY GLY A . n A 1 116 ALA 116 138 138 ALA ALA A . n A 1 117 VAL 117 139 139 VAL VAL A . n A 1 118 TRP 118 140 140 TRP TRP A . n A 1 119 THR 119 141 141 THR THR A . n A 1 120 ALA 120 142 142 ALA ALA A . n A 1 121 VAL 121 143 143 VAL VAL A . n A 1 122 TYR 122 144 144 TYR TYR A . n A 1 123 PRO 123 145 145 PRO PRO A . n A 1 124 TYR 124 146 146 TYR TYR A . n A 1 125 PRO 125 147 147 PRO PRO A . n A 1 126 ASP 126 148 148 ASP ASP A . n A 1 127 ARG 127 149 149 ARG ARG A . n A 1 128 ILE 128 150 150 ILE ILE A . n A 1 129 GLU 129 151 151 GLU GLU A . n A 1 130 ILE 130 152 152 ILE ILE A . n A 1 131 VAL 131 153 153 VAL VAL A . n A 1 132 ARG 132 154 154 ARG ARG A . n A 1 133 LYS 133 155 155 LYS LYS A . n A 1 134 GLU 134 156 156 GLU GLU A . n A 1 135 LEU 135 157 157 LEU LEU A . n A 1 136 ARG 136 158 158 ARG ARG A . n A 1 137 LEU 137 159 159 LEU LEU A . n A 1 138 PRO 138 160 160 PRO PRO A . n A 1 139 ASP 139 161 161 ASP ASP A . n A 1 140 HIS 140 162 162 HIS HIS A . n A 1 141 ILE 141 163 163 ILE ILE A . n A 1 142 MSE 142 164 164 MSE MSE A . n A 1 143 PRO 143 165 165 PRO PRO A . n A 1 144 LEU 144 166 166 LEU LEU A . n A 1 145 ASN 145 167 167 ASN ASN A . n A 1 146 VAL 146 168 168 VAL VAL A . n A 1 147 ILE 147 169 169 ILE ILE A . n A 1 148 PRO 148 170 170 PRO PRO A . n A 1 149 VAL 149 171 171 VAL VAL A . n A 1 150 GLY 150 172 172 GLY GLY A . n A 1 151 TYR 151 173 173 TYR TYR A . n A 1 152 PRO 152 174 174 PRO PRO A . n A 1 153 MSE 153 175 175 MSE MSE A . n A 1 154 GLN 154 176 176 GLN GLN A . n A 1 155 LYS 155 177 177 LYS LYS A . n A 1 156 GLU 156 178 178 GLU GLU A . n A 1 157 THR 157 179 179 THR THR A . n A 1 158 PRO 158 180 180 PRO PRO A . n A 1 159 LYS 159 181 181 LYS LYS A . n A 1 160 ASN 160 182 182 ASN ASN A . n A 1 161 LYS 161 183 183 LYS LYS A . n A 1 162 TYR 162 184 184 TYR TYR A . n A 1 163 ASN 163 185 185 ASN ASN A . n A 1 164 VAL 164 186 186 VAL VAL A . n A 1 165 GLN 165 187 187 GLN GLN A . n A 1 166 GLN 166 188 188 GLN GLN A . n A 1 167 ILE 167 189 189 ILE ILE A . n A 1 168 HIS 168 190 190 HIS HIS A . n A 1 169 HIS 169 191 191 HIS HIS A . n A 1 170 ASN 170 192 192 ASN ASN A . n A 1 171 GLY 171 193 193 GLY GLY A . n A 1 172 TRP 172 194 194 TRP TRP A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 GLN 2 24 ? ? ? B . n B 1 3 GLU 3 25 ? ? ? B . n B 1 4 PRO 4 26 ? ? ? B . n B 1 5 GLU 5 27 27 GLU GLU B . n B 1 6 ASN 6 28 28 ASN ASN B . n B 1 7 GLN 7 29 29 GLN GLN B . n B 1 8 THR 8 30 30 THR THR B . n B 1 9 LEU 9 31 31 LEU LEU B . n B 1 10 GLU 10 32 32 GLU GLU B . n B 1 11 THR 11 33 33 THR THR B . n B 1 12 ILE 12 34 34 ILE ILE B . n B 1 13 LEU 13 35 35 LEU LEU B . n B 1 14 ASN 14 36 36 ASN ASN B . n B 1 15 ARG 15 37 37 ARG ARG B . n B 1 16 LYS 16 38 38 LYS LYS B . n B 1 17 SER 17 39 39 SER SER B . n B 1 18 VAL 18 40 40 VAL VAL B . n B 1 19 ARG 19 41 41 ARG ARG B . n B 1 20 LYS 20 42 42 LYS LYS B . n B 1 21 TYR 21 43 43 TYR TYR B . n B 1 22 LYS 22 44 44 LYS LYS B . n B 1 23 ASP 23 45 45 ASP ASP B . n B 1 24 ARG 24 46 46 ARG ARG B . n B 1 25 PRO 25 47 47 PRO PRO B . n B 1 26 VAL 26 48 48 VAL VAL B . n B 1 27 GLU 27 49 49 GLU GLU B . n B 1 28 LYS 28 50 50 LYS LYS B . n B 1 29 GLU 29 51 51 GLU GLU B . n B 1 30 LYS 30 52 52 LYS LYS B . n B 1 31 ILE 31 53 53 ILE ILE B . n B 1 32 ASP 32 54 54 ASP ASP B . n B 1 33 LYS 33 55 55 LYS LYS B . n B 1 34 LEU 34 56 56 LEU LEU B . n B 1 35 ILE 35 57 57 ILE ILE B . n B 1 36 ARG 36 58 58 ARG ARG B . n B 1 37 ALA 37 59 59 ALA ALA B . n B 1 38 GLY 38 60 60 GLY GLY B . n B 1 39 MSE 39 61 61 MSE MSE B . n B 1 40 ALA 40 62 62 ALA ALA B . n B 1 41 ALA 41 63 63 ALA ALA B . n B 1 42 PRO 42 64 64 PRO PRO B . n B 1 43 SER 43 65 65 SER SER B . n B 1 44 SER 44 66 66 SER SER B . n B 1 45 ARG 45 67 67 ARG ARG B . n B 1 46 ASP 46 68 68 ASP ASP B . n B 1 47 ARG 47 69 69 ARG ARG B . n B 1 48 ARG 48 70 70 ARG ARG B . n B 1 49 PRO 49 71 71 PRO PRO B . n B 1 50 TRP 50 72 72 TRP TRP B . n B 1 51 GLU 51 73 73 GLU GLU B . n B 1 52 PHE 52 74 74 PHE PHE B . n B 1 53 ILE 53 75 75 ILE ILE B . n B 1 54 ILE 54 76 76 ILE ILE B . n B 1 55 VAL 55 77 77 VAL VAL B . n B 1 56 THR 56 78 78 THR THR B . n B 1 57 ASP 57 79 79 ASP ASP B . n B 1 58 ARG 58 80 80 ARG ARG B . n B 1 59 LYS 59 81 81 LYS LYS B . n B 1 60 ALA 60 82 82 ALA ALA B . n B 1 61 LEU 61 83 83 LEU LEU B . n B 1 62 ASP 62 84 84 ASP ASP B . n B 1 63 THR 63 85 85 THR THR B . n B 1 64 MSE 64 86 86 MSE MSE B . n B 1 65 ALA 65 87 87 ALA ALA B . n B 1 66 GLU 66 88 88 GLU GLU B . n B 1 67 GLY 67 89 89 GLY GLY B . n B 1 68 LEU 68 90 90 LEU LEU B . n B 1 69 PRO 69 91 91 PRO PRO B . n B 1 70 PHE 70 92 92 PHE PHE B . n B 1 71 ALA 71 93 93 ALA ALA B . n B 1 72 ARG 72 94 94 ARG ARG B . n B 1 73 MSE 73 95 95 MSE MSE B . n B 1 74 LEU 74 96 96 LEU LEU B . n B 1 75 LYS 75 97 97 LYS LYS B . n B 1 76 GLU 76 98 98 GLU GLU B . n B 1 77 THR 77 99 99 THR THR B . n B 1 78 ARG 78 100 100 ARG ARG B . n B 1 79 GLN 79 101 101 GLN GLN B . n B 1 80 ALA 80 102 102 ALA ALA B . n B 1 81 ILE 81 103 103 ILE ILE B . n B 1 82 VAL 82 104 104 VAL VAL B . n B 1 83 VAL 83 105 105 VAL VAL B . n B 1 84 CYS 84 106 106 CYS CYS B . n B 1 85 GLY 85 107 107 GLY GLY B . n B 1 86 ASP 86 108 108 ASP ASP B . n B 1 87 THR 87 109 109 THR THR B . n B 1 88 ILE 88 110 110 ILE ILE B . n B 1 89 LYS 89 111 111 LYS LYS B . n B 1 90 SER 90 112 112 SER SER B . n B 1 91 SER 91 113 113 SER SER B . n B 1 92 ASN 92 114 114 ASN ASN B . n B 1 93 ALA 93 115 115 ALA ALA B . n B 1 94 TRP 94 116 116 TRP TRP B . n B 1 95 PHE 95 117 117 PHE PHE B . n B 1 96 LEU 96 118 118 LEU LEU B . n B 1 97 ASP 97 119 119 ASP ASP B . n B 1 98 CYS 98 120 120 CYS CYS B . n B 1 99 SER 99 121 121 SER SER B . n B 1 100 ALA 100 122 122 ALA ALA B . n B 1 101 ALA 101 123 123 ALA ALA B . n B 1 102 SER 102 124 124 SER SER B . n B 1 103 GLN 103 125 125 GLN GLN B . n B 1 104 ASN 104 126 126 ASN ASN B . n B 1 105 LEU 105 127 127 LEU LEU B . n B 1 106 LEU 106 128 128 LEU LEU B . n B 1 107 LEU 107 129 129 LEU LEU B . n B 1 108 ALA 108 130 130 ALA ALA B . n B 1 109 ALA 109 131 131 ALA ALA B . n B 1 110 GLU 110 132 132 GLU GLU B . n B 1 111 SER 111 133 133 SER SER B . n B 1 112 MSE 112 134 134 MSE MSE B . n B 1 113 GLY 113 135 135 GLY GLY B . n B 1 114 LEU 114 136 136 LEU LEU B . n B 1 115 GLY 115 137 137 GLY GLY B . n B 1 116 ALA 116 138 138 ALA ALA B . n B 1 117 VAL 117 139 139 VAL VAL B . n B 1 118 TRP 118 140 140 TRP TRP B . n B 1 119 THR 119 141 141 THR THR B . n B 1 120 ALA 120 142 142 ALA ALA B . n B 1 121 VAL 121 143 143 VAL VAL B . n B 1 122 TYR 122 144 144 TYR TYR B . n B 1 123 PRO 123 145 145 PRO PRO B . n B 1 124 TYR 124 146 146 TYR TYR B . n B 1 125 PRO 125 147 147 PRO PRO B . n B 1 126 ASP 126 148 148 ASP ASP B . n B 1 127 ARG 127 149 149 ARG ARG B . n B 1 128 ILE 128 150 150 ILE ILE B . n B 1 129 GLU 129 151 151 GLU GLU B . n B 1 130 ILE 130 152 152 ILE ILE B . n B 1 131 VAL 131 153 153 VAL VAL B . n B 1 132 ARG 132 154 154 ARG ARG B . n B 1 133 LYS 133 155 155 LYS LYS B . n B 1 134 GLU 134 156 156 GLU GLU B . n B 1 135 LEU 135 157 157 LEU LEU B . n B 1 136 ARG 136 158 158 ARG ARG B . n B 1 137 LEU 137 159 159 LEU LEU B . n B 1 138 PRO 138 160 160 PRO PRO B . n B 1 139 ASP 139 161 161 ASP ASP B . n B 1 140 HIS 140 162 162 HIS HIS B . n B 1 141 ILE 141 163 163 ILE ILE B . n B 1 142 MSE 142 164 164 MSE MSE B . n B 1 143 PRO 143 165 165 PRO PRO B . n B 1 144 LEU 144 166 166 LEU LEU B . n B 1 145 ASN 145 167 167 ASN ASN B . n B 1 146 VAL 146 168 168 VAL VAL B . n B 1 147 ILE 147 169 169 ILE ILE B . n B 1 148 PRO 148 170 170 PRO PRO B . n B 1 149 VAL 149 171 171 VAL VAL B . n B 1 150 GLY 150 172 172 GLY GLY B . n B 1 151 TYR 151 173 173 TYR TYR B . n B 1 152 PRO 152 174 174 PRO PRO B . n B 1 153 MSE 153 175 175 MSE MSE B . n B 1 154 GLN 154 176 176 GLN GLN B . n B 1 155 LYS 155 177 177 LYS LYS B . n B 1 156 GLU 156 178 178 GLU GLU B . n B 1 157 THR 157 179 179 THR THR B . n B 1 158 PRO 158 180 180 PRO PRO B . n B 1 159 LYS 159 181 181 LYS LYS B . n B 1 160 ASN 160 182 182 ASN ASN B . n B 1 161 LYS 161 183 183 LYS LYS B . n B 1 162 TYR 162 184 184 TYR TYR B . n B 1 163 ASN 163 185 185 ASN ASN B . n B 1 164 VAL 164 186 186 VAL VAL B . n B 1 165 GLN 165 187 187 GLN GLN B . n B 1 166 GLN 166 188 188 GLN GLN B . n B 1 167 ILE 167 189 189 ILE ILE B . n B 1 168 HIS 168 190 190 HIS HIS B . n B 1 169 HIS 169 191 191 HIS HIS B . n B 1 170 ASN 170 192 192 ASN ASN B . n B 1 171 GLY 171 193 193 GLY GLY B . n B 1 172 TRP 172 194 194 TRP TRP B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN 1 301 301 FMN FMN A . D 3 UNL 1 302 302 UNL UNL A . E 2 FMN 1 301 301 FMN FMN B . F 3 UNL 1 302 302 UNL UNL B . G 4 CL 1 303 303 CL CL B . H 5 HOH 1 303 303 HOH HOH A . H 5 HOH 2 304 304 HOH HOH A . H 5 HOH 3 305 305 HOH HOH A . H 5 HOH 4 306 306 HOH HOH A . H 5 HOH 5 307 307 HOH HOH A . H 5 HOH 6 308 308 HOH HOH A . H 5 HOH 7 309 309 HOH HOH A . H 5 HOH 8 310 310 HOH HOH A . H 5 HOH 9 311 311 HOH HOH A . H 5 HOH 10 312 312 HOH HOH A . H 5 HOH 11 313 313 HOH HOH A . H 5 HOH 12 314 314 HOH HOH A . H 5 HOH 13 315 315 HOH HOH A . H 5 HOH 14 316 316 HOH HOH A . H 5 HOH 15 317 317 HOH HOH A . H 5 HOH 16 318 318 HOH HOH A . H 5 HOH 17 319 319 HOH HOH A . H 5 HOH 18 320 320 HOH HOH A . H 5 HOH 19 321 321 HOH HOH A . H 5 HOH 20 322 322 HOH HOH A . H 5 HOH 21 323 323 HOH HOH A . H 5 HOH 22 324 324 HOH HOH A . H 5 HOH 23 325 325 HOH HOH A . H 5 HOH 24 326 326 HOH HOH A . H 5 HOH 25 327 327 HOH HOH A . H 5 HOH 26 328 328 HOH HOH A . H 5 HOH 27 329 329 HOH HOH A . H 5 HOH 28 330 330 HOH HOH A . H 5 HOH 29 331 331 HOH HOH A . H 5 HOH 30 332 332 HOH HOH A . H 5 HOH 31 333 333 HOH HOH A . H 5 HOH 32 334 334 HOH HOH A . H 5 HOH 33 335 335 HOH HOH A . H 5 HOH 34 336 336 HOH HOH A . H 5 HOH 35 337 337 HOH HOH A . H 5 HOH 36 338 338 HOH HOH A . H 5 HOH 37 339 339 HOH HOH A . H 5 HOH 38 340 340 HOH HOH A . H 5 HOH 39 341 341 HOH HOH A . H 5 HOH 40 342 342 HOH HOH A . H 5 HOH 41 343 343 HOH HOH A . H 5 HOH 42 344 344 HOH HOH A . H 5 HOH 43 345 345 HOH HOH A . H 5 HOH 44 346 346 HOH HOH A . H 5 HOH 45 347 347 HOH HOH A . H 5 HOH 46 348 348 HOH HOH A . H 5 HOH 47 349 349 HOH HOH A . H 5 HOH 48 350 350 HOH HOH A . H 5 HOH 49 351 351 HOH HOH A . H 5 HOH 50 352 352 HOH HOH A . H 5 HOH 51 353 353 HOH HOH A . H 5 HOH 52 354 354 HOH HOH A . H 5 HOH 53 355 355 HOH HOH A . H 5 HOH 54 356 356 HOH HOH A . H 5 HOH 55 357 357 HOH HOH A . H 5 HOH 56 358 358 HOH HOH A . H 5 HOH 57 359 359 HOH HOH A . H 5 HOH 58 360 360 HOH HOH A . H 5 HOH 59 361 361 HOH HOH A . H 5 HOH 60 362 362 HOH HOH A . H 5 HOH 61 363 363 HOH HOH A . H 5 HOH 62 364 364 HOH HOH A . H 5 HOH 63 365 365 HOH HOH A . H 5 HOH 64 366 366 HOH HOH A . H 5 HOH 65 367 367 HOH HOH A . H 5 HOH 66 368 368 HOH HOH A . H 5 HOH 67 369 369 HOH HOH A . H 5 HOH 68 370 370 HOH HOH A . H 5 HOH 69 371 371 HOH HOH A . H 5 HOH 70 372 372 HOH HOH A . H 5 HOH 71 373 373 HOH HOH A . H 5 HOH 72 374 374 HOH HOH A . H 5 HOH 73 375 375 HOH HOH A . H 5 HOH 74 376 376 HOH HOH A . H 5 HOH 75 377 377 HOH HOH A . H 5 HOH 76 378 378 HOH HOH A . H 5 HOH 77 379 379 HOH HOH A . H 5 HOH 78 380 380 HOH HOH A . H 5 HOH 79 381 381 HOH HOH A . H 5 HOH 80 382 382 HOH HOH A . H 5 HOH 81 383 383 HOH HOH A . H 5 HOH 82 384 384 HOH HOH A . H 5 HOH 83 385 385 HOH HOH A . H 5 HOH 84 386 386 HOH HOH A . H 5 HOH 85 387 387 HOH HOH A . H 5 HOH 86 388 388 HOH HOH A . H 5 HOH 87 389 389 HOH HOH A . H 5 HOH 88 390 390 HOH HOH A . H 5 HOH 89 391 391 HOH HOH A . H 5 HOH 90 392 392 HOH HOH A . H 5 HOH 91 393 393 HOH HOH A . H 5 HOH 92 394 394 HOH HOH A . H 5 HOH 93 395 395 HOH HOH A . H 5 HOH 94 396 396 HOH HOH A . H 5 HOH 95 397 397 HOH HOH A . H 5 HOH 96 398 398 HOH HOH A . H 5 HOH 97 399 399 HOH HOH A . H 5 HOH 98 400 400 HOH HOH A . H 5 HOH 99 401 401 HOH HOH A . H 5 HOH 100 402 402 HOH HOH A . H 5 HOH 101 403 403 HOH HOH A . H 5 HOH 102 404 404 HOH HOH A . H 5 HOH 103 405 405 HOH HOH A . H 5 HOH 104 406 406 HOH HOH A . H 5 HOH 105 407 407 HOH HOH A . H 5 HOH 106 408 408 HOH HOH A . H 5 HOH 107 409 409 HOH HOH A . H 5 HOH 108 410 410 HOH HOH A . H 5 HOH 109 411 411 HOH HOH A . H 5 HOH 110 412 412 HOH HOH A . H 5 HOH 111 413 413 HOH HOH A . H 5 HOH 112 414 414 HOH HOH A . H 5 HOH 113 415 415 HOH HOH A . H 5 HOH 114 416 416 HOH HOH A . H 5 HOH 115 417 417 HOH HOH A . H 5 HOH 116 418 418 HOH HOH A . H 5 HOH 117 419 419 HOH HOH A . H 5 HOH 118 420 420 HOH HOH A . H 5 HOH 119 421 421 HOH HOH A . H 5 HOH 120 422 422 HOH HOH A . H 5 HOH 121 423 423 HOH HOH A . H 5 HOH 122 424 424 HOH HOH A . H 5 HOH 123 425 425 HOH HOH A . H 5 HOH 124 426 426 HOH HOH A . H 5 HOH 125 427 427 HOH HOH A . H 5 HOH 126 428 428 HOH HOH A . H 5 HOH 127 429 429 HOH HOH A . H 5 HOH 128 430 430 HOH HOH A . H 5 HOH 129 431 431 HOH HOH A . H 5 HOH 130 432 432 HOH HOH A . H 5 HOH 131 433 433 HOH HOH A . H 5 HOH 132 434 434 HOH HOH A . H 5 HOH 133 435 435 HOH HOH A . H 5 HOH 134 436 436 HOH HOH A . H 5 HOH 135 437 437 HOH HOH A . H 5 HOH 136 438 438 HOH HOH A . H 5 HOH 137 439 439 HOH HOH A . H 5 HOH 138 440 440 HOH HOH A . H 5 HOH 139 441 441 HOH HOH A . H 5 HOH 140 442 442 HOH HOH A . H 5 HOH 141 443 443 HOH HOH A . H 5 HOH 142 444 444 HOH HOH A . H 5 HOH 143 445 445 HOH HOH A . H 5 HOH 144 446 446 HOH HOH A . H 5 HOH 145 447 447 HOH HOH A . H 5 HOH 146 448 448 HOH HOH A . H 5 HOH 147 449 449 HOH HOH A . H 5 HOH 148 450 450 HOH HOH A . H 5 HOH 149 451 451 HOH HOH A . H 5 HOH 150 452 452 HOH HOH A . H 5 HOH 151 453 453 HOH HOH A . H 5 HOH 152 454 454 HOH HOH A . H 5 HOH 153 455 455 HOH HOH A . H 5 HOH 154 456 456 HOH HOH A . H 5 HOH 155 457 457 HOH HOH A . H 5 HOH 156 458 458 HOH HOH A . H 5 HOH 157 459 459 HOH HOH A . H 5 HOH 158 460 460 HOH HOH A . H 5 HOH 159 461 461 HOH HOH A . H 5 HOH 160 462 462 HOH HOH A . H 5 HOH 161 463 463 HOH HOH A . H 5 HOH 162 464 464 HOH HOH A . H 5 HOH 163 465 465 HOH HOH A . H 5 HOH 164 466 466 HOH HOH A . H 5 HOH 165 467 467 HOH HOH A . I 5 HOH 1 304 304 HOH HOH B . I 5 HOH 2 305 305 HOH HOH B . I 5 HOH 3 306 306 HOH HOH B . I 5 HOH 4 307 307 HOH HOH B . I 5 HOH 5 308 308 HOH HOH B . I 5 HOH 6 309 309 HOH HOH B . I 5 HOH 7 310 310 HOH HOH B . I 5 HOH 8 311 311 HOH HOH B . I 5 HOH 9 312 312 HOH HOH B . I 5 HOH 10 313 313 HOH HOH B . I 5 HOH 11 314 314 HOH HOH B . I 5 HOH 12 315 315 HOH HOH B . I 5 HOH 13 316 316 HOH HOH B . I 5 HOH 14 317 317 HOH HOH B . I 5 HOH 15 318 318 HOH HOH B . I 5 HOH 16 319 319 HOH HOH B . I 5 HOH 17 320 320 HOH HOH B . I 5 HOH 18 321 321 HOH HOH B . I 5 HOH 19 322 322 HOH HOH B . I 5 HOH 20 323 323 HOH HOH B . I 5 HOH 21 324 324 HOH HOH B . I 5 HOH 22 325 325 HOH HOH B . I 5 HOH 23 326 326 HOH HOH B . I 5 HOH 24 327 327 HOH HOH B . I 5 HOH 25 328 328 HOH HOH B . I 5 HOH 26 329 329 HOH HOH B . I 5 HOH 27 330 330 HOH HOH B . I 5 HOH 28 331 331 HOH HOH B . I 5 HOH 29 332 332 HOH HOH B . I 5 HOH 30 333 333 HOH HOH B . I 5 HOH 31 334 334 HOH HOH B . I 5 HOH 32 335 335 HOH HOH B . I 5 HOH 33 336 336 HOH HOH B . I 5 HOH 34 337 337 HOH HOH B . I 5 HOH 35 338 338 HOH HOH B . I 5 HOH 36 339 339 HOH HOH B . I 5 HOH 37 340 340 HOH HOH B . I 5 HOH 38 341 341 HOH HOH B . I 5 HOH 39 342 342 HOH HOH B . I 5 HOH 40 343 343 HOH HOH B . I 5 HOH 41 344 344 HOH HOH B . I 5 HOH 42 345 345 HOH HOH B . I 5 HOH 43 346 346 HOH HOH B . I 5 HOH 44 347 347 HOH HOH B . I 5 HOH 45 348 348 HOH HOH B . I 5 HOH 46 349 349 HOH HOH B . I 5 HOH 47 350 350 HOH HOH B . I 5 HOH 48 351 351 HOH HOH B . I 5 HOH 49 352 352 HOH HOH B . I 5 HOH 50 353 353 HOH HOH B . I 5 HOH 51 354 354 HOH HOH B . I 5 HOH 52 355 355 HOH HOH B . I 5 HOH 53 356 356 HOH HOH B . I 5 HOH 54 357 357 HOH HOH B . I 5 HOH 55 358 358 HOH HOH B . I 5 HOH 56 359 359 HOH HOH B . I 5 HOH 57 360 360 HOH HOH B . I 5 HOH 58 361 361 HOH HOH B . I 5 HOH 59 362 362 HOH HOH B . I 5 HOH 60 363 363 HOH HOH B . I 5 HOH 61 364 364 HOH HOH B . I 5 HOH 62 365 365 HOH HOH B . I 5 HOH 63 366 366 HOH HOH B . I 5 HOH 64 367 367 HOH HOH B . I 5 HOH 65 368 368 HOH HOH B . I 5 HOH 66 369 369 HOH HOH B . I 5 HOH 67 370 370 HOH HOH B . I 5 HOH 68 371 371 HOH HOH B . I 5 HOH 69 372 372 HOH HOH B . I 5 HOH 70 373 373 HOH HOH B . I 5 HOH 71 374 374 HOH HOH B . I 5 HOH 72 375 375 HOH HOH B . I 5 HOH 73 376 376 HOH HOH B . I 5 HOH 74 377 377 HOH HOH B . I 5 HOH 75 378 378 HOH HOH B . I 5 HOH 76 379 379 HOH HOH B . I 5 HOH 77 380 380 HOH HOH B . I 5 HOH 78 381 381 HOH HOH B . I 5 HOH 79 382 382 HOH HOH B . I 5 HOH 80 383 383 HOH HOH B . I 5 HOH 81 384 384 HOH HOH B . I 5 HOH 82 385 385 HOH HOH B . I 5 HOH 83 386 386 HOH HOH B . I 5 HOH 84 387 387 HOH HOH B . I 5 HOH 85 388 388 HOH HOH B . I 5 HOH 86 389 389 HOH HOH B . I 5 HOH 87 390 390 HOH HOH B . I 5 HOH 88 391 391 HOH HOH B . I 5 HOH 89 392 392 HOH HOH B . I 5 HOH 90 393 393 HOH HOH B . I 5 HOH 91 394 394 HOH HOH B . I 5 HOH 92 395 395 HOH HOH B . I 5 HOH 93 396 396 HOH HOH B . I 5 HOH 94 397 397 HOH HOH B . I 5 HOH 95 398 398 HOH HOH B . I 5 HOH 96 399 399 HOH HOH B . I 5 HOH 97 400 400 HOH HOH B . I 5 HOH 98 401 401 HOH HOH B . I 5 HOH 99 402 402 HOH HOH B . I 5 HOH 100 403 403 HOH HOH B . I 5 HOH 101 404 404 HOH HOH B . I 5 HOH 102 405 405 HOH HOH B . I 5 HOH 103 406 406 HOH HOH B . I 5 HOH 104 407 407 HOH HOH B . I 5 HOH 105 408 408 HOH HOH B . I 5 HOH 106 409 409 HOH HOH B . I 5 HOH 107 410 410 HOH HOH B . I 5 HOH 108 411 411 HOH HOH B . I 5 HOH 109 412 412 HOH HOH B . I 5 HOH 110 413 413 HOH HOH B . I 5 HOH 111 414 414 HOH HOH B . I 5 HOH 112 415 415 HOH HOH B . I 5 HOH 113 416 416 HOH HOH B . I 5 HOH 114 417 417 HOH HOH B . I 5 HOH 115 418 418 HOH HOH B . I 5 HOH 116 419 419 HOH HOH B . I 5 HOH 117 420 420 HOH HOH B . I 5 HOH 118 421 421 HOH HOH B . I 5 HOH 119 422 422 HOH HOH B . I 5 HOH 120 423 423 HOH HOH B . I 5 HOH 121 424 424 HOH HOH B . I 5 HOH 122 425 425 HOH HOH B . I 5 HOH 123 426 426 HOH HOH B . I 5 HOH 124 427 427 HOH HOH B . I 5 HOH 125 428 428 HOH HOH B . I 5 HOH 126 429 429 HOH HOH B . I 5 HOH 127 430 430 HOH HOH B . I 5 HOH 128 431 431 HOH HOH B . I 5 HOH 129 432 432 HOH HOH B . I 5 HOH 130 433 433 HOH HOH B . I 5 HOH 131 434 434 HOH HOH B . I 5 HOH 132 435 435 HOH HOH B . I 5 HOH 133 436 436 HOH HOH B . I 5 HOH 134 437 437 HOH HOH B . I 5 HOH 135 438 438 HOH HOH B . I 5 HOH 136 439 439 HOH HOH B . I 5 HOH 137 440 440 HOH HOH B . I 5 HOH 138 441 441 HOH HOH B . I 5 HOH 139 442 442 HOH HOH B . I 5 HOH 140 443 443 HOH HOH B . I 5 HOH 141 444 444 HOH HOH B . I 5 HOH 142 445 445 HOH HOH B . I 5 HOH 143 446 446 HOH HOH B . I 5 HOH 144 447 447 HOH HOH B . I 5 HOH 145 448 448 HOH HOH B . I 5 HOH 146 449 449 HOH HOH B . I 5 HOH 147 450 450 HOH HOH B . I 5 HOH 148 451 451 HOH HOH B . I 5 HOH 149 452 452 HOH HOH B . I 5 HOH 150 453 453 HOH HOH B . I 5 HOH 151 454 454 HOH HOH B . I 5 HOH 152 455 455 HOH HOH B . I 5 HOH 153 456 456 HOH HOH B . I 5 HOH 154 457 457 HOH HOH B . I 5 HOH 155 458 458 HOH HOH B . I 5 HOH 156 459 459 HOH HOH B . I 5 HOH 157 460 460 HOH HOH B . I 5 HOH 158 461 461 HOH HOH B . I 5 HOH 159 462 462 HOH HOH B . I 5 HOH 160 463 463 HOH HOH B . I 5 HOH 161 464 464 HOH HOH B . I 5 HOH 162 465 465 HOH HOH B . I 5 HOH 163 466 466 HOH HOH B . I 5 HOH 164 467 467 HOH HOH B . I 5 HOH 165 468 468 HOH HOH B . I 5 HOH 166 469 469 HOH HOH B . I 5 HOH 167 470 470 HOH HOH B . I 5 HOH 168 471 471 HOH HOH B . I 5 HOH 169 472 472 HOH HOH B . I 5 HOH 170 473 473 HOH HOH B . I 5 HOH 171 474 474 HOH HOH B . I 5 HOH 172 475 475 HOH HOH B . I 5 HOH 173 476 476 HOH HOH B . I 5 HOH 174 477 477 HOH HOH B . I 5 HOH 175 478 478 HOH HOH B . I 5 HOH 176 479 479 HOH HOH B . I 5 HOH 177 480 480 HOH HOH B . I 5 HOH 178 481 481 HOH HOH B . I 5 HOH 179 482 482 HOH HOH B . I 5 HOH 180 483 483 HOH HOH B . I 5 HOH 181 484 484 HOH HOH B . I 5 HOH 182 485 485 HOH HOH B . I 5 HOH 183 486 486 HOH HOH B . I 5 HOH 184 487 487 HOH HOH B . I 5 HOH 185 488 488 HOH HOH B . I 5 HOH 186 489 489 HOH HOH B . I 5 HOH 187 490 490 HOH HOH B . I 5 HOH 188 491 491 HOH HOH B . I 5 HOH 189 492 492 HOH HOH B . I 5 HOH 190 493 493 HOH HOH B . I 5 HOH 191 494 494 HOH HOH B . I 5 HOH 192 495 495 HOH HOH B . I 5 HOH 193 496 496 HOH HOH B . I 5 HOH 194 497 497 HOH HOH B . I 5 HOH 195 498 498 HOH HOH B . I 5 HOH 196 499 499 HOH HOH B . I 5 HOH 197 500 500 HOH HOH B . I 5 HOH 198 501 501 HOH HOH B . I 5 HOH 199 502 502 HOH HOH B . I 5 HOH 200 503 503 HOH HOH B . I 5 HOH 201 504 504 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 39 A MSE 61 ? MET SELENOMETHIONINE 2 A MSE 64 A MSE 86 ? MET SELENOMETHIONINE 3 A MSE 73 A MSE 95 ? MET SELENOMETHIONINE 4 A MSE 112 A MSE 134 ? MET SELENOMETHIONINE 5 A MSE 142 A MSE 164 ? MET SELENOMETHIONINE 6 A MSE 153 A MSE 175 ? MET SELENOMETHIONINE 7 B MSE 39 B MSE 61 ? MET SELENOMETHIONINE 8 B MSE 64 B MSE 86 ? MET SELENOMETHIONINE 9 B MSE 73 B MSE 95 ? MET SELENOMETHIONINE 10 B MSE 112 B MSE 134 ? MET SELENOMETHIONINE 11 B MSE 142 B MSE 164 ? MET SELENOMETHIONINE 12 B MSE 153 B MSE 175 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9090 ? 1 MORE -48 ? 1 'SSA (A^2)' 12950 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 386 ? H HOH . 2 1 B HOH 411 ? I HOH . 3 1 B HOH 455 ? I HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3M5K _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT (RESIDUES 24-194) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 91 ? ? -39.72 -38.79 2 1 SER A 112 ? ? -151.17 80.45 3 1 ALA A 115 ? ? -141.81 -5.77 4 1 VAL A 143 ? ? -117.36 -79.64 5 1 VAL B 143 ? ? -125.14 -69.57 6 1 PRO B 145 ? ? -101.73 41.34 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 42 ? CE ? A LYS 20 CE 2 1 Y 1 A LYS 42 ? NZ ? A LYS 20 NZ 3 1 Y 1 A LYS 50 ? CD ? A LYS 28 CD 4 1 Y 1 A LYS 50 ? CE ? A LYS 28 CE 5 1 Y 1 A LYS 50 ? NZ ? A LYS 28 NZ 6 1 Y 1 A GLU 51 ? CG ? A GLU 29 CG 7 1 Y 1 A GLU 51 ? CD ? A GLU 29 CD 8 1 Y 1 A GLU 51 ? OE1 ? A GLU 29 OE1 9 1 Y 1 A GLU 51 ? OE2 ? A GLU 29 OE2 10 1 Y 1 A ARG 67 ? CZ ? A ARG 45 CZ 11 1 Y 1 A ARG 67 ? NH1 ? A ARG 45 NH1 12 1 Y 1 A ARG 67 ? NH2 ? A ARG 45 NH2 13 1 Y 1 A LYS 155 ? CE ? A LYS 133 CE 14 1 Y 1 A LYS 155 ? NZ ? A LYS 133 NZ 15 1 Y 1 A LYS 177 ? CG ? A LYS 155 CG 16 1 Y 1 A LYS 177 ? CD ? A LYS 155 CD 17 1 Y 1 A LYS 177 ? CE ? A LYS 155 CE 18 1 Y 1 A LYS 177 ? NZ ? A LYS 155 NZ 19 1 Y 1 B LYS 42 ? CE ? B LYS 20 CE 20 1 Y 1 B LYS 42 ? NZ ? B LYS 20 NZ 21 1 Y 1 B GLU 51 ? CD ? B GLU 29 CD 22 1 Y 1 B GLU 51 ? OE1 ? B GLU 29 OE1 23 1 Y 1 B GLU 51 ? OE2 ? B GLU 29 OE2 24 1 Y 1 B ARG 94 ? CZ ? B ARG 72 CZ 25 1 Y 1 B ARG 94 ? NH1 ? B ARG 72 NH1 26 1 Y 1 B ARG 94 ? NH2 ? B ARG 72 NH2 27 1 Y 1 B LYS 177 ? CG ? B LYS 155 CG 28 1 Y 1 B LYS 177 ? CD ? B LYS 155 CD 29 1 Y 1 B LYS 177 ? CE ? B LYS 155 CE 30 1 Y 1 B LYS 177 ? NZ ? B LYS 155 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLN 24 ? A GLN 2 3 1 Y 1 A GLU 25 ? A GLU 3 4 1 Y 1 A PRO 26 ? A PRO 4 5 1 Y 1 B GLY 0 ? B GLY 1 6 1 Y 1 B GLN 24 ? B GLN 2 7 1 Y 1 B GLU 25 ? B GLU 3 8 1 Y 1 B PRO 26 ? B PRO 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FLAVIN MONONUCLEOTIDE' FMN 3 'UNKNOWN LIGAND' UNL 4 'CHLORIDE ION' CL 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #