data_3M6Q # _entry.id 3M6Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3M6Q pdb_00003m6q 10.2210/pdb3m6q/pdb RCSB RCSB058177 ? ? WWPDB D_1000058177 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3M6O AtPDF1B unspecified PDB 3M6P 'AtPDF1B in complex with actinonin' unspecified PDB 3M6R 'AtPDF1B G41M mutant in complex with actinonin' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3M6Q _pdbx_database_status.recvd_initial_deposition_date 2010-03-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fieulaine, S.' 1 'Meinnel, T.' 2 'Giglione, C.' 3 # _citation.id primary _citation.title 'Trapping conformational states along ligand-binding dynamics of peptide deformylase: the impact of induced fit on enzyme catalysis' _citation.journal_abbrev 'Plos Biol.' _citation.journal_volume 9 _citation.page_first e1001066 _citation.page_last e1001066 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1544-9173 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21629676 _citation.pdbx_database_id_DOI 10.1371/journal.pbio.1001066 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fieulaine, S.' 1 ? primary 'Boularot, A.' 2 ? primary 'Artaud, I.' 3 ? primary 'Desmadril, M.' 4 ? primary 'Dardel, F.' 5 ? primary 'Meinnel, T.' 6 ? primary 'Giglione, C.' 7 ? # _cell.entry_id 3M6Q _cell.length_a 56.63 _cell.length_b 56.63 _cell.length_c 146.55 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3M6Q _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptide deformylase 1B' 22047.311 1 3.5.1.88 G41Q 'residues 1-193' ? 2 non-polymer syn ACTINONIN 385.498 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 5 ? ? ? ? 4 water nat water 18.015 148 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PDF 1B, AtPDF1B, AtDEF2, Polypeptide deformylase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDQIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKY SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR ; _entity_poly.pdbx_seq_one_letter_code_can ;MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDQIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKY SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ILE n 1 4 VAL n 1 5 GLU n 1 6 TYR n 1 7 PRO n 1 8 ASP n 1 9 PRO n 1 10 ILE n 1 11 LEU n 1 12 ARG n 1 13 ALA n 1 14 LYS n 1 15 ASN n 1 16 LYS n 1 17 ARG n 1 18 ILE n 1 19 ASP n 1 20 ILE n 1 21 PHE n 1 22 ASP n 1 23 GLU n 1 24 ASN n 1 25 LEU n 1 26 LYS n 1 27 ASN n 1 28 LEU n 1 29 VAL n 1 30 ASP n 1 31 ALA n 1 32 MET n 1 33 PHE n 1 34 ASP n 1 35 VAL n 1 36 MET n 1 37 TYR n 1 38 LYS n 1 39 THR n 1 40 ASP n 1 41 GLN n 1 42 ILE n 1 43 GLY n 1 44 LEU n 1 45 SER n 1 46 ALA n 1 47 PRO n 1 48 GLN n 1 49 VAL n 1 50 GLY n 1 51 LEU n 1 52 ASN n 1 53 VAL n 1 54 GLN n 1 55 LEU n 1 56 MET n 1 57 VAL n 1 58 PHE n 1 59 ASN n 1 60 PRO n 1 61 ALA n 1 62 GLY n 1 63 GLU n 1 64 PRO n 1 65 GLY n 1 66 GLU n 1 67 GLY n 1 68 LYS n 1 69 GLU n 1 70 ILE n 1 71 VAL n 1 72 LEU n 1 73 VAL n 1 74 ASN n 1 75 PRO n 1 76 LYS n 1 77 ILE n 1 78 LYS n 1 79 LYS n 1 80 TYR n 1 81 SER n 1 82 ASP n 1 83 LYS n 1 84 LEU n 1 85 VAL n 1 86 PRO n 1 87 PHE n 1 88 ASP n 1 89 GLU n 1 90 GLY n 1 91 CYS n 1 92 LEU n 1 93 SER n 1 94 PHE n 1 95 PRO n 1 96 GLY n 1 97 ILE n 1 98 TYR n 1 99 ALA n 1 100 GLU n 1 101 VAL n 1 102 VAL n 1 103 ARG n 1 104 PRO n 1 105 GLN n 1 106 SER n 1 107 VAL n 1 108 LYS n 1 109 ILE n 1 110 ASP n 1 111 ALA n 1 112 ARG n 1 113 ASP n 1 114 ILE n 1 115 THR n 1 116 GLY n 1 117 GLU n 1 118 ARG n 1 119 PHE n 1 120 SER n 1 121 ILE n 1 122 SER n 1 123 LEU n 1 124 SER n 1 125 ARG n 1 126 LEU n 1 127 PRO n 1 128 ALA n 1 129 ARG n 1 130 ILE n 1 131 PHE n 1 132 GLN n 1 133 HIS n 1 134 GLU n 1 135 TYR n 1 136 ASP n 1 137 HIS n 1 138 LEU n 1 139 GLU n 1 140 GLY n 1 141 VAL n 1 142 LEU n 1 143 PHE n 1 144 PHE n 1 145 ASP n 1 146 ARG n 1 147 MET n 1 148 THR n 1 149 ASP n 1 150 GLN n 1 151 VAL n 1 152 LEU n 1 153 ASP n 1 154 SER n 1 155 ILE n 1 156 ARG n 1 157 GLU n 1 158 GLU n 1 159 LEU n 1 160 GLU n 1 161 ALA n 1 162 LEU n 1 163 GLU n 1 164 LYS n 1 165 LYS n 1 166 TYR n 1 167 GLU n 1 168 GLU n 1 169 LYS n 1 170 THR n 1 171 GLY n 1 172 LEU n 1 173 PRO n 1 174 SER n 1 175 PRO n 1 176 GLU n 1 177 ARG n 1 178 VAL n 1 179 GLU n 1 180 ALA n 1 181 ARG n 1 182 GLN n 1 183 LYS n 1 184 ARG n 1 185 LYS n 1 186 ALA n 1 187 GLY n 1 188 VAL n 1 189 GLY n 1 190 PHE n 1 191 GLY n 1 192 LYS n 1 193 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name thale-cress _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene def _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Jm101Tr _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE60 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DEF1B_ARATH _struct_ref.pdbx_db_accession Q9FUZ2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSD KLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEAL EKKYEEKTGLPSPERVEARQKRKAGVGFGKR ; _struct_ref.pdbx_align_begin 83 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3M6Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 193 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9FUZ2 _struct_ref_seq.db_align_beg 83 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 273 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 193 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3M6Q MET A 1 ? UNP Q9FUZ2 ? ? 'cloning artifact' 1 1 1 3M6Q GLU A 2 ? UNP Q9FUZ2 ? ? 'cloning artifact' 2 2 1 3M6Q GLN A 41 ? UNP Q9FUZ2 GLY 121 'engineered mutation' 41 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BB2 non-polymer . ACTINONIN '2-[(FORMYL-HYDROXY-AMINO)-METHYL]-HEPTANOIC ACID [1-(2-HYDROXYMETHYL-PYRROLIDINE-1-CARBONYL)-2-METHYL-PROPYL]-AMIDE' 'C19 H35 N3 O5' 385.498 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3M6Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_percent_sol 53.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details '20% PEG-3350, 0.1M zinc acetate, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2008-02-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.934 # _reflns.entry_id 3M6Q _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.4 _reflns.number_obs 10258 _reflns.number_all 10385 _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.087 _reflns.pdbx_netI_over_sigmaI 22.77 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 12.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.51 _reflns_shell.percent_possible_all 93.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.426 _reflns_shell.meanI_over_sigI_obs 6.10 _reflns_shell.pdbx_redundancy 11.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1504 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3M6Q _refine.ls_number_reflns_obs 9769 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.0 _refine.ls_d_res_high 2.4 _refine.ls_percent_reflns_obs 100 _refine.ls_R_factor_obs 0.2327 _refine.ls_R_factor_all 0.2327 _refine.ls_R_factor_R_work 0.2287 _refine.ls_R_factor_R_free 0.3085 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 515 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 36.8 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 3M6O' _refine.pdbx_method_to_determine_struct 'rigid body' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1409 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 148 _refine_hist.number_atoms_total 1589 _refine_hist.d_res_high 2.4 _refine_hist.d_res_low 45.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.029 ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.294 ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.060 ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.119 ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.883 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.40 _refine_ls_shell.d_res_low 2.429 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.277 _refine_ls_shell.percent_reflns_obs 100 _refine_ls_shell.R_factor_R_free 0.280 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3M6Q _struct.title 'Crystal structure of Arabidopsis thaliana peptide deformylase 1B (AtPDF1B) G41Q mutant in complex with actinonin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3M6Q _struct_keywords.pdbx_keywords HYDROLASE/ANTIBIOTIC _struct_keywords.text ;peptide deformylase, 1B, PDF, N-terminal excision pathway, NME, Arabidopsis thaliana, induced-fit, Hydrolase, Metal-binding, Mitochondrion, Protein biosynthesis, Transit peptide, HYDROLASE-ANTIBIOTIC complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 8 ? ARG A 12 ? ASP A 8 ARG A 12 5 ? 5 HELX_P HELX_P2 2 ASP A 22 ? ASP A 40 ? ASP A 22 ASP A 40 1 ? 19 HELX_P HELX_P3 3 PRO A 47 ? GLY A 50 ? PRO A 47 GLY A 50 5 ? 4 HELX_P HELX_P4 4 SER A 124 ? GLU A 139 ? SER A 124 GLU A 139 1 ? 16 HELX_P HELX_P5 5 LEU A 142 ? ARG A 146 ? LEU A 142 ARG A 146 5 ? 5 HELX_P HELX_P6 6 THR A 148 ? GLY A 171 ? THR A 148 GLY A 171 1 ? 24 HELX_P HELX_P7 7 ARG A 177 ? ARG A 181 ? ARG A 177 ARG A 181 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A MET 1 N ? ? ? 1_555 G ZN . ZN ? ? A MET 1 A ZN 199 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc2 metalc ? ? A MET 1 O ? ? ? 1_555 G ZN . ZN ? ? A MET 1 A ZN 199 1_555 ? ? ? ? ? ? ? 2.420 ? ? metalc3 metalc ? ? A ASP 30 OD1 ? ? ? 1_555 F ZN . ZN ? ? A ASP 30 A ZN 198 1_555 ? ? ? ? ? ? ? 2.002 ? ? metalc4 metalc ? ? A ASP 34 OD1 ? ? ? 1_555 F ZN . ZN ? ? A ASP 34 A ZN 198 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc5 metalc ? ? A ASP 40 OD1 ? ? ? 1_555 D ZN . ZN ? ? A ASP 40 A ZN 196 1_555 ? ? ? ? ? ? ? 2.121 ? ? metalc6 metalc ? ? A GLU 63 OE1 ? ? ? 1_555 D ZN . ZN ? ? A GLU 63 A ZN 196 1_555 ? ? ? ? ? ? ? 2.111 ? ? metalc7 metalc ? ? A CYS 91 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 91 A ZN 195 1_555 ? ? ? ? ? ? ? 2.485 ? ? metalc8 metalc ? ? A HIS 133 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 133 A ZN 195 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc9 metalc ? ? A HIS 137 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 137 A ZN 195 1_555 ? ? ? ? ? ? ? 2.223 ? ? metalc10 metalc ? ? A GLU 160 OE1 ? ? ? 1_555 E ZN . ZN ? ? A GLU 160 A ZN 197 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc11 metalc ? ? A GLU 179 OE1 ? ? ? 1_555 E ZN . ZN ? ? A GLU 179 A ZN 197 1_555 ? ? ? ? ? ? ? 1.886 ? ? metalc12 metalc ? ? B BB2 . O4 ? ? ? 1_555 C ZN . ZN ? ? A BB2 194 A ZN 195 1_555 ? ? ? ? ? ? ? 2.305 ? ? metalc13 metalc ? ? B BB2 . O2 ? ? ? 1_555 C ZN . ZN ? ? A BB2 194 A ZN 195 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc14 metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O ? ? A ZN 196 A HOH 311 1_555 ? ? ? ? ? ? ? 2.092 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 6 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 6 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 7 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 7 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.91 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 43 ? SER A 45 ? GLY A 43 SER A 45 A 2 LEU A 55 ? PHE A 58 ? LEU A 55 PHE A 58 A 3 ILE A 70 ? TYR A 80 ? ILE A 70 TYR A 80 A 4 VAL A 107 ? ARG A 112 ? VAL A 107 ARG A 112 A 5 ARG A 118 ? PHE A 119 ? ARG A 118 PHE A 119 B 1 GLY A 43 ? SER A 45 ? GLY A 43 SER A 45 B 2 LEU A 55 ? PHE A 58 ? LEU A 55 PHE A 58 B 3 ILE A 70 ? TYR A 80 ? ILE A 70 TYR A 80 B 4 VAL A 107 ? ARG A 112 ? VAL A 107 ARG A 112 B 5 SER A 122 ? LEU A 123 ? SER A 122 LEU A 123 C 1 LEU A 84 ? VAL A 85 ? LEU A 84 VAL A 85 C 2 ARG A 103 ? PRO A 104 ? ARG A 103 PRO A 104 D 1 ASP A 88 ? CYS A 91 ? ASP A 88 CYS A 91 D 2 PHE A 94 ? GLU A 100 ? PHE A 94 GLU A 100 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 44 ? N LEU A 44 O VAL A 57 ? O VAL A 57 A 2 3 N PHE A 58 ? N PHE A 58 O ILE A 70 ? O ILE A 70 A 3 4 N VAL A 73 ? N VAL A 73 O ARG A 112 ? O ARG A 112 A 4 5 N ALA A 111 ? N ALA A 111 O PHE A 119 ? O PHE A 119 B 1 2 N LEU A 44 ? N LEU A 44 O VAL A 57 ? O VAL A 57 B 2 3 N PHE A 58 ? N PHE A 58 O ILE A 70 ? O ILE A 70 B 3 4 N VAL A 73 ? N VAL A 73 O ARG A 112 ? O ARG A 112 B 4 5 N VAL A 107 ? N VAL A 107 O LEU A 123 ? O LEU A 123 C 1 2 N VAL A 85 ? N VAL A 85 O ARG A 103 ? O ARG A 103 D 1 2 N GLU A 89 ? N GLU A 89 O ALA A 99 ? O ALA A 99 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BB2 194 ? 16 'BINDING SITE FOR RESIDUE BB2 A 194' AC2 Software A ZN 195 ? 5 'BINDING SITE FOR RESIDUE ZN A 195' AC3 Software A ZN 196 ? 4 'BINDING SITE FOR RESIDUE ZN A 196' AC4 Software A ZN 197 ? 4 'BINDING SITE FOR RESIDUE ZN A 197' AC5 Software A ZN 198 ? 3 'BINDING SITE FOR RESIDUE ZN A 198' AC6 Software A ZN 199 ? 4 'BINDING SITE FOR RESIDUE ZN A 199' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 ASP A 40 ? ASP A 40 . ? 1_555 ? 2 AC1 16 GLN A 41 ? GLN A 41 . ? 1_555 ? 3 AC1 16 ILE A 42 ? ILE A 42 . ? 1_555 ? 4 AC1 16 GLY A 43 ? GLY A 43 . ? 1_555 ? 5 AC1 16 GLN A 48 ? GLN A 48 . ? 1_555 ? 6 AC1 16 PHE A 87 ? PHE A 87 . ? 1_555 ? 7 AC1 16 ASP A 88 ? ASP A 88 . ? 1_555 ? 8 AC1 16 GLY A 90 ? GLY A 90 . ? 1_555 ? 9 AC1 16 CYS A 91 ? CYS A 91 . ? 1_555 ? 10 AC1 16 LEU A 92 ? LEU A 92 . ? 1_555 ? 11 AC1 16 TYR A 98 ? TYR A 98 . ? 1_555 ? 12 AC1 16 ILE A 130 ? ILE A 130 . ? 1_555 ? 13 AC1 16 HIS A 133 ? HIS A 133 . ? 1_555 ? 14 AC1 16 GLU A 134 ? GLU A 134 . ? 1_555 ? 15 AC1 16 HIS A 137 ? HIS A 137 . ? 1_555 ? 16 AC1 16 ZN C . ? ZN A 195 . ? 1_555 ? 17 AC2 5 GLN A 48 ? GLN A 48 . ? 1_555 ? 18 AC2 5 CYS A 91 ? CYS A 91 . ? 1_555 ? 19 AC2 5 HIS A 133 ? HIS A 133 . ? 1_555 ? 20 AC2 5 HIS A 137 ? HIS A 137 . ? 1_555 ? 21 AC2 5 BB2 B . ? BB2 A 194 . ? 1_555 ? 22 AC3 4 LYS A 38 ? LYS A 38 . ? 8_554 ? 23 AC3 4 ASP A 40 ? ASP A 40 . ? 1_555 ? 24 AC3 4 GLU A 63 ? GLU A 63 . ? 1_555 ? 25 AC3 4 HOH H . ? HOH A 311 . ? 1_555 ? 26 AC4 4 GLU A 66 ? GLU A 66 . ? 4_545 ? 27 AC4 4 GLU A 160 ? GLU A 160 . ? 1_555 ? 28 AC4 4 GLU A 179 ? GLU A 179 . ? 1_555 ? 29 AC4 4 ZN G . ? ZN A 199 . ? 5_544 ? 30 AC5 3 ASP A 30 ? ASP A 30 . ? 1_555 ? 31 AC5 3 ASP A 34 ? ASP A 34 . ? 1_555 ? 32 AC5 3 GLU A 69 ? GLU A 69 . ? 8_554 ? 33 AC6 4 MET A 1 ? MET A 1 . ? 1_555 ? 34 AC6 4 GLU A 157 ? GLU A 157 . ? 5_554 ? 35 AC6 4 GLU A 160 ? GLU A 160 . ? 5_554 ? 36 AC6 4 ZN E . ? ZN A 197 . ? 5_554 ? # _database_PDB_matrix.entry_id 3M6Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3M6Q _atom_sites.fract_transf_matrix[1][1] 0.017658 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017658 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006824 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 CYS 91 91 91 CYS CYS A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 PHE 119 119 119 PHE PHE A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 ILE 121 121 121 ILE ILE A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 PHE 131 131 131 PHE PHE A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 HIS 133 133 133 HIS HIS A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 TYR 135 135 135 TYR TYR A . n A 1 136 ASP 136 136 136 ASP ASP A . n A 1 137 HIS 137 137 137 HIS HIS A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 MET 147 147 147 MET MET A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 GLN 150 150 150 GLN GLN A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 LYS 164 164 164 LYS LYS A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 TYR 166 166 166 TYR TYR A . n A 1 167 GLU 167 167 167 GLU GLU A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 LYS 169 169 169 LYS LYS A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 VAL 178 178 178 VAL VAL A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 GLN 182 182 ? ? ? A . n A 1 183 LYS 183 183 ? ? ? A . n A 1 184 ARG 184 184 ? ? ? A . n A 1 185 LYS 185 185 ? ? ? A . n A 1 186 ALA 186 186 ? ? ? A . n A 1 187 GLY 187 187 ? ? ? A . n A 1 188 VAL 188 188 ? ? ? A . n A 1 189 GLY 189 189 ? ? ? A . n A 1 190 PHE 190 190 ? ? ? A . n A 1 191 GLY 191 191 ? ? ? A . n A 1 192 LYS 192 192 ? ? ? A . n A 1 193 ARG 193 193 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BB2 1 194 1 BB2 BB2 A . C 3 ZN 1 195 1 ZN ZN A . D 3 ZN 1 196 2 ZN ZN A . E 3 ZN 1 197 3 ZN ZN A . F 3 ZN 1 198 4 ZN ZN A . G 3 ZN 1 199 5 ZN ZN A . H 4 HOH 1 200 6 HOH HOH A . H 4 HOH 2 201 7 HOH HOH A . H 4 HOH 3 202 8 HOH HOH A . H 4 HOH 4 203 9 HOH HOH A . H 4 HOH 5 204 10 HOH HOH A . H 4 HOH 6 205 11 HOH HOH A . H 4 HOH 7 206 12 HOH HOH A . H 4 HOH 8 207 13 HOH HOH A . H 4 HOH 9 208 14 HOH HOH A . H 4 HOH 10 209 15 HOH HOH A . H 4 HOH 11 210 16 HOH HOH A . H 4 HOH 12 211 17 HOH HOH A . H 4 HOH 13 212 18 HOH HOH A . H 4 HOH 14 213 19 HOH HOH A . H 4 HOH 15 214 20 HOH HOH A . H 4 HOH 16 215 21 HOH HOH A . H 4 HOH 17 216 22 HOH HOH A . H 4 HOH 18 217 23 HOH HOH A . H 4 HOH 19 218 24 HOH HOH A . H 4 HOH 20 219 25 HOH HOH A . H 4 HOH 21 220 26 HOH HOH A . H 4 HOH 22 221 27 HOH HOH A . H 4 HOH 23 222 28 HOH HOH A . H 4 HOH 24 223 29 HOH HOH A . H 4 HOH 25 224 30 HOH HOH A . H 4 HOH 26 225 31 HOH HOH A . H 4 HOH 27 226 32 HOH HOH A . H 4 HOH 28 227 33 HOH HOH A . H 4 HOH 29 228 34 HOH HOH A . H 4 HOH 30 229 35 HOH HOH A . H 4 HOH 31 230 36 HOH HOH A . H 4 HOH 32 231 37 HOH HOH A . H 4 HOH 33 232 38 HOH HOH A . H 4 HOH 34 233 39 HOH HOH A . H 4 HOH 35 234 40 HOH HOH A . H 4 HOH 36 235 41 HOH HOH A . H 4 HOH 37 236 42 HOH HOH A . H 4 HOH 38 237 43 HOH HOH A . H 4 HOH 39 238 44 HOH HOH A . H 4 HOH 40 239 45 HOH HOH A . H 4 HOH 41 240 46 HOH HOH A . H 4 HOH 42 241 47 HOH HOH A . H 4 HOH 43 242 48 HOH HOH A . H 4 HOH 44 243 49 HOH HOH A . H 4 HOH 45 244 50 HOH HOH A . H 4 HOH 46 245 51 HOH HOH A . H 4 HOH 47 246 52 HOH HOH A . H 4 HOH 48 247 53 HOH HOH A . H 4 HOH 49 248 54 HOH HOH A . H 4 HOH 50 249 55 HOH HOH A . H 4 HOH 51 250 56 HOH HOH A . H 4 HOH 52 251 57 HOH HOH A . H 4 HOH 53 252 58 HOH HOH A . H 4 HOH 54 253 59 HOH HOH A . H 4 HOH 55 254 60 HOH HOH A . H 4 HOH 56 255 61 HOH HOH A . H 4 HOH 57 256 62 HOH HOH A . H 4 HOH 58 257 63 HOH HOH A . H 4 HOH 59 258 64 HOH HOH A . H 4 HOH 60 259 65 HOH HOH A . H 4 HOH 61 260 66 HOH HOH A . H 4 HOH 62 261 67 HOH HOH A . H 4 HOH 63 262 68 HOH HOH A . H 4 HOH 64 263 69 HOH HOH A . H 4 HOH 65 264 70 HOH HOH A . H 4 HOH 66 265 71 HOH HOH A . H 4 HOH 67 266 72 HOH HOH A . H 4 HOH 68 267 73 HOH HOH A . H 4 HOH 69 268 74 HOH HOH A . H 4 HOH 70 269 75 HOH HOH A . H 4 HOH 71 270 76 HOH HOH A . H 4 HOH 72 271 77 HOH HOH A . H 4 HOH 73 272 78 HOH HOH A . H 4 HOH 74 273 79 HOH HOH A . H 4 HOH 75 274 80 HOH HOH A . H 4 HOH 76 275 81 HOH HOH A . H 4 HOH 77 276 82 HOH HOH A . H 4 HOH 78 277 83 HOH HOH A . H 4 HOH 79 278 84 HOH HOH A . H 4 HOH 80 279 85 HOH HOH A . H 4 HOH 81 280 86 HOH HOH A . H 4 HOH 82 281 87 HOH HOH A . H 4 HOH 83 282 88 HOH HOH A . H 4 HOH 84 283 89 HOH HOH A . H 4 HOH 85 284 90 HOH HOH A . H 4 HOH 86 285 91 HOH HOH A . H 4 HOH 87 286 92 HOH HOH A . H 4 HOH 88 287 93 HOH HOH A . H 4 HOH 89 288 94 HOH HOH A . H 4 HOH 90 289 95 HOH HOH A . H 4 HOH 91 290 96 HOH HOH A . H 4 HOH 92 291 97 HOH HOH A . H 4 HOH 93 292 98 HOH HOH A . H 4 HOH 94 293 99 HOH HOH A . H 4 HOH 95 294 100 HOH HOH A . H 4 HOH 96 295 101 HOH HOH A . H 4 HOH 97 296 102 HOH HOH A . H 4 HOH 98 297 103 HOH HOH A . H 4 HOH 99 298 104 HOH HOH A . H 4 HOH 100 299 105 HOH HOH A . H 4 HOH 101 300 106 HOH HOH A . H 4 HOH 102 301 107 HOH HOH A . H 4 HOH 103 302 108 HOH HOH A . H 4 HOH 104 303 109 HOH HOH A . H 4 HOH 105 304 110 HOH HOH A . H 4 HOH 106 305 111 HOH HOH A . H 4 HOH 107 306 112 HOH HOH A . H 4 HOH 108 307 113 HOH HOH A . H 4 HOH 109 308 114 HOH HOH A . H 4 HOH 110 309 115 HOH HOH A . H 4 HOH 111 310 116 HOH HOH A . H 4 HOH 112 311 117 HOH HOH A . H 4 HOH 113 312 118 HOH HOH A . H 4 HOH 114 313 119 HOH HOH A . H 4 HOH 115 314 120 HOH HOH A . H 4 HOH 116 315 121 HOH HOH A . H 4 HOH 117 316 122 HOH HOH A . H 4 HOH 118 317 123 HOH HOH A . H 4 HOH 119 318 124 HOH HOH A . H 4 HOH 120 319 125 HOH HOH A . H 4 HOH 121 320 126 HOH HOH A . H 4 HOH 122 321 128 HOH HOH A . H 4 HOH 123 322 129 HOH HOH A . H 4 HOH 124 323 130 HOH HOH A . H 4 HOH 125 324 131 HOH HOH A . H 4 HOH 126 325 132 HOH HOH A . H 4 HOH 127 326 133 HOH HOH A . H 4 HOH 128 327 134 HOH HOH A . H 4 HOH 129 328 135 HOH HOH A . H 4 HOH 130 329 136 HOH HOH A . H 4 HOH 131 330 137 HOH HOH A . H 4 HOH 132 331 138 HOH HOH A . H 4 HOH 133 332 139 HOH HOH A . H 4 HOH 134 333 140 HOH HOH A . H 4 HOH 135 334 141 HOH HOH A . H 4 HOH 136 335 142 HOH HOH A . H 4 HOH 137 336 143 HOH HOH A . H 4 HOH 138 337 144 HOH HOH A . H 4 HOH 139 338 145 HOH HOH A . H 4 HOH 140 339 146 HOH HOH A . H 4 HOH 141 340 147 HOH HOH A . H 4 HOH 142 341 148 HOH HOH A . H 4 HOH 143 342 149 HOH HOH A . H 4 HOH 144 343 150 HOH HOH A . H 4 HOH 145 344 151 HOH HOH A . H 4 HOH 146 345 152 HOH HOH A . H 4 HOH 147 346 153 HOH HOH A . H 4 HOH 148 347 154 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N ? A MET 1 ? A MET 1 ? 1_555 ZN ? G ZN . ? A ZN 199 ? 1_555 O ? A MET 1 ? A MET 1 ? 1_555 70.7 ? 2 OD1 ? A ASP 30 ? A ASP 30 ? 1_555 ZN ? F ZN . ? A ZN 198 ? 1_555 OD1 ? A ASP 34 ? A ASP 34 ? 1_555 110.5 ? 3 OD1 ? A ASP 40 ? A ASP 40 ? 1_555 ZN ? D ZN . ? A ZN 196 ? 1_555 OE1 ? A GLU 63 ? A GLU 63 ? 1_555 141.3 ? 4 OD1 ? A ASP 40 ? A ASP 40 ? 1_555 ZN ? D ZN . ? A ZN 196 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 103.6 ? 5 OE1 ? A GLU 63 ? A GLU 63 ? 1_555 ZN ? D ZN . ? A ZN 196 ? 1_555 O ? H HOH . ? A HOH 311 ? 1_555 97.5 ? 6 SG ? A CYS 91 ? A CYS 91 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 NE2 ? A HIS 133 ? A HIS 133 ? 1_555 106.4 ? 7 SG ? A CYS 91 ? A CYS 91 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 NE2 ? A HIS 137 ? A HIS 137 ? 1_555 103.4 ? 8 NE2 ? A HIS 133 ? A HIS 133 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 NE2 ? A HIS 137 ? A HIS 137 ? 1_555 112.0 ? 9 SG ? A CYS 91 ? A CYS 91 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 O4 ? B BB2 . ? A BB2 194 ? 1_555 84.8 ? 10 NE2 ? A HIS 133 ? A HIS 133 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 O4 ? B BB2 . ? A BB2 194 ? 1_555 104.9 ? 11 NE2 ? A HIS 137 ? A HIS 137 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 O4 ? B BB2 . ? A BB2 194 ? 1_555 137.7 ? 12 SG ? A CYS 91 ? A CYS 91 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 O2 ? B BB2 . ? A BB2 194 ? 1_555 141.1 ? 13 NE2 ? A HIS 133 ? A HIS 133 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 O2 ? B BB2 . ? A BB2 194 ? 1_555 102.5 ? 14 NE2 ? A HIS 137 ? A HIS 137 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 O2 ? B BB2 . ? A BB2 194 ? 1_555 89.0 ? 15 O4 ? B BB2 . ? A BB2 194 ? 1_555 ZN ? C ZN . ? A ZN 195 ? 1_555 O2 ? B BB2 . ? A BB2 194 ? 1_555 62.8 ? 16 OE1 ? A GLU 160 ? A GLU 160 ? 1_555 ZN ? E ZN . ? A ZN 197 ? 1_555 OE1 ? A GLU 179 ? A GLU 179 ? 1_555 121.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-03-21 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 4 'Structure model' '_struct_ref_seq_dif.details' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A VAL 101 ? ? NH2 A ARG 129 ? ? 2.12 2 1 OE1 A GLU 134 ? ? N1 A BB2 194 ? ? 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 8 ? ? CG A ASP 8 ? ? OD2 A ASP 8 ? ? 124.10 118.30 5.80 0.90 N 2 1 CB A ASP 34 ? ? CG A ASP 34 ? ? OD1 A ASP 34 ? ? 111.21 118.30 -7.09 0.90 N 3 1 CB A ASP 34 ? ? CG A ASP 34 ? ? OD2 A ASP 34 ? ? 124.05 118.30 5.75 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 7 ? ? -88.74 30.03 2 1 PHE A 58 ? ? -162.37 116.49 3 1 LYS A 79 ? ? 179.62 155.08 4 1 PHE A 87 ? ? 172.04 153.02 5 1 ALA A 99 ? ? 179.55 176.82 6 1 ARG A 125 ? ? 50.41 -143.71 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 23 ? CG ? A GLU 23 CG 2 1 Y 1 A GLU 23 ? CD ? A GLU 23 CD 3 1 Y 1 A GLU 23 ? OE1 ? A GLU 23 OE1 4 1 Y 1 A GLU 23 ? OE2 ? A GLU 23 OE2 5 1 Y 1 A LYS 26 ? CG ? A LYS 26 CG 6 1 Y 1 A LYS 26 ? CD ? A LYS 26 CD 7 1 Y 1 A LYS 26 ? CE ? A LYS 26 CE 8 1 Y 1 A LYS 26 ? NZ ? A LYS 26 NZ 9 1 Y 1 A LYS 78 ? CG ? A LYS 78 CG 10 1 Y 1 A LYS 78 ? CD ? A LYS 78 CD 11 1 Y 1 A LYS 78 ? CE ? A LYS 78 CE 12 1 Y 1 A LYS 78 ? NZ ? A LYS 78 NZ 13 1 Y 1 A LYS 79 ? CG ? A LYS 79 CG 14 1 Y 1 A LYS 79 ? CD ? A LYS 79 CD 15 1 Y 1 A LYS 79 ? CE ? A LYS 79 CE 16 1 Y 1 A LYS 79 ? NZ ? A LYS 79 NZ 17 1 Y 1 A ASP 82 ? CG ? A ASP 82 CG 18 1 Y 1 A ASP 82 ? OD1 ? A ASP 82 OD1 19 1 Y 1 A ASP 82 ? OD2 ? A ASP 82 OD2 20 1 Y 1 A LYS 108 ? CG ? A LYS 108 CG 21 1 Y 1 A LYS 108 ? CD ? A LYS 108 CD 22 1 Y 1 A LYS 108 ? CE ? A LYS 108 CE 23 1 Y 1 A LYS 108 ? NZ ? A LYS 108 NZ 24 1 Y 1 A GLU 117 ? CG ? A GLU 117 CG 25 1 Y 1 A GLU 117 ? CD ? A GLU 117 CD 26 1 Y 1 A GLU 117 ? OE1 ? A GLU 117 OE1 27 1 Y 1 A GLU 117 ? OE2 ? A GLU 117 OE2 28 1 Y 1 A ARG 125 ? CG ? A ARG 125 CG 29 1 Y 1 A ARG 125 ? CD ? A ARG 125 CD 30 1 Y 1 A ARG 125 ? NE ? A ARG 125 NE 31 1 Y 1 A ARG 125 ? CZ ? A ARG 125 CZ 32 1 Y 1 A ARG 125 ? NH1 ? A ARG 125 NH1 33 1 Y 1 A ARG 125 ? NH2 ? A ARG 125 NH2 34 1 Y 1 A GLN 150 ? CG ? A GLN 150 CG 35 1 Y 1 A GLN 150 ? CD ? A GLN 150 CD 36 1 Y 1 A GLN 150 ? OE1 ? A GLN 150 OE1 37 1 Y 1 A GLN 150 ? NE2 ? A GLN 150 NE2 38 1 Y 1 A LYS 169 ? CG ? A LYS 169 CG 39 1 Y 1 A LYS 169 ? CD ? A LYS 169 CD 40 1 Y 1 A LYS 169 ? CE ? A LYS 169 CE 41 1 Y 1 A LYS 169 ? NZ ? A LYS 169 NZ 42 1 Y 1 A ARG 181 ? CG ? A ARG 181 CG 43 1 Y 1 A ARG 181 ? CD ? A ARG 181 CD 44 1 Y 1 A ARG 181 ? NE ? A ARG 181 NE 45 1 Y 1 A ARG 181 ? CZ ? A ARG 181 CZ 46 1 Y 1 A ARG 181 ? NH1 ? A ARG 181 NH1 47 1 Y 1 A ARG 181 ? NH2 ? A ARG 181 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 182 ? A GLN 182 2 1 Y 1 A LYS 183 ? A LYS 183 3 1 Y 1 A ARG 184 ? A ARG 184 4 1 Y 1 A LYS 185 ? A LYS 185 5 1 Y 1 A ALA 186 ? A ALA 186 6 1 Y 1 A GLY 187 ? A GLY 187 7 1 Y 1 A VAL 188 ? A VAL 188 8 1 Y 1 A GLY 189 ? A GLY 189 9 1 Y 1 A PHE 190 ? A PHE 190 10 1 Y 1 A GLY 191 ? A GLY 191 11 1 Y 1 A LYS 192 ? A LYS 192 12 1 Y 1 A ARG 193 ? A ARG 193 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BB2 C5 C N N 74 BB2 C3 C N N 75 BB2 O4 O N N 76 BB2 N1 N N N 77 BB2 O2 O N N 78 BB2 C6 C N R 79 BB2 C12 C N N 80 BB2 O13 O N N 81 BB2 C7 C N N 82 BB2 C8 C N N 83 BB2 C9 C N N 84 BB2 C10 C N N 85 BB2 C11 C N N 86 BB2 N14 N N N 87 BB2 C15 C N S 88 BB2 C16 C N N 89 BB2 C18 C N N 90 BB2 C17 C N N 91 BB2 C19 C N N 92 BB2 O20 O N N 93 BB2 N21 N N N 94 BB2 C22 C N S 95 BB2 C23 C N N 96 BB2 C24 C N N 97 BB2 C25 C N N 98 BB2 C26 C N N 99 BB2 O27 O N N 100 BB2 H51 H N N 101 BB2 H52 H N N 102 BB2 HN1 H N N 103 BB2 HO2 H N N 104 BB2 H6 H N N 105 BB2 H71 H N N 106 BB2 H72 H N N 107 BB2 H81 H N N 108 BB2 H82 H N N 109 BB2 H91 H N N 110 BB2 H92 H N N 111 BB2 H101 H N N 112 BB2 H102 H N N 113 BB2 H111 H N N 114 BB2 H112 H N N 115 BB2 H113 H N N 116 BB2 H14 H N N 117 BB2 H15 H N N 118 BB2 H16 H N N 119 BB2 H181 H N N 120 BB2 H182 H N N 121 BB2 H183 H N N 122 BB2 H171 H N N 123 BB2 H172 H N N 124 BB2 H173 H N N 125 BB2 H22 H N N 126 BB2 H231 H N N 127 BB2 H232 H N N 128 BB2 H241 H N N 129 BB2 H242 H N N 130 BB2 H251 H N N 131 BB2 H252 H N N 132 BB2 H261 H N N 133 BB2 H262 H N N 134 BB2 H27 H N N 135 CYS N N N N 136 CYS CA C N R 137 CYS C C N N 138 CYS O O N N 139 CYS CB C N N 140 CYS SG S N N 141 CYS OXT O N N 142 CYS H H N N 143 CYS H2 H N N 144 CYS HA H N N 145 CYS HB2 H N N 146 CYS HB3 H N N 147 CYS HG H N N 148 CYS HXT H N N 149 GLN N N N N 150 GLN CA C N S 151 GLN C C N N 152 GLN O O N N 153 GLN CB C N N 154 GLN CG C N N 155 GLN CD C N N 156 GLN OE1 O N N 157 GLN NE2 N N N 158 GLN OXT O N N 159 GLN H H N N 160 GLN H2 H N N 161 GLN HA H N N 162 GLN HB2 H N N 163 GLN HB3 H N N 164 GLN HG2 H N N 165 GLN HG3 H N N 166 GLN HE21 H N N 167 GLN HE22 H N N 168 GLN HXT H N N 169 GLU N N N N 170 GLU CA C N S 171 GLU C C N N 172 GLU O O N N 173 GLU CB C N N 174 GLU CG C N N 175 GLU CD C N N 176 GLU OE1 O N N 177 GLU OE2 O N N 178 GLU OXT O N N 179 GLU H H N N 180 GLU H2 H N N 181 GLU HA H N N 182 GLU HB2 H N N 183 GLU HB3 H N N 184 GLU HG2 H N N 185 GLU HG3 H N N 186 GLU HE2 H N N 187 GLU HXT H N N 188 GLY N N N N 189 GLY CA C N N 190 GLY C C N N 191 GLY O O N N 192 GLY OXT O N N 193 GLY H H N N 194 GLY H2 H N N 195 GLY HA2 H N N 196 GLY HA3 H N N 197 GLY HXT H N N 198 HIS N N N N 199 HIS CA C N S 200 HIS C C N N 201 HIS O O N N 202 HIS CB C N N 203 HIS CG C Y N 204 HIS ND1 N Y N 205 HIS CD2 C Y N 206 HIS CE1 C Y N 207 HIS NE2 N Y N 208 HIS OXT O N N 209 HIS H H N N 210 HIS H2 H N N 211 HIS HA H N N 212 HIS HB2 H N N 213 HIS HB3 H N N 214 HIS HD1 H N N 215 HIS HD2 H N N 216 HIS HE1 H N N 217 HIS HE2 H N N 218 HIS HXT H N N 219 HOH O O N N 220 HOH H1 H N N 221 HOH H2 H N N 222 ILE N N N N 223 ILE CA C N S 224 ILE C C N N 225 ILE O O N N 226 ILE CB C N S 227 ILE CG1 C N N 228 ILE CG2 C N N 229 ILE CD1 C N N 230 ILE OXT O N N 231 ILE H H N N 232 ILE H2 H N N 233 ILE HA H N N 234 ILE HB H N N 235 ILE HG12 H N N 236 ILE HG13 H N N 237 ILE HG21 H N N 238 ILE HG22 H N N 239 ILE HG23 H N N 240 ILE HD11 H N N 241 ILE HD12 H N N 242 ILE HD13 H N N 243 ILE HXT H N N 244 LEU N N N N 245 LEU CA C N S 246 LEU C C N N 247 LEU O O N N 248 LEU CB C N N 249 LEU CG C N N 250 LEU CD1 C N N 251 LEU CD2 C N N 252 LEU OXT O N N 253 LEU H H N N 254 LEU H2 H N N 255 LEU HA H N N 256 LEU HB2 H N N 257 LEU HB3 H N N 258 LEU HG H N N 259 LEU HD11 H N N 260 LEU HD12 H N N 261 LEU HD13 H N N 262 LEU HD21 H N N 263 LEU HD22 H N N 264 LEU HD23 H N N 265 LEU HXT H N N 266 LYS N N N N 267 LYS CA C N S 268 LYS C C N N 269 LYS O O N N 270 LYS CB C N N 271 LYS CG C N N 272 LYS CD C N N 273 LYS CE C N N 274 LYS NZ N N N 275 LYS OXT O N N 276 LYS H H N N 277 LYS H2 H N N 278 LYS HA H N N 279 LYS HB2 H N N 280 LYS HB3 H N N 281 LYS HG2 H N N 282 LYS HG3 H N N 283 LYS HD2 H N N 284 LYS HD3 H N N 285 LYS HE2 H N N 286 LYS HE3 H N N 287 LYS HZ1 H N N 288 LYS HZ2 H N N 289 LYS HZ3 H N N 290 LYS HXT H N N 291 MET N N N N 292 MET CA C N S 293 MET C C N N 294 MET O O N N 295 MET CB C N N 296 MET CG C N N 297 MET SD S N N 298 MET CE C N N 299 MET OXT O N N 300 MET H H N N 301 MET H2 H N N 302 MET HA H N N 303 MET HB2 H N N 304 MET HB3 H N N 305 MET HG2 H N N 306 MET HG3 H N N 307 MET HE1 H N N 308 MET HE2 H N N 309 MET HE3 H N N 310 MET HXT H N N 311 PHE N N N N 312 PHE CA C N S 313 PHE C C N N 314 PHE O O N N 315 PHE CB C N N 316 PHE CG C Y N 317 PHE CD1 C Y N 318 PHE CD2 C Y N 319 PHE CE1 C Y N 320 PHE CE2 C Y N 321 PHE CZ C Y N 322 PHE OXT O N N 323 PHE H H N N 324 PHE H2 H N N 325 PHE HA H N N 326 PHE HB2 H N N 327 PHE HB3 H N N 328 PHE HD1 H N N 329 PHE HD2 H N N 330 PHE HE1 H N N 331 PHE HE2 H N N 332 PHE HZ H N N 333 PHE HXT H N N 334 PRO N N N N 335 PRO CA C N S 336 PRO C C N N 337 PRO O O N N 338 PRO CB C N N 339 PRO CG C N N 340 PRO CD C N N 341 PRO OXT O N N 342 PRO H H N N 343 PRO HA H N N 344 PRO HB2 H N N 345 PRO HB3 H N N 346 PRO HG2 H N N 347 PRO HG3 H N N 348 PRO HD2 H N N 349 PRO HD3 H N N 350 PRO HXT H N N 351 SER N N N N 352 SER CA C N S 353 SER C C N N 354 SER O O N N 355 SER CB C N N 356 SER OG O N N 357 SER OXT O N N 358 SER H H N N 359 SER H2 H N N 360 SER HA H N N 361 SER HB2 H N N 362 SER HB3 H N N 363 SER HG H N N 364 SER HXT H N N 365 THR N N N N 366 THR CA C N S 367 THR C C N N 368 THR O O N N 369 THR CB C N R 370 THR OG1 O N N 371 THR CG2 C N N 372 THR OXT O N N 373 THR H H N N 374 THR H2 H N N 375 THR HA H N N 376 THR HB H N N 377 THR HG1 H N N 378 THR HG21 H N N 379 THR HG22 H N N 380 THR HG23 H N N 381 THR HXT H N N 382 TYR N N N N 383 TYR CA C N S 384 TYR C C N N 385 TYR O O N N 386 TYR CB C N N 387 TYR CG C Y N 388 TYR CD1 C Y N 389 TYR CD2 C Y N 390 TYR CE1 C Y N 391 TYR CE2 C Y N 392 TYR CZ C Y N 393 TYR OH O N N 394 TYR OXT O N N 395 TYR H H N N 396 TYR H2 H N N 397 TYR HA H N N 398 TYR HB2 H N N 399 TYR HB3 H N N 400 TYR HD1 H N N 401 TYR HD2 H N N 402 TYR HE1 H N N 403 TYR HE2 H N N 404 TYR HH H N N 405 TYR HXT H N N 406 VAL N N N N 407 VAL CA C N S 408 VAL C C N N 409 VAL O O N N 410 VAL CB C N N 411 VAL CG1 C N N 412 VAL CG2 C N N 413 VAL OXT O N N 414 VAL H H N N 415 VAL H2 H N N 416 VAL HA H N N 417 VAL HB H N N 418 VAL HG11 H N N 419 VAL HG12 H N N 420 VAL HG13 H N N 421 VAL HG21 H N N 422 VAL HG22 H N N 423 VAL HG23 H N N 424 VAL HXT H N N 425 ZN ZN ZN N N 426 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BB2 C5 C3 sing N N 70 BB2 C5 C6 sing N N 71 BB2 C5 H51 sing N N 72 BB2 C5 H52 sing N N 73 BB2 C3 O4 doub N N 74 BB2 C3 N1 sing N N 75 BB2 N1 O2 sing N N 76 BB2 N1 HN1 sing N N 77 BB2 O2 HO2 sing N N 78 BB2 C6 C12 sing N N 79 BB2 C6 C7 sing N N 80 BB2 C6 H6 sing N N 81 BB2 C12 O13 doub N N 82 BB2 C12 N14 sing N N 83 BB2 C7 C8 sing N N 84 BB2 C7 H71 sing N N 85 BB2 C7 H72 sing N N 86 BB2 C8 C9 sing N N 87 BB2 C8 H81 sing N N 88 BB2 C8 H82 sing N N 89 BB2 C9 C10 sing N N 90 BB2 C9 H91 sing N N 91 BB2 C9 H92 sing N N 92 BB2 C10 C11 sing N N 93 BB2 C10 H101 sing N N 94 BB2 C10 H102 sing N N 95 BB2 C11 H111 sing N N 96 BB2 C11 H112 sing N N 97 BB2 C11 H113 sing N N 98 BB2 N14 C15 sing N N 99 BB2 N14 H14 sing N N 100 BB2 C15 C16 sing N N 101 BB2 C15 C19 sing N N 102 BB2 C15 H15 sing N N 103 BB2 C16 C18 sing N N 104 BB2 C16 C17 sing N N 105 BB2 C16 H16 sing N N 106 BB2 C18 H181 sing N N 107 BB2 C18 H182 sing N N 108 BB2 C18 H183 sing N N 109 BB2 C17 H171 sing N N 110 BB2 C17 H172 sing N N 111 BB2 C17 H173 sing N N 112 BB2 C19 O20 doub N N 113 BB2 C19 N21 sing N N 114 BB2 N21 C22 sing N N 115 BB2 N21 C23 sing N N 116 BB2 C22 C25 sing N N 117 BB2 C22 C26 sing N N 118 BB2 C22 H22 sing N N 119 BB2 C23 C24 sing N N 120 BB2 C23 H231 sing N N 121 BB2 C23 H232 sing N N 122 BB2 C24 C25 sing N N 123 BB2 C24 H241 sing N N 124 BB2 C24 H242 sing N N 125 BB2 C25 H251 sing N N 126 BB2 C25 H252 sing N N 127 BB2 C26 O27 sing N N 128 BB2 C26 H261 sing N N 129 BB2 C26 H262 sing N N 130 BB2 O27 H27 sing N N 131 CYS N CA sing N N 132 CYS N H sing N N 133 CYS N H2 sing N N 134 CYS CA C sing N N 135 CYS CA CB sing N N 136 CYS CA HA sing N N 137 CYS C O doub N N 138 CYS C OXT sing N N 139 CYS CB SG sing N N 140 CYS CB HB2 sing N N 141 CYS CB HB3 sing N N 142 CYS SG HG sing N N 143 CYS OXT HXT sing N N 144 GLN N CA sing N N 145 GLN N H sing N N 146 GLN N H2 sing N N 147 GLN CA C sing N N 148 GLN CA CB sing N N 149 GLN CA HA sing N N 150 GLN C O doub N N 151 GLN C OXT sing N N 152 GLN CB CG sing N N 153 GLN CB HB2 sing N N 154 GLN CB HB3 sing N N 155 GLN CG CD sing N N 156 GLN CG HG2 sing N N 157 GLN CG HG3 sing N N 158 GLN CD OE1 doub N N 159 GLN CD NE2 sing N N 160 GLN NE2 HE21 sing N N 161 GLN NE2 HE22 sing N N 162 GLN OXT HXT sing N N 163 GLU N CA sing N N 164 GLU N H sing N N 165 GLU N H2 sing N N 166 GLU CA C sing N N 167 GLU CA CB sing N N 168 GLU CA HA sing N N 169 GLU C O doub N N 170 GLU C OXT sing N N 171 GLU CB CG sing N N 172 GLU CB HB2 sing N N 173 GLU CB HB3 sing N N 174 GLU CG CD sing N N 175 GLU CG HG2 sing N N 176 GLU CG HG3 sing N N 177 GLU CD OE1 doub N N 178 GLU CD OE2 sing N N 179 GLU OE2 HE2 sing N N 180 GLU OXT HXT sing N N 181 GLY N CA sing N N 182 GLY N H sing N N 183 GLY N H2 sing N N 184 GLY CA C sing N N 185 GLY CA HA2 sing N N 186 GLY CA HA3 sing N N 187 GLY C O doub N N 188 GLY C OXT sing N N 189 GLY OXT HXT sing N N 190 HIS N CA sing N N 191 HIS N H sing N N 192 HIS N H2 sing N N 193 HIS CA C sing N N 194 HIS CA CB sing N N 195 HIS CA HA sing N N 196 HIS C O doub N N 197 HIS C OXT sing N N 198 HIS CB CG sing N N 199 HIS CB HB2 sing N N 200 HIS CB HB3 sing N N 201 HIS CG ND1 sing Y N 202 HIS CG CD2 doub Y N 203 HIS ND1 CE1 doub Y N 204 HIS ND1 HD1 sing N N 205 HIS CD2 NE2 sing Y N 206 HIS CD2 HD2 sing N N 207 HIS CE1 NE2 sing Y N 208 HIS CE1 HE1 sing N N 209 HIS NE2 HE2 sing N N 210 HIS OXT HXT sing N N 211 HOH O H1 sing N N 212 HOH O H2 sing N N 213 ILE N CA sing N N 214 ILE N H sing N N 215 ILE N H2 sing N N 216 ILE CA C sing N N 217 ILE CA CB sing N N 218 ILE CA HA sing N N 219 ILE C O doub N N 220 ILE C OXT sing N N 221 ILE CB CG1 sing N N 222 ILE CB CG2 sing N N 223 ILE CB HB sing N N 224 ILE CG1 CD1 sing N N 225 ILE CG1 HG12 sing N N 226 ILE CG1 HG13 sing N N 227 ILE CG2 HG21 sing N N 228 ILE CG2 HG22 sing N N 229 ILE CG2 HG23 sing N N 230 ILE CD1 HD11 sing N N 231 ILE CD1 HD12 sing N N 232 ILE CD1 HD13 sing N N 233 ILE OXT HXT sing N N 234 LEU N CA sing N N 235 LEU N H sing N N 236 LEU N H2 sing N N 237 LEU CA C sing N N 238 LEU CA CB sing N N 239 LEU CA HA sing N N 240 LEU C O doub N N 241 LEU C OXT sing N N 242 LEU CB CG sing N N 243 LEU CB HB2 sing N N 244 LEU CB HB3 sing N N 245 LEU CG CD1 sing N N 246 LEU CG CD2 sing N N 247 LEU CG HG sing N N 248 LEU CD1 HD11 sing N N 249 LEU CD1 HD12 sing N N 250 LEU CD1 HD13 sing N N 251 LEU CD2 HD21 sing N N 252 LEU CD2 HD22 sing N N 253 LEU CD2 HD23 sing N N 254 LEU OXT HXT sing N N 255 LYS N CA sing N N 256 LYS N H sing N N 257 LYS N H2 sing N N 258 LYS CA C sing N N 259 LYS CA CB sing N N 260 LYS CA HA sing N N 261 LYS C O doub N N 262 LYS C OXT sing N N 263 LYS CB CG sing N N 264 LYS CB HB2 sing N N 265 LYS CB HB3 sing N N 266 LYS CG CD sing N N 267 LYS CG HG2 sing N N 268 LYS CG HG3 sing N N 269 LYS CD CE sing N N 270 LYS CD HD2 sing N N 271 LYS CD HD3 sing N N 272 LYS CE NZ sing N N 273 LYS CE HE2 sing N N 274 LYS CE HE3 sing N N 275 LYS NZ HZ1 sing N N 276 LYS NZ HZ2 sing N N 277 LYS NZ HZ3 sing N N 278 LYS OXT HXT sing N N 279 MET N CA sing N N 280 MET N H sing N N 281 MET N H2 sing N N 282 MET CA C sing N N 283 MET CA CB sing N N 284 MET CA HA sing N N 285 MET C O doub N N 286 MET C OXT sing N N 287 MET CB CG sing N N 288 MET CB HB2 sing N N 289 MET CB HB3 sing N N 290 MET CG SD sing N N 291 MET CG HG2 sing N N 292 MET CG HG3 sing N N 293 MET SD CE sing N N 294 MET CE HE1 sing N N 295 MET CE HE2 sing N N 296 MET CE HE3 sing N N 297 MET OXT HXT sing N N 298 PHE N CA sing N N 299 PHE N H sing N N 300 PHE N H2 sing N N 301 PHE CA C sing N N 302 PHE CA CB sing N N 303 PHE CA HA sing N N 304 PHE C O doub N N 305 PHE C OXT sing N N 306 PHE CB CG sing N N 307 PHE CB HB2 sing N N 308 PHE CB HB3 sing N N 309 PHE CG CD1 doub Y N 310 PHE CG CD2 sing Y N 311 PHE CD1 CE1 sing Y N 312 PHE CD1 HD1 sing N N 313 PHE CD2 CE2 doub Y N 314 PHE CD2 HD2 sing N N 315 PHE CE1 CZ doub Y N 316 PHE CE1 HE1 sing N N 317 PHE CE2 CZ sing Y N 318 PHE CE2 HE2 sing N N 319 PHE CZ HZ sing N N 320 PHE OXT HXT sing N N 321 PRO N CA sing N N 322 PRO N CD sing N N 323 PRO N H sing N N 324 PRO CA C sing N N 325 PRO CA CB sing N N 326 PRO CA HA sing N N 327 PRO C O doub N N 328 PRO C OXT sing N N 329 PRO CB CG sing N N 330 PRO CB HB2 sing N N 331 PRO CB HB3 sing N N 332 PRO CG CD sing N N 333 PRO CG HG2 sing N N 334 PRO CG HG3 sing N N 335 PRO CD HD2 sing N N 336 PRO CD HD3 sing N N 337 PRO OXT HXT sing N N 338 SER N CA sing N N 339 SER N H sing N N 340 SER N H2 sing N N 341 SER CA C sing N N 342 SER CA CB sing N N 343 SER CA HA sing N N 344 SER C O doub N N 345 SER C OXT sing N N 346 SER CB OG sing N N 347 SER CB HB2 sing N N 348 SER CB HB3 sing N N 349 SER OG HG sing N N 350 SER OXT HXT sing N N 351 THR N CA sing N N 352 THR N H sing N N 353 THR N H2 sing N N 354 THR CA C sing N N 355 THR CA CB sing N N 356 THR CA HA sing N N 357 THR C O doub N N 358 THR C OXT sing N N 359 THR CB OG1 sing N N 360 THR CB CG2 sing N N 361 THR CB HB sing N N 362 THR OG1 HG1 sing N N 363 THR CG2 HG21 sing N N 364 THR CG2 HG22 sing N N 365 THR CG2 HG23 sing N N 366 THR OXT HXT sing N N 367 TYR N CA sing N N 368 TYR N H sing N N 369 TYR N H2 sing N N 370 TYR CA C sing N N 371 TYR CA CB sing N N 372 TYR CA HA sing N N 373 TYR C O doub N N 374 TYR C OXT sing N N 375 TYR CB CG sing N N 376 TYR CB HB2 sing N N 377 TYR CB HB3 sing N N 378 TYR CG CD1 doub Y N 379 TYR CG CD2 sing Y N 380 TYR CD1 CE1 sing Y N 381 TYR CD1 HD1 sing N N 382 TYR CD2 CE2 doub Y N 383 TYR CD2 HD2 sing N N 384 TYR CE1 CZ doub Y N 385 TYR CE1 HE1 sing N N 386 TYR CE2 CZ sing Y N 387 TYR CE2 HE2 sing N N 388 TYR CZ OH sing N N 389 TYR OH HH sing N N 390 TYR OXT HXT sing N N 391 VAL N CA sing N N 392 VAL N H sing N N 393 VAL N H2 sing N N 394 VAL CA C sing N N 395 VAL CA CB sing N N 396 VAL CA HA sing N N 397 VAL C O doub N N 398 VAL C OXT sing N N 399 VAL CB CG1 sing N N 400 VAL CB CG2 sing N N 401 VAL CB HB sing N N 402 VAL CG1 HG11 sing N N 403 VAL CG1 HG12 sing N N 404 VAL CG1 HG13 sing N N 405 VAL CG2 HG21 sing N N 406 VAL CG2 HG22 sing N N 407 VAL CG2 HG23 sing N N 408 VAL OXT HXT sing N N 409 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ACTINONIN BB2 3 'ZINC ION' ZN 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3M6O _pdbx_initial_refinement_model.details 'PDB entry 3M6O' #