data_3MBZ # _entry.id 3MBZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3MBZ RCSB RCSB058360 WWPDB D_1000058360 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3G4P 'Native OXA-24' unspecified PDB 3FV7 'OXA-24 complex with SA-4-44' unspecified PDB 3FYZ 'OXA-24 complex with SA-4-17 soaked for 5min at 3mM' unspecified PDB 3FZC 'OXA-24 complex with SA-3-53' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MBZ _pdbx_database_status.recvd_initial_deposition_date 2010-03-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sampson, J.' 1 'van den Akker, F.' 2 # _citation.id primary _citation.title ;Design, synthesis, and crystal structures of 6-alkylidene-2'-substituted penicillanic acid sulfones as potent inhibitors of Acinetobacter baumannii OXA-24 carbapenemase ; _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 132 _citation.page_first 13320 _citation.page_last 13331 _citation.year 2010 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20822105 _citation.pdbx_database_id_DOI 10.1021/ja104092z # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bou, G.' 1 primary 'Santillana, E.' 2 primary 'Sheri, A.' 3 primary 'Beceiro, A.' 4 primary 'Sampson, J.M.' 5 primary 'Kalp, M.' 6 primary 'Bethel, C.R.' 7 primary 'Distler, A.M.' 8 primary 'Drawz, S.M.' 9 primary 'Pagadala, S.R.' 10 primary 'van den Akker, F.' 11 primary 'Bonomo, R.A.' 12 primary 'Romero, A.' 13 primary 'Buynak, J.D.' 14 # _cell.entry_id 3MBZ _cell.length_a 103.083 _cell.length_b 103.083 _cell.length_c 85.802 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MBZ _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Betalactamase OXA24' 27586.660 1 3.5.2.6 ? 'UNP residues 32-275' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn '(2S,3R)-2-[(7-aminocarbonyl-2-methanoyl-indolizin-3-yl)amino]-4-aminocarbonyloxy-3-methyl-3-sulfino-butanoic acid' 426.401 1 ? ? ? ? 4 water nat water 18.015 105 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;OXA-24 beta-lactamase, Carbapenem-hydrolyzing oxacillinase, Class D beta-lactamase OXA-40, OXA-24 class D beta-lactamase, Beta-lactamase, Beta-lactamase OXA-33, Carbapenem-hydrolyzing beta-lactamase OXA-40, Oxa40 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;HISSQQHEKAIKSYFDEAQTQGVIIIKEGKNLSTYGNALARANKEYVPASTF(KCX)MLNALIGLENHKATTNEIFKWDG KKRTYPMWEKDMTLGEAMALSAVPVYQELARRTGLELMQKEVKRVNFGNTNIGTQVDNFWLVGPLKITPVQEVNFADDLA HNRLPFKLETQEEVKKMLLIKEVNGSKIYAKSGWGMGVTPQVGWLTGWVEQANGKKIPFSLNLEMKEGMSGSIRNEITYK SLENLGII ; _entity_poly.pdbx_seq_one_letter_code_can ;HISSQQHEKAIKSYFDEAQTQGVIIIKEGKNLSTYGNALARANKEYVPASTFKMLNALIGLENHKATTNEIFKWDGKKRT YPMWEKDMTLGEAMALSAVPVYQELARRTGLELMQKEVKRVNFGNTNIGTQVDNFWLVGPLKITPVQEVNFADDLAHNRL PFKLETQEEVKKMLLIKEVNGSKIYAKSGWGMGVTPQVGWLTGWVEQANGKKIPFSLNLEMKEGMSGSIRNEITYKSLEN LGII ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 ILE n 1 3 SER n 1 4 SER n 1 5 GLN n 1 6 GLN n 1 7 HIS n 1 8 GLU n 1 9 LYS n 1 10 ALA n 1 11 ILE n 1 12 LYS n 1 13 SER n 1 14 TYR n 1 15 PHE n 1 16 ASP n 1 17 GLU n 1 18 ALA n 1 19 GLN n 1 20 THR n 1 21 GLN n 1 22 GLY n 1 23 VAL n 1 24 ILE n 1 25 ILE n 1 26 ILE n 1 27 LYS n 1 28 GLU n 1 29 GLY n 1 30 LYS n 1 31 ASN n 1 32 LEU n 1 33 SER n 1 34 THR n 1 35 TYR n 1 36 GLY n 1 37 ASN n 1 38 ALA n 1 39 LEU n 1 40 ALA n 1 41 ARG n 1 42 ALA n 1 43 ASN n 1 44 LYS n 1 45 GLU n 1 46 TYR n 1 47 VAL n 1 48 PRO n 1 49 ALA n 1 50 SER n 1 51 THR n 1 52 PHE n 1 53 KCX n 1 54 MET n 1 55 LEU n 1 56 ASN n 1 57 ALA n 1 58 LEU n 1 59 ILE n 1 60 GLY n 1 61 LEU n 1 62 GLU n 1 63 ASN n 1 64 HIS n 1 65 LYS n 1 66 ALA n 1 67 THR n 1 68 THR n 1 69 ASN n 1 70 GLU n 1 71 ILE n 1 72 PHE n 1 73 LYS n 1 74 TRP n 1 75 ASP n 1 76 GLY n 1 77 LYS n 1 78 LYS n 1 79 ARG n 1 80 THR n 1 81 TYR n 1 82 PRO n 1 83 MET n 1 84 TRP n 1 85 GLU n 1 86 LYS n 1 87 ASP n 1 88 MET n 1 89 THR n 1 90 LEU n 1 91 GLY n 1 92 GLU n 1 93 ALA n 1 94 MET n 1 95 ALA n 1 96 LEU n 1 97 SER n 1 98 ALA n 1 99 VAL n 1 100 PRO n 1 101 VAL n 1 102 TYR n 1 103 GLN n 1 104 GLU n 1 105 LEU n 1 106 ALA n 1 107 ARG n 1 108 ARG n 1 109 THR n 1 110 GLY n 1 111 LEU n 1 112 GLU n 1 113 LEU n 1 114 MET n 1 115 GLN n 1 116 LYS n 1 117 GLU n 1 118 VAL n 1 119 LYS n 1 120 ARG n 1 121 VAL n 1 122 ASN n 1 123 PHE n 1 124 GLY n 1 125 ASN n 1 126 THR n 1 127 ASN n 1 128 ILE n 1 129 GLY n 1 130 THR n 1 131 GLN n 1 132 VAL n 1 133 ASP n 1 134 ASN n 1 135 PHE n 1 136 TRP n 1 137 LEU n 1 138 VAL n 1 139 GLY n 1 140 PRO n 1 141 LEU n 1 142 LYS n 1 143 ILE n 1 144 THR n 1 145 PRO n 1 146 VAL n 1 147 GLN n 1 148 GLU n 1 149 VAL n 1 150 ASN n 1 151 PHE n 1 152 ALA n 1 153 ASP n 1 154 ASP n 1 155 LEU n 1 156 ALA n 1 157 HIS n 1 158 ASN n 1 159 ARG n 1 160 LEU n 1 161 PRO n 1 162 PHE n 1 163 LYS n 1 164 LEU n 1 165 GLU n 1 166 THR n 1 167 GLN n 1 168 GLU n 1 169 GLU n 1 170 VAL n 1 171 LYS n 1 172 LYS n 1 173 MET n 1 174 LEU n 1 175 LEU n 1 176 ILE n 1 177 LYS n 1 178 GLU n 1 179 VAL n 1 180 ASN n 1 181 GLY n 1 182 SER n 1 183 LYS n 1 184 ILE n 1 185 TYR n 1 186 ALA n 1 187 LYS n 1 188 SER n 1 189 GLY n 1 190 TRP n 1 191 GLY n 1 192 MET n 1 193 GLY n 1 194 VAL n 1 195 THR n 1 196 PRO n 1 197 GLN n 1 198 VAL n 1 199 GLY n 1 200 TRP n 1 201 LEU n 1 202 THR n 1 203 GLY n 1 204 TRP n 1 205 VAL n 1 206 GLU n 1 207 GLN n 1 208 ALA n 1 209 ASN n 1 210 GLY n 1 211 LYS n 1 212 LYS n 1 213 ILE n 1 214 PRO n 1 215 PHE n 1 216 SER n 1 217 LEU n 1 218 ASN n 1 219 LEU n 1 220 GLU n 1 221 MET n 1 222 LYS n 1 223 GLU n 1 224 GLY n 1 225 MET n 1 226 SER n 1 227 GLY n 1 228 SER n 1 229 ILE n 1 230 ARG n 1 231 ASN n 1 232 GLU n 1 233 ILE n 1 234 THR n 1 235 TYR n 1 236 LYS n 1 237 SER n 1 238 LEU n 1 239 GLU n 1 240 ASN n 1 241 LEU n 1 242 GLY n 1 243 ILE n 1 244 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'bla-OXA-40, blaOXA-24, blaOXA-33, blaOXA-40, oxa-24, oxa40' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Acinetobacter baumannii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 470 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX-6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8RLA6_ACIBA _struct_ref.pdbx_db_accession Q8RLA6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HISSQQHEKAIKSYFDEAQTQGVIIIKEGKNLSTYGNALARANKEYVPASTFKMLNALIGLENHKATTNEIFKWDGKKRT YPMWEKDMTLGEAMALSAVPVYQELARRTGLELMQKEVKRVNFGNTNIGTQVDNFWLVGPLKITPVQEVNFADDLAHNRL PFKLETQEEVKKMLLIKEVNGSKIYAKSGWGMGVTPQVGWLTGWVEQANGKKIPFSLNLEMKEGMSGSIRNEITYKSLEN LGII ; _struct_ref.pdbx_align_begin 32 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3MBZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 244 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8RLA6 _struct_ref_seq.db_align_beg 32 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 275 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 32 _struct_ref_seq.pdbx_auth_seq_align_end 275 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KCX 'L-peptide linking' n 'LYSINE NZ-CARBOXYLIC ACID' ? 'C7 H14 N2 O4' 190.197 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MXC non-polymer . '(2S,3R)-2-[(7-aminocarbonyl-2-methanoyl-indolizin-3-yl)amino]-4-aminocarbonyloxy-3-methyl-3-sulfino-butanoic acid' ? 'C16 H18 N4 O8 S' 426.401 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MBZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.13 _exptl_crystal.density_percent_sol 70.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '2M (NH3)2SO4, 0.1M Tris pH 8.5, room temperature, VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-02-28 _diffrn_detector.details 'vertically focusing mirror and a horizontally focusing monochromator' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'vertically focusing mirror and a horizontally focusing monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.29 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.29 # _reflns.entry_id 3MBZ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.6 _reflns.number_obs 13786 _reflns.number_all 14760 _reflns.percent_possible_obs 93.4 _reflns.pdbx_Rmerge_I_obs 0.110 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 59.2 _reflns_shell.Rmerge_I_obs 0.301 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1434 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3MBZ _refine.ls_number_reflns_obs 13058 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.60 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 93.53 _refine.ls_R_factor_obs 0.17566 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17380 _refine.ls_R_factor_R_free 0.21116 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 692 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.B_iso_mean 27.762 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.315 _refine.pdbx_overall_ESU_R_Free 0.229 _refine.overall_SU_ML 0.146 _refine.overall_SU_B 6.906 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1939 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 105 _refine_hist.number_atoms_total 2078 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 32.60 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 2034 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.390 1.974 ? 2749 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.045 5.000 ? 249 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.923 25.444 ? 90 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.242 15.000 ? 382 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.711 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.087 0.200 ? 298 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 1509 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.497 1.500 ? 1223 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.902 2.000 ? 1975 'X-RAY DIFFRACTION' ? r_scbond_it 4.330 3.000 ? 811 'X-RAY DIFFRACTION' ? r_scangle_it 7.146 4.500 ? 771 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.602 _refine_ls_shell.d_res_low 2.670 _refine_ls_shell.number_reflns_R_work 567 _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.percent_reflns_obs 56.81 _refine_ls_shell.R_factor_R_free 0.315 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 849 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3MBZ _struct.title 'OXA-24 beta-lactamase complex soaked with 10mM SA4-17 inhibitor for 15min' _struct.pdbx_descriptor 'Betalactamase OXA24 (E.C.3.5.2.6)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MBZ _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'beta-lactamase, beta-lactamase inhibitor, Hydrolase, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 3 ? ALA A 18 ? SER A 34 ALA A 49 1 ? 16 HELX_P HELX_P2 2 ALA A 38 ? LYS A 44 ? ALA A 69 LYS A 75 5 ? 7 HELX_P HELX_P3 3 PRO A 48 ? THR A 51 ? PRO A 79 THR A 82 5 ? 4 HELX_P HELX_P4 4 PHE A 52 ? ASN A 63 ? PHE A 83 ASN A 94 1 ? 12 HELX_P HELX_P5 5 TYR A 81 ? GLU A 85 ? TYR A 112 GLU A 116 5 ? 5 HELX_P HELX_P6 6 THR A 89 ? LEU A 96 ? THR A 120 LEU A 127 1 ? 8 HELX_P HELX_P7 7 ALA A 98 ? GLY A 110 ? ALA A 129 GLY A 141 1 ? 13 HELX_P HELX_P8 8 GLY A 110 ? ASN A 122 ? GLY A 141 ASN A 153 1 ? 13 HELX_P HELX_P9 9 ASN A 134 ? GLY A 139 ? ASN A 165 GLY A 170 1 ? 6 HELX_P HELX_P10 10 THR A 144 ? HIS A 157 ? THR A 175 HIS A 188 1 ? 14 HELX_P HELX_P11 11 LYS A 163 ? LYS A 172 ? LYS A 194 LYS A 203 1 ? 10 HELX_P HELX_P12 12 SER A 228 ? LEU A 241 ? SER A 259 LEU A 272 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A KCX 53 N ? ? ? 1_555 A PHE 52 C ? ? A KCX 84 A PHE 83 1_555 ? ? ? ? ? ? ? 1.337 ? covale2 covale ? ? A KCX 53 C ? ? ? 1_555 A MET 54 N ? ? A KCX 84 A MET 85 1_555 ? ? ? ? ? ? ? 1.337 ? covale3 covale ? ? C MXC . C10 ? ? ? 1_555 A SER 50 OG ? ? A MXC 276 A SER 81 1_555 ? ? ? ? ? ? ? 1.339 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 139 A . ? GLY 170 A PRO 140 A ? PRO 171 A 1 8.54 2 THR 195 A . ? THR 226 A PRO 196 A ? PRO 227 A 1 -6.49 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 31 ? GLY A 36 ? ASN A 62 GLY A 67 A 2 GLY A 22 ? GLU A 28 ? GLY A 53 GLU A 59 A 3 LYS A 212 ? MET A 221 ? LYS A 243 MET A 252 A 4 GLN A 197 ? GLU A 206 ? GLN A 228 GLU A 237 A 5 SER A 182 ? GLY A 191 ? SER A 213 GLY A 222 A 6 LEU A 175 ? VAL A 179 ? LEU A 206 VAL A 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 33 ? O SER A 64 N ILE A 26 ? N ILE A 57 A 2 3 N VAL A 23 ? N VAL A 54 O ASN A 218 ? O ASN A 249 A 3 4 O LEU A 217 ? O LEU A 248 N LEU A 201 ? N LEU A 232 A 4 5 O THR A 202 ? O THR A 233 N LYS A 187 ? N LYS A 218 A 5 6 O SER A 182 ? O SER A 213 N VAL A 179 ? N VAL A 210 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 A 1' AC2 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE MXC A 276' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLY A 110 ? GLY A 141 . ? 1_555 ? 2 AC1 4 LEU A 111 ? LEU A 142 . ? 1_555 ? 3 AC1 4 GLU A 112 ? GLU A 143 . ? 1_555 ? 4 AC1 4 HOH D . ? HOH A 300 . ? 1_555 ? 5 AC2 13 ALA A 49 ? ALA A 80 . ? 1_555 ? 6 AC2 13 SER A 50 ? SER A 81 . ? 1_555 ? 7 AC2 13 KCX A 53 ? KCX A 84 . ? 1_555 ? 8 AC2 13 THR A 80 ? THR A 111 . ? 1_555 ? 9 AC2 13 TYR A 81 ? TYR A 112 . ? 1_555 ? 10 AC2 13 ALA A 95 ? ALA A 126 . ? 1_555 ? 11 AC2 13 SER A 97 ? SER A 128 . ? 1_555 ? 12 AC2 13 VAL A 99 ? VAL A 130 . ? 1_555 ? 13 AC2 13 LEU A 137 ? LEU A 168 . ? 1_555 ? 14 AC2 13 SER A 188 ? SER A 219 . ? 1_555 ? 15 AC2 13 GLY A 189 ? GLY A 220 . ? 1_555 ? 16 AC2 13 TRP A 190 ? TRP A 221 . ? 1_555 ? 17 AC2 13 ARG A 230 ? ARG A 261 . ? 1_555 ? # _database_PDB_matrix.entry_id 3MBZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MBZ _atom_sites.fract_transf_matrix[1][1] 0.009701 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011655 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 32 32 HIS HIS A . n A 1 2 ILE 2 33 33 ILE ILE A . n A 1 3 SER 3 34 34 SER SER A . n A 1 4 SER 4 35 35 SER SER A . n A 1 5 GLN 5 36 36 GLN GLN A . n A 1 6 GLN 6 37 37 GLN GLN A . n A 1 7 HIS 7 38 38 HIS HIS A . n A 1 8 GLU 8 39 39 GLU GLU A . n A 1 9 LYS 9 40 40 LYS LYS A . n A 1 10 ALA 10 41 41 ALA ALA A . n A 1 11 ILE 11 42 42 ILE ILE A . n A 1 12 LYS 12 43 43 LYS LYS A . n A 1 13 SER 13 44 44 SER SER A . n A 1 14 TYR 14 45 45 TYR TYR A . n A 1 15 PHE 15 46 46 PHE PHE A . n A 1 16 ASP 16 47 47 ASP ASP A . n A 1 17 GLU 17 48 48 GLU GLU A . n A 1 18 ALA 18 49 49 ALA ALA A . n A 1 19 GLN 19 50 50 GLN GLN A . n A 1 20 THR 20 51 51 THR THR A . n A 1 21 GLN 21 52 52 GLN GLN A . n A 1 22 GLY 22 53 53 GLY GLY A . n A 1 23 VAL 23 54 54 VAL VAL A . n A 1 24 ILE 24 55 55 ILE ILE A . n A 1 25 ILE 25 56 56 ILE ILE A . n A 1 26 ILE 26 57 57 ILE ILE A . n A 1 27 LYS 27 58 58 LYS LYS A . n A 1 28 GLU 28 59 59 GLU GLU A . n A 1 29 GLY 29 60 60 GLY GLY A . n A 1 30 LYS 30 61 61 LYS LYS A . n A 1 31 ASN 31 62 62 ASN ASN A . n A 1 32 LEU 32 63 63 LEU LEU A . n A 1 33 SER 33 64 64 SER SER A . n A 1 34 THR 34 65 65 THR THR A . n A 1 35 TYR 35 66 66 TYR TYR A . n A 1 36 GLY 36 67 67 GLY GLY A . n A 1 37 ASN 37 68 68 ASN ASN A . n A 1 38 ALA 38 69 69 ALA ALA A . n A 1 39 LEU 39 70 70 LEU LEU A . n A 1 40 ALA 40 71 71 ALA ALA A . n A 1 41 ARG 41 72 72 ARG ARG A . n A 1 42 ALA 42 73 73 ALA ALA A . n A 1 43 ASN 43 74 74 ASN ASN A . n A 1 44 LYS 44 75 75 LYS LYS A . n A 1 45 GLU 45 76 76 GLU GLU A . n A 1 46 TYR 46 77 77 TYR TYR A . n A 1 47 VAL 47 78 78 VAL VAL A . n A 1 48 PRO 48 79 79 PRO PRO A . n A 1 49 ALA 49 80 80 ALA ALA A . n A 1 50 SER 50 81 81 SER SER A . n A 1 51 THR 51 82 82 THR THR A . n A 1 52 PHE 52 83 83 PHE PHE A . n A 1 53 KCX 53 84 84 KCX KCX A . n A 1 54 MET 54 85 85 MET MET A . n A 1 55 LEU 55 86 86 LEU LEU A . n A 1 56 ASN 56 87 87 ASN ASN A . n A 1 57 ALA 57 88 88 ALA ALA A . n A 1 58 LEU 58 89 89 LEU LEU A . n A 1 59 ILE 59 90 90 ILE ILE A . n A 1 60 GLY 60 91 91 GLY GLY A . n A 1 61 LEU 61 92 92 LEU LEU A . n A 1 62 GLU 62 93 93 GLU GLU A . n A 1 63 ASN 63 94 94 ASN ASN A . n A 1 64 HIS 64 95 95 HIS HIS A . n A 1 65 LYS 65 96 96 LYS LYS A . n A 1 66 ALA 66 97 97 ALA ALA A . n A 1 67 THR 67 98 98 THR THR A . n A 1 68 THR 68 99 99 THR THR A . n A 1 69 ASN 69 100 100 ASN ASN A . n A 1 70 GLU 70 101 101 GLU GLU A . n A 1 71 ILE 71 102 102 ILE ILE A . n A 1 72 PHE 72 103 103 PHE PHE A . n A 1 73 LYS 73 104 104 LYS LYS A . n A 1 74 TRP 74 105 105 TRP TRP A . n A 1 75 ASP 75 106 106 ASP ASP A . n A 1 76 GLY 76 107 107 GLY GLY A . n A 1 77 LYS 77 108 108 LYS LYS A . n A 1 78 LYS 78 109 109 LYS LYS A . n A 1 79 ARG 79 110 110 ARG ARG A . n A 1 80 THR 80 111 111 THR THR A . n A 1 81 TYR 81 112 112 TYR TYR A . n A 1 82 PRO 82 113 113 PRO PRO A . n A 1 83 MET 83 114 114 MET MET A . n A 1 84 TRP 84 115 115 TRP TRP A . n A 1 85 GLU 85 116 116 GLU GLU A . n A 1 86 LYS 86 117 117 LYS LYS A . n A 1 87 ASP 87 118 118 ASP ASP A . n A 1 88 MET 88 119 119 MET MET A . n A 1 89 THR 89 120 120 THR THR A . n A 1 90 LEU 90 121 121 LEU LEU A . n A 1 91 GLY 91 122 122 GLY GLY A . n A 1 92 GLU 92 123 123 GLU GLU A . n A 1 93 ALA 93 124 124 ALA ALA A . n A 1 94 MET 94 125 125 MET MET A . n A 1 95 ALA 95 126 126 ALA ALA A . n A 1 96 LEU 96 127 127 LEU LEU A . n A 1 97 SER 97 128 128 SER SER A . n A 1 98 ALA 98 129 129 ALA ALA A . n A 1 99 VAL 99 130 130 VAL VAL A . n A 1 100 PRO 100 131 131 PRO PRO A . n A 1 101 VAL 101 132 132 VAL VAL A . n A 1 102 TYR 102 133 133 TYR TYR A . n A 1 103 GLN 103 134 134 GLN GLN A . n A 1 104 GLU 104 135 135 GLU GLU A . n A 1 105 LEU 105 136 136 LEU LEU A . n A 1 106 ALA 106 137 137 ALA ALA A . n A 1 107 ARG 107 138 138 ARG ARG A . n A 1 108 ARG 108 139 139 ARG ARG A . n A 1 109 THR 109 140 140 THR THR A . n A 1 110 GLY 110 141 141 GLY GLY A . n A 1 111 LEU 111 142 142 LEU LEU A . n A 1 112 GLU 112 143 143 GLU GLU A . n A 1 113 LEU 113 144 144 LEU LEU A . n A 1 114 MET 114 145 145 MET MET A . n A 1 115 GLN 115 146 146 GLN GLN A . n A 1 116 LYS 116 147 147 LYS LYS A . n A 1 117 GLU 117 148 148 GLU GLU A . n A 1 118 VAL 118 149 149 VAL VAL A . n A 1 119 LYS 119 150 150 LYS LYS A . n A 1 120 ARG 120 151 151 ARG ARG A . n A 1 121 VAL 121 152 152 VAL VAL A . n A 1 122 ASN 122 153 153 ASN ASN A . n A 1 123 PHE 123 154 154 PHE PHE A . n A 1 124 GLY 124 155 155 GLY GLY A . n A 1 125 ASN 125 156 156 ASN ASN A . n A 1 126 THR 126 157 157 THR THR A . n A 1 127 ASN 127 158 158 ASN ASN A . n A 1 128 ILE 128 159 159 ILE ILE A . n A 1 129 GLY 129 160 160 GLY GLY A . n A 1 130 THR 130 161 161 THR THR A . n A 1 131 GLN 131 162 162 GLN GLN A . n A 1 132 VAL 132 163 163 VAL VAL A . n A 1 133 ASP 133 164 164 ASP ASP A . n A 1 134 ASN 134 165 165 ASN ASN A . n A 1 135 PHE 135 166 166 PHE PHE A . n A 1 136 TRP 136 167 167 TRP TRP A . n A 1 137 LEU 137 168 168 LEU LEU A . n A 1 138 VAL 138 169 169 VAL VAL A . n A 1 139 GLY 139 170 170 GLY GLY A . n A 1 140 PRO 140 171 171 PRO PRO A . n A 1 141 LEU 141 172 172 LEU LEU A . n A 1 142 LYS 142 173 173 LYS LYS A . n A 1 143 ILE 143 174 174 ILE ILE A . n A 1 144 THR 144 175 175 THR THR A . n A 1 145 PRO 145 176 176 PRO PRO A . n A 1 146 VAL 146 177 177 VAL VAL A . n A 1 147 GLN 147 178 178 GLN GLN A . n A 1 148 GLU 148 179 179 GLU GLU A . n A 1 149 VAL 149 180 180 VAL VAL A . n A 1 150 ASN 150 181 181 ASN ASN A . n A 1 151 PHE 151 182 182 PHE PHE A . n A 1 152 ALA 152 183 183 ALA ALA A . n A 1 153 ASP 153 184 184 ASP ASP A . n A 1 154 ASP 154 185 185 ASP ASP A . n A 1 155 LEU 155 186 186 LEU LEU A . n A 1 156 ALA 156 187 187 ALA ALA A . n A 1 157 HIS 157 188 188 HIS HIS A . n A 1 158 ASN 158 189 189 ASN ASN A . n A 1 159 ARG 159 190 190 ARG ARG A . n A 1 160 LEU 160 191 191 LEU LEU A . n A 1 161 PRO 161 192 192 PRO PRO A . n A 1 162 PHE 162 193 193 PHE PHE A . n A 1 163 LYS 163 194 194 LYS LYS A . n A 1 164 LEU 164 195 195 LEU LEU A . n A 1 165 GLU 165 196 196 GLU GLU A . n A 1 166 THR 166 197 197 THR THR A . n A 1 167 GLN 167 198 198 GLN GLN A . n A 1 168 GLU 168 199 199 GLU GLU A . n A 1 169 GLU 169 200 200 GLU GLU A . n A 1 170 VAL 170 201 201 VAL VAL A . n A 1 171 LYS 171 202 202 LYS LYS A . n A 1 172 LYS 172 203 203 LYS LYS A . n A 1 173 MET 173 204 204 MET MET A . n A 1 174 LEU 174 205 205 LEU LEU A . n A 1 175 LEU 175 206 206 LEU LEU A . n A 1 176 ILE 176 207 207 ILE ILE A . n A 1 177 LYS 177 208 208 LYS LYS A . n A 1 178 GLU 178 209 209 GLU GLU A . n A 1 179 VAL 179 210 210 VAL VAL A . n A 1 180 ASN 180 211 211 ASN ASN A . n A 1 181 GLY 181 212 212 GLY GLY A . n A 1 182 SER 182 213 213 SER SER A . n A 1 183 LYS 183 214 214 LYS LYS A . n A 1 184 ILE 184 215 215 ILE ILE A . n A 1 185 TYR 185 216 216 TYR TYR A . n A 1 186 ALA 186 217 217 ALA ALA A . n A 1 187 LYS 187 218 218 LYS LYS A . n A 1 188 SER 188 219 219 SER SER A . n A 1 189 GLY 189 220 220 GLY GLY A . n A 1 190 TRP 190 221 221 TRP TRP A . n A 1 191 GLY 191 222 222 GLY GLY A . n A 1 192 MET 192 223 223 MET MET A . n A 1 193 GLY 193 224 224 GLY GLY A . n A 1 194 VAL 194 225 225 VAL VAL A . n A 1 195 THR 195 226 226 THR THR A . n A 1 196 PRO 196 227 227 PRO PRO A . n A 1 197 GLN 197 228 228 GLN GLN A . n A 1 198 VAL 198 229 229 VAL VAL A . n A 1 199 GLY 199 230 230 GLY GLY A . n A 1 200 TRP 200 231 231 TRP TRP A . n A 1 201 LEU 201 232 232 LEU LEU A . n A 1 202 THR 202 233 233 THR THR A . n A 1 203 GLY 203 234 234 GLY GLY A . n A 1 204 TRP 204 235 235 TRP TRP A . n A 1 205 VAL 205 236 236 VAL VAL A . n A 1 206 GLU 206 237 237 GLU GLU A . n A 1 207 GLN 207 238 238 GLN GLN A . n A 1 208 ALA 208 239 239 ALA ALA A . n A 1 209 ASN 209 240 240 ASN ASN A . n A 1 210 GLY 210 241 241 GLY GLY A . n A 1 211 LYS 211 242 242 LYS LYS A . n A 1 212 LYS 212 243 243 LYS LYS A . n A 1 213 ILE 213 244 244 ILE ILE A . n A 1 214 PRO 214 245 245 PRO PRO A . n A 1 215 PHE 215 246 246 PHE PHE A . n A 1 216 SER 216 247 247 SER SER A . n A 1 217 LEU 217 248 248 LEU LEU A . n A 1 218 ASN 218 249 249 ASN ASN A . n A 1 219 LEU 219 250 250 LEU LEU A . n A 1 220 GLU 220 251 251 GLU GLU A . n A 1 221 MET 221 252 252 MET MET A . n A 1 222 LYS 222 253 253 LYS LYS A . n A 1 223 GLU 223 254 254 GLU GLU A . n A 1 224 GLY 224 255 255 GLY GLY A . n A 1 225 MET 225 256 256 MET MET A . n A 1 226 SER 226 257 257 SER SER A . n A 1 227 GLY 227 258 258 GLY GLY A . n A 1 228 SER 228 259 259 SER SER A . n A 1 229 ILE 229 260 260 ILE ILE A . n A 1 230 ARG 230 261 261 ARG ARG A . n A 1 231 ASN 231 262 262 ASN ASN A . n A 1 232 GLU 232 263 263 GLU GLU A . n A 1 233 ILE 233 264 264 ILE ILE A . n A 1 234 THR 234 265 265 THR THR A . n A 1 235 TYR 235 266 266 TYR TYR A . n A 1 236 LYS 236 267 267 LYS LYS A . n A 1 237 SER 237 268 268 SER SER A . n A 1 238 LEU 238 269 269 LEU LEU A . n A 1 239 GLU 239 270 270 GLU GLU A . n A 1 240 ASN 240 271 271 ASN ASN A . n A 1 241 LEU 241 272 272 LEU LEU A . n A 1 242 GLY 242 273 273 GLY GLY A . n A 1 243 ILE 243 274 274 ILE ILE A . n A 1 244 ILE 244 275 275 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 1 1 SO4 SO4 A . C 3 MXC 1 276 1 MXC MXC A . D 4 HOH 1 2 2 HOH HOH A . D 4 HOH 2 4 4 HOH HOH A . D 4 HOH 3 5 5 HOH HOH A . D 4 HOH 4 6 6 HOH HOH A . D 4 HOH 5 7 7 HOH HOH A . D 4 HOH 6 8 8 HOH HOH A . D 4 HOH 7 9 9 HOH HOH A . D 4 HOH 8 10 10 HOH HOH A . D 4 HOH 9 11 11 HOH HOH A . D 4 HOH 10 12 12 HOH HOH A . D 4 HOH 11 14 14 HOH HOH A . D 4 HOH 12 15 15 HOH HOH A . D 4 HOH 13 16 16 HOH HOH A . D 4 HOH 14 18 18 HOH HOH A . D 4 HOH 15 19 19 HOH HOH A . D 4 HOH 16 20 20 HOH HOH A . D 4 HOH 17 22 22 HOH HOH A . D 4 HOH 18 23 23 HOH HOH A . D 4 HOH 19 24 24 HOH HOH A . D 4 HOH 20 25 25 HOH HOH A . D 4 HOH 21 28 28 HOH HOH A . D 4 HOH 22 29 29 HOH HOH A . D 4 HOH 23 31 31 HOH HOH A . D 4 HOH 24 277 1 HOH HOH A . D 4 HOH 25 278 32 HOH HOH A . D 4 HOH 26 279 33 HOH HOH A . D 4 HOH 27 280 34 HOH HOH A . D 4 HOH 28 281 35 HOH HOH A . D 4 HOH 29 282 38 HOH HOH A . D 4 HOH 30 283 39 HOH HOH A . D 4 HOH 31 284 41 HOH HOH A . D 4 HOH 32 285 42 HOH HOH A . D 4 HOH 33 286 43 HOH HOH A . D 4 HOH 34 287 44 HOH HOH A . D 4 HOH 35 288 45 HOH HOH A . D 4 HOH 36 289 48 HOH HOH A . D 4 HOH 37 290 49 HOH HOH A . D 4 HOH 38 291 50 HOH HOH A . D 4 HOH 39 292 52 HOH HOH A . D 4 HOH 40 293 56 HOH HOH A . D 4 HOH 41 294 58 HOH HOH A . D 4 HOH 42 295 59 HOH HOH A . D 4 HOH 43 296 60 HOH HOH A . D 4 HOH 44 297 61 HOH HOH A . D 4 HOH 45 298 62 HOH HOH A . D 4 HOH 46 299 64 HOH HOH A . D 4 HOH 47 300 65 HOH HOH A . D 4 HOH 48 301 67 HOH HOH A . D 4 HOH 49 302 68 HOH HOH A . D 4 HOH 50 303 69 HOH HOH A . D 4 HOH 51 304 70 HOH HOH A . D 4 HOH 52 305 71 HOH HOH A . D 4 HOH 53 306 72 HOH HOH A . D 4 HOH 54 307 73 HOH HOH A . D 4 HOH 55 308 77 HOH HOH A . D 4 HOH 56 309 78 HOH HOH A . D 4 HOH 57 310 79 HOH HOH A . D 4 HOH 58 311 80 HOH HOH A . D 4 HOH 59 312 81 HOH HOH A . D 4 HOH 60 313 82 HOH HOH A . D 4 HOH 61 314 83 HOH HOH A . D 4 HOH 62 315 84 HOH HOH A . D 4 HOH 63 316 85 HOH HOH A . D 4 HOH 64 317 87 HOH HOH A . D 4 HOH 65 318 88 HOH HOH A . D 4 HOH 66 319 89 HOH HOH A . D 4 HOH 67 320 90 HOH HOH A . D 4 HOH 68 321 91 HOH HOH A . D 4 HOH 69 322 92 HOH HOH A . D 4 HOH 70 323 93 HOH HOH A . D 4 HOH 71 324 94 HOH HOH A . D 4 HOH 72 325 95 HOH HOH A . D 4 HOH 73 326 96 HOH HOH A . D 4 HOH 74 327 97 HOH HOH A . D 4 HOH 75 328 98 HOH HOH A . D 4 HOH 76 329 99 HOH HOH A . D 4 HOH 77 330 101 HOH HOH A . D 4 HOH 78 331 102 HOH HOH A . D 4 HOH 79 332 103 HOH HOH A . D 4 HOH 80 333 104 HOH HOH A . D 4 HOH 81 334 105 HOH HOH A . D 4 HOH 82 335 106 HOH HOH A . D 4 HOH 83 336 107 HOH HOH A . D 4 HOH 84 337 108 HOH HOH A . D 4 HOH 85 338 109 HOH HOH A . D 4 HOH 86 339 110 HOH HOH A . D 4 HOH 87 340 111 HOH HOH A . D 4 HOH 88 341 112 HOH HOH A . D 4 HOH 89 342 115 HOH HOH A . D 4 HOH 90 343 116 HOH HOH A . D 4 HOH 91 344 123 HOH HOH A . D 4 HOH 92 345 124 HOH HOH A . D 4 HOH 93 346 127 HOH HOH A . D 4 HOH 94 347 128 HOH HOH A . D 4 HOH 95 348 138 HOH HOH A . D 4 HOH 96 349 141 HOH HOH A . D 4 HOH 97 350 148 HOH HOH A . D 4 HOH 98 351 151 HOH HOH A . D 4 HOH 99 352 152 HOH HOH A . D 4 HOH 100 353 153 HOH HOH A . D 4 HOH 101 354 155 HOH HOH A . D 4 HOH 102 355 158 HOH HOH A . D 4 HOH 103 356 159 HOH HOH A . D 4 HOH 104 357 173 HOH HOH A . D 4 HOH 105 358 179 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id KCX _pdbx_struct_mod_residue.label_seq_id 53 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id KCX _pdbx_struct_mod_residue.auth_seq_id 84 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details 'LYSINE NZ-CARBOXYLIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-16 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # _software.name REFMAC _software.classification refinement _software.version 5.5.0088 _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 81 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 MXC _pdbx_validate_close_contact.auth_seq_id_2 276 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.93 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 80 ? ? 51.57 -143.07 2 1 ASN A 165 ? ? -150.94 12.21 3 1 ASN A 211 ? ? 39.49 77.34 4 1 ASN A 240 ? ? -68.62 5.87 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 '(2S,3R)-2-[(7-aminocarbonyl-2-methanoyl-indolizin-3-yl)amino]-4-aminocarbonyloxy-3-methyl-3-sulfino-butanoic acid' MXC 4 water HOH #