data_3MO8 # _entry.id 3MO8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MO8 pdb_00003mo8 10.2210/pdb3mo8/pdb RCSB RCSB058792 ? ? WWPDB D_1000058792 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3L42 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3MO8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-04-22 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lam, R.' 1 'Zeng, H.' 2 'Ni, S.' 3 'Bountra, C.' 4 'Weigelt, J.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Bochkarev, A.' 8 'Min, J.' 9 'Wu, H.' 10 'Structural Genomics Consortium (SGC)' 11 # _citation.id primary _citation.title 'Structural and Histone Binding Ability Characterizations of Human PWWP Domains.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 6 _citation.page_first e18919 _citation.page_last e18919 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21720545 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0018919 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wu, H.' 1 ? primary 'Zeng, H.' 2 ? primary 'Lam, R.' 3 ? primary 'Tempel, W.' 4 ? primary 'Amaya, M.F.' 5 ? primary 'Xu, C.' 6 ? primary 'Dombrovski, L.' 7 ? primary 'Qiu, W.' 8 ? primary 'Wang, Y.' 9 ? primary 'Min, J.' 10 ? # _cell.entry_id 3MO8 _cell.length_a 43.086 _cell.length_b 70.605 _cell.length_c 113.539 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MO8 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Peregrin 15076.455 1 ? ? 'UNP residues 1079-1207' ? 2 polymer syn 'Histone H3.2 TRIMETHYLATED H3K36 PEPTIDE' 1356.615 1 ? ? 'UNP residue 31-42' ? 3 water nat water 18.015 107 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Bromodomain and PHD finger-containing protein 1, Protein Br140' 2 'Histone H3/m, Histone H3/o' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GEDSPLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTWQWL PRTKLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRALQHRSKVQGEQS ; ;GEDSPLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTWQWL PRTKLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRALQHRSKVQGEQS ; A ? 2 'polypeptide(L)' no yes 'PATGGV(M3L)KPHRY' PATGGVKKPHRY B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLU n 1 3 ASP n 1 4 SER n 1 5 PRO n 1 6 LEU n 1 7 ASP n 1 8 ALA n 1 9 LEU n 1 10 ASP n 1 11 LEU n 1 12 VAL n 1 13 TRP n 1 14 ALA n 1 15 LYS n 1 16 CYS n 1 17 ARG n 1 18 GLY n 1 19 TYR n 1 20 PRO n 1 21 SER n 1 22 TYR n 1 23 PRO n 1 24 ALA n 1 25 LEU n 1 26 ILE n 1 27 ILE n 1 28 ASP n 1 29 PRO n 1 30 LYS n 1 31 MET n 1 32 PRO n 1 33 ARG n 1 34 GLU n 1 35 GLY n 1 36 MET n 1 37 PHE n 1 38 HIS n 1 39 HIS n 1 40 GLY n 1 41 VAL n 1 42 PRO n 1 43 ILE n 1 44 PRO n 1 45 VAL n 1 46 PRO n 1 47 PRO n 1 48 LEU n 1 49 GLU n 1 50 VAL n 1 51 LEU n 1 52 LYS n 1 53 LEU n 1 54 GLY n 1 55 GLU n 1 56 GLN n 1 57 MET n 1 58 THR n 1 59 GLN n 1 60 GLU n 1 61 ALA n 1 62 ARG n 1 63 GLU n 1 64 HIS n 1 65 LEU n 1 66 TYR n 1 67 LEU n 1 68 VAL n 1 69 LEU n 1 70 PHE n 1 71 PHE n 1 72 ASP n 1 73 ASN n 1 74 LYS n 1 75 ARG n 1 76 THR n 1 77 TRP n 1 78 GLN n 1 79 TRP n 1 80 LEU n 1 81 PRO n 1 82 ARG n 1 83 THR n 1 84 LYS n 1 85 LEU n 1 86 VAL n 1 87 PRO n 1 88 LEU n 1 89 GLY n 1 90 VAL n 1 91 ASN n 1 92 GLN n 1 93 ASP n 1 94 LEU n 1 95 ASP n 1 96 LYS n 1 97 GLU n 1 98 LYS n 1 99 MET n 1 100 LEU n 1 101 GLU n 1 102 GLY n 1 103 ARG n 1 104 LYS n 1 105 SER n 1 106 ASN n 1 107 ILE n 1 108 ARG n 1 109 LYS n 1 110 SER n 1 111 VAL n 1 112 GLN n 1 113 ILE n 1 114 ALA n 1 115 TYR n 1 116 HIS n 1 117 ARG n 1 118 ALA n 1 119 LEU n 1 120 GLN n 1 121 HIS n 1 122 ARG n 1 123 SER n 1 124 LYS n 1 125 VAL n 1 126 GLN n 1 127 GLY n 1 128 GLU n 1 129 GLN n 1 130 SER n 2 1 PRO n 2 2 ALA n 2 3 THR n 2 4 GLY n 2 5 GLY n 2 6 VAL n 2 7 M3L n 2 8 LYS n 2 9 PRO n 2 10 HIS n 2 11 ARG n 2 12 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BR140, BRPF1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-(DE3)-V2R-pRARE2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP BRPF1_HUMAN P55201 1 ;EDSPLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTWQWLP RTKLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRALQHRSKVQGEQS ; 1079 ? 2 UNP H32_HUMAN Q71DI3 2 PATGGVKKPHRY 31 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MO8 A 2 ? 130 ? P55201 1079 ? 1207 ? 1079 1207 2 2 3MO8 B 1 ? 12 ? Q71DI3 31 ? 42 ? 1 12 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3MO8 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P55201 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1078 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M3L 'L-peptide linking' n N-TRIMETHYLLYSINE ? 'C9 H21 N2 O2 1' 189.275 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MO8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas 2.63 _exptl_crystal.density_Matthews 2.63 _exptl_crystal.density_percent_sol 53.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '3.5M sodium formate, 0.1M Tris-HCl pH8.5, H3K36me3 peptide, VAPOR DIFFUSION, SITTING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-02-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Rosenbaum-Rock high-resolution double-crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97935 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97935 # _reflns.entry_id 3MO8 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.69 _reflns.number_obs 19545 _reflns.number_all ? _reflns.percent_possible_obs 99.400 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.100 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.69 1.74 96.70 0.407 ? ? 6.00 ? ? ? ? ? ? 1 1 1.74 1.78 99.70 0.363 ? ? 7.20 ? ? ? ? ? ? 2 1 1.78 1.83 99.80 0.294 ? ? 7.70 ? ? ? ? ? ? 3 1 1.83 1.89 99.90 0.233 ? ? 7.90 ? ? ? ? ? ? 4 1 1.89 1.95 100.00 0.190 ? ? 8.00 ? ? ? ? ? ? 5 1 1.95 2.02 100.00 0.157 ? ? 8.00 ? ? ? ? ? ? 6 1 2.02 2.10 100.00 0.130 ? ? 8.00 ? ? ? ? ? ? 7 1 2.10 2.19 100.00 0.117 ? ? 8.00 ? ? ? ? ? ? 8 1 2.19 2.31 100.00 0.101 ? ? 8.00 ? ? ? ? ? ? 9 1 2.31 2.45 100.00 0.089 ? ? 8.00 ? ? ? ? ? ? 10 1 2.45 2.64 100.00 0.079 ? ? 8.00 ? ? ? ? ? ? 11 1 2.64 2.91 100.00 0.068 ? ? 8.00 ? ? ? ? ? ? 12 1 2.91 3.33 99.50 0.064 ? ? 7.80 ? ? ? ? ? ? 13 1 3.33 4.19 97.50 0.051 ? ? 7.40 ? ? ? ? ? ? 14 1 4.19 50.00 97.30 0.036 ? ? 7.20 ? ? ? ? ? ? 15 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3MO8 _refine.ls_number_reflns_obs 18540 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.78 _refine.ls_d_res_high 1.69 _refine.ls_percent_reflns_obs 98.67 _refine.ls_R_factor_obs 0.19249 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19167 _refine.ls_R_factor_R_free 0.20741 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1005 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.50 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 28.748 _refine.aniso_B[1][1] -0.24 _refine.aniso_B[2][2] 2.40 _refine.aniso_B[3][3] -2.16 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 3L42' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.100 _refine.pdbx_overall_ESU_R_Free 0.093 _refine.overall_SU_ML 0.061 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.050 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1124 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 107 _refine_hist.number_atoms_total 1231 _refine_hist.d_res_high 1.69 _refine_hist.d_res_low 36.78 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 1170 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.214 1.982 ? 1587 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.969 5.000 ? 141 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 27.124 22.500 ? 52 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.057 15.000 ? 205 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.200 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.087 0.200 ? 167 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.022 ? 886 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.770 1.500 ? 703 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.444 2.000 ? 1138 'X-RAY DIFFRACTION' ? r_scbond_it 2.111 3.000 ? 467 'X-RAY DIFFRACTION' ? r_scangle_it 3.504 4.500 ? 447 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.69 _refine_ls_shell.d_res_low 1.735 _refine_ls_shell.number_reflns_R_work 1201 _refine_ls_shell.R_factor_R_work 0.252 _refine_ls_shell.percent_reflns_obs 87.90 _refine_ls_shell.R_factor_R_free 0.277 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 63 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3MO8 _struct.title 'PWWP Domain of Human Bromodomain and PHD finger-containing protein 1 In Complex with Trimethylated H3K36 Peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MO8 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'Peregrin, Protein BR140, histone H3 acetylation, transcription, Structural Genomics Consortium, SGC' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details 'As per the authors the biological assembly is a monomer' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 47 ? ALA A 61 ? PRO A 1124 ALA A 1138 1 ? 15 HELX_P HELX_P2 2 PRO A 81 ? THR A 83 ? PRO A 1158 THR A 1160 5 ? 3 HELX_P HELX_P3 3 ASN A 91 ? LEU A 100 ? ASN A 1168 LEU A 1177 1 ? 10 HELX_P HELX_P4 4 LYS A 104 ? GLY A 127 ? LYS A 1181 GLY A 1204 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B VAL 6 C ? ? ? 1_555 B M3L 7 N ? ? B VAL 6 B M3L 7 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale both ? B M3L 7 C ? ? ? 1_555 B LYS 8 N ? ? B M3L 7 B LYS 8 1_555 ? ? ? ? ? ? ? 1.332 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 77 ? LEU A 80 ? TRP A 1154 LEU A 1157 A 2 TYR A 66 ? PHE A 70 ? TYR A 1143 PHE A 1147 A 3 TYR A 22 ? ILE A 27 ? TYR A 1099 ILE A 1104 A 4 LEU A 11 ? ALA A 14 ? LEU A 1088 ALA A 1091 A 5 LEU A 85 ? PRO A 87 ? LEU A 1162 PRO A 1164 B 1 MET A 36 ? HIS A 38 ? MET A 1113 HIS A 1115 B 2 VAL A 41 ? ILE A 43 ? VAL A 1118 ILE A 1120 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 80 ? O LEU A 1157 N TYR A 66 ? N TYR A 1143 A 2 3 O LEU A 67 ? O LEU A 1144 N ILE A 27 ? N ILE A 1104 A 3 4 O ALA A 24 ? O ALA A 1101 N VAL A 12 ? N VAL A 1089 A 4 5 N TRP A 13 ? N TRP A 1090 O VAL A 86 ? O VAL A 1163 B 1 2 N HIS A 38 ? N HIS A 1115 O VAL A 41 ? O VAL A 1118 # _atom_sites.entry_id 3MO8 _atom_sites.fract_transf_matrix[1][1] 0.023209 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014163 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008808 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1078 1078 GLY GLY A . n A 1 2 GLU 2 1079 1079 GLU GLU A . n A 1 3 ASP 3 1080 1080 ASP ASP A . n A 1 4 SER 4 1081 1081 SER SER A . n A 1 5 PRO 5 1082 1082 PRO PRO A . n A 1 6 LEU 6 1083 1083 LEU LEU A . n A 1 7 ASP 7 1084 1084 ASP ASP A . n A 1 8 ALA 8 1085 1085 ALA ALA A . n A 1 9 LEU 9 1086 1086 LEU LEU A . n A 1 10 ASP 10 1087 1087 ASP ASP A . n A 1 11 LEU 11 1088 1088 LEU LEU A . n A 1 12 VAL 12 1089 1089 VAL VAL A . n A 1 13 TRP 13 1090 1090 TRP TRP A . n A 1 14 ALA 14 1091 1091 ALA ALA A . n A 1 15 LYS 15 1092 1092 LYS LYS A . n A 1 16 CYS 16 1093 1093 CYS CYS A . n A 1 17 ARG 17 1094 1094 ARG ARG A . n A 1 18 GLY 18 1095 1095 GLY GLY A . n A 1 19 TYR 19 1096 1096 TYR TYR A . n A 1 20 PRO 20 1097 1097 PRO PRO A . n A 1 21 SER 21 1098 1098 SER SER A . n A 1 22 TYR 22 1099 1099 TYR TYR A . n A 1 23 PRO 23 1100 1100 PRO PRO A . n A 1 24 ALA 24 1101 1101 ALA ALA A . n A 1 25 LEU 25 1102 1102 LEU LEU A . n A 1 26 ILE 26 1103 1103 ILE ILE A . n A 1 27 ILE 27 1104 1104 ILE ILE A . n A 1 28 ASP 28 1105 1105 ASP ASP A . n A 1 29 PRO 29 1106 1106 PRO PRO A . n A 1 30 LYS 30 1107 1107 LYS LYS A . n A 1 31 MET 31 1108 1108 MET MET A . n A 1 32 PRO 32 1109 1109 PRO PRO A . n A 1 33 ARG 33 1110 1110 ARG ARG A . n A 1 34 GLU 34 1111 1111 GLU GLU A . n A 1 35 GLY 35 1112 1112 GLY GLY A . n A 1 36 MET 36 1113 1113 MET MET A . n A 1 37 PHE 37 1114 1114 PHE PHE A . n A 1 38 HIS 38 1115 1115 HIS HIS A . n A 1 39 HIS 39 1116 1116 HIS HIS A . n A 1 40 GLY 40 1117 1117 GLY GLY A . n A 1 41 VAL 41 1118 1118 VAL VAL A . n A 1 42 PRO 42 1119 1119 PRO PRO A . n A 1 43 ILE 43 1120 1120 ILE ILE A . n A 1 44 PRO 44 1121 1121 PRO PRO A . n A 1 45 VAL 45 1122 1122 VAL VAL A . n A 1 46 PRO 46 1123 1123 PRO PRO A . n A 1 47 PRO 47 1124 1124 PRO PRO A . n A 1 48 LEU 48 1125 1125 LEU LEU A . n A 1 49 GLU 49 1126 1126 GLU GLU A . n A 1 50 VAL 50 1127 1127 VAL VAL A . n A 1 51 LEU 51 1128 1128 LEU LEU A . n A 1 52 LYS 52 1129 1129 LYS LYS A . n A 1 53 LEU 53 1130 1130 LEU LEU A . n A 1 54 GLY 54 1131 1131 GLY GLY A . n A 1 55 GLU 55 1132 1132 GLU GLU A . n A 1 56 GLN 56 1133 1133 GLN GLN A . n A 1 57 MET 57 1134 1134 MET MET A . n A 1 58 THR 58 1135 1135 THR THR A . n A 1 59 GLN 59 1136 1136 GLN GLN A . n A 1 60 GLU 60 1137 1137 GLU GLU A . n A 1 61 ALA 61 1138 1138 ALA ALA A . n A 1 62 ARG 62 1139 1139 ARG ARG A . n A 1 63 GLU 63 1140 1140 GLU GLU A . n A 1 64 HIS 64 1141 1141 HIS HIS A . n A 1 65 LEU 65 1142 1142 LEU LEU A . n A 1 66 TYR 66 1143 1143 TYR TYR A . n A 1 67 LEU 67 1144 1144 LEU LEU A . n A 1 68 VAL 68 1145 1145 VAL VAL A . n A 1 69 LEU 69 1146 1146 LEU LEU A . n A 1 70 PHE 70 1147 1147 PHE PHE A . n A 1 71 PHE 71 1148 1148 PHE PHE A . n A 1 72 ASP 72 1149 1149 ASP ASP A . n A 1 73 ASN 73 1150 1150 ASN ASN A . n A 1 74 LYS 74 1151 1151 LYS LYS A . n A 1 75 ARG 75 1152 1152 ARG ARG A . n A 1 76 THR 76 1153 1153 THR THR A . n A 1 77 TRP 77 1154 1154 TRP TRP A . n A 1 78 GLN 78 1155 1155 GLN GLN A . n A 1 79 TRP 79 1156 1156 TRP TRP A . n A 1 80 LEU 80 1157 1157 LEU LEU A . n A 1 81 PRO 81 1158 1158 PRO PRO A . n A 1 82 ARG 82 1159 1159 ARG ARG A . n A 1 83 THR 83 1160 1160 THR THR A . n A 1 84 LYS 84 1161 1161 LYS LYS A . n A 1 85 LEU 85 1162 1162 LEU LEU A . n A 1 86 VAL 86 1163 1163 VAL VAL A . n A 1 87 PRO 87 1164 1164 PRO PRO A . n A 1 88 LEU 88 1165 1165 LEU LEU A . n A 1 89 GLY 89 1166 1166 GLY GLY A . n A 1 90 VAL 90 1167 1167 VAL VAL A . n A 1 91 ASN 91 1168 1168 ASN ASN A . n A 1 92 GLN 92 1169 1169 GLN GLN A . n A 1 93 ASP 93 1170 1170 ASP ASP A . n A 1 94 LEU 94 1171 1171 LEU LEU A . n A 1 95 ASP 95 1172 1172 ASP ASP A . n A 1 96 LYS 96 1173 1173 LYS LYS A . n A 1 97 GLU 97 1174 1174 GLU GLU A . n A 1 98 LYS 98 1175 1175 LYS LYS A . n A 1 99 MET 99 1176 1176 MET MET A . n A 1 100 LEU 100 1177 1177 LEU LEU A . n A 1 101 GLU 101 1178 1178 GLU GLU A . n A 1 102 GLY 102 1179 1179 GLY GLY A . n A 1 103 ARG 103 1180 1180 ARG ARG A . n A 1 104 LYS 104 1181 1181 LYS LYS A . n A 1 105 SER 105 1182 1182 SER SER A . n A 1 106 ASN 106 1183 1183 ASN ASN A . n A 1 107 ILE 107 1184 1184 ILE ILE A . n A 1 108 ARG 108 1185 1185 ARG ARG A . n A 1 109 LYS 109 1186 1186 LYS LYS A . n A 1 110 SER 110 1187 1187 SER SER A . n A 1 111 VAL 111 1188 1188 VAL VAL A . n A 1 112 GLN 112 1189 1189 GLN GLN A . n A 1 113 ILE 113 1190 1190 ILE ILE A . n A 1 114 ALA 114 1191 1191 ALA ALA A . n A 1 115 TYR 115 1192 1192 TYR TYR A . n A 1 116 HIS 116 1193 1193 HIS HIS A . n A 1 117 ARG 117 1194 1194 ARG ARG A . n A 1 118 ALA 118 1195 1195 ALA ALA A . n A 1 119 LEU 119 1196 1196 LEU LEU A . n A 1 120 GLN 120 1197 1197 GLN GLN A . n A 1 121 HIS 121 1198 1198 HIS HIS A . n A 1 122 ARG 122 1199 1199 ARG ARG A . n A 1 123 SER 123 1200 1200 SER SER A . n A 1 124 LYS 124 1201 1201 LYS LYS A . n A 1 125 VAL 125 1202 1202 VAL VAL A . n A 1 126 GLN 126 1203 1203 GLN GLN A . n A 1 127 GLY 127 1204 1204 GLY GLY A . n A 1 128 GLU 128 1205 ? ? ? A . n A 1 129 GLN 129 1206 ? ? ? A . n A 1 130 SER 130 1207 ? ? ? A . n B 2 1 PRO 1 1 1 PRO PRO B . n B 2 2 ALA 2 2 2 ALA ALA B . n B 2 3 THR 3 3 3 THR THR B . n B 2 4 GLY 4 4 4 GLY GLY B . n B 2 5 GLY 5 5 5 GLY GLY B . n B 2 6 VAL 6 6 6 VAL VAL B . n B 2 7 M3L 7 7 7 M3L M3L B . n B 2 8 LYS 8 8 8 LYS LYS B . n B 2 9 PRO 9 9 9 PRO PRO B . n B 2 10 HIS 10 10 10 HIS HIS B . n B 2 11 ARG 11 11 11 ARG ARG B . n B 2 12 TYR 12 12 12 TYR TYR B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 7 7 HOH HOH A . C 3 HOH 7 8 8 HOH HOH A . C 3 HOH 8 9 9 HOH HOH A . C 3 HOH 9 10 10 HOH HOH A . C 3 HOH 10 11 11 HOH HOH A . C 3 HOH 11 12 12 HOH HOH A . C 3 HOH 12 13 13 HOH HOH A . C 3 HOH 13 14 14 HOH HOH A . C 3 HOH 14 15 15 HOH HOH A . C 3 HOH 15 16 16 HOH HOH A . C 3 HOH 16 17 17 HOH HOH A . C 3 HOH 17 18 18 HOH HOH A . C 3 HOH 18 19 19 HOH HOH A . C 3 HOH 19 20 20 HOH HOH A . C 3 HOH 20 22 22 HOH HOH A . C 3 HOH 21 23 23 HOH HOH A . C 3 HOH 22 24 24 HOH HOH A . C 3 HOH 23 25 25 HOH HOH A . C 3 HOH 24 26 26 HOH HOH A . C 3 HOH 25 27 27 HOH HOH A . C 3 HOH 26 28 28 HOH HOH A . C 3 HOH 27 29 29 HOH HOH A . C 3 HOH 28 30 30 HOH HOH A . C 3 HOH 29 31 31 HOH HOH A . C 3 HOH 30 33 33 HOH HOH A . C 3 HOH 31 34 34 HOH HOH A . C 3 HOH 32 35 35 HOH HOH A . C 3 HOH 33 36 36 HOH HOH A . C 3 HOH 34 37 37 HOH HOH A . C 3 HOH 35 38 38 HOH HOH A . C 3 HOH 36 39 39 HOH HOH A . C 3 HOH 37 40 40 HOH HOH A . C 3 HOH 38 42 42 HOH HOH A . C 3 HOH 39 43 43 HOH HOH A . C 3 HOH 40 44 44 HOH HOH A . C 3 HOH 41 45 45 HOH HOH A . C 3 HOH 42 46 46 HOH HOH A . C 3 HOH 43 47 47 HOH HOH A . C 3 HOH 44 48 48 HOH HOH A . C 3 HOH 45 49 49 HOH HOH A . C 3 HOH 46 50 50 HOH HOH A . C 3 HOH 47 51 51 HOH HOH A . C 3 HOH 48 52 52 HOH HOH A . C 3 HOH 49 53 53 HOH HOH A . C 3 HOH 50 54 54 HOH HOH A . C 3 HOH 51 55 55 HOH HOH A . C 3 HOH 52 56 56 HOH HOH A . C 3 HOH 53 57 57 HOH HOH A . C 3 HOH 54 58 58 HOH HOH A . C 3 HOH 55 60 60 HOH HOH A . C 3 HOH 56 62 62 HOH HOH A . C 3 HOH 57 63 63 HOH HOH A . C 3 HOH 58 64 64 HOH HOH A . C 3 HOH 59 65 65 HOH HOH A . C 3 HOH 60 66 66 HOH HOH A . C 3 HOH 61 67 67 HOH HOH A . C 3 HOH 62 68 68 HOH HOH A . C 3 HOH 63 69 69 HOH HOH A . C 3 HOH 64 70 70 HOH HOH A . C 3 HOH 65 71 71 HOH HOH A . C 3 HOH 66 72 72 HOH HOH A . C 3 HOH 67 73 73 HOH HOH A . C 3 HOH 68 74 74 HOH HOH A . C 3 HOH 69 76 76 HOH HOH A . C 3 HOH 70 77 77 HOH HOH A . C 3 HOH 71 78 78 HOH HOH A . C 3 HOH 72 80 80 HOH HOH A . C 3 HOH 73 81 81 HOH HOH A . C 3 HOH 74 82 82 HOH HOH A . C 3 HOH 75 83 83 HOH HOH A . C 3 HOH 76 84 84 HOH HOH A . C 3 HOH 77 85 85 HOH HOH A . C 3 HOH 78 86 86 HOH HOH A . C 3 HOH 79 87 87 HOH HOH A . C 3 HOH 80 88 88 HOH HOH A . C 3 HOH 81 89 89 HOH HOH A . C 3 HOH 82 90 90 HOH HOH A . C 3 HOH 83 91 91 HOH HOH A . C 3 HOH 84 92 92 HOH HOH A . C 3 HOH 85 93 93 HOH HOH A . C 3 HOH 86 94 94 HOH HOH A . C 3 HOH 87 95 95 HOH HOH A . C 3 HOH 88 96 96 HOH HOH A . C 3 HOH 89 97 97 HOH HOH A . C 3 HOH 90 98 98 HOH HOH A . C 3 HOH 91 99 99 HOH HOH A . C 3 HOH 92 100 100 HOH HOH A . C 3 HOH 93 101 101 HOH HOH A . C 3 HOH 94 102 102 HOH HOH A . C 3 HOH 95 103 103 HOH HOH A . C 3 HOH 96 104 104 HOH HOH A . C 3 HOH 97 105 105 HOH HOH A . C 3 HOH 98 106 106 HOH HOH A . D 3 HOH 1 13 6 HOH HOH B . D 3 HOH 2 21 21 HOH HOH B . D 3 HOH 3 32 32 HOH HOH B . D 3 HOH 4 41 41 HOH HOH B . D 3 HOH 5 59 59 HOH HOH B . D 3 HOH 6 61 61 HOH HOH B . D 3 HOH 7 75 75 HOH HOH B . D 3 HOH 8 79 79 HOH HOH B . D 3 HOH 9 107 107 HOH HOH B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id M3L _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id M3L _pdbx_struct_mod_residue.auth_seq_id 7 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-TRIMETHYLLYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1340 ? 1 MORE -9 ? 1 'SSA (A^2)' 8520 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2017-11-08 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 18.9190 19.4870 18.6760 0.0624 0.0121 0.0926 -0.0054 0.0106 0.0000 0.8213 0.6005 1.7663 0.1870 -0.5033 0.0764 0.0323 -0.0180 0.0472 -0.0229 0.0287 -0.0384 0.0086 0.0080 -0.0610 'X-RAY DIFFRACTION' 2 ? refined 13.4490 29.7360 13.3060 0.1240 0.0177 0.0984 0.0110 0.0030 0.0307 1.5390 8.2628 1.9003 0.4753 -0.2621 1.2125 -0.0626 0.0864 0.1270 -0.1429 -0.0095 0.2037 -0.2913 -0.0888 0.0721 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1078 ? ? A 1204 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 ? ? B 12 ? ? ? ? # _pdbx_phasing_MR.entry_id 3MO8 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.980 _pdbx_phasing_MR.d_res_low_rotation 40.280 _pdbx_phasing_MR.d_res_high_translation 1.980 _pdbx_phasing_MR.d_res_low_translation 40.280 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method mr # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 REFMAC refmac_5.5.0109 24/04/2001 program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.100 'Jan. 22, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 EPICS-based 'beamline control' ? ? ? ? 'data collection' ? ? ? 7 data 'acquisition systems' ? ? ? ? 'data collection' ? ? ? 8 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 9 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PHE _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 1148 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -85.84 _pdbx_validate_torsion.psi 36.48 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 1079 ? CG ? A GLU 2 CG 2 1 Y 1 A GLU 1079 ? CD ? A GLU 2 CD 3 1 Y 1 A GLU 1079 ? OE1 ? A GLU 2 OE1 4 1 Y 1 A GLU 1079 ? OE2 ? A GLU 2 OE2 5 1 Y 1 A GLU 1126 ? CG ? A GLU 49 CG 6 1 Y 1 A GLU 1126 ? CD ? A GLU 49 CD 7 1 Y 1 A GLU 1126 ? OE1 ? A GLU 49 OE1 8 1 Y 1 A GLU 1126 ? OE2 ? A GLU 49 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 1205 ? A GLU 128 2 1 Y 1 A GLN 1206 ? A GLN 129 3 1 Y 1 A SER 1207 ? A SER 130 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 M3L N N N N 230 M3L CA C N S 231 M3L CB C N N 232 M3L CG C N N 233 M3L CD C N N 234 M3L CE C N N 235 M3L NZ N N N 236 M3L C C N N 237 M3L O O N N 238 M3L OXT O N N 239 M3L CM1 C N N 240 M3L CM2 C N N 241 M3L CM3 C N N 242 M3L H H N N 243 M3L H2 H N N 244 M3L HA H N N 245 M3L HB2 H N N 246 M3L HB3 H N N 247 M3L HG2 H N N 248 M3L HG3 H N N 249 M3L HD2 H N N 250 M3L HD3 H N N 251 M3L HE2 H N N 252 M3L HE3 H N N 253 M3L HXT H N N 254 M3L HM11 H N N 255 M3L HM12 H N N 256 M3L HM13 H N N 257 M3L HM21 H N N 258 M3L HM22 H N N 259 M3L HM23 H N N 260 M3L HM31 H N N 261 M3L HM32 H N N 262 M3L HM33 H N N 263 MET N N N N 264 MET CA C N S 265 MET C C N N 266 MET O O N N 267 MET CB C N N 268 MET CG C N N 269 MET SD S N N 270 MET CE C N N 271 MET OXT O N N 272 MET H H N N 273 MET H2 H N N 274 MET HA H N N 275 MET HB2 H N N 276 MET HB3 H N N 277 MET HG2 H N N 278 MET HG3 H N N 279 MET HE1 H N N 280 MET HE2 H N N 281 MET HE3 H N N 282 MET HXT H N N 283 PHE N N N N 284 PHE CA C N S 285 PHE C C N N 286 PHE O O N N 287 PHE CB C N N 288 PHE CG C Y N 289 PHE CD1 C Y N 290 PHE CD2 C Y N 291 PHE CE1 C Y N 292 PHE CE2 C Y N 293 PHE CZ C Y N 294 PHE OXT O N N 295 PHE H H N N 296 PHE H2 H N N 297 PHE HA H N N 298 PHE HB2 H N N 299 PHE HB3 H N N 300 PHE HD1 H N N 301 PHE HD2 H N N 302 PHE HE1 H N N 303 PHE HE2 H N N 304 PHE HZ H N N 305 PHE HXT H N N 306 PRO N N N N 307 PRO CA C N S 308 PRO C C N N 309 PRO O O N N 310 PRO CB C N N 311 PRO CG C N N 312 PRO CD C N N 313 PRO OXT O N N 314 PRO H H N N 315 PRO HA H N N 316 PRO HB2 H N N 317 PRO HB3 H N N 318 PRO HG2 H N N 319 PRO HG3 H N N 320 PRO HD2 H N N 321 PRO HD3 H N N 322 PRO HXT H N N 323 SER N N N N 324 SER CA C N S 325 SER C C N N 326 SER O O N N 327 SER CB C N N 328 SER OG O N N 329 SER OXT O N N 330 SER H H N N 331 SER H2 H N N 332 SER HA H N N 333 SER HB2 H N N 334 SER HB3 H N N 335 SER HG H N N 336 SER HXT H N N 337 THR N N N N 338 THR CA C N S 339 THR C C N N 340 THR O O N N 341 THR CB C N R 342 THR OG1 O N N 343 THR CG2 C N N 344 THR OXT O N N 345 THR H H N N 346 THR H2 H N N 347 THR HA H N N 348 THR HB H N N 349 THR HG1 H N N 350 THR HG21 H N N 351 THR HG22 H N N 352 THR HG23 H N N 353 THR HXT H N N 354 TRP N N N N 355 TRP CA C N S 356 TRP C C N N 357 TRP O O N N 358 TRP CB C N N 359 TRP CG C Y N 360 TRP CD1 C Y N 361 TRP CD2 C Y N 362 TRP NE1 N Y N 363 TRP CE2 C Y N 364 TRP CE3 C Y N 365 TRP CZ2 C Y N 366 TRP CZ3 C Y N 367 TRP CH2 C Y N 368 TRP OXT O N N 369 TRP H H N N 370 TRP H2 H N N 371 TRP HA H N N 372 TRP HB2 H N N 373 TRP HB3 H N N 374 TRP HD1 H N N 375 TRP HE1 H N N 376 TRP HE3 H N N 377 TRP HZ2 H N N 378 TRP HZ3 H N N 379 TRP HH2 H N N 380 TRP HXT H N N 381 TYR N N N N 382 TYR CA C N S 383 TYR C C N N 384 TYR O O N N 385 TYR CB C N N 386 TYR CG C Y N 387 TYR CD1 C Y N 388 TYR CD2 C Y N 389 TYR CE1 C Y N 390 TYR CE2 C Y N 391 TYR CZ C Y N 392 TYR OH O N N 393 TYR OXT O N N 394 TYR H H N N 395 TYR H2 H N N 396 TYR HA H N N 397 TYR HB2 H N N 398 TYR HB3 H N N 399 TYR HD1 H N N 400 TYR HD2 H N N 401 TYR HE1 H N N 402 TYR HE2 H N N 403 TYR HH H N N 404 TYR HXT H N N 405 VAL N N N N 406 VAL CA C N S 407 VAL C C N N 408 VAL O O N N 409 VAL CB C N N 410 VAL CG1 C N N 411 VAL CG2 C N N 412 VAL OXT O N N 413 VAL H H N N 414 VAL H2 H N N 415 VAL HA H N N 416 VAL HB H N N 417 VAL HG11 H N N 418 VAL HG12 H N N 419 VAL HG13 H N N 420 VAL HG21 H N N 421 VAL HG22 H N N 422 VAL HG23 H N N 423 VAL HXT H N N 424 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 M3L N CA sing N N 218 M3L N H sing N N 219 M3L N H2 sing N N 220 M3L CA CB sing N N 221 M3L CA C sing N N 222 M3L CA HA sing N N 223 M3L CB CG sing N N 224 M3L CB HB2 sing N N 225 M3L CB HB3 sing N N 226 M3L CG CD sing N N 227 M3L CG HG2 sing N N 228 M3L CG HG3 sing N N 229 M3L CD CE sing N N 230 M3L CD HD2 sing N N 231 M3L CD HD3 sing N N 232 M3L CE NZ sing N N 233 M3L CE HE2 sing N N 234 M3L CE HE3 sing N N 235 M3L NZ CM1 sing N N 236 M3L NZ CM2 sing N N 237 M3L NZ CM3 sing N N 238 M3L C O doub N N 239 M3L C OXT sing N N 240 M3L OXT HXT sing N N 241 M3L CM1 HM11 sing N N 242 M3L CM1 HM12 sing N N 243 M3L CM1 HM13 sing N N 244 M3L CM2 HM21 sing N N 245 M3L CM2 HM22 sing N N 246 M3L CM2 HM23 sing N N 247 M3L CM3 HM31 sing N N 248 M3L CM3 HM32 sing N N 249 M3L CM3 HM33 sing N N 250 MET N CA sing N N 251 MET N H sing N N 252 MET N H2 sing N N 253 MET CA C sing N N 254 MET CA CB sing N N 255 MET CA HA sing N N 256 MET C O doub N N 257 MET C OXT sing N N 258 MET CB CG sing N N 259 MET CB HB2 sing N N 260 MET CB HB3 sing N N 261 MET CG SD sing N N 262 MET CG HG2 sing N N 263 MET CG HG3 sing N N 264 MET SD CE sing N N 265 MET CE HE1 sing N N 266 MET CE HE2 sing N N 267 MET CE HE3 sing N N 268 MET OXT HXT sing N N 269 PHE N CA sing N N 270 PHE N H sing N N 271 PHE N H2 sing N N 272 PHE CA C sing N N 273 PHE CA CB sing N N 274 PHE CA HA sing N N 275 PHE C O doub N N 276 PHE C OXT sing N N 277 PHE CB CG sing N N 278 PHE CB HB2 sing N N 279 PHE CB HB3 sing N N 280 PHE CG CD1 doub Y N 281 PHE CG CD2 sing Y N 282 PHE CD1 CE1 sing Y N 283 PHE CD1 HD1 sing N N 284 PHE CD2 CE2 doub Y N 285 PHE CD2 HD2 sing N N 286 PHE CE1 CZ doub Y N 287 PHE CE1 HE1 sing N N 288 PHE CE2 CZ sing Y N 289 PHE CE2 HE2 sing N N 290 PHE CZ HZ sing N N 291 PHE OXT HXT sing N N 292 PRO N CA sing N N 293 PRO N CD sing N N 294 PRO N H sing N N 295 PRO CA C sing N N 296 PRO CA CB sing N N 297 PRO CA HA sing N N 298 PRO C O doub N N 299 PRO C OXT sing N N 300 PRO CB CG sing N N 301 PRO CB HB2 sing N N 302 PRO CB HB3 sing N N 303 PRO CG CD sing N N 304 PRO CG HG2 sing N N 305 PRO CG HG3 sing N N 306 PRO CD HD2 sing N N 307 PRO CD HD3 sing N N 308 PRO OXT HXT sing N N 309 SER N CA sing N N 310 SER N H sing N N 311 SER N H2 sing N N 312 SER CA C sing N N 313 SER CA CB sing N N 314 SER CA HA sing N N 315 SER C O doub N N 316 SER C OXT sing N N 317 SER CB OG sing N N 318 SER CB HB2 sing N N 319 SER CB HB3 sing N N 320 SER OG HG sing N N 321 SER OXT HXT sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 TRP N CA sing N N 339 TRP N H sing N N 340 TRP N H2 sing N N 341 TRP CA C sing N N 342 TRP CA CB sing N N 343 TRP CA HA sing N N 344 TRP C O doub N N 345 TRP C OXT sing N N 346 TRP CB CG sing N N 347 TRP CB HB2 sing N N 348 TRP CB HB3 sing N N 349 TRP CG CD1 doub Y N 350 TRP CG CD2 sing Y N 351 TRP CD1 NE1 sing Y N 352 TRP CD1 HD1 sing N N 353 TRP CD2 CE2 doub Y N 354 TRP CD2 CE3 sing Y N 355 TRP NE1 CE2 sing Y N 356 TRP NE1 HE1 sing N N 357 TRP CE2 CZ2 sing Y N 358 TRP CE3 CZ3 doub Y N 359 TRP CE3 HE3 sing N N 360 TRP CZ2 CH2 doub Y N 361 TRP CZ2 HZ2 sing N N 362 TRP CZ3 CH2 sing Y N 363 TRP CZ3 HZ3 sing N N 364 TRP CH2 HH2 sing N N 365 TRP OXT HXT sing N N 366 TYR N CA sing N N 367 TYR N H sing N N 368 TYR N H2 sing N N 369 TYR CA C sing N N 370 TYR CA CB sing N N 371 TYR CA HA sing N N 372 TYR C O doub N N 373 TYR C OXT sing N N 374 TYR CB CG sing N N 375 TYR CB HB2 sing N N 376 TYR CB HB3 sing N N 377 TYR CG CD1 doub Y N 378 TYR CG CD2 sing Y N 379 TYR CD1 CE1 sing Y N 380 TYR CD1 HD1 sing N N 381 TYR CD2 CE2 doub Y N 382 TYR CD2 HD2 sing N N 383 TYR CE1 CZ doub Y N 384 TYR CE1 HE1 sing N N 385 TYR CE2 CZ sing Y N 386 TYR CE2 HE2 sing N N 387 TYR CZ OH sing N N 388 TYR OH HH sing N N 389 TYR OXT HXT sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3L42 _pdbx_initial_refinement_model.details 'PDB entry 3L42' #