data_3MQK # _entry.id 3MQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MQK pdb_00003mqk 10.2210/pdb3mqk/pdb NDB NA0533 ? ? RCSB RCSB058875 ? ? WWPDB D_1000058875 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MQK _pdbx_database_status.recvd_initial_deposition_date 2010-04-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhou, J.' 1 'Liang, B.' 2 'Li, H.' 3 # _citation.id primary _citation.title 'Structural and functional evidence of high specificity of Cbf5 for ACA trinucleotide.' _citation.journal_abbrev Rna _citation.journal_volume 17 _citation.page_first 244 _citation.page_last 250 _citation.year 2011 _citation.journal_id_ASTM RNARFU _citation.country UK _citation.journal_id_ISSN 1355-8382 _citation.journal_id_CSD 2122 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21149572 _citation.pdbx_database_id_DOI 10.1261/rna.2415811 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhou, J.' 1 ? primary 'Liang, B.' 2 ? primary 'Li, H.' 3 ? # _cell.entry_id 3MQK _cell.length_a 105.696 _cell.length_b 105.696 _cell.length_c 243.925 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MQK _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'tRNA pseudouridine synthase B' 37119.305 1 5.4.99.- ? 'UNP residues 8-335' ? 2 polymer man 'Ribosome biogenesis protein Nop10' 6205.335 1 ? ? 'UNP residues 4-55' ? 3 polymer man 'Small nucleolar rnp gar1-like protein' 8672.303 1 ? ? 'UNP residues 8-82' ? 4 polymer syn ;RNA (5'-R(P*GP*UP*UP*CP*GP*AP*UP*CP*CP*AP*CP*AP*G)-3') ; 4117.501 1 ? ? ? ? 5 polymer syn ;RNA (5'-R(P*CP*GP*AP*UP*CP*CP*AP*CP*A)-3') ; 2814.759 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'tRNA pseudouridine 55 synthase, Psi55 synthase, tRNA-uridine isomerase, tRNA pseudouridylate synthase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;RILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSG VLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRD VLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAV EHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPR DWYPKLWE ; ;RILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSG VLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRD VLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAV EHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPR DWYPKLWE ; A ? 2 'polypeptide(L)' no no RIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI RIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI B ? 3 'polypeptide(L)' no no MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDER MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDER C ? 4 polyribonucleotide no no GUUCGAUCCACAG GUUCGAUCCACAG D ? 5 polyribonucleotide no no CGAUCCACA CGAUCCACA E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ILE n 1 3 LEU n 1 4 PRO n 1 5 ALA n 1 6 ASP n 1 7 ILE n 1 8 LYS n 1 9 ARG n 1 10 GLU n 1 11 VAL n 1 12 LEU n 1 13 ILE n 1 14 LYS n 1 15 ASP n 1 16 GLU n 1 17 ASN n 1 18 ALA n 1 19 GLU n 1 20 THR n 1 21 ASN n 1 22 PRO n 1 23 ASP n 1 24 TRP n 1 25 GLY n 1 26 PHE n 1 27 PRO n 1 28 PRO n 1 29 GLU n 1 30 LYS n 1 31 ARG n 1 32 PRO n 1 33 ILE n 1 34 GLU n 1 35 MET n 1 36 HIS n 1 37 ILE n 1 38 GLN n 1 39 PHE n 1 40 GLY n 1 41 VAL n 1 42 ILE n 1 43 ASN n 1 44 LEU n 1 45 ASP n 1 46 LYS n 1 47 PRO n 1 48 PRO n 1 49 GLY n 1 50 PRO n 1 51 THR n 1 52 SER n 1 53 HIS n 1 54 GLU n 1 55 VAL n 1 56 VAL n 1 57 ALA n 1 58 TRP n 1 59 ILE n 1 60 LYS n 1 61 LYS n 1 62 ILE n 1 63 LEU n 1 64 ASN n 1 65 LEU n 1 66 GLU n 1 67 LYS n 1 68 ALA n 1 69 GLY n 1 70 HIS n 1 71 GLY n 1 72 GLY n 1 73 THR n 1 74 LEU n 1 75 ASP n 1 76 PRO n 1 77 LYS n 1 78 VAL n 1 79 SER n 1 80 GLY n 1 81 VAL n 1 82 LEU n 1 83 PRO n 1 84 VAL n 1 85 ALA n 1 86 LEU n 1 87 GLU n 1 88 LYS n 1 89 ALA n 1 90 THR n 1 91 ARG n 1 92 VAL n 1 93 VAL n 1 94 GLN n 1 95 ALA n 1 96 LEU n 1 97 LEU n 1 98 PRO n 1 99 ALA n 1 100 GLY n 1 101 LYS n 1 102 GLU n 1 103 TYR n 1 104 VAL n 1 105 ALA n 1 106 LEU n 1 107 MET n 1 108 HIS n 1 109 LEU n 1 110 HIS n 1 111 GLY n 1 112 ASP n 1 113 VAL n 1 114 PRO n 1 115 GLU n 1 116 ASP n 1 117 LYS n 1 118 ILE n 1 119 ILE n 1 120 GLN n 1 121 VAL n 1 122 MET n 1 123 LYS n 1 124 GLU n 1 125 PHE n 1 126 GLU n 1 127 GLY n 1 128 GLU n 1 129 ILE n 1 130 ILE n 1 131 GLN n 1 132 ARG n 1 133 PRO n 1 134 PRO n 1 135 LEU n 1 136 ARG n 1 137 SER n 1 138 ALA n 1 139 VAL n 1 140 LYS n 1 141 ARG n 1 142 ARG n 1 143 LEU n 1 144 ARG n 1 145 THR n 1 146 ARG n 1 147 LYS n 1 148 VAL n 1 149 TYR n 1 150 TYR n 1 151 ILE n 1 152 GLU n 1 153 VAL n 1 154 LEU n 1 155 GLU n 1 156 ILE n 1 157 GLU n 1 158 GLY n 1 159 ARG n 1 160 ASP n 1 161 VAL n 1 162 LEU n 1 163 PHE n 1 164 ARG n 1 165 VAL n 1 166 GLY n 1 167 VAL n 1 168 GLU n 1 169 ALA n 1 170 GLY n 1 171 THR n 1 172 TYR n 1 173 ILE n 1 174 ARG n 1 175 SER n 1 176 LEU n 1 177 ILE n 1 178 HIS n 1 179 HIS n 1 180 ILE n 1 181 GLY n 1 182 LEU n 1 183 ALA n 1 184 LEU n 1 185 GLY n 1 186 VAL n 1 187 GLY n 1 188 ALA n 1 189 HIS n 1 190 MET n 1 191 SER n 1 192 GLU n 1 193 LEU n 1 194 ARG n 1 195 ARG n 1 196 THR n 1 197 ARG n 1 198 SER n 1 199 GLY n 1 200 PRO n 1 201 PHE n 1 202 LYS n 1 203 GLU n 1 204 ASP n 1 205 GLU n 1 206 THR n 1 207 LEU n 1 208 ILE n 1 209 THR n 1 210 LEU n 1 211 HIS n 1 212 ASP n 1 213 LEU n 1 214 VAL n 1 215 ASP n 1 216 TYR n 1 217 TYR n 1 218 TYR n 1 219 PHE n 1 220 TRP n 1 221 LYS n 1 222 GLU n 1 223 ASP n 1 224 GLY n 1 225 ILE n 1 226 GLU n 1 227 GLU n 1 228 TYR n 1 229 PHE n 1 230 ARG n 1 231 LYS n 1 232 ALA n 1 233 ILE n 1 234 GLN n 1 235 PRO n 1 236 MET n 1 237 GLU n 1 238 LYS n 1 239 ALA n 1 240 VAL n 1 241 GLU n 1 242 HIS n 1 243 LEU n 1 244 PRO n 1 245 LYS n 1 246 VAL n 1 247 TRP n 1 248 ILE n 1 249 LYS n 1 250 ASP n 1 251 SER n 1 252 ALA n 1 253 VAL n 1 254 ALA n 1 255 ALA n 1 256 VAL n 1 257 THR n 1 258 HIS n 1 259 GLY n 1 260 ALA n 1 261 ASP n 1 262 LEU n 1 263 ALA n 1 264 VAL n 1 265 PRO n 1 266 GLY n 1 267 ILE n 1 268 ALA n 1 269 LYS n 1 270 LEU n 1 271 HIS n 1 272 ALA n 1 273 GLY n 1 274 ILE n 1 275 LYS n 1 276 ARG n 1 277 GLY n 1 278 ASP n 1 279 LEU n 1 280 VAL n 1 281 ALA n 1 282 ILE n 1 283 MET n 1 284 THR n 1 285 LEU n 1 286 LYS n 1 287 ASP n 1 288 GLU n 1 289 LEU n 1 290 VAL n 1 291 ALA n 1 292 LEU n 1 293 GLY n 1 294 LYS n 1 295 ALA n 1 296 MET n 1 297 MET n 1 298 THR n 1 299 SER n 1 300 GLN n 1 301 GLU n 1 302 MET n 1 303 LEU n 1 304 GLU n 1 305 LYS n 1 306 THR n 1 307 LYS n 1 308 GLY n 1 309 ILE n 1 310 ALA n 1 311 VAL n 1 312 ASP n 1 313 VAL n 1 314 GLU n 1 315 LYS n 1 316 VAL n 1 317 PHE n 1 318 MET n 1 319 PRO n 1 320 ARG n 1 321 ASP n 1 322 TRP n 1 323 TYR n 1 324 PRO n 1 325 LYS n 1 326 LEU n 1 327 TRP n 1 328 GLU n 2 1 ARG n 2 2 ILE n 2 3 ARG n 2 4 LYS n 2 5 CYS n 2 6 PRO n 2 7 LYS n 2 8 CYS n 2 9 GLY n 2 10 ARG n 2 11 TYR n 2 12 THR n 2 13 LEU n 2 14 LYS n 2 15 GLU n 2 16 VAL n 2 17 CYS n 2 18 PRO n 2 19 VAL n 2 20 CYS n 2 21 GLY n 2 22 GLU n 2 23 LYS n 2 24 THR n 2 25 LYS n 2 26 VAL n 2 27 ALA n 2 28 HIS n 2 29 PRO n 2 30 PRO n 2 31 ARG n 2 32 PHE n 2 33 SER n 2 34 PRO n 2 35 GLU n 2 36 ASP n 2 37 PRO n 2 38 TYR n 2 39 GLY n 2 40 GLU n 2 41 TYR n 2 42 ARG n 2 43 ARG n 2 44 ARG n 2 45 TRP n 2 46 LYS n 2 47 ARG n 2 48 GLU n 2 49 VAL n 2 50 LEU n 2 51 GLY n 2 52 ILE n 3 1 MET n 3 2 LYS n 3 3 ARG n 3 4 LEU n 3 5 GLY n 3 6 LYS n 3 7 VAL n 3 8 LEU n 3 9 HIS n 3 10 TYR n 3 11 ALA n 3 12 LYS n 3 13 GLN n 3 14 GLY n 3 15 PHE n 3 16 LEU n 3 17 ILE n 3 18 VAL n 3 19 ARG n 3 20 THR n 3 21 ASN n 3 22 TRP n 3 23 VAL n 3 24 PRO n 3 25 SER n 3 26 LEU n 3 27 ASN n 3 28 ASP n 3 29 ARG n 3 30 VAL n 3 31 VAL n 3 32 ASP n 3 33 LYS n 3 34 ARG n 3 35 LEU n 3 36 GLN n 3 37 PHE n 3 38 VAL n 3 39 GLY n 3 40 ILE n 3 41 VAL n 3 42 LYS n 3 43 ASP n 3 44 VAL n 3 45 PHE n 3 46 GLY n 3 47 PRO n 3 48 VAL n 3 49 LYS n 3 50 MET n 3 51 PRO n 3 52 TYR n 3 53 VAL n 3 54 ALA n 3 55 ILE n 3 56 LYS n 3 57 PRO n 3 58 LYS n 3 59 VAL n 3 60 SER n 3 61 ASN n 3 62 PRO n 3 63 GLU n 3 64 ILE n 3 65 TYR n 3 66 VAL n 3 67 GLY n 3 68 GLU n 3 69 VAL n 3 70 LEU n 3 71 TYR n 3 72 VAL n 3 73 ASP n 3 74 GLU n 3 75 ARG n 4 1 G n 4 2 U n 4 3 U n 4 4 C n 4 5 G n 4 6 A n 4 7 U n 4 8 C n 4 9 C n 4 10 A n 4 11 C n 4 12 A n 4 13 G n 5 1 C n 5 2 G n 5 3 A n 5 4 U n 5 5 C n 5 6 C n 5 7 A n 5 8 C n 5 9 A n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? 'truB, PF1785' ? ? ? ? ? ? 'Pyrococcus furiosus' 2261 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? ? ? PF1141 ? ? ? ? ? ? 'Pyrococcus furiosus' 2261 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? ? ? PF1791 ? ? ? ? ? ? 'Pyrococcus furiosus' 2261 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP TRUB_PYRFU Q7LWY0 1 ;RILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSG VLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRD VLFRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAV EHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPR DWYPKLWE ; 8 ? 2 UNP NOP10_PYRFU Q8U1R4 2 RIRKCPKCGRYTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYRRRWKREVLGI 4 ? 3 UNP Q8U029_PYRFU Q8U029 3 MKRLGKVLHYAKQGFLIVRTNWVPSLNDRVVDKRLQFVGIVKDVFGPVKMPYVAIKPKVSNPEIYVGEVLYVDER 8 ? 4 PDB 3MQK 3MQK 4 GUUCGAUCCACAG ? ? 5 PDB 3MQK 3MQK 5 CGAUCCACA ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MQK A 1 ? 328 ? Q7LWY0 8 ? 335 ? 11 338 2 2 3MQK B 1 ? 52 ? Q8U1R4 4 ? 55 ? 4 55 3 3 3MQK C 1 ? 75 ? Q8U029 8 ? 82 ? 1 75 4 4 3MQK D 1 ? 13 ? 3MQK 5 ? 17 ? 5 17 5 5 3MQK E 1 ? 9 ? 3MQK 8 ? 16 ? 8 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MQK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.34 _exptl_crystal.density_percent_sol 63.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 303 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details ;120 mM magnesium acetate tetrahydrate, 50 mM MES PH 5.6, 20% 2-Methyl-2,4-pentanediol, VAPOR DIFFUSION, HANGING DROP, temperature 303K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2007-12-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3MQK _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100 _reflns.d_resolution_high 2.8 _reflns.number_obs 20726 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 48.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 20.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.778 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.8 _reflns_shell.pdbx_redundancy 17.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2000 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3MQK _refine.ls_number_reflns_obs 19905 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.12 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.378 _refine.ls_d_res_high 2.8 _refine.ls_percent_reflns_obs 96.39 _refine.ls_R_factor_obs 0.1903 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1846 _refine.ls_R_factor_R_free 0.2441 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.74 _refine.ls_number_reflns_R_free 1938 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -3.5552 _refine.aniso_B[2][2] -3.5552 _refine.aniso_B[3][3] 7.1103 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.307 _refine.solvent_model_param_bsol 51.496 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB entry 2EY4' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 2.55 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3656 _refine_hist.pdbx_number_atoms_nucleic_acid 464 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4120 _refine_hist.d_res_high 2.8 _refine_hist.d_res_low 33.378 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 4264 'X-RAY DIFFRACTION' ? f_angle_d 1.228 ? ? 5856 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.066 ? ? 1722 'X-RAY DIFFRACTION' ? f_chiral_restr 0.077 ? ? 667 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 663 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.8 2.8693 1141 0.2189 89.00 0.3004 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.8693 2.9469 1166 0.2148 91.00 0.2997 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.9469 3.0335 1188 0.1920 93.00 0.2856 . . 150 . . . . 'X-RAY DIFFRACTION' . 3.0335 3.1314 1200 0.2018 93.00 0.2710 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.1314 3.2432 1257 0.1952 96.00 0.2809 . . 125 . . . . 'X-RAY DIFFRACTION' . 3.2432 3.3729 1278 0.1900 96.00 0.2551 . . 125 . . . . 'X-RAY DIFFRACTION' . 3.3729 3.5263 1308 0.1836 98.00 0.2717 . . 128 . . . . 'X-RAY DIFFRACTION' . 3.5263 3.7120 1258 0.1764 98.00 0.2309 . . 149 . . . . 'X-RAY DIFFRACTION' . 3.7120 3.9442 1308 0.1653 98.00 0.2324 . . 139 . . . . 'X-RAY DIFFRACTION' . 3.9442 4.2482 1326 0.1437 99.00 0.1897 . . 136 . . . . 'X-RAY DIFFRACTION' . 4.2482 4.6746 1320 0.1407 99.00 0.2276 . . 140 . . . . 'X-RAY DIFFRACTION' . 4.6746 5.3487 1344 0.1657 99.00 0.2227 . . 145 . . . . 'X-RAY DIFFRACTION' . 5.3487 6.7297 1386 0.1958 99.00 0.2674 . . 132 . . . . 'X-RAY DIFFRACTION' . 6.7297 33.3808 1487 0.1890 99.00 0.2114 . . 156 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3MQK _struct.title 'Cbf5-Nop10-Gar1 complex binding with 17mer RNA containing ACA trinucleotide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MQK _struct_keywords.pdbx_keywords 'Isomerase/RNA binding protein/rna' _struct_keywords.text ;Protein-RNA complex, Box H/ACA, pseudouridine synthase, post-transcriptional modification, Isomerase, tRNA processing, RNA-binding, Isomerase-RNA binding protein-rna complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 32 ? PHE A 39 ? PRO A 42 PHE A 49 1 ? 8 HELX_P HELX_P2 2 THR A 51 ? ASN A 64 ? THR A 61 ASN A 74 1 ? 14 HELX_P HELX_P3 3 LYS A 88 ? LEU A 96 ? LYS A 98 LEU A 106 5 ? 9 HELX_P HELX_P4 4 PRO A 114 ? PHE A 125 ? PRO A 124 PHE A 135 1 ? 12 HELX_P HELX_P5 5 TYR A 172 ? LEU A 184 ? TYR A 182 LEU A 194 1 ? 13 HELX_P HELX_P6 6 THR A 209 ? GLU A 222 ? THR A 219 GLU A 232 1 ? 14 HELX_P HELX_P7 7 GLU A 226 ? ALA A 232 ? GLU A 236 ALA A 242 1 ? 7 HELX_P HELX_P8 8 GLU A 237 ? GLU A 241 ? GLU A 247 GLU A 251 5 ? 5 HELX_P HELX_P9 9 LYS A 249 ? HIS A 258 ? LYS A 259 HIS A 268 1 ? 10 HELX_P HELX_P10 10 THR A 298 ? LYS A 305 ? THR A 308 LYS A 315 1 ? 8 HELX_P HELX_P11 11 TYR B 38 ? ARG B 47 ? TYR B 41 ARG B 50 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 8 SG ? ? B CYS 8 B CYS 11 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf2 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 17 SG ? ? B CYS 8 B CYS 20 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf3 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 20 SG ? ? B CYS 8 B CYS 23 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf4 disulf ? ? B CYS 8 SG ? ? ? 1_555 B CYS 17 SG ? ? B CYS 11 B CYS 20 1_555 ? ? ? ? ? ? ? 2.052 ? ? disulf5 disulf ? ? B CYS 8 SG ? ? ? 1_555 B CYS 20 SG ? ? B CYS 11 B CYS 23 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf6 disulf ? ? B CYS 17 SG ? ? ? 1_555 B CYS 20 SG ? ? B CYS 20 B CYS 23 1_555 ? ? ? ? ? ? ? 2.035 ? ? hydrog1 hydrog ? ? D U 2 O2 ? ? ? 1_555 D U 3 N3 ? ? D U 6 D U 7 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog2 hydrog ? ? D C 4 N4 ? ? ? 1_555 E A 7 N1 ? ? D C 8 E A 14 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog3 hydrog ? ? D G 5 N1 ? ? ? 1_555 E C 5 N3 ? ? D G 9 E C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D G 5 N2 ? ? ? 1_555 E C 5 O2 ? ? D G 9 E C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D G 5 O6 ? ? ? 1_555 E C 5 N4 ? ? D G 9 E C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D A 6 N1 ? ? ? 1_555 E U 4 N3 ? ? D A 10 E U 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D A 6 N6 ? ? ? 1_555 E U 4 O4 ? ? D A 10 E U 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D U 7 N3 ? ? ? 1_555 E A 3 N1 ? ? D U 11 E A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D U 7 O4 ? ? ? 1_555 E A 3 N6 ? ? D U 11 E A 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D C 8 N3 ? ? ? 1_555 E G 2 N1 ? ? D C 12 E G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D C 8 N4 ? ? ? 1_555 E G 2 O6 ? ? D C 12 E G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D C 8 O2 ? ? ? 1_555 E G 2 N2 ? ? D C 12 E G 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D C 9 N3 ? ? ? 1_555 E C 1 N4 ? ? D C 13 E C 8 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog14 hydrog ? ? D A 10 N6 ? ? ? 1_555 E A 3 N3 ? ? D A 14 E A 10 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 5 ? C ? 14 ? D ? 13 ? E ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel C 8 9 ? anti-parallel C 9 10 ? anti-parallel C 10 11 ? anti-parallel C 11 12 ? anti-parallel C 12 13 ? anti-parallel C 13 14 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel D 6 7 ? anti-parallel D 7 8 ? anti-parallel D 8 9 ? anti-parallel D 9 10 ? anti-parallel D 10 11 ? anti-parallel D 11 12 ? anti-parallel D 12 13 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 11 ? ILE A 13 ? VAL A 21 ILE A 23 A 2 ILE A 267 ? HIS A 271 ? ILE A 277 HIS A 281 A 3 LYS A 245 ? ILE A 248 ? LYS A 255 ILE A 258 A 4 LEU A 279 ? MET A 283 ? LEU A 289 MET A 293 A 5 LEU A 289 ? ALA A 295 ? LEU A 299 ALA A 305 A 6 ILE A 309 ? VAL A 316 ? ILE A 319 VAL A 326 A 7 LEU A 262 ? ALA A 263 ? LEU A 272 ALA A 273 B 1 ILE A 233 ? PRO A 235 ? ILE A 243 PRO A 245 B 2 GLY A 40 ? LYS A 46 ? GLY A 50 LYS A 56 B 3 SER A 79 ? LEU A 86 ? SER A 89 LEU A 96 B 4 ALA A 188 ? SER A 198 ? ALA A 198 SER A 208 B 5 PHE A 201 ? LYS A 202 ? PHE A 211 LYS A 212 C 1 ILE A 233 ? PRO A 235 ? ILE A 243 PRO A 245 C 2 GLY A 40 ? LYS A 46 ? GLY A 50 LYS A 56 C 3 SER A 79 ? LEU A 86 ? SER A 89 LEU A 96 C 4 ALA A 188 ? SER A 198 ? ALA A 198 SER A 208 C 5 LYS A 101 ? LEU A 109 ? LYS A 111 LEU A 119 C 6 ASP A 160 ? VAL A 167 ? ASP A 170 VAL A 177 C 7 THR A 145 ? GLU A 157 ? THR A 155 GLU A 167 C 8 GLY A 127 ? ILE A 130 ? GLY A 137 ILE A 140 C 9 PHE C 37 ? PRO C 47 ? PHE C 37 PRO C 47 C 10 TYR C 52 ? PRO C 57 ? TYR C 52 PRO C 57 C 11 PHE C 15 ? ARG C 19 ? PHE C 15 ARG C 19 C 12 LYS C 2 ? ALA C 11 ? LYS C 2 ALA C 11 C 13 VAL C 69 ? VAL C 72 ? VAL C 69 VAL C 72 C 14 ARG C 29 ? VAL C 31 ? ARG C 29 VAL C 31 D 1 ALA A 68 ? HIS A 70 ? ALA A 78 HIS A 80 D 2 SER A 79 ? LEU A 86 ? SER A 89 LEU A 96 D 3 ALA A 188 ? SER A 198 ? ALA A 198 SER A 208 D 4 LYS A 101 ? LEU A 109 ? LYS A 111 LEU A 119 D 5 ASP A 160 ? VAL A 167 ? ASP A 170 VAL A 177 D 6 THR A 145 ? GLU A 157 ? THR A 155 GLU A 167 D 7 GLY A 127 ? ILE A 130 ? GLY A 137 ILE A 140 D 8 PHE C 37 ? PRO C 47 ? PHE C 37 PRO C 47 D 9 ARG C 29 ? VAL C 31 ? ARG C 29 VAL C 31 D 10 VAL C 69 ? VAL C 72 ? VAL C 69 VAL C 72 D 11 LYS C 2 ? ALA C 11 ? LYS C 2 ALA C 11 D 12 PHE C 15 ? ARG C 19 ? PHE C 15 ARG C 19 D 13 TYR C 52 ? PRO C 57 ? TYR C 52 PRO C 57 E 1 TYR B 11 ? THR B 12 ? TYR B 14 THR B 15 E 2 ARG B 3 ? LYS B 4 ? ARG B 6 LYS B 7 E 3 LYS B 25 ? VAL B 26 ? LYS B 28 VAL B 29 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 12 ? N LEU A 22 O LEU A 270 ? O LEU A 280 A 2 3 O LYS A 269 ? O LYS A 279 N TRP A 247 ? N TRP A 257 A 3 4 N VAL A 246 ? N VAL A 256 O MET A 283 ? O MET A 293 A 4 5 N ILE A 282 ? N ILE A 292 O ALA A 291 ? O ALA A 301 A 5 6 N LYS A 294 ? N LYS A 304 O ASP A 312 ? O ASP A 322 A 6 7 O ALA A 310 ? O ALA A 320 N LEU A 262 ? N LEU A 272 B 1 2 O GLN A 234 ? O GLN A 244 N VAL A 41 ? N VAL A 51 B 2 3 N LEU A 44 ? N LEU A 54 O LEU A 82 ? O LEU A 92 B 3 4 N SER A 79 ? N SER A 89 O ARG A 195 ? O ARG A 205 B 4 5 N SER A 198 ? N SER A 208 O PHE A 201 ? O PHE A 211 C 1 2 O GLN A 234 ? O GLN A 244 N VAL A 41 ? N VAL A 51 C 2 3 N LEU A 44 ? N LEU A 54 O LEU A 82 ? O LEU A 92 C 3 4 N SER A 79 ? N SER A 89 O ARG A 195 ? O ARG A 205 C 4 5 O THR A 196 ? O THR A 206 N GLU A 102 ? N GLU A 112 C 5 6 N MET A 107 ? N MET A 117 O VAL A 161 ? O VAL A 171 C 6 7 O ARG A 164 ? O ARG A 174 N GLU A 152 ? N GLU A 162 C 7 8 O ARG A 146 ? O ARG A 156 N ILE A 129 ? N ILE A 139 C 8 9 N ILE A 130 ? N ILE A 140 O GLY C 46 ? O GLY C 46 C 9 10 N PHE C 45 ? N PHE C 45 O TYR C 52 ? O TYR C 52 C 10 11 O ILE C 55 ? O ILE C 55 N LEU C 16 ? N LEU C 16 C 11 12 O PHE C 15 ? O PHE C 15 N ALA C 11 ? N ALA C 11 C 12 13 N LYS C 2 ? N LYS C 2 O VAL C 72 ? O VAL C 72 C 13 14 O TYR C 71 ? O TYR C 71 N VAL C 31 ? N VAL C 31 D 1 2 N GLY A 69 ? N GLY A 79 O ALA A 85 ? O ALA A 95 D 2 3 N SER A 79 ? N SER A 89 O ARG A 195 ? O ARG A 205 D 3 4 O THR A 196 ? O THR A 206 N GLU A 102 ? N GLU A 112 D 4 5 N MET A 107 ? N MET A 117 O VAL A 161 ? O VAL A 171 D 5 6 O ARG A 164 ? O ARG A 174 N GLU A 152 ? N GLU A 162 D 6 7 O ARG A 146 ? O ARG A 156 N ILE A 129 ? N ILE A 139 D 7 8 N ILE A 130 ? N ILE A 140 O GLY C 46 ? O GLY C 46 D 8 9 O VAL C 38 ? O VAL C 38 N VAL C 30 ? N VAL C 30 D 9 10 N VAL C 31 ? N VAL C 31 O TYR C 71 ? O TYR C 71 D 10 11 O VAL C 72 ? O VAL C 72 N LYS C 2 ? N LYS C 2 D 11 12 N ALA C 11 ? N ALA C 11 O PHE C 15 ? O PHE C 15 D 12 13 N LEU C 16 ? N LEU C 16 O ILE C 55 ? O ILE C 55 E 1 2 O THR B 12 ? O THR B 15 N ARG B 3 ? N ARG B 6 E 2 3 N LYS B 4 ? N LYS B 7 O LYS B 25 ? O LYS B 28 # _database_PDB_matrix.entry_id 3MQK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MQK _atom_sites.fract_transf_matrix[1][1] 0.009461 _atom_sites.fract_transf_matrix[1][2] 0.005462 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010925 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004100 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 11 11 ARG ARG A . n A 1 2 ILE 2 12 12 ILE ILE A . n A 1 3 LEU 3 13 13 LEU LEU A . n A 1 4 PRO 4 14 14 PRO PRO A . n A 1 5 ALA 5 15 15 ALA ALA A . n A 1 6 ASP 6 16 16 ASP ASP A . n A 1 7 ILE 7 17 17 ILE ILE A . n A 1 8 LYS 8 18 18 LYS LYS A . n A 1 9 ARG 9 19 19 ARG ARG A . n A 1 10 GLU 10 20 20 GLU GLU A . n A 1 11 VAL 11 21 21 VAL VAL A . n A 1 12 LEU 12 22 22 LEU LEU A . n A 1 13 ILE 13 23 23 ILE ILE A . n A 1 14 LYS 14 24 24 LYS LYS A . n A 1 15 ASP 15 25 25 ASP ASP A . n A 1 16 GLU 16 26 26 GLU GLU A . n A 1 17 ASN 17 27 27 ASN ASN A . n A 1 18 ALA 18 28 28 ALA ALA A . n A 1 19 GLU 19 29 29 GLU GLU A . n A 1 20 THR 20 30 30 THR THR A . n A 1 21 ASN 21 31 31 ASN ASN A . n A 1 22 PRO 22 32 32 PRO PRO A . n A 1 23 ASP 23 33 33 ASP ASP A . n A 1 24 TRP 24 34 34 TRP TRP A . n A 1 25 GLY 25 35 35 GLY GLY A . n A 1 26 PHE 26 36 36 PHE PHE A . n A 1 27 PRO 27 37 37 PRO PRO A . n A 1 28 PRO 28 38 38 PRO PRO A . n A 1 29 GLU 29 39 39 GLU GLU A . n A 1 30 LYS 30 40 40 LYS LYS A . n A 1 31 ARG 31 41 41 ARG ARG A . n A 1 32 PRO 32 42 42 PRO PRO A . n A 1 33 ILE 33 43 43 ILE ILE A . n A 1 34 GLU 34 44 44 GLU GLU A . n A 1 35 MET 35 45 45 MET MET A . n A 1 36 HIS 36 46 46 HIS HIS A . n A 1 37 ILE 37 47 47 ILE ILE A . n A 1 38 GLN 38 48 48 GLN GLN A . n A 1 39 PHE 39 49 49 PHE PHE A . n A 1 40 GLY 40 50 50 GLY GLY A . n A 1 41 VAL 41 51 51 VAL VAL A . n A 1 42 ILE 42 52 52 ILE ILE A . n A 1 43 ASN 43 53 53 ASN ASN A . n A 1 44 LEU 44 54 54 LEU LEU A . n A 1 45 ASP 45 55 55 ASP ASP A . n A 1 46 LYS 46 56 56 LYS LYS A . n A 1 47 PRO 47 57 57 PRO PRO A . n A 1 48 PRO 48 58 58 PRO PRO A . n A 1 49 GLY 49 59 59 GLY GLY A . n A 1 50 PRO 50 60 60 PRO PRO A . n A 1 51 THR 51 61 61 THR THR A . n A 1 52 SER 52 62 62 SER SER A . n A 1 53 HIS 53 63 63 HIS HIS A . n A 1 54 GLU 54 64 64 GLU GLU A . n A 1 55 VAL 55 65 65 VAL VAL A . n A 1 56 VAL 56 66 66 VAL VAL A . n A 1 57 ALA 57 67 67 ALA ALA A . n A 1 58 TRP 58 68 68 TRP TRP A . n A 1 59 ILE 59 69 69 ILE ILE A . n A 1 60 LYS 60 70 70 LYS LYS A . n A 1 61 LYS 61 71 71 LYS LYS A . n A 1 62 ILE 62 72 72 ILE ILE A . n A 1 63 LEU 63 73 73 LEU LEU A . n A 1 64 ASN 64 74 74 ASN ASN A . n A 1 65 LEU 65 75 75 LEU LEU A . n A 1 66 GLU 66 76 76 GLU GLU A . n A 1 67 LYS 67 77 77 LYS LYS A . n A 1 68 ALA 68 78 78 ALA ALA A . n A 1 69 GLY 69 79 79 GLY GLY A . n A 1 70 HIS 70 80 80 HIS HIS A . n A 1 71 GLY 71 81 81 GLY GLY A . n A 1 72 GLY 72 82 82 GLY GLY A . n A 1 73 THR 73 83 83 THR THR A . n A 1 74 LEU 74 84 84 LEU LEU A . n A 1 75 ASP 75 85 85 ASP ASP A . n A 1 76 PRO 76 86 86 PRO PRO A . n A 1 77 LYS 77 87 87 LYS LYS A . n A 1 78 VAL 78 88 88 VAL VAL A . n A 1 79 SER 79 89 89 SER SER A . n A 1 80 GLY 80 90 90 GLY GLY A . n A 1 81 VAL 81 91 91 VAL VAL A . n A 1 82 LEU 82 92 92 LEU LEU A . n A 1 83 PRO 83 93 93 PRO PRO A . n A 1 84 VAL 84 94 94 VAL VAL A . n A 1 85 ALA 85 95 95 ALA ALA A . n A 1 86 LEU 86 96 96 LEU LEU A . n A 1 87 GLU 87 97 97 GLU GLU A . n A 1 88 LYS 88 98 98 LYS LYS A . n A 1 89 ALA 89 99 99 ALA ALA A . n A 1 90 THR 90 100 100 THR THR A . n A 1 91 ARG 91 101 101 ARG ARG A . n A 1 92 VAL 92 102 102 VAL VAL A . n A 1 93 VAL 93 103 103 VAL VAL A . n A 1 94 GLN 94 104 104 GLN GLN A . n A 1 95 ALA 95 105 105 ALA ALA A . n A 1 96 LEU 96 106 106 LEU LEU A . n A 1 97 LEU 97 107 107 LEU LEU A . n A 1 98 PRO 98 108 108 PRO PRO A . n A 1 99 ALA 99 109 109 ALA ALA A . n A 1 100 GLY 100 110 110 GLY GLY A . n A 1 101 LYS 101 111 111 LYS LYS A . n A 1 102 GLU 102 112 112 GLU GLU A . n A 1 103 TYR 103 113 113 TYR TYR A . n A 1 104 VAL 104 114 114 VAL VAL A . n A 1 105 ALA 105 115 115 ALA ALA A . n A 1 106 LEU 106 116 116 LEU LEU A . n A 1 107 MET 107 117 117 MET MET A . n A 1 108 HIS 108 118 118 HIS HIS A . n A 1 109 LEU 109 119 119 LEU LEU A . n A 1 110 HIS 110 120 120 HIS HIS A . n A 1 111 GLY 111 121 121 GLY GLY A . n A 1 112 ASP 112 122 122 ASP ASP A . n A 1 113 VAL 113 123 123 VAL VAL A . n A 1 114 PRO 114 124 124 PRO PRO A . n A 1 115 GLU 115 125 125 GLU GLU A . n A 1 116 ASP 116 126 126 ASP ASP A . n A 1 117 LYS 117 127 127 LYS LYS A . n A 1 118 ILE 118 128 128 ILE ILE A . n A 1 119 ILE 119 129 129 ILE ILE A . n A 1 120 GLN 120 130 130 GLN GLN A . n A 1 121 VAL 121 131 131 VAL VAL A . n A 1 122 MET 122 132 132 MET MET A . n A 1 123 LYS 123 133 133 LYS LYS A . n A 1 124 GLU 124 134 134 GLU GLU A . n A 1 125 PHE 125 135 135 PHE PHE A . n A 1 126 GLU 126 136 136 GLU GLU A . n A 1 127 GLY 127 137 137 GLY GLY A . n A 1 128 GLU 128 138 138 GLU GLU A . n A 1 129 ILE 129 139 139 ILE ILE A . n A 1 130 ILE 130 140 140 ILE ILE A . n A 1 131 GLN 131 141 141 GLN GLN A . n A 1 132 ARG 132 142 142 ARG ARG A . n A 1 133 PRO 133 143 143 PRO PRO A . n A 1 134 PRO 134 144 144 PRO PRO A . n A 1 135 LEU 135 145 145 LEU LEU A . n A 1 136 ARG 136 146 146 ARG ARG A . n A 1 137 SER 137 147 147 SER SER A . n A 1 138 ALA 138 148 148 ALA ALA A . n A 1 139 VAL 139 149 149 VAL VAL A . n A 1 140 LYS 140 150 150 LYS LYS A . n A 1 141 ARG 141 151 151 ARG ARG A . n A 1 142 ARG 142 152 152 ARG ARG A . n A 1 143 LEU 143 153 153 LEU LEU A . n A 1 144 ARG 144 154 154 ARG ARG A . n A 1 145 THR 145 155 155 THR THR A . n A 1 146 ARG 146 156 156 ARG ARG A . n A 1 147 LYS 147 157 157 LYS LYS A . n A 1 148 VAL 148 158 158 VAL VAL A . n A 1 149 TYR 149 159 159 TYR TYR A . n A 1 150 TYR 150 160 160 TYR TYR A . n A 1 151 ILE 151 161 161 ILE ILE A . n A 1 152 GLU 152 162 162 GLU GLU A . n A 1 153 VAL 153 163 163 VAL VAL A . n A 1 154 LEU 154 164 164 LEU LEU A . n A 1 155 GLU 155 165 165 GLU GLU A . n A 1 156 ILE 156 166 166 ILE ILE A . n A 1 157 GLU 157 167 167 GLU GLU A . n A 1 158 GLY 158 168 168 GLY GLY A . n A 1 159 ARG 159 169 169 ARG ARG A . n A 1 160 ASP 160 170 170 ASP ASP A . n A 1 161 VAL 161 171 171 VAL VAL A . n A 1 162 LEU 162 172 172 LEU LEU A . n A 1 163 PHE 163 173 173 PHE PHE A . n A 1 164 ARG 164 174 174 ARG ARG A . n A 1 165 VAL 165 175 175 VAL VAL A . n A 1 166 GLY 166 176 176 GLY GLY A . n A 1 167 VAL 167 177 177 VAL VAL A . n A 1 168 GLU 168 178 178 GLU GLU A . n A 1 169 ALA 169 179 179 ALA ALA A . n A 1 170 GLY 170 180 180 GLY GLY A . n A 1 171 THR 171 181 181 THR THR A . n A 1 172 TYR 172 182 182 TYR TYR A . n A 1 173 ILE 173 183 183 ILE ILE A . n A 1 174 ARG 174 184 184 ARG ARG A . n A 1 175 SER 175 185 185 SER SER A . n A 1 176 LEU 176 186 186 LEU LEU A . n A 1 177 ILE 177 187 187 ILE ILE A . n A 1 178 HIS 178 188 188 HIS HIS A . n A 1 179 HIS 179 189 189 HIS HIS A . n A 1 180 ILE 180 190 190 ILE ILE A . n A 1 181 GLY 181 191 191 GLY GLY A . n A 1 182 LEU 182 192 192 LEU LEU A . n A 1 183 ALA 183 193 193 ALA ALA A . n A 1 184 LEU 184 194 194 LEU LEU A . n A 1 185 GLY 185 195 195 GLY GLY A . n A 1 186 VAL 186 196 196 VAL VAL A . n A 1 187 GLY 187 197 197 GLY GLY A . n A 1 188 ALA 188 198 198 ALA ALA A . n A 1 189 HIS 189 199 199 HIS HIS A . n A 1 190 MET 190 200 200 MET MET A . n A 1 191 SER 191 201 201 SER SER A . n A 1 192 GLU 192 202 202 GLU GLU A . n A 1 193 LEU 193 203 203 LEU LEU A . n A 1 194 ARG 194 204 204 ARG ARG A . n A 1 195 ARG 195 205 205 ARG ARG A . n A 1 196 THR 196 206 206 THR THR A . n A 1 197 ARG 197 207 207 ARG ARG A . n A 1 198 SER 198 208 208 SER SER A . n A 1 199 GLY 199 209 209 GLY GLY A . n A 1 200 PRO 200 210 210 PRO PRO A . n A 1 201 PHE 201 211 211 PHE PHE A . n A 1 202 LYS 202 212 212 LYS LYS A . n A 1 203 GLU 203 213 213 GLU GLU A . n A 1 204 ASP 204 214 214 ASP ASP A . n A 1 205 GLU 205 215 215 GLU GLU A . n A 1 206 THR 206 216 216 THR THR A . n A 1 207 LEU 207 217 217 LEU LEU A . n A 1 208 ILE 208 218 218 ILE ILE A . n A 1 209 THR 209 219 219 THR THR A . n A 1 210 LEU 210 220 220 LEU LEU A . n A 1 211 HIS 211 221 221 HIS HIS A . n A 1 212 ASP 212 222 222 ASP ASP A . n A 1 213 LEU 213 223 223 LEU LEU A . n A 1 214 VAL 214 224 224 VAL VAL A . n A 1 215 ASP 215 225 225 ASP ASP A . n A 1 216 TYR 216 226 226 TYR TYR A . n A 1 217 TYR 217 227 227 TYR TYR A . n A 1 218 TYR 218 228 228 TYR TYR A . n A 1 219 PHE 219 229 229 PHE PHE A . n A 1 220 TRP 220 230 230 TRP TRP A . n A 1 221 LYS 221 231 231 LYS LYS A . n A 1 222 GLU 222 232 232 GLU GLU A . n A 1 223 ASP 223 233 233 ASP ASP A . n A 1 224 GLY 224 234 234 GLY GLY A . n A 1 225 ILE 225 235 235 ILE ILE A . n A 1 226 GLU 226 236 236 GLU GLU A . n A 1 227 GLU 227 237 237 GLU GLU A . n A 1 228 TYR 228 238 238 TYR TYR A . n A 1 229 PHE 229 239 239 PHE PHE A . n A 1 230 ARG 230 240 240 ARG ARG A . n A 1 231 LYS 231 241 241 LYS LYS A . n A 1 232 ALA 232 242 242 ALA ALA A . n A 1 233 ILE 233 243 243 ILE ILE A . n A 1 234 GLN 234 244 244 GLN GLN A . n A 1 235 PRO 235 245 245 PRO PRO A . n A 1 236 MET 236 246 246 MET MET A . n A 1 237 GLU 237 247 247 GLU GLU A . n A 1 238 LYS 238 248 248 LYS LYS A . n A 1 239 ALA 239 249 249 ALA ALA A . n A 1 240 VAL 240 250 250 VAL VAL A . n A 1 241 GLU 241 251 251 GLU GLU A . n A 1 242 HIS 242 252 252 HIS HIS A . n A 1 243 LEU 243 253 253 LEU LEU A . n A 1 244 PRO 244 254 254 PRO PRO A . n A 1 245 LYS 245 255 255 LYS LYS A . n A 1 246 VAL 246 256 256 VAL VAL A . n A 1 247 TRP 247 257 257 TRP TRP A . n A 1 248 ILE 248 258 258 ILE ILE A . n A 1 249 LYS 249 259 259 LYS LYS A . n A 1 250 ASP 250 260 260 ASP ASP A . n A 1 251 SER 251 261 261 SER SER A . n A 1 252 ALA 252 262 262 ALA ALA A . n A 1 253 VAL 253 263 263 VAL VAL A . n A 1 254 ALA 254 264 264 ALA ALA A . n A 1 255 ALA 255 265 265 ALA ALA A . n A 1 256 VAL 256 266 266 VAL VAL A . n A 1 257 THR 257 267 267 THR THR A . n A 1 258 HIS 258 268 268 HIS HIS A . n A 1 259 GLY 259 269 269 GLY GLY A . n A 1 260 ALA 260 270 270 ALA ALA A . n A 1 261 ASP 261 271 271 ASP ASP A . n A 1 262 LEU 262 272 272 LEU LEU A . n A 1 263 ALA 263 273 273 ALA ALA A . n A 1 264 VAL 264 274 274 VAL VAL A . n A 1 265 PRO 265 275 275 PRO PRO A . n A 1 266 GLY 266 276 276 GLY GLY A . n A 1 267 ILE 267 277 277 ILE ILE A . n A 1 268 ALA 268 278 278 ALA ALA A . n A 1 269 LYS 269 279 279 LYS LYS A . n A 1 270 LEU 270 280 280 LEU LEU A . n A 1 271 HIS 271 281 281 HIS HIS A . n A 1 272 ALA 272 282 282 ALA ALA A . n A 1 273 GLY 273 283 283 GLY GLY A . n A 1 274 ILE 274 284 284 ILE ILE A . n A 1 275 LYS 275 285 285 LYS LYS A . n A 1 276 ARG 276 286 286 ARG ARG A . n A 1 277 GLY 277 287 287 GLY GLY A . n A 1 278 ASP 278 288 288 ASP ASP A . n A 1 279 LEU 279 289 289 LEU LEU A . n A 1 280 VAL 280 290 290 VAL VAL A . n A 1 281 ALA 281 291 291 ALA ALA A . n A 1 282 ILE 282 292 292 ILE ILE A . n A 1 283 MET 283 293 293 MET MET A . n A 1 284 THR 284 294 294 THR THR A . n A 1 285 LEU 285 295 295 LEU LEU A . n A 1 286 LYS 286 296 296 LYS LYS A . n A 1 287 ASP 287 297 297 ASP ASP A . n A 1 288 GLU 288 298 298 GLU GLU A . n A 1 289 LEU 289 299 299 LEU LEU A . n A 1 290 VAL 290 300 300 VAL VAL A . n A 1 291 ALA 291 301 301 ALA ALA A . n A 1 292 LEU 292 302 302 LEU LEU A . n A 1 293 GLY 293 303 303 GLY GLY A . n A 1 294 LYS 294 304 304 LYS LYS A . n A 1 295 ALA 295 305 305 ALA ALA A . n A 1 296 MET 296 306 306 MET MET A . n A 1 297 MET 297 307 307 MET MET A . n A 1 298 THR 298 308 308 THR THR A . n A 1 299 SER 299 309 309 SER SER A . n A 1 300 GLN 300 310 310 GLN GLN A . n A 1 301 GLU 301 311 311 GLU GLU A . n A 1 302 MET 302 312 312 MET MET A . n A 1 303 LEU 303 313 313 LEU LEU A . n A 1 304 GLU 304 314 314 GLU GLU A . n A 1 305 LYS 305 315 315 LYS LYS A . n A 1 306 THR 306 316 316 THR THR A . n A 1 307 LYS 307 317 317 LYS LYS A . n A 1 308 GLY 308 318 318 GLY GLY A . n A 1 309 ILE 309 319 319 ILE ILE A . n A 1 310 ALA 310 320 320 ALA ALA A . n A 1 311 VAL 311 321 321 VAL VAL A . n A 1 312 ASP 312 322 322 ASP ASP A . n A 1 313 VAL 313 323 323 VAL VAL A . n A 1 314 GLU 314 324 324 GLU GLU A . n A 1 315 LYS 315 325 325 LYS LYS A . n A 1 316 VAL 316 326 326 VAL VAL A . n A 1 317 PHE 317 327 327 PHE PHE A . n A 1 318 MET 318 328 328 MET MET A . n A 1 319 PRO 319 329 329 PRO PRO A . n A 1 320 ARG 320 330 330 ARG ARG A . n A 1 321 ASP 321 331 331 ASP ASP A . n A 1 322 TRP 322 332 332 TRP TRP A . n A 1 323 TYR 323 333 333 TYR TYR A . n A 1 324 PRO 324 334 334 PRO PRO A . n A 1 325 LYS 325 335 335 LYS LYS A . n A 1 326 LEU 326 336 336 LEU LEU A . n A 1 327 TRP 327 337 337 TRP TRP A . n A 1 328 GLU 328 338 338 GLU GLU A . n B 2 1 ARG 1 4 4 ARG ARG B . n B 2 2 ILE 2 5 5 ILE ILE B . n B 2 3 ARG 3 6 6 ARG ARG B . n B 2 4 LYS 4 7 7 LYS LYS B . n B 2 5 CYS 5 8 8 CYS CYS B . n B 2 6 PRO 6 9 9 PRO PRO B . n B 2 7 LYS 7 10 10 LYS LYS B . n B 2 8 CYS 8 11 11 CYS CYS B . n B 2 9 GLY 9 12 12 GLY GLY B . n B 2 10 ARG 10 13 13 ARG ARG B . n B 2 11 TYR 11 14 14 TYR TYR B . n B 2 12 THR 12 15 15 THR THR B . n B 2 13 LEU 13 16 16 LEU LEU B . n B 2 14 LYS 14 17 17 LYS LYS B . n B 2 15 GLU 15 18 18 GLU GLU B . n B 2 16 VAL 16 19 19 VAL VAL B . n B 2 17 CYS 17 20 20 CYS CYS B . n B 2 18 PRO 18 21 21 PRO PRO B . n B 2 19 VAL 19 22 22 VAL VAL B . n B 2 20 CYS 20 23 23 CYS CYS B . n B 2 21 GLY 21 24 24 GLY GLY B . n B 2 22 GLU 22 25 25 GLU GLU B . n B 2 23 LYS 23 26 26 LYS LYS B . n B 2 24 THR 24 27 27 THR THR B . n B 2 25 LYS 25 28 28 LYS LYS B . n B 2 26 VAL 26 29 29 VAL VAL B . n B 2 27 ALA 27 30 30 ALA ALA B . n B 2 28 HIS 28 31 31 HIS HIS B . n B 2 29 PRO 29 32 32 PRO PRO B . n B 2 30 PRO 30 33 33 PRO PRO B . n B 2 31 ARG 31 34 34 ARG ARG B . n B 2 32 PHE 32 35 35 PHE PHE B . n B 2 33 SER 33 36 36 SER SER B . n B 2 34 PRO 34 37 37 PRO PRO B . n B 2 35 GLU 35 38 38 GLU GLU B . n B 2 36 ASP 36 39 39 ASP ASP B . n B 2 37 PRO 37 40 40 PRO PRO B . n B 2 38 TYR 38 41 41 TYR TYR B . n B 2 39 GLY 39 42 42 GLY GLY B . n B 2 40 GLU 40 43 43 GLU GLU B . n B 2 41 TYR 41 44 44 TYR TYR B . n B 2 42 ARG 42 45 45 ARG ARG B . n B 2 43 ARG 43 46 46 ARG ARG B . n B 2 44 ARG 44 47 47 ARG ARG B . n B 2 45 TRP 45 48 48 TRP TRP B . n B 2 46 LYS 46 49 49 LYS LYS B . n B 2 47 ARG 47 50 50 ARG ARG B . n B 2 48 GLU 48 51 51 GLU GLU B . n B 2 49 VAL 49 52 52 VAL VAL B . n B 2 50 LEU 50 53 53 LEU LEU B . n B 2 51 GLY 51 54 54 GLY GLY B . n B 2 52 ILE 52 55 55 ILE ILE B . n C 3 1 MET 1 1 1 MET MET C . n C 3 2 LYS 2 2 2 LYS LYS C . n C 3 3 ARG 3 3 3 ARG ARG C . n C 3 4 LEU 4 4 4 LEU LEU C . n C 3 5 GLY 5 5 5 GLY GLY C . n C 3 6 LYS 6 6 6 LYS LYS C . n C 3 7 VAL 7 7 7 VAL VAL C . n C 3 8 LEU 8 8 8 LEU LEU C . n C 3 9 HIS 9 9 9 HIS HIS C . n C 3 10 TYR 10 10 10 TYR TYR C . n C 3 11 ALA 11 11 11 ALA ALA C . n C 3 12 LYS 12 12 12 LYS LYS C . n C 3 13 GLN 13 13 13 GLN GLN C . n C 3 14 GLY 14 14 14 GLY GLY C . n C 3 15 PHE 15 15 15 PHE PHE C . n C 3 16 LEU 16 16 16 LEU LEU C . n C 3 17 ILE 17 17 17 ILE ILE C . n C 3 18 VAL 18 18 18 VAL VAL C . n C 3 19 ARG 19 19 19 ARG ARG C . n C 3 20 THR 20 20 20 THR THR C . n C 3 21 ASN 21 21 21 ASN ASN C . n C 3 22 TRP 22 22 22 TRP TRP C . n C 3 23 VAL 23 23 23 VAL VAL C . n C 3 24 PRO 24 24 24 PRO PRO C . n C 3 25 SER 25 25 25 SER SER C . n C 3 26 LEU 26 26 26 LEU LEU C . n C 3 27 ASN 27 27 27 ASN ASN C . n C 3 28 ASP 28 28 28 ASP ASP C . n C 3 29 ARG 29 29 29 ARG ARG C . n C 3 30 VAL 30 30 30 VAL VAL C . n C 3 31 VAL 31 31 31 VAL VAL C . n C 3 32 ASP 32 32 32 ASP ASP C . n C 3 33 LYS 33 33 33 LYS LYS C . n C 3 34 ARG 34 34 34 ARG ARG C . n C 3 35 LEU 35 35 35 LEU LEU C . n C 3 36 GLN 36 36 36 GLN GLN C . n C 3 37 PHE 37 37 37 PHE PHE C . n C 3 38 VAL 38 38 38 VAL VAL C . n C 3 39 GLY 39 39 39 GLY GLY C . n C 3 40 ILE 40 40 40 ILE ILE C . n C 3 41 VAL 41 41 41 VAL VAL C . n C 3 42 LYS 42 42 42 LYS LYS C . n C 3 43 ASP 43 43 43 ASP ASP C . n C 3 44 VAL 44 44 44 VAL VAL C . n C 3 45 PHE 45 45 45 PHE PHE C . n C 3 46 GLY 46 46 46 GLY GLY C . n C 3 47 PRO 47 47 47 PRO PRO C . n C 3 48 VAL 48 48 48 VAL VAL C . n C 3 49 LYS 49 49 49 LYS LYS C . n C 3 50 MET 50 50 50 MET MET C . n C 3 51 PRO 51 51 51 PRO PRO C . n C 3 52 TYR 52 52 52 TYR TYR C . n C 3 53 VAL 53 53 53 VAL VAL C . n C 3 54 ALA 54 54 54 ALA ALA C . n C 3 55 ILE 55 55 55 ILE ILE C . n C 3 56 LYS 56 56 56 LYS LYS C . n C 3 57 PRO 57 57 57 PRO PRO C . n C 3 58 LYS 58 58 58 LYS LYS C . n C 3 59 VAL 59 59 59 VAL VAL C . n C 3 60 SER 60 60 60 SER SER C . n C 3 61 ASN 61 61 61 ASN ASN C . n C 3 62 PRO 62 62 62 PRO PRO C . n C 3 63 GLU 63 63 63 GLU GLU C . n C 3 64 ILE 64 64 64 ILE ILE C . n C 3 65 TYR 65 65 65 TYR TYR C . n C 3 66 VAL 66 66 66 VAL VAL C . n C 3 67 GLY 67 67 67 GLY GLY C . n C 3 68 GLU 68 68 68 GLU GLU C . n C 3 69 VAL 69 69 69 VAL VAL C . n C 3 70 LEU 70 70 70 LEU LEU C . n C 3 71 TYR 71 71 71 TYR TYR C . n C 3 72 VAL 72 72 72 VAL VAL C . n C 3 73 ASP 73 73 73 ASP ASP C . n C 3 74 GLU 74 74 74 GLU GLU C . n C 3 75 ARG 75 75 75 ARG ARG C . n D 4 1 G 1 5 5 G G D . n D 4 2 U 2 6 6 U U D . n D 4 3 U 3 7 7 U U D . n D 4 4 C 4 8 8 C C D . n D 4 5 G 5 9 9 G G D . n D 4 6 A 6 10 10 A A D . n D 4 7 U 7 11 11 U U D . n D 4 8 C 8 12 12 C C D . n D 4 9 C 9 13 13 C C D . n D 4 10 A 10 14 14 A A D . n D 4 11 C 11 15 15 C C D . n D 4 12 A 12 16 16 A A D . n D 4 13 G 13 17 17 G G D . n E 5 1 C 1 8 8 C C E . n E 5 2 G 2 9 9 G G E . n E 5 3 A 3 10 10 A A E . n E 5 4 U 4 11 11 U U E . n E 5 5 C 5 12 12 C C E . n E 5 6 C 6 13 13 C C E . n E 5 7 A 7 14 14 A A E . n E 5 8 C 8 15 15 C C E . n E 5 9 A 9 16 16 A A E . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7180 ? 1 MORE -37 ? 1 'SSA (A^2)' 24730 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_dist_value' 4 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 5 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -12.2349 _pdbx_refine_tls.origin_y 35.5660 _pdbx_refine_tls.origin_z -8.2205 _pdbx_refine_tls.T[1][1] 0.1983 _pdbx_refine_tls.T[2][2] 0.2657 _pdbx_refine_tls.T[3][3] 0.2436 _pdbx_refine_tls.T[1][2] -0.0928 _pdbx_refine_tls.T[1][3] -0.0153 _pdbx_refine_tls.T[2][3] -0.1741 _pdbx_refine_tls.L[1][1] 1.7596 _pdbx_refine_tls.L[2][2] 1.2147 _pdbx_refine_tls.L[3][3] 1.2551 _pdbx_refine_tls.L[1][2] -0.9998 _pdbx_refine_tls.L[1][3] -0.6276 _pdbx_refine_tls.L[2][3] 0.6707 _pdbx_refine_tls.S[1][1] -0.1127 _pdbx_refine_tls.S[1][2] 0.0895 _pdbx_refine_tls.S[1][3] -0.2148 _pdbx_refine_tls.S[2][1] -0.0320 _pdbx_refine_tls.S[2][2] 0.0182 _pdbx_refine_tls.S[2][3] 0.0709 _pdbx_refine_tls.S[3][1] 0.0377 _pdbx_refine_tls.S[3][2] -0.1137 _pdbx_refine_tls.S[3][3] 0.1127 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 PHENIX refinement '(phenix.refine)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 204 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 213 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_1 D _pdbx_validate_rmsd_angle.auth_comp_id_1 G _pdbx_validate_rmsd_angle.auth_seq_id_1 5 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C2'" _pdbx_validate_rmsd_angle.auth_asym_id_2 D _pdbx_validate_rmsd_angle.auth_comp_id_2 G _pdbx_validate_rmsd_angle.auth_seq_id_2 5 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_3 D _pdbx_validate_rmsd_angle.auth_comp_id_3 G _pdbx_validate_rmsd_angle.auth_seq_id_3 5 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 106.36 _pdbx_validate_rmsd_angle.angle_target_value 101.50 _pdbx_validate_rmsd_angle.angle_deviation 4.86 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.80 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 16 ? ? -43.02 -16.63 2 1 PHE A 36 ? ? -164.17 104.71 3 1 LYS A 40 ? ? -93.67 51.31 4 1 GLU A 97 ? ? 49.38 -122.23 5 1 GLN A 141 ? ? -95.69 -78.71 6 1 ARG A 146 ? ? -24.61 115.36 7 1 LYS A 150 ? ? -55.04 109.08 8 1 LYS B 10 ? ? -95.71 -61.56 9 1 CYS B 20 ? ? -37.04 112.63 10 1 ASN C 27 ? ? 82.76 10.29 11 1 LEU C 35 ? ? 89.09 13.43 12 1 LYS C 58 ? ? -92.77 32.20 13 1 GLU C 63 ? ? -55.10 -5.44 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3MQK 'double helix' 3MQK 'a-form double helix' 3MQK 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D U 3 1_555 D U 2 1_555 -1.994 -0.236 1.852 -50.685 24.422 75.993 1 D_U7:U6_D D 7 ? D 6 ? ? ? 1 D C 4 1_555 E A 7 1_555 -1.343 -0.027 -1.950 42.863 -34.514 19.687 2 D_C8:A14_E D 8 ? E 14 ? ? 1 1 D G 5 1_555 E C 5 1_555 -0.790 0.069 -0.332 7.322 -3.284 -4.052 3 D_G9:C12_E D 9 ? E 12 ? 19 1 1 D A 6 1_555 E U 4 1_555 0.159 0.159 0.164 -12.618 -16.351 6.339 4 D_A10:U11_E D 10 ? E 11 ? 20 1 1 D U 7 1_555 E A 3 1_555 -0.168 -0.294 0.061 -9.587 -12.605 -7.651 5 D_U11:A10_E D 11 ? E 10 ? 20 1 1 D C 8 1_555 E G 2 1_555 1.214 -0.244 0.021 -2.347 -12.478 -4.130 6 D_C12:G9_E D 12 ? E 9 ? 19 1 1 D C 9 1_555 E C 1 1_555 1.980 -1.519 0.378 -4.382 -22.143 -2.160 7 D_C13:C8_E D 13 ? E 8 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D U 3 1_555 D U 2 1_555 D C 4 1_555 E A 7 1_555 -2.376 3.949 3.282 -54.525 54.741 13.183 -0.738 -1.969 4.997 57.974 57.746 78.206 1 DD_U7C8:A14U6_ED D 7 ? D 6 ? D 8 ? E 14 ? 1 D C 4 1_555 E A 7 1_555 D G 5 1_555 E C 5 1_555 0.517 -1.774 6.188 -55.307 41.919 45.700 -3.382 -3.066 2.489 36.674 48.387 81.488 2 DD_C8G9:C12A14_EE D 8 ? E 14 ? D 9 ? E 12 ? 1 D G 5 1_555 E C 5 1_555 D A 6 1_555 E U 4 1_555 0.265 -1.739 3.913 -1.033 0.241 42.743 -2.414 -0.487 3.897 0.330 1.417 42.755 3 DD_G9A10:U11C12_EE D 9 ? E 12 ? D 10 ? E 11 ? 1 D A 6 1_555 E U 4 1_555 D U 7 1_555 E A 3 1_555 -0.369 -1.755 3.116 2.884 8.208 27.415 -5.141 1.307 2.447 16.792 -5.900 28.737 4 DD_A10U11:A10U11_EE D 10 ? E 11 ? D 11 ? E 10 ? 1 D U 7 1_555 E A 3 1_555 D C 8 1_555 E G 2 1_555 0.947 -1.201 3.077 2.530 3.341 36.487 -2.334 -1.181 3.016 5.314 -4.024 36.719 5 DD_U11C12:G9A10_EE D 11 ? E 10 ? D 12 ? E 9 ? 1 D C 8 1_555 E G 2 1_555 D C 9 1_555 E C 1 1_555 0.158 -1.377 3.272 0.435 9.462 39.920 -2.953 -0.181 2.887 13.627 -0.626 40.983 6 DD_C12C13:C8G9_EE D 12 ? E 9 ? D 13 ? E 8 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2EY4 _pdbx_initial_refinement_model.details 'PDB entry 2EY4' #