HEADER CONTRACTILE PROTEIN 02-MAY-10 3MUD TITLE STRUCTURE OF THE TROPOMYOSIN OVERLAP COMPLEX FROM CHICKEN SMOOTH TITLE 2 MUSCLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA REPAIR PROTEIN XRCC4,TROPOMYOSIN ALPHA-1 CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 4,ALPHA- COMPND 5 TROPOMYOSIN,TROPOMYOSIN-1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TROPOMYOSIN ALPHA-1 CHAIN,MICROTUBULE-ASSOCIATED PROTEIN COMPND 10 RP/EB FAMILY MEMBER 1; COMPND 11 CHAIN: C, D; COMPND 12 SYNONYM: ALPHA-TROPOMYOSIN,TROPOMYOSIN-1,APC-BINDING PROTEIN EB1,END- COMPND 13 BINDING PROTEIN 1,EB1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: HUMAN, CHICKEN; SOURCE 4 ORGANISM_TAXID: 9606, 9031; SOURCE 5 GENE: XRCC4, TPM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)/PRIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET31B; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: TPM1, C15ORF13, TMSA, MAPRE1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)/PRIL; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET31B KEYWDS TROPOMYSOIN, OVERLAP COMPLEX, COILED-COILS, CONTRACTILE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.A.KLENCHIN,J.FRYE,I.RAYMENT REVDAT 3 06-SEP-23 3MUD 1 REMARK REVDAT 2 31-MAY-17 3MUD 1 COMPND REMARK DBREF REVDAT 1 23-JUN-10 3MUD 0 JRNL AUTH J.FRYE,V.A.KLENCHIN,I.RAYMENT JRNL TITL STRUCTURE OF THE TROPOMYOSIN OVERLAP COMPLEX FROM CHICKEN JRNL TITL 2 SMOOTH MUSCLE: INSIGHT INTO THE DIVERSITY OF N-TERMINAL JRNL TITL 3 RECOGNITION . JRNL REF BIOCHEMISTRY V. 49 4908 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20465283 JRNL DOI 10.1021/BI100349A REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 37461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1982 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2694 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 144 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3421 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 398 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.82000 REMARK 3 B22 (A**2) : 0.82000 REMARK 3 B33 (A**2) : -1.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.193 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.660 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3485 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4677 ; 1.016 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 431 ; 4.586 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 169 ;34.902 ;25.740 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 660 ;15.184 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;14.225 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 515 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2587 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2152 ; 3.702 ; 5.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3434 ; 6.023 ;50.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1333 ; 6.787 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1242 ;10.197 ;70.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 0 REMARK 3 RESIDUE RANGE : A 2 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): -5.1634 -3.2071 -22.1735 REMARK 3 T TENSOR REMARK 3 T11: 0.0810 T22: 0.1281 REMARK 3 T33: 0.0739 T12: 0.0149 REMARK 3 T13: 0.0262 T23: -0.0522 REMARK 3 L TENSOR REMARK 3 L11: 1.9416 L22: 2.8587 REMARK 3 L33: 2.9708 L12: 1.0860 REMARK 3 L13: 0.5091 L23: 1.2307 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: -0.1261 S13: 0.0193 REMARK 3 S21: 0.1942 S22: 0.1189 S23: 0.0786 REMARK 3 S31: 0.0871 S32: 0.2382 S33: -0.1011 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 114 A 135 REMARK 3 RESIDUE RANGE : A 248 A 284 REMARK 3 ORIGIN FOR THE GROUP (A): -32.5298 -22.8126 -14.5423 REMARK 3 T TENSOR REMARK 3 T11: 0.2495 T22: 0.2178 REMARK 3 T33: 0.1694 T12: -0.0743 REMARK 3 T13: 0.0341 T23: -0.0897 REMARK 3 L TENSOR REMARK 3 L11: 4.9680 L22: 0.7229 REMARK 3 L33: 4.9300 L12: 1.6993 REMARK 3 L13: -4.8633 L23: -1.8036 REMARK 3 S TENSOR REMARK 3 S11: 0.0704 S12: -0.2121 S13: 0.1216 REMARK 3 S21: 0.0046 S22: -0.0036 S23: 0.0116 REMARK 3 S31: 0.0181 S32: 0.1705 S33: -0.0668 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 0 REMARK 3 RESIDUE RANGE : B 2 B 90 REMARK 3 ORIGIN FOR THE GROUP (A): -32.7244 -19.2933 -43.3288 REMARK 3 T TENSOR REMARK 3 T11: 0.1032 T22: 0.1251 REMARK 3 T33: 0.2241 T12: -0.0241 REMARK 3 T13: -0.0805 T23: -0.0762 REMARK 3 L TENSOR REMARK 3 L11: 5.0175 L22: 4.7851 REMARK 3 L33: 2.5106 L12: 3.3722 REMARK 3 L13: 2.0774 L23: 2.0623 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: -0.0935 S13: 0.2635 REMARK 3 S21: -0.1651 S22: -0.2995 S23: 0.7389 REMARK 3 S31: 0.0849 S32: -0.3549 S33: 0.2633 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 91 B 135 REMARK 3 RESIDUE RANGE : B 248 B 284 REMARK 3 ORIGIN FOR THE GROUP (A): -31.2127 -18.6119 -23.8622 REMARK 3 T TENSOR REMARK 3 T11: 0.1916 T22: 0.1725 REMARK 3 T33: 0.2585 T12: -0.0504 REMARK 3 T13: -0.0531 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 1.3196 L22: 1.1357 REMARK 3 L33: 0.3484 L12: 1.0141 REMARK 3 L13: -0.6568 L23: -0.5698 REMARK 3 S TENSOR REMARK 3 S11: 0.2169 S12: -0.2370 S13: 0.1114 REMARK 3 S21: 0.1666 S22: -0.1316 S23: 0.2160 REMARK 3 S31: -0.1355 S32: 0.1334 S33: -0.0853 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -2 C 29 REMARK 3 RESIDUE RANGE : C 215 C 230 REMARK 3 ORIGIN FOR THE GROUP (A): -61.9317 -38.4481 29.6862 REMARK 3 T TENSOR REMARK 3 T11: 0.3226 T22: 0.2315 REMARK 3 T33: 0.1419 T12: 0.0796 REMARK 3 T13: 0.1813 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 5.6455 L22: 7.7124 REMARK 3 L33: 11.0947 L12: 4.1258 REMARK 3 L13: -5.9088 L23: -6.3392 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: -0.4098 S13: -0.1147 REMARK 3 S21: 1.1393 S22: 0.0273 S23: 0.5496 REMARK 3 S31: -0.7381 S32: -0.3606 S33: -0.0663 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D -2 D 29 REMARK 3 RESIDUE RANGE : D 215 D 230 REMARK 3 ORIGIN FOR THE GROUP (A): -65.3004 -44.2855 25.8142 REMARK 3 T TENSOR REMARK 3 T11: 0.2843 T22: 0.2516 REMARK 3 T33: 0.3215 T12: 0.0489 REMARK 3 T13: 0.2395 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 5.8037 L22: 4.3764 REMARK 3 L33: 6.5203 L12: 2.2625 REMARK 3 L13: -3.2463 L23: -1.9787 REMARK 3 S TENSOR REMARK 3 S11: -0.1539 S12: -0.1720 S13: -0.1509 REMARK 3 S21: 0.6894 S22: 0.1339 S23: 0.8206 REMARK 3 S31: 0.1589 S32: -0.8254 S33: 0.0200 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MUD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39647 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 18.60 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 49.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 17.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1FU1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% MEPEG 2000, 100 MM BIS-TRIS, 120 REMARK 280 MM MGSO4 , PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.49650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.28200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.28200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.74825 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.28200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.28200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 122.24475 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.28200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.28200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.74825 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.28200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.28200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 122.24475 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.49650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 GLY A -2 REMARK 465 GLY B -3 REMARK 465 GLY B -2 REMARK 465 MET B 284 REMARK 465 ILE C 224 REMARK 465 GLU C 225 REMARK 465 LEU C 226 REMARK 465 ILE C 227 REMARK 465 CYS C 228 REMARK 465 GLN C 229 REMARK 465 GLU C 230 REMARK 465 ASN C 231 REMARK 465 GLU C 232 REMARK 465 GLY C 233 REMARK 465 GLU C 234 REMARK 465 ASN C 235 REMARK 465 ASP C 236 REMARK 465 PRO C 237 REMARK 465 VAL C 238 REMARK 465 LEU C 239 REMARK 465 GLN C 240 REMARK 465 ARG C 241 REMARK 465 ILE C 242 REMARK 465 VAL C 243 REMARK 465 ASP C 244 REMARK 465 ILE C 245 REMARK 465 LEU C 246 REMARK 465 TYR C 247 REMARK 465 ALA C 248 REMARK 465 THR C 249 REMARK 465 ASP C 250 REMARK 465 GLU C 251 REMARK 465 GLY C 252 REMARK 465 PHE C 253 REMARK 465 VAL C 254 REMARK 465 ILE C 255 REMARK 465 PRO C 256 REMARK 465 ASP C 257 REMARK 465 ASN D 231 REMARK 465 GLU D 232 REMARK 465 GLY D 233 REMARK 465 GLU D 234 REMARK 465 ASN D 235 REMARK 465 ASP D 236 REMARK 465 PRO D 237 REMARK 465 VAL D 238 REMARK 465 LEU D 239 REMARK 465 GLN D 240 REMARK 465 ARG D 241 REMARK 465 ILE D 242 REMARK 465 VAL D 243 REMARK 465 ASP D 244 REMARK 465 ILE D 245 REMARK 465 LEU D 246 REMARK 465 TYR D 247 REMARK 465 ALA D 248 REMARK 465 THR D 249 REMARK 465 ASP D 250 REMARK 465 GLU D 251 REMARK 465 GLY D 252 REMARK 465 PHE D 253 REMARK 465 VAL D 254 REMARK 465 ILE D 255 REMARK 465 PRO D 256 REMARK 465 ASP D 257 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 LYS B 259 NZ REMARK 470 ASN C 223 CB CG OD1 ND2 REMARK 470 LYS D 220 CG CD CE NZ REMARK 470 ARG D 222 CG CD NE CZ NH1 NH2 REMARK 470 ILE D 224 CG1 CG2 CD1 REMARK 470 GLU D 225 CD OE1 OE2 REMARK 470 ILE D 227 CG1 CG2 CD1 REMARK 470 GLN D 229 CD OE1 NE2 REMARK 470 GLU D 230 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 107 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 26 -47.92 -131.55 REMARK 500 HIS A 40 -51.20 -135.63 REMARK 500 ASN A 118 53.69 -118.29 REMARK 500 GLU B 13 71.35 -115.87 REMARK 500 GLU B 25 -63.22 -91.69 REMARK 500 HIS B 40 -53.96 -122.36 REMARK 500 ASN B 118 62.51 -117.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 387 DISTANCE = 6.09 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 259 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MTU RELATED DB: PDB REMARK 900 RELATED ID: 2G9J RELATED DB: PDB DBREF 3MUD A 2 249 UNP Q13426 XRCC4_HUMAN 2 137 DBREF 3MUD A 250 284 UNP P04268 TPM1_CHICK 250 284 DBREF 3MUD B 2 249 UNP Q13426 XRCC4_HUMAN 2 137 DBREF 3MUD B 250 284 UNP P04268 TPM1_CHICK 250 284 DBREF 3MUD C 1 29 UNP P09493 TPM1_HUMAN 1 29 DBREF 3MUD C 215 257 UNP Q15691 MARE1_HUMAN 215 257 DBREF 3MUD D 1 29 UNP P09493 TPM1_HUMAN 1 29 DBREF 3MUD D 215 257 UNP Q15691 MARE1_HUMAN 215 257 SEQADV 3MUD GLY A -3 UNP Q13426 EXPRESSION TAG SEQADV 3MUD GLY A -2 UNP Q13426 EXPRESSION TAG SEQADV 3MUD SER A -1 UNP Q13426 EXPRESSION TAG SEQADV 3MUD GLY A 0 UNP Q13426 EXPRESSION TAG SEQADV 3MUD THR A 134 UNP Q13426 ILE 134 ENGINEERED MUTATION SEQADV 3MUD LYS A 248 UNP Q13426 GLU 136 CONFLICT SEQADV 3MUD GLY B -3 UNP Q13426 EXPRESSION TAG SEQADV 3MUD GLY B -2 UNP Q13426 EXPRESSION TAG SEQADV 3MUD SER B -1 UNP Q13426 EXPRESSION TAG SEQADV 3MUD GLY B 0 UNP Q13426 EXPRESSION TAG SEQADV 3MUD THR B 134 UNP Q13426 ILE 134 ENGINEERED MUTATION SEQADV 3MUD LYS B 248 UNP Q13426 GLU 136 CONFLICT SEQADV 3MUD GLY C -2 UNP P09493 EXPRESSION TAG SEQADV 3MUD ALA C -1 UNP P09493 EXPRESSION TAG SEQADV 3MUD SER C 0 UNP P09493 EXPRESSION TAG SEQADV 3MUD GLY D -2 UNP P09493 EXPRESSION TAG SEQADV 3MUD ALA D -1 UNP P09493 EXPRESSION TAG SEQADV 3MUD SER D 0 UNP P09493 EXPRESSION TAG SEQRES 1 A 175 GLY GLY SER GLY GLU ARG LYS ILE SER ARG ILE HIS LEU SEQRES 2 A 175 VAL SER GLU PRO SER ILE THR HIS PHE LEU GLN VAL SER SEQRES 3 A 175 TRP GLU LYS THR LEU GLU SER GLY PHE VAL ILE THR LEU SEQRES 4 A 175 THR ASP GLY HIS SER ALA TRP THR GLY THR VAL SER GLU SEQRES 5 A 175 SER GLU ILE SER GLN GLU ALA ASP ASP MET ALA MET GLU SEQRES 6 A 175 LYS GLY LYS TYR VAL GLY GLU LEU ARG LYS ALA LEU LEU SEQRES 7 A 175 SER GLY ALA GLY PRO ALA ASP VAL TYR THR PHE ASN PHE SEQRES 8 A 175 SER LYS GLU SER CYS TYR PHE PHE PHE GLU LYS ASN LEU SEQRES 9 A 175 LYS ASP VAL SER PHE ARG LEU GLY SER PHE ASN LEU GLU SEQRES 10 A 175 LYS VAL GLU ASN PRO ALA GLU VAL ILE ARG GLU LEU ILE SEQRES 11 A 175 CYS TYR CYS LEU ASP THR THR ALA LYS ASN GLU LYS SER SEQRES 12 A 175 ILE ASP ASP LEU GLU GLU LYS VAL ALA HIS ALA LYS GLU SEQRES 13 A 175 GLU ASN LEU ASN MET HIS GLN MET LEU ASP GLN THR LEU SEQRES 14 A 175 LEU GLU LEU ASN ASN MET SEQRES 1 B 175 GLY GLY SER GLY GLU ARG LYS ILE SER ARG ILE HIS LEU SEQRES 2 B 175 VAL SER GLU PRO SER ILE THR HIS PHE LEU GLN VAL SER SEQRES 3 B 175 TRP GLU LYS THR LEU GLU SER GLY PHE VAL ILE THR LEU SEQRES 4 B 175 THR ASP GLY HIS SER ALA TRP THR GLY THR VAL SER GLU SEQRES 5 B 175 SER GLU ILE SER GLN GLU ALA ASP ASP MET ALA MET GLU SEQRES 6 B 175 LYS GLY LYS TYR VAL GLY GLU LEU ARG LYS ALA LEU LEU SEQRES 7 B 175 SER GLY ALA GLY PRO ALA ASP VAL TYR THR PHE ASN PHE SEQRES 8 B 175 SER LYS GLU SER CYS TYR PHE PHE PHE GLU LYS ASN LEU SEQRES 9 B 175 LYS ASP VAL SER PHE ARG LEU GLY SER PHE ASN LEU GLU SEQRES 10 B 175 LYS VAL GLU ASN PRO ALA GLU VAL ILE ARG GLU LEU ILE SEQRES 11 B 175 CYS TYR CYS LEU ASP THR THR ALA LYS ASN GLU LYS SER SEQRES 12 B 175 ILE ASP ASP LEU GLU GLU LYS VAL ALA HIS ALA LYS GLU SEQRES 13 B 175 GLU ASN LEU ASN MET HIS GLN MET LEU ASP GLN THR LEU SEQRES 14 B 175 LEU GLU LEU ASN ASN MET SEQRES 1 C 75 GLY ALA SER MET ASP ALA ILE LYS LYS LYS MET GLN MET SEQRES 2 C 75 LEU LYS LEU ASP LYS GLU ASN ALA LEU ASP ARG ALA GLU SEQRES 3 C 75 GLN ALA GLU ALA ASP LYS ASP PHE TYR PHE GLY LYS LEU SEQRES 4 C 75 ARG ASN ILE GLU LEU ILE CYS GLN GLU ASN GLU GLY GLU SEQRES 5 C 75 ASN ASP PRO VAL LEU GLN ARG ILE VAL ASP ILE LEU TYR SEQRES 6 C 75 ALA THR ASP GLU GLY PHE VAL ILE PRO ASP SEQRES 1 D 75 GLY ALA SER MET ASP ALA ILE LYS LYS LYS MET GLN MET SEQRES 2 D 75 LEU LYS LEU ASP LYS GLU ASN ALA LEU ASP ARG ALA GLU SEQRES 3 D 75 GLN ALA GLU ALA ASP LYS ASP PHE TYR PHE GLY LYS LEU SEQRES 4 D 75 ARG ASN ILE GLU LEU ILE CYS GLN GLU ASN GLU GLY GLU SEQRES 5 D 75 ASN ASP PRO VAL LEU GLN ARG ILE VAL ASP ILE LEU TYR SEQRES 6 D 75 ALA THR ASP GLU GLY PHE VAL ILE PRO ASP HET EDO D 258 4 HET SO4 D 259 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO C2 H6 O2 FORMUL 6 SO4 O4 S 2- FORMUL 7 HOH *398(H2 O) HELIX 1 1 THR A 27 GLU A 29 5 3 HELIX 2 2 GLU A 49 MET A 59 1 11 HELIX 3 3 GLU A 62 LEU A 75 1 14 HELIX 4 4 ASN A 118 ASN A 283 1 54 HELIX 5 5 THR B 27 GLU B 29 5 3 HELIX 6 6 GLU B 49 ALA B 60 1 12 HELIX 7 7 GLU B 62 LEU B 75 1 14 HELIX 8 8 ASN B 118 ASN B 283 1 54 HELIX 9 9 GLY C -2 ASN C 223 1 41 HELIX 10 10 GLY D -2 GLN D 229 1 47 SHEET 1 A 5 GLU A 2 LEU A 10 0 SHEET 2 A 5 GLU A 13 TRP A 24 -1 O LEU A 20 N SER A 6 SHEET 3 A 5 GLY A 31 THR A 37 -1 O THR A 35 N GLN A 21 SHEET 4 A 5 ALA A 42 SER A 48 -1 O VAL A 47 N PHE A 32 SHEET 5 A 5 GLU A 114 LYS A 115 -1 O GLU A 114 N THR A 44 SHEET 1 B 3 TYR A 84 PHE A 88 0 SHEET 2 B 3 TYR A 94 ASN A 100 -1 O PHE A 96 N ASN A 87 SHEET 3 B 3 SER A 105 ASN A 112 -1 O PHE A 111 N PHE A 95 SHEET 1 C 5 GLU B 2 ILE B 8 0 SHEET 2 C 5 HIS B 18 TRP B 24 -1 O LEU B 20 N SER B 6 SHEET 3 C 5 GLY B 31 THR B 37 -1 O THR B 35 N GLN B 21 SHEET 4 C 5 ALA B 42 SER B 48 -1 O TRP B 43 N LEU B 36 SHEET 5 C 5 GLU B 114 LYS B 115 -1 O GLU B 114 N THR B 44 SHEET 1 D 3 VAL B 83 SER B 89 0 SHEET 2 D 3 TYR B 94 ASN B 100 -1 O ASN B 100 N VAL B 83 SHEET 3 D 3 SER B 105 ASN B 112 -1 O PHE B 111 N PHE B 95 SITE 1 AC1 3 GLU A 98 SER A 105 ASN D 17 SITE 1 AC2 7 HIS B 271 LEU B 274 GLY D -2 ALA D -1 SITE 2 AC2 7 SER D 0 MET D 1 HOH D 393 CRYST1 96.564 96.564 162.993 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010356 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010356 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006135 0.00000