data_3N4W # _entry.id 3N4W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3N4W pdb_00003n4w 10.2210/pdb3n4w/pdb RCSB RCSB059383 ? ? WWPDB D_1000059383 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2QT7 'STRUCTURE OF R-PTP-N 468-558' unspecified PDB 3N0I 'STRUCTURE OF R-PTP-N 470-558' unspecified # _pdbx_database_status.entry_id 3N4W _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-05-23 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Primo, M.E.' 1 'Jakoncic, J.' 2 'Poskus, E.' 3 'Ermacora, M.R.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of the mature ectodomain of the human receptor-type protein-tyrosine phosphatase IA-2.' J.Biol.Chem. 283 4674 4681 2008 JBCHA3 US 0021-9258 0071 ? 18048354 10.1074/jbc.M708144200 1 'Structure of the mature ectodomain of the human receptor-type protein-tyrosine phosphatase IA-2' J.Biol.Chem. 283 4674 4681 2008 JBCHA3 US 0021-9258 0071 ? 18048354 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Primo, M.E.' 1 ? primary 'Klinke, S.' 2 ? primary 'Sica, M.P.' 3 ? primary 'Goldbaum, F.A.' 4 ? primary 'Jakoncic, J.' 5 ? primary 'Poskus, E.' 6 ? primary 'Ermacora, M.R.' 7 ? 1 'Primo, M.E.' 8 ? 1 'Klinke, S.' 9 ? 1 'Sica, M.P.' 10 ? 1 'Goldbaum, F.A.' 11 ? 1 'Jakoncic, J.' 12 ? 1 'Poskus, E.' 13 ? 1 'Ermacora, M.R.' 14 ? # _cell.length_a 31.472 _cell.length_b 66.016 _cell.length_c 73.650 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3N4W _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3N4W _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Receptor-type tyrosine-protein phosphatase-like N' 9621.916 2 ? S508A 'UNP residues 470-558' ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 water nat water 18.015 140 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'R-PTP-N, PTP IA-2, Islet cell antigen 512, ICA 512, Islet cell autoantigen 3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINIAVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQI LQTGVGQRE ; _entity_poly.pdbx_seq_one_letter_code_can ;EYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINIAVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQI LQTGVGQRE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 TYR n 1 3 GLY n 1 4 TYR n 1 5 ILE n 1 6 VAL n 1 7 THR n 1 8 ASP n 1 9 GLN n 1 10 LYS n 1 11 PRO n 1 12 LEU n 1 13 SER n 1 14 LEU n 1 15 ALA n 1 16 ALA n 1 17 GLY n 1 18 VAL n 1 19 LYS n 1 20 LEU n 1 21 LEU n 1 22 GLU n 1 23 ILE n 1 24 LEU n 1 25 ALA n 1 26 GLU n 1 27 HIS n 1 28 VAL n 1 29 HIS n 1 30 MET n 1 31 SER n 1 32 SER n 1 33 GLY n 1 34 SER n 1 35 PHE n 1 36 ILE n 1 37 ASN n 1 38 ILE n 1 39 ALA n 1 40 VAL n 1 41 VAL n 1 42 GLY n 1 43 PRO n 1 44 ALA n 1 45 LEU n 1 46 THR n 1 47 PHE n 1 48 ARG n 1 49 ILE n 1 50 ARG n 1 51 HIS n 1 52 ASN n 1 53 GLU n 1 54 GLN n 1 55 ASN n 1 56 LEU n 1 57 SER n 1 58 LEU n 1 59 ALA n 1 60 ASP n 1 61 VAL n 1 62 THR n 1 63 GLN n 1 64 GLN n 1 65 ALA n 1 66 GLY n 1 67 LEU n 1 68 VAL n 1 69 LYS n 1 70 SER n 1 71 GLU n 1 72 LEU n 1 73 GLU n 1 74 ALA n 1 75 GLN n 1 76 THR n 1 77 GLY n 1 78 LEU n 1 79 GLN n 1 80 ILE n 1 81 LEU n 1 82 GLN n 1 83 THR n 1 84 GLY n 1 85 VAL n 1 86 GLY n 1 87 GLN n 1 88 ARG n 1 89 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ICA3, ICA512, PTPRN' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)PLYSS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET9B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTPRN_HUMAN _struct_ref.pdbx_db_accession Q16849 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQI LQTGVGQRE ; _struct_ref.pdbx_align_begin 470 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3N4W A 1 ? 89 ? Q16849 470 ? 558 ? 470 558 2 1 3N4W B 1 ? 89 ? Q16849 470 ? 558 ? 470 558 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3N4W ALA A 39 ? UNP Q16849 SER 508 'engineered mutation' 508 1 2 3N4W ALA B 39 ? UNP Q16849 SER 508 'engineered mutation' 508 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3N4W _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.020 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 39.200 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.500000 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.pdbx_details '30% (W/V) PEG 4000, 0.1 M HEPES PH 7.5, 0.2 M CACL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE, temperature 292K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.000000 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.pdbx_collection_date 2010-02-14 _diffrn_detector.details 'TOROIDAL FOCUSING MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'SI (111) CHANNEL CUT MONOCHROMATOR' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0332 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X6A' _diffrn_source.pdbx_wavelength_list 1.0332 _diffrn_source.pdbx_synchrotron_beamline X6A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS # _reflns.entry_id 3N4W _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0.000 _reflns.d_resolution_high 1.450 _reflns.d_resolution_low 20.000 _reflns.number_all ? _reflns.number_obs 27641 _reflns.percent_possible_obs 98.4 _reflns.pdbx_Rmerge_I_obs 0.05700 _reflns.pdbx_Rsym_value 0.05700 _reflns.pdbx_netI_over_sigmaI 51.5 _reflns.B_iso_Wilson_estimate 20.3 _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.47 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 95.4 _reflns_shell.Rmerge_I_obs 0.407 _reflns_shell.meanI_over_sigI_obs 5.100 _reflns_shell.pdbx_Rsym_value 0.407 _reflns_shell.pdbx_redundancy 5.9 _reflns_shell.number_unique_all 1314 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3N4W _refine.ls_d_res_high 1.450 _refine.ls_d_res_low 19.370 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 100.000 _refine.ls_number_reflns_obs 26156 _refine.ls_number_reflns_all 26156 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'U VALUES REFINED INDIVIDUALLY' _refine.ls_R_factor_all 0.187 _refine.ls_R_factor_obs 0.187 _refine.ls_R_factor_R_work 0.185 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.227 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1386 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 22.751 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model Isotropic _refine.aniso_B[1][1] 1.320 _refine.aniso_B[2][2] 0.000 _refine.aniso_B[3][3] -1.320 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.080 _refine.overall_SU_ML 0.045 _refine.overall_SU_B 2.524 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 2QT7' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 40.00 _refine.B_iso_min 12.03 _refine.occupancy_max 1.00 _refine.occupancy_min 0.00 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1260 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 140 _refine_hist.number_atoms_total 1401 _refine_hist.d_res_high 1.450 _refine_hist.d_res_low 19.370 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1375 0.013 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1891 1.470 1.983 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 199 5.609 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 55 36.222 25.818 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 257 13.631 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 21.834 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 238 0.106 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1012 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 881 1.552 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1437 2.547 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 494 3.492 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 435 5.318 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1375 1.500 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.450 _refine_ls_shell.d_res_low 1.487 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 1821 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.277 _refine_ls_shell.R_factor_R_free 0.292 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1922 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3N4W _struct.title ;Crystal structure of an abridged SER to ALA mutant of the mature ectodomain of the human receptor-type protein-tyrosine phosphatase ICA512/IA-2 at pH 7.5 ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3N4W _struct_keywords.text ;IA-2, ICA-512, PROTEIN-TYROSINE PHOSPHATASE, TRANSMEMBRANE PROTEIN, DIABETES, AUTOIMMUNITY, PROTEOLYSIS, GLYCOPROTEIN, RECEPTOR, Transferase ; _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 13 ? HIS A 29 ? SER A 482 HIS A 498 1 ? 17 HELX_P HELX_P2 2 SER A 31 ? GLY A 33 ? SER A 500 GLY A 502 5 ? 3 HELX_P HELX_P3 3 SER A 57 ? VAL A 68 ? SER A 526 VAL A 537 1 ? 12 HELX_P HELX_P4 4 VAL A 68 ? GLY A 77 ? VAL A 537 GLY A 546 1 ? 10 HELX_P HELX_P5 5 SER B 13 ? HIS B 29 ? SER B 482 HIS B 498 1 ? 17 HELX_P HELX_P6 6 SER B 31 ? GLY B 33 ? SER B 500 GLY B 502 5 ? 3 HELX_P HELX_P7 7 SER B 57 ? VAL B 68 ? SER B 526 VAL B 537 1 ? 12 HELX_P HELX_P8 8 VAL B 68 ? GLY B 77 ? VAL B 537 GLY B 546 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 600 A HOH 701 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc2 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 600 A HOH 703 1_555 ? ? ? ? ? ? ? 2.404 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 10 A . ? LYS 479 A PRO 11 A ? PRO 480 A 1 -0.40 2 LYS 10 A . ? LYS 479 A PRO 11 A ? PRO 480 A 1 0.28 3 LYS 10 B . ? LYS 479 B PRO 11 B ? PRO 480 B 1 -0.17 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 35 ? VAL A 41 ? PHE A 504 VAL A 510 A 2 ALA A 44 ? ILE A 49 ? ALA A 513 ILE A 518 A 3 TYR A 2 ? THR A 7 ? TYR A 471 THR A 476 A 4 ILE A 80 ? GLY A 86 ? ILE A 549 GLY A 555 A 5 ILE B 80 ? GLY B 86 ? ILE B 549 GLY B 555 A 6 TYR B 2 ? THR B 7 ? TYR B 471 THR B 476 A 7 ALA B 44 ? ILE B 49 ? ALA B 513 ILE B 518 A 8 PHE B 35 ? VAL B 41 ? PHE B 504 VAL B 510 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 36 ? N ILE A 505 O ARG A 48 ? O ARG A 517 A 2 3 O PHE A 47 ? O PHE A 516 N GLY A 3 ? N GLY A 472 A 3 4 N TYR A 2 ? N TYR A 471 O GLY A 86 ? O GLY A 555 A 4 5 N THR A 83 ? N THR A 552 O VAL B 85 ? O VAL B 554 A 5 6 O GLY B 86 ? O GLY B 555 N TYR B 2 ? N TYR B 471 A 6 7 N GLY B 3 ? N GLY B 472 O PHE B 47 ? O PHE B 516 A 7 8 O THR B 46 ? O THR B 515 N ALA B 39 ? N ALA B 508 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 600 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE CA A 600' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 29 ? HIS A 498 . ? 1_555 ? 2 AC1 6 HOH D . ? HOH A 701 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 703 . ? 1_555 ? 4 AC1 6 GLU B 73 ? GLU B 542 . ? 3_644 ? 5 AC1 6 GLN B 79 ? GLN B 548 . ? 3_644 ? 6 AC1 6 HOH E . ? HOH B 793 . ? 3_644 ? # _atom_sites.entry_id 3N4W _atom_sites.fract_transf_matrix[1][1] 0.031774 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015148 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013578 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 470 470 GLU GLU A . n A 1 2 TYR 2 471 471 TYR TYR A . n A 1 3 GLY 3 472 472 GLY GLY A . n A 1 4 TYR 4 473 473 TYR TYR A . n A 1 5 ILE 5 474 474 ILE ILE A . n A 1 6 VAL 6 475 475 VAL VAL A . n A 1 7 THR 7 476 476 THR THR A . n A 1 8 ASP 8 477 477 ASP ASP A . n A 1 9 GLN 9 478 478 GLN GLN A . n A 1 10 LYS 10 479 479 LYS LYS A . n A 1 11 PRO 11 480 480 PRO PRO A . n A 1 12 LEU 12 481 481 LEU LEU A . n A 1 13 SER 13 482 482 SER SER A . n A 1 14 LEU 14 483 483 LEU LEU A . n A 1 15 ALA 15 484 484 ALA ALA A . n A 1 16 ALA 16 485 485 ALA ALA A . n A 1 17 GLY 17 486 486 GLY GLY A . n A 1 18 VAL 18 487 487 VAL VAL A . n A 1 19 LYS 19 488 488 LYS LYS A . n A 1 20 LEU 20 489 489 LEU LEU A . n A 1 21 LEU 21 490 490 LEU LEU A . n A 1 22 GLU 22 491 491 GLU GLU A . n A 1 23 ILE 23 492 492 ILE ILE A . n A 1 24 LEU 24 493 493 LEU LEU A . n A 1 25 ALA 25 494 494 ALA ALA A . n A 1 26 GLU 26 495 495 GLU GLU A . n A 1 27 HIS 27 496 496 HIS HIS A . n A 1 28 VAL 28 497 497 VAL VAL A . n A 1 29 HIS 29 498 498 HIS HIS A . n A 1 30 MET 30 499 499 MET MET A . n A 1 31 SER 31 500 500 SER SER A . n A 1 32 SER 32 501 501 SER SER A . n A 1 33 GLY 33 502 502 GLY GLY A . n A 1 34 SER 34 503 503 SER SER A . n A 1 35 PHE 35 504 504 PHE PHE A . n A 1 36 ILE 36 505 505 ILE ILE A . n A 1 37 ASN 37 506 506 ASN ASN A . n A 1 38 ILE 38 507 507 ILE ILE A . n A 1 39 ALA 39 508 508 ALA ALA A . n A 1 40 VAL 40 509 509 VAL VAL A . n A 1 41 VAL 41 510 510 VAL VAL A . n A 1 42 GLY 42 511 511 GLY GLY A . n A 1 43 PRO 43 512 512 PRO PRO A . n A 1 44 ALA 44 513 513 ALA ALA A . n A 1 45 LEU 45 514 514 LEU LEU A . n A 1 46 THR 46 515 515 THR THR A . n A 1 47 PHE 47 516 516 PHE PHE A . n A 1 48 ARG 48 517 517 ARG ARG A . n A 1 49 ILE 49 518 518 ILE ILE A . n A 1 50 ARG 50 519 519 ARG ARG A . n A 1 51 HIS 51 520 520 HIS HIS A . n A 1 52 ASN 52 521 521 ASN ASN A . n A 1 53 GLU 53 522 522 GLU GLU A . n A 1 54 GLN 54 523 523 GLN GLN A . n A 1 55 ASN 55 524 524 ASN ASN A . n A 1 56 LEU 56 525 525 LEU LEU A . n A 1 57 SER 57 526 526 SER SER A . n A 1 58 LEU 58 527 527 LEU LEU A . n A 1 59 ALA 59 528 528 ALA ALA A . n A 1 60 ASP 60 529 529 ASP ASP A . n A 1 61 VAL 61 530 530 VAL VAL A . n A 1 62 THR 62 531 531 THR THR A . n A 1 63 GLN 63 532 532 GLN GLN A . n A 1 64 GLN 64 533 533 GLN GLN A . n A 1 65 ALA 65 534 534 ALA ALA A . n A 1 66 GLY 66 535 535 GLY GLY A . n A 1 67 LEU 67 536 536 LEU LEU A . n A 1 68 VAL 68 537 537 VAL VAL A . n A 1 69 LYS 69 538 538 LYS LYS A . n A 1 70 SER 70 539 539 SER SER A . n A 1 71 GLU 71 540 540 GLU GLU A . n A 1 72 LEU 72 541 541 LEU LEU A . n A 1 73 GLU 73 542 542 GLU GLU A . n A 1 74 ALA 74 543 543 ALA ALA A . n A 1 75 GLN 75 544 544 GLN GLN A . n A 1 76 THR 76 545 545 THR THR A . n A 1 77 GLY 77 546 546 GLY GLY A . n A 1 78 LEU 78 547 547 LEU LEU A . n A 1 79 GLN 79 548 548 GLN GLN A . n A 1 80 ILE 80 549 549 ILE ILE A . n A 1 81 LEU 81 550 550 LEU LEU A . n A 1 82 GLN 82 551 551 GLN GLN A . n A 1 83 THR 83 552 552 THR THR A . n A 1 84 GLY 84 553 553 GLY GLY A . n A 1 85 VAL 85 554 554 VAL VAL A . n A 1 86 GLY 86 555 555 GLY GLY A . n A 1 87 GLN 87 556 556 GLN GLN A . n A 1 88 ARG 88 557 ? ? ? A . n A 1 89 GLU 89 558 ? ? ? A . n B 1 1 GLU 1 470 470 GLU GLU B . n B 1 2 TYR 2 471 471 TYR TYR B . n B 1 3 GLY 3 472 472 GLY GLY B . n B 1 4 TYR 4 473 473 TYR TYR B . n B 1 5 ILE 5 474 474 ILE ILE B . n B 1 6 VAL 6 475 475 VAL VAL B . n B 1 7 THR 7 476 476 THR THR B . n B 1 8 ASP 8 477 477 ASP ASP B . n B 1 9 GLN 9 478 478 GLN GLN B . n B 1 10 LYS 10 479 479 LYS LYS B . n B 1 11 PRO 11 480 480 PRO PRO B . n B 1 12 LEU 12 481 481 LEU LEU B . n B 1 13 SER 13 482 482 SER SER B . n B 1 14 LEU 14 483 483 LEU LEU B . n B 1 15 ALA 15 484 484 ALA ALA B . n B 1 16 ALA 16 485 485 ALA ALA B . n B 1 17 GLY 17 486 486 GLY GLY B . n B 1 18 VAL 18 487 487 VAL VAL B . n B 1 19 LYS 19 488 488 LYS LYS B . n B 1 20 LEU 20 489 489 LEU LEU B . n B 1 21 LEU 21 490 490 LEU LEU B . n B 1 22 GLU 22 491 491 GLU GLU B . n B 1 23 ILE 23 492 492 ILE ILE B . n B 1 24 LEU 24 493 493 LEU LEU B . n B 1 25 ALA 25 494 494 ALA ALA B . n B 1 26 GLU 26 495 495 GLU GLU B . n B 1 27 HIS 27 496 496 HIS HIS B . n B 1 28 VAL 28 497 497 VAL VAL B . n B 1 29 HIS 29 498 498 HIS HIS B . n B 1 30 MET 30 499 499 MET MET B . n B 1 31 SER 31 500 500 SER SER B . n B 1 32 SER 32 501 501 SER SER B . n B 1 33 GLY 33 502 502 GLY GLY B . n B 1 34 SER 34 503 503 SER SER B . n B 1 35 PHE 35 504 504 PHE PHE B . n B 1 36 ILE 36 505 505 ILE ILE B . n B 1 37 ASN 37 506 506 ASN ASN B . n B 1 38 ILE 38 507 507 ILE ILE B . n B 1 39 ALA 39 508 508 ALA ALA B . n B 1 40 VAL 40 509 509 VAL VAL B . n B 1 41 VAL 41 510 510 VAL VAL B . n B 1 42 GLY 42 511 511 GLY GLY B . n B 1 43 PRO 43 512 512 PRO PRO B . n B 1 44 ALA 44 513 513 ALA ALA B . n B 1 45 LEU 45 514 514 LEU LEU B . n B 1 46 THR 46 515 515 THR THR B . n B 1 47 PHE 47 516 516 PHE PHE B . n B 1 48 ARG 48 517 517 ARG ARG B . n B 1 49 ILE 49 518 518 ILE ILE B . n B 1 50 ARG 50 519 519 ARG ARG B . n B 1 51 HIS 51 520 ? ? ? B . n B 1 52 ASN 52 521 ? ? ? B . n B 1 53 GLU 53 522 ? ? ? B . n B 1 54 GLN 54 523 ? ? ? B . n B 1 55 ASN 55 524 ? ? ? B . n B 1 56 LEU 56 525 ? ? ? B . n B 1 57 SER 57 526 526 SER SER B . n B 1 58 LEU 58 527 527 LEU LEU B . n B 1 59 ALA 59 528 528 ALA ALA B . n B 1 60 ASP 60 529 529 ASP ASP B . n B 1 61 VAL 61 530 530 VAL VAL B . n B 1 62 THR 62 531 531 THR THR B . n B 1 63 GLN 63 532 532 GLN GLN B . n B 1 64 GLN 64 533 533 GLN GLN B . n B 1 65 ALA 65 534 534 ALA ALA B . n B 1 66 GLY 66 535 535 GLY GLY B . n B 1 67 LEU 67 536 536 LEU LEU B . n B 1 68 VAL 68 537 537 VAL VAL B . n B 1 69 LYS 69 538 538 LYS LYS B . n B 1 70 SER 70 539 539 SER SER B . n B 1 71 GLU 71 540 540 GLU GLU B . n B 1 72 LEU 72 541 541 LEU LEU B . n B 1 73 GLU 73 542 542 GLU GLU B . n B 1 74 ALA 74 543 543 ALA ALA B . n B 1 75 GLN 75 544 544 GLN GLN B . n B 1 76 THR 76 545 545 THR THR B . n B 1 77 GLY 77 546 546 GLY GLY B . n B 1 78 LEU 78 547 547 LEU LEU B . n B 1 79 GLN 79 548 548 GLN GLN B . n B 1 80 ILE 80 549 549 ILE ILE B . n B 1 81 LEU 81 550 550 LEU LEU B . n B 1 82 GLN 82 551 551 GLN GLN B . n B 1 83 THR 83 552 552 THR THR B . n B 1 84 GLY 84 553 553 GLY GLY B . n B 1 85 VAL 85 554 554 VAL VAL B . n B 1 86 GLY 86 555 555 GLY GLY B . n B 1 87 GLN 87 556 556 GLN GLN B . n B 1 88 ARG 88 557 ? ? ? B . n B 1 89 GLU 89 558 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA 1 600 600 CA CA A . D 3 HOH 1 700 700 HOH HOH A . D 3 HOH 2 701 701 HOH HOH A . D 3 HOH 3 702 702 HOH HOH A . D 3 HOH 4 703 703 HOH HOH A . D 3 HOH 5 704 704 HOH HOH A . D 3 HOH 6 705 705 HOH HOH A . D 3 HOH 7 706 706 HOH HOH A . D 3 HOH 8 707 707 HOH HOH A . D 3 HOH 9 708 708 HOH HOH A . D 3 HOH 10 709 709 HOH HOH A . D 3 HOH 11 710 710 HOH HOH A . D 3 HOH 12 711 711 HOH HOH A . D 3 HOH 13 712 712 HOH HOH A . D 3 HOH 14 713 713 HOH HOH A . D 3 HOH 15 714 714 HOH HOH A . D 3 HOH 16 715 715 HOH HOH A . D 3 HOH 17 716 716 HOH HOH A . D 3 HOH 18 717 717 HOH HOH A . D 3 HOH 19 718 718 HOH HOH A . D 3 HOH 20 719 719 HOH HOH A . D 3 HOH 21 720 720 HOH HOH A . D 3 HOH 22 721 721 HOH HOH A . D 3 HOH 23 722 722 HOH HOH A . D 3 HOH 24 723 723 HOH HOH A . D 3 HOH 25 724 724 HOH HOH A . D 3 HOH 26 726 726 HOH HOH A . D 3 HOH 27 727 727 HOH HOH A . D 3 HOH 28 728 728 HOH HOH A . D 3 HOH 29 729 729 HOH HOH A . D 3 HOH 30 730 730 HOH HOH A . D 3 HOH 31 731 731 HOH HOH A . D 3 HOH 32 732 732 HOH HOH A . D 3 HOH 33 733 733 HOH HOH A . D 3 HOH 34 734 734 HOH HOH A . D 3 HOH 35 735 735 HOH HOH A . D 3 HOH 36 736 736 HOH HOH A . D 3 HOH 37 737 737 HOH HOH A . D 3 HOH 38 738 738 HOH HOH A . D 3 HOH 39 739 739 HOH HOH A . D 3 HOH 40 740 740 HOH HOH A . D 3 HOH 41 741 741 HOH HOH A . D 3 HOH 42 742 742 HOH HOH A . D 3 HOH 43 743 743 HOH HOH A . D 3 HOH 44 744 744 HOH HOH A . D 3 HOH 45 745 745 HOH HOH A . D 3 HOH 46 746 746 HOH HOH A . D 3 HOH 47 747 747 HOH HOH A . D 3 HOH 48 748 748 HOH HOH A . D 3 HOH 49 749 749 HOH HOH A . D 3 HOH 50 750 750 HOH HOH A . D 3 HOH 51 751 751 HOH HOH A . D 3 HOH 52 752 752 HOH HOH A . D 3 HOH 53 753 753 HOH HOH A . D 3 HOH 54 754 754 HOH HOH A . D 3 HOH 55 755 755 HOH HOH A . D 3 HOH 56 756 756 HOH HOH A . D 3 HOH 57 759 759 HOH HOH A . D 3 HOH 58 760 760 HOH HOH A . D 3 HOH 59 761 761 HOH HOH A . D 3 HOH 60 762 762 HOH HOH A . D 3 HOH 61 763 763 HOH HOH A . D 3 HOH 62 764 764 HOH HOH A . D 3 HOH 63 765 765 HOH HOH A . D 3 HOH 64 766 766 HOH HOH A . D 3 HOH 65 767 767 HOH HOH A . D 3 HOH 66 768 768 HOH HOH A . D 3 HOH 67 769 769 HOH HOH A . D 3 HOH 68 770 770 HOH HOH A . D 3 HOH 69 771 771 HOH HOH A . D 3 HOH 70 778 778 HOH HOH A . D 3 HOH 71 783 783 HOH HOH A . D 3 HOH 72 787 787 HOH HOH A . D 3 HOH 73 805 805 HOH HOH A . D 3 HOH 74 827 827 HOH HOH A . D 3 HOH 75 829 829 HOH HOH A . D 3 HOH 76 831 831 HOH HOH A . E 3 HOH 1 725 725 HOH HOH B . E 3 HOH 2 757 757 HOH HOH B . E 3 HOH 3 758 758 HOH HOH B . E 3 HOH 4 772 772 HOH HOH B . E 3 HOH 5 773 773 HOH HOH B . E 3 HOH 6 774 774 HOH HOH B . E 3 HOH 7 775 775 HOH HOH B . E 3 HOH 8 776 776 HOH HOH B . E 3 HOH 9 777 777 HOH HOH B . E 3 HOH 10 779 779 HOH HOH B . E 3 HOH 11 780 780 HOH HOH B . E 3 HOH 12 781 781 HOH HOH B . E 3 HOH 13 782 782 HOH HOH B . E 3 HOH 14 784 784 HOH HOH B . E 3 HOH 15 785 785 HOH HOH B . E 3 HOH 16 786 786 HOH HOH B . E 3 HOH 17 788 788 HOH HOH B . E 3 HOH 18 789 789 HOH HOH B . E 3 HOH 19 790 790 HOH HOH B . E 3 HOH 20 791 791 HOH HOH B . E 3 HOH 21 792 792 HOH HOH B . E 3 HOH 22 793 793 HOH HOH B . E 3 HOH 23 794 794 HOH HOH B . E 3 HOH 24 795 795 HOH HOH B . E 3 HOH 25 796 796 HOH HOH B . E 3 HOH 26 797 797 HOH HOH B . E 3 HOH 27 798 798 HOH HOH B . E 3 HOH 28 799 799 HOH HOH B . E 3 HOH 29 800 800 HOH HOH B . E 3 HOH 30 801 801 HOH HOH B . E 3 HOH 31 802 802 HOH HOH B . E 3 HOH 32 803 803 HOH HOH B . E 3 HOH 33 804 804 HOH HOH B . E 3 HOH 34 806 806 HOH HOH B . E 3 HOH 35 807 807 HOH HOH B . E 3 HOH 36 808 808 HOH HOH B . E 3 HOH 37 809 809 HOH HOH B . E 3 HOH 38 810 810 HOH HOH B . E 3 HOH 39 811 811 HOH HOH B . E 3 HOH 40 812 812 HOH HOH B . E 3 HOH 41 813 813 HOH HOH B . E 3 HOH 42 814 814 HOH HOH B . E 3 HOH 43 815 815 HOH HOH B . E 3 HOH 44 816 816 HOH HOH B . E 3 HOH 45 817 817 HOH HOH B . E 3 HOH 46 818 818 HOH HOH B . E 3 HOH 47 819 819 HOH HOH B . E 3 HOH 48 820 820 HOH HOH B . E 3 HOH 49 821 821 HOH HOH B . E 3 HOH 50 822 822 HOH HOH B . E 3 HOH 51 823 823 HOH HOH B . E 3 HOH 52 824 824 HOH HOH B . E 3 HOH 53 825 825 HOH HOH B . E 3 HOH 54 826 826 HOH HOH B . E 3 HOH 55 828 828 HOH HOH B . E 3 HOH 56 830 830 HOH HOH B . E 3 HOH 57 832 832 HOH HOH B . E 3 HOH 58 833 833 HOH HOH B . E 3 HOH 59 834 834 HOH HOH B . E 3 HOH 60 835 835 HOH HOH B . E 3 HOH 61 836 836 HOH HOH B . E 3 HOH 62 837 837 HOH HOH B . E 3 HOH 63 838 838 HOH HOH B . E 3 HOH 64 839 839 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E 2 1 A,C,D 2 2 B,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1130 ? 2 MORE -15 ? 2 'SSA (A^2)' 8250 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x+1/2,-y,z+1/2 -1.0000000000 0.0000000000 0.0000000000 15.7360000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 36.8250000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id D _pdbx_struct_conn_angle.ptnr1_label_comp_id HOH _pdbx_struct_conn_angle.ptnr1_label_seq_id . _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr1_auth_seq_id 701 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id CA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id C _pdbx_struct_conn_angle.ptnr2_label_comp_id CA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id CA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 600 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id D _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 703 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 91.3 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2013-07-10 4 'Structure model' 1 3 2017-11-08 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 4 'Structure model' software 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_initial_refinement_model 7 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method mr # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.100 'Jan. 22, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ B LYS 538 ? B O B HOH 830 ? ? 1.63 2 1 O B HOH 725 ? ? O B HOH 758 ? ? 1.97 3 1 O A HOH 702 ? ? O A HOH 745 ? ? 2.12 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 ND1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HIS _pdbx_validate_symm_contact.auth_seq_id_1 520 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 821 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_655 _pdbx_validate_symm_contact.dist 2.07 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 517 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 517 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 517 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.46 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.16 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 498 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 71.09 _pdbx_validate_torsion.psi 46.68 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A HIS 520 ? CG ? A HIS 51 CG 2 1 Y 0 A HIS 520 ? ND1 ? A HIS 51 ND1 3 1 Y 0 A HIS 520 ? CD2 ? A HIS 51 CD2 4 1 Y 0 A HIS 520 ? CE1 ? A HIS 51 CE1 5 1 Y 0 A HIS 520 ? NE2 ? A HIS 51 NE2 6 1 Y 0 B LYS 479 ? CD ? B LYS 10 CD 7 1 Y 0 B LYS 479 ? CE ? B LYS 10 CE 8 1 Y 0 B LYS 479 ? NZ ? B LYS 10 NZ 9 1 Y 0 B HIS 498 ? CB ? B HIS 29 CB 10 1 Y 0 B HIS 498 ? CG ? B HIS 29 CG 11 1 Y 0 B HIS 498 ? ND1 ? B HIS 29 ND1 12 1 Y 0 B HIS 498 ? CD2 ? B HIS 29 CD2 13 1 Y 0 B HIS 498 ? CE1 ? B HIS 29 CE1 14 1 Y 0 B HIS 498 ? NE2 ? B HIS 29 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 557 ? A ARG 88 2 1 Y 1 A GLU 558 ? A GLU 89 3 1 Y 1 B HIS 520 ? B HIS 51 4 1 Y 1 B ASN 521 ? B ASN 52 5 1 Y 1 B GLU 522 ? B GLU 53 6 1 Y 1 B GLN 523 ? B GLN 54 7 1 Y 1 B ASN 524 ? B ASN 55 8 1 Y 1 B LEU 525 ? B LEU 56 9 1 Y 1 B ARG 557 ? B ARG 88 10 1 Y 1 B GLU 558 ? B GLU 89 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 HIS N N N N 124 HIS CA C N S 125 HIS C C N N 126 HIS O O N N 127 HIS CB C N N 128 HIS CG C Y N 129 HIS ND1 N Y N 130 HIS CD2 C Y N 131 HIS CE1 C Y N 132 HIS NE2 N Y N 133 HIS OXT O N N 134 HIS H H N N 135 HIS H2 H N N 136 HIS HA H N N 137 HIS HB2 H N N 138 HIS HB3 H N N 139 HIS HD1 H N N 140 HIS HD2 H N N 141 HIS HE1 H N N 142 HIS HE2 H N N 143 HIS HXT H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 ILE N N N N 148 ILE CA C N S 149 ILE C C N N 150 ILE O O N N 151 ILE CB C N S 152 ILE CG1 C N N 153 ILE CG2 C N N 154 ILE CD1 C N N 155 ILE OXT O N N 156 ILE H H N N 157 ILE H2 H N N 158 ILE HA H N N 159 ILE HB H N N 160 ILE HG12 H N N 161 ILE HG13 H N N 162 ILE HG21 H N N 163 ILE HG22 H N N 164 ILE HG23 H N N 165 ILE HD11 H N N 166 ILE HD12 H N N 167 ILE HD13 H N N 168 ILE HXT H N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THR N N N N 291 THR CA C N S 292 THR C C N N 293 THR O O N N 294 THR CB C N R 295 THR OG1 O N N 296 THR CG2 C N N 297 THR OXT O N N 298 THR H H N N 299 THR H2 H N N 300 THR HA H N N 301 THR HB H N N 302 THR HG1 H N N 303 THR HG21 H N N 304 THR HG22 H N N 305 THR HG23 H N N 306 THR HXT H N N 307 TYR N N N N 308 TYR CA C N S 309 TYR C C N N 310 TYR O O N N 311 TYR CB C N N 312 TYR CG C Y N 313 TYR CD1 C Y N 314 TYR CD2 C Y N 315 TYR CE1 C Y N 316 TYR CE2 C Y N 317 TYR CZ C Y N 318 TYR OH O N N 319 TYR OXT O N N 320 TYR H H N N 321 TYR H2 H N N 322 TYR HA H N N 323 TYR HB2 H N N 324 TYR HB3 H N N 325 TYR HD1 H N N 326 TYR HD2 H N N 327 TYR HE1 H N N 328 TYR HE2 H N N 329 TYR HH H N N 330 TYR HXT H N N 331 VAL N N N N 332 VAL CA C N S 333 VAL C C N N 334 VAL O O N N 335 VAL CB C N N 336 VAL CG1 C N N 337 VAL CG2 C N N 338 VAL OXT O N N 339 VAL H H N N 340 VAL H2 H N N 341 VAL HA H N N 342 VAL HB H N N 343 VAL HG11 H N N 344 VAL HG12 H N N 345 VAL HG13 H N N 346 VAL HG21 H N N 347 VAL HG22 H N N 348 VAL HG23 H N N 349 VAL HXT H N N 350 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2QT7 _pdbx_initial_refinement_model.details 'PDB ENTRY 2QT7' #