data_3N9D # _entry.id 3N9D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3N9D pdb_00003n9d 10.2210/pdb3n9d/pdb RCSB RCSB059544 ? ? WWPDB D_1000059544 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3N9B _pdbx_database_related.details 'Triclinic form of identical protein crystallized under identical conditions - this crystal form is simply an alternate lattice.' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3N9D _pdbx_database_status.recvd_initial_deposition_date 2010-05-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shuman, S.' 1 'Nair, P.' 2 'Smith, P.' 3 # _citation.id primary _citation.title ;Structure of bacterial LigD 3'-phosphoesterase unveils a DNA repair superfamily ; _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 107 _citation.page_first 12822 _citation.page_last 12827 _citation.year 2010 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20616014 _citation.pdbx_database_id_DOI 10.1073/pnas.1005830107 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nair, P.A.' 1 ? primary 'Smith, P.' 2 ? primary 'Shuman, S.' 3 ? # _cell.entry_id 3N9D _cell.length_a 90.997 _cell.length_b 56.585 _cell.length_c 43.503 _cell.angle_alpha 90.00 _cell.angle_beta 118.33 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3N9D _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable ATP-dependent DNA ligase' 19474.963 1 ? ? 'Phosphoesterase Domain' ? 2 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 non-polymer syn 'YTTRIUM (III) ION' 88.906 2 ? ? ? ? 5 water nat water 18.015 85 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;RQTPEPSGRKPRKDSTGLLRYCVQKHDASRLHYDFRLELDGTLKSWAVPKGPCLDPAVKRLAVQVEDHPLDYADFEGSIP QGHYGAGDVIVWDRGAWTPLDDPREGLEKGHLSFALDGEKLSGRWHLIRTNLRGKQSQWFLVKAKDGEARSLDRFDVLKE RPDSVLSERTL ; _entity_poly.pdbx_seq_one_letter_code_can ;RQTPEPSGRKPRKDSTGLLRYCVQKHDASRLHYDFRLELDGTLKSWAVPKGPCLDPAVKRLAVQVEDHPLDYADFEGSIP QGHYGAGDVIVWDRGAWTPLDDPREGLEKGHLSFALDGEKLSGRWHLIRTNLRGKQSQWFLVKAKDGEARSLDRFDVLKE RPDSVLSERTL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 GLN n 1 3 THR n 1 4 PRO n 1 5 GLU n 1 6 PRO n 1 7 SER n 1 8 GLY n 1 9 ARG n 1 10 LYS n 1 11 PRO n 1 12 ARG n 1 13 LYS n 1 14 ASP n 1 15 SER n 1 16 THR n 1 17 GLY n 1 18 LEU n 1 19 LEU n 1 20 ARG n 1 21 TYR n 1 22 CYS n 1 23 VAL n 1 24 GLN n 1 25 LYS n 1 26 HIS n 1 27 ASP n 1 28 ALA n 1 29 SER n 1 30 ARG n 1 31 LEU n 1 32 HIS n 1 33 TYR n 1 34 ASP n 1 35 PHE n 1 36 ARG n 1 37 LEU n 1 38 GLU n 1 39 LEU n 1 40 ASP n 1 41 GLY n 1 42 THR n 1 43 LEU n 1 44 LYS n 1 45 SER n 1 46 TRP n 1 47 ALA n 1 48 VAL n 1 49 PRO n 1 50 LYS n 1 51 GLY n 1 52 PRO n 1 53 CYS n 1 54 LEU n 1 55 ASP n 1 56 PRO n 1 57 ALA n 1 58 VAL n 1 59 LYS n 1 60 ARG n 1 61 LEU n 1 62 ALA n 1 63 VAL n 1 64 GLN n 1 65 VAL n 1 66 GLU n 1 67 ASP n 1 68 HIS n 1 69 PRO n 1 70 LEU n 1 71 ASP n 1 72 TYR n 1 73 ALA n 1 74 ASP n 1 75 PHE n 1 76 GLU n 1 77 GLY n 1 78 SER n 1 79 ILE n 1 80 PRO n 1 81 GLN n 1 82 GLY n 1 83 HIS n 1 84 TYR n 1 85 GLY n 1 86 ALA n 1 87 GLY n 1 88 ASP n 1 89 VAL n 1 90 ILE n 1 91 VAL n 1 92 TRP n 1 93 ASP n 1 94 ARG n 1 95 GLY n 1 96 ALA n 1 97 TRP n 1 98 THR n 1 99 PRO n 1 100 LEU n 1 101 ASP n 1 102 ASP n 1 103 PRO n 1 104 ARG n 1 105 GLU n 1 106 GLY n 1 107 LEU n 1 108 GLU n 1 109 LYS n 1 110 GLY n 1 111 HIS n 1 112 LEU n 1 113 SER n 1 114 PHE n 1 115 ALA n 1 116 LEU n 1 117 ASP n 1 118 GLY n 1 119 GLU n 1 120 LYS n 1 121 LEU n 1 122 SER n 1 123 GLY n 1 124 ARG n 1 125 TRP n 1 126 HIS n 1 127 LEU n 1 128 ILE n 1 129 ARG n 1 130 THR n 1 131 ASN n 1 132 LEU n 1 133 ARG n 1 134 GLY n 1 135 LYS n 1 136 GLN n 1 137 SER n 1 138 GLN n 1 139 TRP n 1 140 PHE n 1 141 LEU n 1 142 VAL n 1 143 LYS n 1 144 ALA n 1 145 LYS n 1 146 ASP n 1 147 GLY n 1 148 GLU n 1 149 ALA n 1 150 ARG n 1 151 SER n 1 152 LEU n 1 153 ASP n 1 154 ARG n 1 155 PHE n 1 156 ASP n 1 157 VAL n 1 158 LEU n 1 159 LYS n 1 160 GLU n 1 161 ARG n 1 162 PRO n 1 163 ASP n 1 164 SER n 1 165 VAL n 1 166 LEU n 1 167 SER n 1 168 GLU n 1 169 ARG n 1 170 THR n 1 171 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP_250828.1, PA2138' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PA01 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'pET28b plasmid expressing His10-tagged-Smt3' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) RIL+' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9I1X7_PSEAE _struct_ref.pdbx_db_accession Q9I1X7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RQTPEPSGRKPRKDSTGLLRYCVQKHDASRLHYDFRLELDGTLKSWAVPKGPCLDPAVKRLAVQVEDHPLDYADFEGSIP QGHYGAGDVIVWDRGAWTPLDDPREGLEKGHLSFALDGEKLSGRWHLIRTNLRGKQSQWFLVKAKDGEARSLDRFDVLKE RPDSVLSERTL ; _struct_ref.pdbx_align_begin 17 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3N9D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 171 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9I1X7 _struct_ref_seq.db_align_beg 17 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 187 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 17 _struct_ref_seq.pdbx_auth_seq_align_end 187 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YT3 non-polymer . 'YTTRIUM (III) ION' ? 'Y 3' 88.906 # _exptl.entry_id 3N9D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_percent_sol 51.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;;Crystallization was carried out in sitting-drop vapor-diffusion setups with 1:1 mixtures of protein solution containing 1.3 mM PaePEC2 and 2mM MnCl2 and reservoir solution containing PEG 5000 monomethylether (MME) (20 - 30%), 100 mM 2-(N-morpholino) ethanesulfonic acid (MES) pH 6.8 - 7.0, 200 mM ammonium sulfate, and 10 mM yttrium (III) chloride at 22 C. , VAPOR DIFFUSION, SITTING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 130 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2010-02-20 _diffrn_detector.details 'Osmic Confocal Mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator None _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3N9D _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.3 _reflns.number_obs 8792 _reflns.number_all 8818 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rsym_value 0.103 _reflns.pdbx_netI_over_sigmaI 12.4 _reflns.B_iso_Wilson_estimate 34 _reflns.pdbx_redundancy 3.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.34 _reflns_shell.percent_possible_all 99.6 _reflns_shell.meanI_over_sigI_obs 2.97 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 458 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3N9D _refine.ls_number_reflns_obs 8730 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.293 _refine.ls_d_res_high 2.300 _refine.ls_percent_reflns_obs 99.70 _refine.ls_R_factor_obs 0.2171 _refine.ls_R_factor_R_work 0.2117 _refine.ls_R_factor_R_free 0.2628 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.65 _refine.ls_number_reflns_R_free 930 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -8.6580 _refine.aniso_B[2][2] -9.9400 _refine.aniso_B[3][3] 16.4482 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -4.5695 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.343 _refine.solvent_model_param_bsol 40.121 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.20 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'chain A of PDB entry 3N9B' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details '10% of data selected at random using CCP4/Unique' _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.33 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.ls_R_factor_all ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1187 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 85 _refine_hist.number_atoms_total 1285 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 28.293 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.002 ? ? 1235 'X-RAY DIFFRACTION' ? f_angle_d 0.638 ? ? 1673 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.379 ? ? 456 'X-RAY DIFFRACTION' ? f_chiral_restr 0.048 ? ? 173 'X-RAY DIFFRACTION' ? f_plane_restr 0.002 ? ? 217 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.3001 2.4213 1106 0.2398 100.00 0.3066 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.4213 2.5729 1079 0.2204 99.00 0.2719 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.5729 2.7714 1088 0.2198 100.00 0.3036 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.7714 3.0500 1122 0.2217 100.00 0.2936 . . 123 . . . . 'X-RAY DIFFRACTION' . 3.0500 3.4907 1125 0.2207 100.00 0.2854 . . 123 . . . . 'X-RAY DIFFRACTION' . 3.4907 4.3952 1126 0.1952 100.00 0.2358 . . 131 . . . . 'X-RAY DIFFRACTION' . 4.3952 28.2946 1154 0.1825 100.00 0.2031 . . 127 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3N9D _struct.title 'Monoclinic Structure of P. aeruginosa LigD phosphoesterase domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3N9D _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'Phosphoesterase, Metalloenzyme, Ligase, NHEJ, Manganese, Beta Barrel' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.details 'This protein is monomeric in solution and a single protomer occupies the asymmetric unit of this crystal lattice.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 69 ? PHE A 75 ? PRO A 85 PHE A 91 5 ? 7 HELX_P HELX_P2 2 ASP A 102 ? GLY A 110 ? ASP A 118 GLY A 126 1 ? 9 HELX_P HELX_P3 3 ASP A 156 ? ARG A 161 ? ASP A 172 ARG A 177 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B MN . MN ? ? ? 1_555 A HIS 26 ND1 ? ? A MN 1 A HIS 42 1_555 ? ? ? ? ? ? ? 2.573 ? ? metalc2 metalc ? ? B MN . MN ? ? ? 1_555 A HIS 32 NE2 ? ? A MN 1 A HIS 48 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc3 metalc ? ? B MN . MN ? ? ? 1_555 A ASP 34 OD2 ? ? A MN 1 A ASP 50 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc4 metalc ? ? B MN . MN ? ? ? 1_555 C SO4 . O3 ? ? A MN 1 A SO4 188 1_555 ? ? ? ? ? ? ? 2.254 ? ? metalc5 metalc ? ? D SO4 . O4 ? ? ? 1_555 F YT3 . Y ? ? A SO4 2 A YT3 190 1_555 ? ? ? ? ? ? ? 2.582 ? ? metalc6 metalc ? ? A GLU 105 OE2 ? ? ? 1_555 E YT3 . Y ? ? A GLU 121 A YT3 189 1_555 ? ? ? ? ? ? ? 2.888 ? ? metalc7 metalc ? ? A GLU 105 OE1 ? ? ? 1_555 E YT3 . Y ? ? A GLU 121 A YT3 189 1_555 ? ? ? ? ? ? ? 2.930 ? ? metalc8 metalc ? ? A GLU 108 OE1 ? ? ? 1_555 E YT3 . Y ? ? A GLU 124 A YT3 189 1_555 ? ? ? ? ? ? ? 2.660 ? ? metalc9 metalc ? ? A GLU 108 OE2 ? ? ? 1_555 E YT3 . Y ? ? A GLU 124 A YT3 189 1_555 ? ? ? ? ? ? ? 2.809 ? ? metalc10 metalc ? ? A GLU 119 OE1 ? ? ? 1_555 F YT3 . Y ? ? A GLU 135 A YT3 190 1_555 ? ? ? ? ? ? ? 2.662 ? ? metalc11 metalc ? ? A GLU 119 OE2 ? ? ? 1_555 F YT3 . Y ? ? A GLU 135 A YT3 190 1_555 ? ? ? ? ? ? ? 2.697 ? ? metalc12 metalc ? ? F YT3 . Y ? ? ? 1_555 G HOH . O ? ? A YT3 190 A HOH 254 1_555 ? ? ? ? ? ? ? 2.764 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 77 ? SER A 78 ? GLY A 93 SER A 94 A 2 ASP A 88 ? PRO A 99 ? ASP A 104 PRO A 115 A 3 HIS A 111 ? GLY A 118 ? HIS A 127 GLY A 134 A 4 SER A 122 ? ARG A 129 ? SER A 138 ARG A 145 A 5 GLN A 138 ? LYS A 143 ? GLN A 154 LYS A 159 A 6 LYS A 59 ? HIS A 68 ? LYS A 75 HIS A 84 A 7 THR A 42 ? VAL A 48 ? THR A 58 VAL A 64 A 8 HIS A 32 ? LEU A 39 ? HIS A 48 LEU A 55 A 9 ARG A 20 ? ASP A 27 ? ARG A 36 ASP A 43 A 10 ASP A 88 ? PRO A 99 ? ASP A 104 PRO A 115 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 77 ? N GLY A 93 O VAL A 89 ? O VAL A 105 A 2 3 N THR A 98 ? N THR A 114 O ALA A 115 ? O ALA A 131 A 3 4 N PHE A 114 ? N PHE A 130 O TRP A 125 ? O TRP A 141 A 4 5 N HIS A 126 ? N HIS A 142 O VAL A 142 ? O VAL A 158 A 5 6 O LEU A 141 ? O LEU A 157 N ARG A 60 ? N ARG A 76 A 6 7 O VAL A 63 ? O VAL A 79 N ALA A 47 ? N ALA A 63 A 7 8 O VAL A 48 ? O VAL A 64 N TYR A 33 ? N TYR A 49 A 8 9 O ASP A 34 ? O ASP A 50 N GLN A 24 ? N GLN A 40 A 9 10 N VAL A 23 ? N VAL A 39 O ASP A 93 ? O ASP A 109 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 1 ? 4 'BINDING SITE FOR RESIDUE MN A 1' AC2 Software A SO4 188 ? 6 'BINDING SITE FOR RESIDUE SO4 A 188' AC3 Software A SO4 2 ? 10 'BINDING SITE FOR RESIDUE SO4 A 2' AC4 Software A YT3 189 ? 4 'BINDING SITE FOR RESIDUE YT3 A 189' AC5 Software A YT3 190 ? 4 'BINDING SITE FOR RESIDUE YT3 A 190' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 26 ? HIS A 42 . ? 1_555 ? 2 AC1 4 HIS A 32 ? HIS A 48 . ? 1_555 ? 3 AC1 4 ASP A 34 ? ASP A 50 . ? 1_555 ? 4 AC1 4 SO4 C . ? SO4 A 188 . ? 1_555 ? 5 AC2 6 MN B . ? MN A 1 . ? 1_555 ? 6 AC2 6 HIS A 26 ? HIS A 42 . ? 1_555 ? 7 AC2 6 ASP A 34 ? ASP A 50 . ? 1_555 ? 8 AC2 6 LYS A 59 ? LYS A 75 . ? 4_454 ? 9 AC2 6 HIS A 68 ? HIS A 84 . ? 1_555 ? 10 AC2 6 HOH G . ? HOH A 204 . ? 1_555 ? 11 AC3 10 GLU A 119 ? GLU A 135 . ? 1_555 ? 12 AC3 10 LYS A 120 ? LYS A 136 . ? 2_454 ? 13 AC3 10 ARG A 161 ? ARG A 177 . ? 1_555 ? 14 AC3 10 ARG A 161 ? ARG A 177 . ? 2_454 ? 15 AC3 10 PRO A 162 ? PRO A 178 . ? 2_454 ? 16 AC3 10 ASP A 163 ? ASP A 179 . ? 2_454 ? 17 AC3 10 YT3 F . ? YT3 A 190 . ? 1_555 ? 18 AC3 10 HOH G . ? HOH A 237 . ? 1_555 ? 19 AC3 10 HOH G . ? HOH A 249 . ? 1_555 ? 20 AC3 10 HOH G . ? HOH A 254 . ? 1_555 ? 21 AC4 4 GLU A 105 ? GLU A 121 . ? 1_555 ? 22 AC4 4 GLU A 105 ? GLU A 121 . ? 2_555 ? 23 AC4 4 GLU A 108 ? GLU A 124 . ? 2_555 ? 24 AC4 4 GLU A 108 ? GLU A 124 . ? 1_555 ? 25 AC5 4 SO4 D . ? SO4 A 2 . ? 1_555 ? 26 AC5 4 GLU A 119 ? GLU A 135 . ? 1_555 ? 27 AC5 4 ASP A 163 ? ASP A 179 . ? 2_454 ? 28 AC5 4 HOH G . ? HOH A 254 . ? 1_555 ? # _database_PDB_matrix.entry_id 3N9D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3N9D _atom_sites.fract_transf_matrix[1][1] 0.010989 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005925 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017673 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026115 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O S Y # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 17 ? ? ? A . n A 1 2 GLN 2 18 ? ? ? A . n A 1 3 THR 3 19 ? ? ? A . n A 1 4 PRO 4 20 ? ? ? A . n A 1 5 GLU 5 21 ? ? ? A . n A 1 6 PRO 6 22 ? ? ? A . n A 1 7 SER 7 23 ? ? ? A . n A 1 8 GLY 8 24 ? ? ? A . n A 1 9 ARG 9 25 ? ? ? A . n A 1 10 LYS 10 26 ? ? ? A . n A 1 11 PRO 11 27 ? ? ? A . n A 1 12 ARG 12 28 ? ? ? A . n A 1 13 LYS 13 29 ? ? ? A . n A 1 14 ASP 14 30 ? ? ? A . n A 1 15 SER 15 31 ? ? ? A . n A 1 16 THR 16 32 ? ? ? A . n A 1 17 GLY 17 33 ? ? ? A . n A 1 18 LEU 18 34 34 LEU LEU A . n A 1 19 LEU 19 35 35 LEU LEU A . n A 1 20 ARG 20 36 36 ARG ARG A . n A 1 21 TYR 21 37 37 TYR TYR A . n A 1 22 CYS 22 38 38 CYS CYS A . n A 1 23 VAL 23 39 39 VAL VAL A . n A 1 24 GLN 24 40 40 GLN GLN A . n A 1 25 LYS 25 41 41 LYS LYS A . n A 1 26 HIS 26 42 42 HIS HIS A . n A 1 27 ASP 27 43 43 ASP ASP A . n A 1 28 ALA 28 44 44 ALA ALA A . n A 1 29 SER 29 45 45 SER SER A . n A 1 30 ARG 30 46 46 ARG ARG A . n A 1 31 LEU 31 47 47 LEU LEU A . n A 1 32 HIS 32 48 48 HIS HIS A . n A 1 33 TYR 33 49 49 TYR TYR A . n A 1 34 ASP 34 50 50 ASP ASP A . n A 1 35 PHE 35 51 51 PHE PHE A . n A 1 36 ARG 36 52 52 ARG ARG A . n A 1 37 LEU 37 53 53 LEU LEU A . n A 1 38 GLU 38 54 54 GLU GLU A . n A 1 39 LEU 39 55 55 LEU LEU A . n A 1 40 ASP 40 56 56 ASP ASP A . n A 1 41 GLY 41 57 57 GLY GLY A . n A 1 42 THR 42 58 58 THR THR A . n A 1 43 LEU 43 59 59 LEU LEU A . n A 1 44 LYS 44 60 60 LYS LYS A . n A 1 45 SER 45 61 61 SER SER A . n A 1 46 TRP 46 62 62 TRP TRP A . n A 1 47 ALA 47 63 63 ALA ALA A . n A 1 48 VAL 48 64 64 VAL VAL A . n A 1 49 PRO 49 65 65 PRO PRO A . n A 1 50 LYS 50 66 66 LYS LYS A . n A 1 51 GLY 51 67 67 GLY GLY A . n A 1 52 PRO 52 68 68 PRO PRO A . n A 1 53 CYS 53 69 69 CYS CYS A . n A 1 54 LEU 54 70 70 LEU LEU A . n A 1 55 ASP 55 71 71 ASP ASP A . n A 1 56 PRO 56 72 72 PRO PRO A . n A 1 57 ALA 57 73 73 ALA ALA A . n A 1 58 VAL 58 74 74 VAL VAL A . n A 1 59 LYS 59 75 75 LYS LYS A . n A 1 60 ARG 60 76 76 ARG ARG A . n A 1 61 LEU 61 77 77 LEU LEU A . n A 1 62 ALA 62 78 78 ALA ALA A . n A 1 63 VAL 63 79 79 VAL VAL A . n A 1 64 GLN 64 80 80 GLN GLN A . n A 1 65 VAL 65 81 81 VAL VAL A . n A 1 66 GLU 66 82 82 GLU GLU A . n A 1 67 ASP 67 83 83 ASP ASP A . n A 1 68 HIS 68 84 84 HIS HIS A . n A 1 69 PRO 69 85 85 PRO PRO A . n A 1 70 LEU 70 86 86 LEU LEU A . n A 1 71 ASP 71 87 87 ASP ASP A . n A 1 72 TYR 72 88 88 TYR TYR A . n A 1 73 ALA 73 89 89 ALA ALA A . n A 1 74 ASP 74 90 90 ASP ASP A . n A 1 75 PHE 75 91 91 PHE PHE A . n A 1 76 GLU 76 92 92 GLU GLU A . n A 1 77 GLY 77 93 93 GLY GLY A . n A 1 78 SER 78 94 94 SER SER A . n A 1 79 ILE 79 95 95 ILE ILE A . n A 1 80 PRO 80 96 96 PRO PRO A . n A 1 81 GLN 81 97 97 GLN GLN A . n A 1 82 GLY 82 98 98 GLY GLY A . n A 1 83 HIS 83 99 99 HIS HIS A . n A 1 84 TYR 84 100 ? ? ? A . n A 1 85 GLY 85 101 ? ? ? A . n A 1 86 ALA 86 102 102 ALA ALA A . n A 1 87 GLY 87 103 103 GLY GLY A . n A 1 88 ASP 88 104 104 ASP ASP A . n A 1 89 VAL 89 105 105 VAL VAL A . n A 1 90 ILE 90 106 106 ILE ILE A . n A 1 91 VAL 91 107 107 VAL VAL A . n A 1 92 TRP 92 108 108 TRP TRP A . n A 1 93 ASP 93 109 109 ASP ASP A . n A 1 94 ARG 94 110 110 ARG ARG A . n A 1 95 GLY 95 111 111 GLY GLY A . n A 1 96 ALA 96 112 112 ALA ALA A . n A 1 97 TRP 97 113 113 TRP TRP A . n A 1 98 THR 98 114 114 THR THR A . n A 1 99 PRO 99 115 115 PRO PRO A . n A 1 100 LEU 100 116 116 LEU LEU A . n A 1 101 ASP 101 117 117 ASP ASP A . n A 1 102 ASP 102 118 118 ASP ASP A . n A 1 103 PRO 103 119 119 PRO PRO A . n A 1 104 ARG 104 120 120 ARG ARG A . n A 1 105 GLU 105 121 121 GLU GLU A . n A 1 106 GLY 106 122 122 GLY GLY A . n A 1 107 LEU 107 123 123 LEU LEU A . n A 1 108 GLU 108 124 124 GLU GLU A . n A 1 109 LYS 109 125 125 LYS LYS A . n A 1 110 GLY 110 126 126 GLY GLY A . n A 1 111 HIS 111 127 127 HIS HIS A . n A 1 112 LEU 112 128 128 LEU LEU A . n A 1 113 SER 113 129 129 SER SER A . n A 1 114 PHE 114 130 130 PHE PHE A . n A 1 115 ALA 115 131 131 ALA ALA A . n A 1 116 LEU 116 132 132 LEU LEU A . n A 1 117 ASP 117 133 133 ASP ASP A . n A 1 118 GLY 118 134 134 GLY GLY A . n A 1 119 GLU 119 135 135 GLU GLU A . n A 1 120 LYS 120 136 136 LYS LYS A . n A 1 121 LEU 121 137 137 LEU LEU A . n A 1 122 SER 122 138 138 SER SER A . n A 1 123 GLY 123 139 139 GLY GLY A . n A 1 124 ARG 124 140 140 ARG ARG A . n A 1 125 TRP 125 141 141 TRP TRP A . n A 1 126 HIS 126 142 142 HIS HIS A . n A 1 127 LEU 127 143 143 LEU LEU A . n A 1 128 ILE 128 144 144 ILE ILE A . n A 1 129 ARG 129 145 145 ARG ARG A . n A 1 130 THR 130 146 146 THR THR A . n A 1 131 ASN 131 147 147 ASN ASN A . n A 1 132 LEU 132 148 148 LEU LEU A . n A 1 133 ARG 133 149 149 ARG ARG A . n A 1 134 GLY 134 150 150 GLY GLY A . n A 1 135 LYS 135 151 151 LYS LYS A . n A 1 136 GLN 136 152 152 GLN GLN A . n A 1 137 SER 137 153 153 SER SER A . n A 1 138 GLN 138 154 154 GLN GLN A . n A 1 139 TRP 139 155 155 TRP TRP A . n A 1 140 PHE 140 156 156 PHE PHE A . n A 1 141 LEU 141 157 157 LEU LEU A . n A 1 142 VAL 142 158 158 VAL VAL A . n A 1 143 LYS 143 159 159 LYS LYS A . n A 1 144 ALA 144 160 160 ALA ALA A . n A 1 145 LYS 145 161 161 LYS LYS A . n A 1 146 ASP 146 162 162 ASP ASP A . n A 1 147 GLY 147 163 163 GLY GLY A . n A 1 148 GLU 148 164 164 GLU GLU A . n A 1 149 ALA 149 165 165 ALA ALA A . n A 1 150 ARG 150 166 166 ARG ARG A . n A 1 151 SER 151 167 167 SER SER A . n A 1 152 LEU 152 168 168 LEU LEU A . n A 1 153 ASP 153 169 169 ASP ASP A . n A 1 154 ARG 154 170 170 ARG ARG A . n A 1 155 PHE 155 171 171 PHE PHE A . n A 1 156 ASP 156 172 172 ASP ASP A . n A 1 157 VAL 157 173 173 VAL VAL A . n A 1 158 LEU 158 174 174 LEU LEU A . n A 1 159 LYS 159 175 175 LYS LYS A . n A 1 160 GLU 160 176 176 GLU GLU A . n A 1 161 ARG 161 177 177 ARG ARG A . n A 1 162 PRO 162 178 178 PRO PRO A . n A 1 163 ASP 163 179 179 ASP ASP A . n A 1 164 SER 164 180 180 SER SER A . n A 1 165 VAL 165 181 181 VAL VAL A . n A 1 166 LEU 166 182 182 LEU LEU A . n A 1 167 SER 167 183 183 SER SER A . n A 1 168 GLU 168 184 ? ? ? A . n A 1 169 ARG 169 185 ? ? ? A . n A 1 170 THR 170 186 ? ? ? A . n A 1 171 LEU 171 187 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN 1 1 1 MN MN A . C 3 SO4 1 188 1 SO4 SO4 A . D 3 SO4 1 2 2 SO4 SO4 A . E 4 YT3 1 189 1 YT3 YT3 A . F 4 YT3 1 190 2 YT3 YT3 A . G 5 HOH 1 3 3 HOH HOH A . G 5 HOH 2 4 4 HOH HOH A . G 5 HOH 3 5 5 HOH HOH A . G 5 HOH 4 6 6 HOH HOH A . G 5 HOH 5 7 7 HOH HOH A . G 5 HOH 6 8 8 HOH HOH A . G 5 HOH 7 9 9 HOH HOH A . G 5 HOH 8 10 10 HOH HOH A . G 5 HOH 9 11 11 HOH HOH A . G 5 HOH 10 12 12 HOH HOH A . G 5 HOH 11 13 13 HOH HOH A . G 5 HOH 12 14 14 HOH HOH A . G 5 HOH 13 15 15 HOH HOH A . G 5 HOH 14 16 16 HOH HOH A . G 5 HOH 15 191 1 HOH HOH A . G 5 HOH 16 192 2 HOH HOH A . G 5 HOH 17 193 17 HOH HOH A . G 5 HOH 18 194 18 HOH HOH A . G 5 HOH 19 195 19 HOH HOH A . G 5 HOH 20 196 20 HOH HOH A . G 5 HOH 21 197 21 HOH HOH A . G 5 HOH 22 198 22 HOH HOH A . G 5 HOH 23 199 23 HOH HOH A . G 5 HOH 24 200 24 HOH HOH A . G 5 HOH 25 201 25 HOH HOH A . G 5 HOH 26 202 26 HOH HOH A . G 5 HOH 27 203 27 HOH HOH A . G 5 HOH 28 204 28 HOH HOH A . G 5 HOH 29 205 29 HOH HOH A . G 5 HOH 30 206 30 HOH HOH A . G 5 HOH 31 207 31 HOH HOH A . G 5 HOH 32 208 32 HOH HOH A . G 5 HOH 33 209 33 HOH HOH A . G 5 HOH 34 210 34 HOH HOH A . G 5 HOH 35 211 35 HOH HOH A . G 5 HOH 36 212 36 HOH HOH A . G 5 HOH 37 213 37 HOH HOH A . G 5 HOH 38 214 38 HOH HOH A . G 5 HOH 39 215 39 HOH HOH A . G 5 HOH 40 216 40 HOH HOH A . G 5 HOH 41 217 41 HOH HOH A . G 5 HOH 42 218 42 HOH HOH A . G 5 HOH 43 219 43 HOH HOH A . G 5 HOH 44 220 44 HOH HOH A . G 5 HOH 45 221 45 HOH HOH A . G 5 HOH 46 222 46 HOH HOH A . G 5 HOH 47 223 47 HOH HOH A . G 5 HOH 48 224 48 HOH HOH A . G 5 HOH 49 225 49 HOH HOH A . G 5 HOH 50 226 50 HOH HOH A . G 5 HOH 51 227 51 HOH HOH A . G 5 HOH 52 228 52 HOH HOH A . G 5 HOH 53 229 53 HOH HOH A . G 5 HOH 54 230 54 HOH HOH A . G 5 HOH 55 231 55 HOH HOH A . G 5 HOH 56 232 56 HOH HOH A . G 5 HOH 57 233 57 HOH HOH A . G 5 HOH 58 234 58 HOH HOH A . G 5 HOH 59 235 59 HOH HOH A . G 5 HOH 60 236 60 HOH HOH A . G 5 HOH 61 237 61 HOH HOH A . G 5 HOH 62 238 62 HOH HOH A . G 5 HOH 63 239 63 HOH HOH A . G 5 HOH 64 240 64 HOH HOH A . G 5 HOH 65 241 65 HOH HOH A . G 5 HOH 66 242 66 HOH HOH A . G 5 HOH 67 243 67 HOH HOH A . G 5 HOH 68 244 68 HOH HOH A . G 5 HOH 69 245 69 HOH HOH A . G 5 HOH 70 246 70 HOH HOH A . G 5 HOH 71 247 71 HOH HOH A . G 5 HOH 72 248 72 HOH HOH A . G 5 HOH 73 249 73 HOH HOH A . G 5 HOH 74 250 74 HOH HOH A . G 5 HOH 75 251 75 HOH HOH A . G 5 HOH 76 252 76 HOH HOH A . G 5 HOH 77 253 77 HOH HOH A . G 5 HOH 78 254 78 HOH HOH A . G 5 HOH 79 255 79 HOH HOH A . G 5 HOH 80 256 80 HOH HOH A . G 5 HOH 81 257 81 HOH HOH A . G 5 HOH 82 258 82 HOH HOH A . G 5 HOH 83 259 83 HOH HOH A . G 5 HOH 84 260 84 HOH HOH A . G 5 HOH 85 261 85 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id YT3 _pdbx_struct_special_symmetry.auth_seq_id 189 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id YT3 _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 26 ? A HIS 42 ? 1_555 MN ? B MN . ? A MN 1 ? 1_555 NE2 ? A HIS 32 ? A HIS 48 ? 1_555 98.9 ? 2 ND1 ? A HIS 26 ? A HIS 42 ? 1_555 MN ? B MN . ? A MN 1 ? 1_555 OD2 ? A ASP 34 ? A ASP 50 ? 1_555 97.7 ? 3 NE2 ? A HIS 32 ? A HIS 48 ? 1_555 MN ? B MN . ? A MN 1 ? 1_555 OD2 ? A ASP 34 ? A ASP 50 ? 1_555 93.2 ? 4 ND1 ? A HIS 26 ? A HIS 42 ? 1_555 MN ? B MN . ? A MN 1 ? 1_555 O3 ? C SO4 . ? A SO4 188 ? 1_555 86.9 ? 5 NE2 ? A HIS 32 ? A HIS 48 ? 1_555 MN ? B MN . ? A MN 1 ? 1_555 O3 ? C SO4 . ? A SO4 188 ? 1_555 173.9 ? 6 OD2 ? A ASP 34 ? A ASP 50 ? 1_555 MN ? B MN . ? A MN 1 ? 1_555 O3 ? C SO4 . ? A SO4 188 ? 1_555 84.0 ? 7 O4 ? D SO4 . ? A SO4 2 ? 1_555 Y ? F YT3 . ? A YT3 190 ? 1_555 OE1 ? A GLU 119 ? A GLU 135 ? 1_555 87.7 ? 8 O4 ? D SO4 . ? A SO4 2 ? 1_555 Y ? F YT3 . ? A YT3 190 ? 1_555 OE2 ? A GLU 119 ? A GLU 135 ? 1_555 136.1 ? 9 OE1 ? A GLU 119 ? A GLU 135 ? 1_555 Y ? F YT3 . ? A YT3 190 ? 1_555 OE2 ? A GLU 119 ? A GLU 135 ? 1_555 48.5 ? 10 O4 ? D SO4 . ? A SO4 2 ? 1_555 Y ? F YT3 . ? A YT3 190 ? 1_555 O ? G HOH . ? A HOH 254 ? 1_555 89.5 ? 11 OE1 ? A GLU 119 ? A GLU 135 ? 1_555 Y ? F YT3 . ? A YT3 190 ? 1_555 O ? G HOH . ? A HOH 254 ? 1_555 75.6 ? 12 OE2 ? A GLU 119 ? A GLU 135 ? 1_555 Y ? F YT3 . ? A YT3 190 ? 1_555 O ? G HOH . ? A HOH 254 ? 1_555 82.4 ? 13 OE2 ? A GLU 105 ? A GLU 121 ? 1_555 Y ? E YT3 . ? A YT3 189 ? 1_555 OE1 ? A GLU 105 ? A GLU 121 ? 1_555 44.3 ? 14 OE2 ? A GLU 105 ? A GLU 121 ? 1_555 Y ? E YT3 . ? A YT3 189 ? 1_555 OE1 ? A GLU 108 ? A GLU 124 ? 1_555 75.0 ? 15 OE1 ? A GLU 105 ? A GLU 121 ? 1_555 Y ? E YT3 . ? A YT3 189 ? 1_555 OE1 ? A GLU 108 ? A GLU 124 ? 1_555 72.3 ? 16 OE2 ? A GLU 105 ? A GLU 121 ? 1_555 Y ? E YT3 . ? A YT3 189 ? 1_555 OE2 ? A GLU 108 ? A GLU 124 ? 1_555 103.3 ? 17 OE1 ? A GLU 105 ? A GLU 121 ? 1_555 Y ? E YT3 . ? A YT3 189 ? 1_555 OE2 ? A GLU 108 ? A GLU 124 ? 1_555 69.8 ? 18 OE1 ? A GLU 108 ? A GLU 124 ? 1_555 Y ? E YT3 . ? A YT3 189 ? 1_555 OE2 ? A GLU 108 ? A GLU 124 ? 1_555 47.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6_289)' ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 81 ? ? -128.92 -166.42 2 1 LYS A 151 ? ? -146.41 31.22 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 97 ? CG ? A GLN 81 CG 2 1 Y 1 A GLN 97 ? CD ? A GLN 81 CD 3 1 Y 1 A GLN 97 ? OE1 ? A GLN 81 OE1 4 1 Y 1 A GLN 97 ? NE2 ? A GLN 81 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 17 ? A ARG 1 2 1 Y 1 A GLN 18 ? A GLN 2 3 1 Y 1 A THR 19 ? A THR 3 4 1 Y 1 A PRO 20 ? A PRO 4 5 1 Y 1 A GLU 21 ? A GLU 5 6 1 Y 1 A PRO 22 ? A PRO 6 7 1 Y 1 A SER 23 ? A SER 7 8 1 Y 1 A GLY 24 ? A GLY 8 9 1 Y 1 A ARG 25 ? A ARG 9 10 1 Y 1 A LYS 26 ? A LYS 10 11 1 Y 1 A PRO 27 ? A PRO 11 12 1 Y 1 A ARG 28 ? A ARG 12 13 1 Y 1 A LYS 29 ? A LYS 13 14 1 Y 1 A ASP 30 ? A ASP 14 15 1 Y 1 A SER 31 ? A SER 15 16 1 Y 1 A THR 32 ? A THR 16 17 1 Y 1 A GLY 33 ? A GLY 17 18 1 Y 1 A TYR 100 ? A TYR 84 19 1 Y 1 A GLY 101 ? A GLY 85 20 1 Y 1 A GLU 184 ? A GLU 168 21 1 Y 1 A ARG 185 ? A ARG 169 22 1 Y 1 A THR 186 ? A THR 170 23 1 Y 1 A LEU 187 ? A LEU 171 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MN MN MN N N 230 PHE N N N N 231 PHE CA C N S 232 PHE C C N N 233 PHE O O N N 234 PHE CB C N N 235 PHE CG C Y N 236 PHE CD1 C Y N 237 PHE CD2 C Y N 238 PHE CE1 C Y N 239 PHE CE2 C Y N 240 PHE CZ C Y N 241 PHE OXT O N N 242 PHE H H N N 243 PHE H2 H N N 244 PHE HA H N N 245 PHE HB2 H N N 246 PHE HB3 H N N 247 PHE HD1 H N N 248 PHE HD2 H N N 249 PHE HE1 H N N 250 PHE HE2 H N N 251 PHE HZ H N N 252 PHE HXT H N N 253 PRO N N N N 254 PRO CA C N S 255 PRO C C N N 256 PRO O O N N 257 PRO CB C N N 258 PRO CG C N N 259 PRO CD C N N 260 PRO OXT O N N 261 PRO H H N N 262 PRO HA H N N 263 PRO HB2 H N N 264 PRO HB3 H N N 265 PRO HG2 H N N 266 PRO HG3 H N N 267 PRO HD2 H N N 268 PRO HD3 H N N 269 PRO HXT H N N 270 SER N N N N 271 SER CA C N S 272 SER C C N N 273 SER O O N N 274 SER CB C N N 275 SER OG O N N 276 SER OXT O N N 277 SER H H N N 278 SER H2 H N N 279 SER HA H N N 280 SER HB2 H N N 281 SER HB3 H N N 282 SER HG H N N 283 SER HXT H N N 284 SO4 S S N N 285 SO4 O1 O N N 286 SO4 O2 O N N 287 SO4 O3 O N N 288 SO4 O4 O N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 YT3 Y Y N N 377 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 PHE N CA sing N N 218 PHE N H sing N N 219 PHE N H2 sing N N 220 PHE CA C sing N N 221 PHE CA CB sing N N 222 PHE CA HA sing N N 223 PHE C O doub N N 224 PHE C OXT sing N N 225 PHE CB CG sing N N 226 PHE CB HB2 sing N N 227 PHE CB HB3 sing N N 228 PHE CG CD1 doub Y N 229 PHE CG CD2 sing Y N 230 PHE CD1 CE1 sing Y N 231 PHE CD1 HD1 sing N N 232 PHE CD2 CE2 doub Y N 233 PHE CD2 HD2 sing N N 234 PHE CE1 CZ doub Y N 235 PHE CE1 HE1 sing N N 236 PHE CE2 CZ sing Y N 237 PHE CE2 HE2 sing N N 238 PHE CZ HZ sing N N 239 PHE OXT HXT sing N N 240 PRO N CA sing N N 241 PRO N CD sing N N 242 PRO N H sing N N 243 PRO CA C sing N N 244 PRO CA CB sing N N 245 PRO CA HA sing N N 246 PRO C O doub N N 247 PRO C OXT sing N N 248 PRO CB CG sing N N 249 PRO CB HB2 sing N N 250 PRO CB HB3 sing N N 251 PRO CG CD sing N N 252 PRO CG HG2 sing N N 253 PRO CG HG3 sing N N 254 PRO CD HD2 sing N N 255 PRO CD HD3 sing N N 256 PRO OXT HXT sing N N 257 SER N CA sing N N 258 SER N H sing N N 259 SER N H2 sing N N 260 SER CA C sing N N 261 SER CA CB sing N N 262 SER CA HA sing N N 263 SER C O doub N N 264 SER C OXT sing N N 265 SER CB OG sing N N 266 SER CB HB2 sing N N 267 SER CB HB3 sing N N 268 SER OG HG sing N N 269 SER OXT HXT sing N N 270 SO4 S O1 doub N N 271 SO4 S O2 doub N N 272 SO4 S O3 sing N N 273 SO4 S O4 sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MANGANESE (II) ION' MN 3 'SULFATE ION' SO4 4 'YTTRIUM (III) ION' YT3 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3N9B _pdbx_initial_refinement_model.details 'chain A of PDB entry 3N9B' #