data_3NA6 # _entry.id 3NA6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NA6 pdb_00003na6 10.2210/pdb3na6/pdb RCSB RCSB059573 ? ? WWPDB D_1000059573 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 375176 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3NA6 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-06-01 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a succinylglutamate desuccinylase (TM1040_2694) from SILICIBACTER SP. TM1040 at 2.00 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3NA6 _cell.length_a 99.773 _cell.length_b 99.773 _cell.length_c 137.179 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NA6 _symmetry.Int_Tables_number 182 _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Succinylglutamate desuccinylase/aspartoacylase' 36263.230 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 5 water nat water 18.015 313 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)KDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSV(MSE)IPITVIQNGAGKTALLTGANHGDEYEGPVALQEL AATTRAEDVTGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGTVTQKIADYFQRTLLP(MSE)ADVAVDFHSGG KTLDFVPFAAAHILEDKVLQDACFAA(MSE)QAFNAPYSVQLLEIDSEG(MSE)YDTAVEE(MSE)GKVLVTTELGGGG (MSE)STARSNAIAKKGLRNVLIHFGILQGE(MSE)QIDPSVTLD(MSE)PDGDCYLFSEHDGLFEI(MSE)IDLGEPVQ EGDLVARVWSPDRTGEAPVEYRARRSGVLISRHFPG(MSE)IKSGDCAAVIGVVEG ; _entity_poly.pdbx_seq_one_letter_code_can ;GMKDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSVMIPITVIQNGAGKTALLTGANHGDEYEGPVALQELAATTRAED VTGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGTVTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFAAAH ILEDKVLQDACFAAMQAFNAPYSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMSTARSNAIAKKGLRNVLIHFGILQ GEMQIDPSVTLDMPDGDCYLFSEHDGLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHFPGMIKSG DCAAVIGVVEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 375176 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 LYS n 1 4 ASP n 1 5 ASN n 1 6 PRO n 1 7 ILE n 1 8 SER n 1 9 PRO n 1 10 THR n 1 11 ILE n 1 12 PRO n 1 13 LEU n 1 14 ASP n 1 15 GLN n 1 16 ASP n 1 17 GLY n 1 18 VAL n 1 19 HIS n 1 20 HIS n 1 21 GLY n 1 22 PHE n 1 23 LEU n 1 24 LYS n 1 25 LEU n 1 26 PRO n 1 27 TYR n 1 28 SER n 1 29 ARG n 1 30 ASP n 1 31 ASP n 1 32 SER n 1 33 ALA n 1 34 TRP n 1 35 GLY n 1 36 SER n 1 37 VAL n 1 38 MSE n 1 39 ILE n 1 40 PRO n 1 41 ILE n 1 42 THR n 1 43 VAL n 1 44 ILE n 1 45 GLN n 1 46 ASN n 1 47 GLY n 1 48 ALA n 1 49 GLY n 1 50 LYS n 1 51 THR n 1 52 ALA n 1 53 LEU n 1 54 LEU n 1 55 THR n 1 56 GLY n 1 57 ALA n 1 58 ASN n 1 59 HIS n 1 60 GLY n 1 61 ASP n 1 62 GLU n 1 63 TYR n 1 64 GLU n 1 65 GLY n 1 66 PRO n 1 67 VAL n 1 68 ALA n 1 69 LEU n 1 70 GLN n 1 71 GLU n 1 72 LEU n 1 73 ALA n 1 74 ALA n 1 75 THR n 1 76 THR n 1 77 ARG n 1 78 ALA n 1 79 GLU n 1 80 ASP n 1 81 VAL n 1 82 THR n 1 83 GLY n 1 84 ARG n 1 85 LEU n 1 86 ILE n 1 87 ILE n 1 88 VAL n 1 89 PRO n 1 90 TYR n 1 91 PHE n 1 92 ASN n 1 93 TYR n 1 94 PRO n 1 95 ALA n 1 96 PHE n 1 97 ARG n 1 98 ALA n 1 99 SER n 1 100 ALA n 1 101 ARG n 1 102 THR n 1 103 SER n 1 104 PRO n 1 105 ILE n 1 106 ASP n 1 107 ARG n 1 108 GLY n 1 109 ASN n 1 110 LEU n 1 111 ASN n 1 112 ARG n 1 113 ALA n 1 114 PHE n 1 115 PRO n 1 116 GLY n 1 117 ARG n 1 118 PRO n 1 119 ASP n 1 120 GLY n 1 121 THR n 1 122 VAL n 1 123 THR n 1 124 GLN n 1 125 LYS n 1 126 ILE n 1 127 ALA n 1 128 ASP n 1 129 TYR n 1 130 PHE n 1 131 GLN n 1 132 ARG n 1 133 THR n 1 134 LEU n 1 135 LEU n 1 136 PRO n 1 137 MSE n 1 138 ALA n 1 139 ASP n 1 140 VAL n 1 141 ALA n 1 142 VAL n 1 143 ASP n 1 144 PHE n 1 145 HIS n 1 146 SER n 1 147 GLY n 1 148 GLY n 1 149 LYS n 1 150 THR n 1 151 LEU n 1 152 ASP n 1 153 PHE n 1 154 VAL n 1 155 PRO n 1 156 PHE n 1 157 ALA n 1 158 ALA n 1 159 ALA n 1 160 HIS n 1 161 ILE n 1 162 LEU n 1 163 GLU n 1 164 ASP n 1 165 LYS n 1 166 VAL n 1 167 LEU n 1 168 GLN n 1 169 ASP n 1 170 ALA n 1 171 CYS n 1 172 PHE n 1 173 ALA n 1 174 ALA n 1 175 MSE n 1 176 GLN n 1 177 ALA n 1 178 PHE n 1 179 ASN n 1 180 ALA n 1 181 PRO n 1 182 TYR n 1 183 SER n 1 184 VAL n 1 185 GLN n 1 186 LEU n 1 187 LEU n 1 188 GLU n 1 189 ILE n 1 190 ASP n 1 191 SER n 1 192 GLU n 1 193 GLY n 1 194 MSE n 1 195 TYR n 1 196 ASP n 1 197 THR n 1 198 ALA n 1 199 VAL n 1 200 GLU n 1 201 GLU n 1 202 MSE n 1 203 GLY n 1 204 LYS n 1 205 VAL n 1 206 LEU n 1 207 VAL n 1 208 THR n 1 209 THR n 1 210 GLU n 1 211 LEU n 1 212 GLY n 1 213 GLY n 1 214 GLY n 1 215 GLY n 1 216 MSE n 1 217 SER n 1 218 THR n 1 219 ALA n 1 220 ARG n 1 221 SER n 1 222 ASN n 1 223 ALA n 1 224 ILE n 1 225 ALA n 1 226 LYS n 1 227 LYS n 1 228 GLY n 1 229 LEU n 1 230 ARG n 1 231 ASN n 1 232 VAL n 1 233 LEU n 1 234 ILE n 1 235 HIS n 1 236 PHE n 1 237 GLY n 1 238 ILE n 1 239 LEU n 1 240 GLN n 1 241 GLY n 1 242 GLU n 1 243 MSE n 1 244 GLN n 1 245 ILE n 1 246 ASP n 1 247 PRO n 1 248 SER n 1 249 VAL n 1 250 THR n 1 251 LEU n 1 252 ASP n 1 253 MSE n 1 254 PRO n 1 255 ASP n 1 256 GLY n 1 257 ASP n 1 258 CYS n 1 259 TYR n 1 260 LEU n 1 261 PHE n 1 262 SER n 1 263 GLU n 1 264 HIS n 1 265 ASP n 1 266 GLY n 1 267 LEU n 1 268 PHE n 1 269 GLU n 1 270 ILE n 1 271 MSE n 1 272 ILE n 1 273 ASP n 1 274 LEU n 1 275 GLY n 1 276 GLU n 1 277 PRO n 1 278 VAL n 1 279 GLN n 1 280 GLU n 1 281 GLY n 1 282 ASP n 1 283 LEU n 1 284 VAL n 1 285 ALA n 1 286 ARG n 1 287 VAL n 1 288 TRP n 1 289 SER n 1 290 PRO n 1 291 ASP n 1 292 ARG n 1 293 THR n 1 294 GLY n 1 295 GLU n 1 296 ALA n 1 297 PRO n 1 298 VAL n 1 299 GLU n 1 300 TYR n 1 301 ARG n 1 302 ALA n 1 303 ARG n 1 304 ARG n 1 305 SER n 1 306 GLY n 1 307 VAL n 1 308 LEU n 1 309 ILE n 1 310 SER n 1 311 ARG n 1 312 HIS n 1 313 PHE n 1 314 PRO n 1 315 GLY n 1 316 MSE n 1 317 ILE n 1 318 LYS n 1 319 SER n 1 320 GLY n 1 321 ASP n 1 322 CYS n 1 323 ALA n 1 324 ALA n 1 325 VAL n 1 326 ILE n 1 327 GLY n 1 328 VAL n 1 329 VAL n 1 330 GLU n 1 331 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TM1040_2694 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ruegeria sp. TM1040' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 292414 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q1GD40_SILST _struct_ref.pdbx_db_accession Q1GD40 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSVMIPITVIQNGAGKTALLTGANHGDEYEGPVALQELAATTRAEDV TGRLIIVPYFNYPAFRASARTSPIDRGNLNRAFPGRPDGTVTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFAAAHI LEDKVLQDACFAAMQAFNAPYSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMSTARSNAIAKKGLRNVLIHFGILQG EMQIDPSVTLDMPDGDCYLFSEHDGLFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHFPGMIKSGD CAAVIGVVEG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NA6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 331 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q1GD40 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 330 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 330 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3NA6 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q1GD40 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3NA6 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.72 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;0.2000M NaCl, 30.0000% PEG-3000, 0.1M TRIS pH 7.0, 0.006 M Calcium Chloride, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat collimating mirror, toroid focusing mirror' _diffrn_detector.pdbx_collection_date 2010-03-11 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97922 1.0 3 0.97905 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91837,0.97922,0.97905 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3NA6 _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 29.487 _reflns.number_obs 27876 _reflns.pdbx_Rmerge_I_obs 0.157 _reflns.pdbx_netI_over_sigmaI 11.560 _reflns.percent_possible_obs 99.500 _reflns.B_iso_Wilson_estimate 28.032 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.00 2.07 37250 ? 4903 0.013 1.8 ? ? ? ? ? 96.60 ? 1 2.07 2.15 38330 ? 4996 0.013 2.3 ? ? ? ? ? 99.80 ? 2 2.15 2.25 40682 ? 5293 0.013 2.8 ? ? ? ? ? 99.90 ? 3 2.25 2.37 40453 ? 5250 0.013 3.8 ? ? ? ? ? 99.90 ? 4 2.37 2.52 40314 ? 5208 0.013 4.8 ? ? ? ? ? 99.80 ? 5 2.52 2.71 39233 ? 5066 0.013 6.6 ? ? ? ? ? 99.90 ? 6 2.71 2.99 41142 ? 5299 0.013 9.8 ? ? ? ? ? 99.80 ? 7 2.99 3.42 40084 ? 5149 0.013 16.3 ? ? ? ? ? 100.00 ? 8 3.42 4.30 39942 ? 5138 0.013 27.7 ? ? ? ? ? 100.00 ? 9 4.30 29.487 40549 ? 5232 0.013 39.1 ? ? ? ? ? 99.60 ? 10 # _refine.entry_id 3NA6 _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 29.487 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.740 _refine.ls_number_reflns_obs 27844 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;(1) HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. (2) A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. (3) ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS.(4) WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. (5) CHLORIDE (CL), CALCIUM (CA) AND TRIS (TRS) IONS ARE MODELED FROM CRYSTALLIZATION CONDITION. (6) REGION OF RESIDUES 251-256 CONTAINS POOR ELECTRON DENSITY. MODEL AT THIS REGION IS NOT RELIABLE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.163 _refine.ls_R_factor_R_work 0.161 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.195 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1397 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 29.563 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.920 _refine.aniso_B[2][2] 0.920 _refine.aniso_B[3][3] -1.380 _refine.aniso_B[1][2] 0.460 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.131 _refine.overall_SU_ML 0.085 _refine.overall_SU_B 5.725 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 105.44 _refine.B_iso_min 11.38 _refine.occupancy_max 1.00 _refine.occupancy_min 0.37 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2493 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 313 _refine_hist.number_atoms_total 2816 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 29.487 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2650 0.015 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1787 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3611 1.513 1.966 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 4353 0.894 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 346 6.526 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 120 35.242 23.750 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 424 14.023 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 21 24.762 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 396 0.094 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 3049 0.007 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 542 0.001 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1690 1.724 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 687 0.496 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2728 2.817 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 960 5.160 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 883 7.279 11.000 ? ? # _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.350 _refine_ls_shell.number_reflns_R_work 1846 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.216 _refine_ls_shell.R_factor_R_free 0.254 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 120 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1966 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3NA6 _struct.title 'Crystal structure of a succinylglutamate desuccinylase (TM1040_2694) from SILICIBACTER SP. TM1040 at 2.00 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3NA6 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 63 ? THR A 76 ? TYR A 62 THR A 75 1 ? 14 HELX_P HELX_P2 2 ARG A 77 ? VAL A 81 ? ARG A 76 VAL A 80 5 ? 5 HELX_P HELX_P3 3 ASN A 92 ? ALA A 98 ? ASN A 91 ALA A 97 1 ? 7 HELX_P HELX_P4 4 ASN A 109 ? ALA A 113 ? ASN A 108 ALA A 112 5 ? 5 HELX_P HELX_P5 5 THR A 121 ? THR A 133 ? THR A 120 THR A 132 1 ? 13 HELX_P HELX_P6 6 LEU A 134 ? ALA A 138 ? LEU A 133 ALA A 137 5 ? 5 HELX_P HELX_P7 7 ASP A 164 ? ASN A 179 ? ASP A 163 ASN A 178 1 ? 16 HELX_P HELX_P8 8 MSE A 194 ? GLU A 201 ? MSE A 193 GLU A 200 1 ? 8 HELX_P HELX_P9 9 THR A 218 ? PHE A 236 ? THR A 217 PHE A 235 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 258 SG ? ? ? 1_555 A CYS 322 SG ? ? A CYS 257 A CYS 321 1_555 ? ? ? ? ? ? ? 2.072 ? ? covale1 covale both ? A MSE 2 C ? ? ? 1_555 A LYS 3 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale2 covale both ? A VAL 37 C ? ? ? 1_555 A MSE 38 N ? ? A VAL 36 A MSE 37 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A MSE 38 C ? ? ? 1_555 A ILE 39 N ? ? A MSE 37 A ILE 38 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? A PRO 136 C ? ? ? 1_555 A MSE 137 N A ? A PRO 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A PRO 136 C ? ? ? 1_555 A MSE 137 N B ? A PRO 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale6 covale both ? A MSE 137 C A ? ? 1_555 A ALA 138 N ? ? A MSE 136 A ALA 137 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? A MSE 137 C B ? ? 1_555 A ALA 138 N ? ? A MSE 136 A ALA 137 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale8 covale both ? A ALA 174 C ? ? ? 1_555 A MSE 175 N ? ? A ALA 173 A MSE 174 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale9 covale both ? A MSE 175 C ? ? ? 1_555 A GLN 176 N ? ? A MSE 174 A GLN 175 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale10 covale both ? A GLY 193 C ? ? ? 1_555 A MSE 194 N ? ? A GLY 192 A MSE 193 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale11 covale both ? A MSE 194 C ? ? ? 1_555 A TYR 195 N ? ? A MSE 193 A TYR 194 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale12 covale both ? A GLU 201 C ? ? ? 1_555 A MSE 202 N ? ? A GLU 200 A MSE 201 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale13 covale both ? A MSE 202 C ? ? ? 1_555 A GLY 203 N ? ? A MSE 201 A GLY 202 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale14 covale both ? A GLY 215 C ? ? ? 1_555 A MSE 216 N ? ? A GLY 214 A MSE 215 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale15 covale both ? A MSE 216 C ? ? ? 1_555 A SER 217 N ? ? A MSE 215 A SER 216 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale16 covale both ? A GLU 242 C A ? ? 1_555 A MSE 243 N ? ? A GLU 241 A MSE 242 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale17 covale both ? A GLU 242 C B ? ? 1_555 A MSE 243 N ? ? A GLU 241 A MSE 242 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale18 covale both ? A MSE 243 C ? ? ? 1_555 A GLN 244 N ? ? A MSE 242 A GLN 243 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale19 covale both ? A ASP 252 C ? ? ? 1_555 A MSE 253 N ? ? A ASP 251 A MSE 252 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale20 covale both ? A MSE 253 C ? ? ? 1_555 A PRO 254 N ? ? A MSE 252 A PRO 253 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale21 covale both ? A ILE 270 C ? ? ? 1_555 A MSE 271 N ? ? A ILE 269 A MSE 270 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale22 covale both ? A MSE 271 C ? ? ? 1_555 A ILE 272 N ? ? A MSE 270 A ILE 271 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale23 covale both ? A GLY 315 C ? ? ? 1_555 A MSE 316 N ? ? A GLY 314 A MSE 315 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale24 covale both ? A MSE 316 C ? ? ? 1_555 A ILE 317 N ? ? A MSE 315 A ILE 316 1_555 ? ? ? ? ? ? ? 1.342 ? ? metalc1 metalc ? ? A THR 82 OG1 ? ? ? 1_555 C CA . CA ? ? A THR 81 A CA 332 1_555 ? ? ? ? ? ? ? 2.586 ? ? metalc2 metalc ? ? A GLY 237 O ? ? ? 1_555 C CA . CA ? ? A GLY 236 A CA 332 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc3 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 332 A HOH 434 1_555 ? ? ? ? ? ? ? 2.620 ? ? metalc4 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 332 A HOH 565 1_555 ? ? ? ? ? ? ? 2.546 ? ? metalc5 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 332 A HOH 567 1_555 ? ? ? ? ? ? ? 2.526 ? ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 332 A HOH 568 1_555 ? ? ? ? ? ? ? 2.486 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 114 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 113 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 115 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 114 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 7.31 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 4 ? C ? 3 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? anti-parallel A 8 9 ? parallel A 9 10 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 8 ? PRO A 9 ? SER A 7 PRO A 8 A 2 GLY A 17 ? PRO A 26 ? GLY A 16 PRO A 25 A 3 SER A 36 ? ASN A 46 ? SER A 35 ASN A 45 A 4 GLY A 83 ? VAL A 88 ? GLY A 82 VAL A 87 A 5 THR A 51 ? THR A 55 ? THR A 50 THR A 54 A 6 VAL A 140 ? ASP A 143 ? VAL A 139 ASP A 142 A 7 VAL A 205 ? GLU A 210 ? VAL A 204 GLU A 209 A 8 PHE A 156 ? HIS A 160 ? PHE A 155 HIS A 159 A 9 TYR A 182 ? LEU A 186 ? TYR A 181 LEU A 185 A 10 VAL A 249 ? THR A 250 ? VAL A 248 THR A 249 B 1 LEU A 151 ? PHE A 153 ? LEU A 150 PHE A 152 B 2 GLY A 306 ? HIS A 312 ? GLY A 305 HIS A 311 B 3 CYS A 322 ? GLY A 327 ? CYS A 321 GLY A 326 B 4 LEU A 260 ? PHE A 261 ? LEU A 259 PHE A 260 C 1 LEU A 151 ? PHE A 153 ? LEU A 150 PHE A 152 C 2 GLY A 306 ? HIS A 312 ? GLY A 305 HIS A 311 C 3 PRO A 277 ? VAL A 278 ? PRO A 276 VAL A 277 D 1 VAL A 298 ? ARG A 301 ? VAL A 297 ARG A 300 D 2 LEU A 283 ? TRP A 288 ? LEU A 282 TRP A 287 D 3 GLY A 266 ? ILE A 270 ? GLY A 265 ILE A 269 D 4 MSE A 316 ? ILE A 317 ? MSE A 315 ILE A 316 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 8 ? N SER A 7 O LYS A 24 ? O LYS A 23 A 2 3 N GLY A 17 ? N GLY A 16 O GLN A 45 ? O GLN A 44 A 3 4 N ILE A 44 ? N ILE A 43 O LEU A 85 ? O LEU A 84 A 4 5 O ILE A 86 ? O ILE A 85 N LEU A 54 ? N LEU A 53 A 5 6 N THR A 55 ? N THR A 54 O VAL A 142 ? O VAL A 141 A 6 7 N ASP A 143 ? N ASP A 142 O VAL A 207 ? O VAL A 206 A 7 8 O THR A 208 ? O THR A 207 N ALA A 158 ? N ALA A 157 A 8 9 N ALA A 159 ? N ALA A 158 O LEU A 186 ? O LEU A 185 A 9 10 N SER A 183 ? N SER A 182 O VAL A 249 ? O VAL A 248 B 1 2 N ASP A 152 ? N ASP A 151 O ARG A 311 ? O ARG A 310 B 2 3 N VAL A 307 ? N VAL A 306 O GLY A 327 ? O GLY A 326 B 3 4 O ALA A 323 ? O ALA A 322 N LEU A 260 ? N LEU A 259 C 1 2 N ASP A 152 ? N ASP A 151 O ARG A 311 ? O ARG A 310 C 2 3 O GLY A 306 ? O GLY A 305 N VAL A 278 ? N VAL A 277 D 1 2 O TYR A 300 ? O TYR A 299 N VAL A 284 ? N VAL A 283 D 2 3 O ARG A 286 ? O ARG A 285 N GLU A 269 ? N GLU A 268 D 3 4 N GLY A 266 ? N GLY A 265 O ILE A 317 ? O ILE A 316 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 331 ? 5 'BINDING SITE FOR RESIDUE CL A 331' AC2 Software A CA 332 ? 6 'BINDING SITE FOR RESIDUE CA A 332' AC3 Software A TRS 333 ? 13 'BINDING SITE FOR RESIDUE TRS A 333' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 59 ? HIS A 58 . ? 1_555 ? 2 AC1 5 ARG A 101 ? ARG A 100 . ? 1_555 ? 3 AC1 5 ASN A 109 ? ASN A 108 . ? 1_555 ? 4 AC1 5 ASN A 111 ? ASN A 110 . ? 1_555 ? 5 AC1 5 ARG A 112 ? ARG A 111 . ? 1_555 ? 6 AC2 6 THR A 82 ? THR A 81 . ? 1_555 ? 7 AC2 6 GLY A 237 ? GLY A 236 . ? 1_555 ? 8 AC2 6 HOH E . ? HOH A 434 . ? 1_555 ? 9 AC2 6 HOH E . ? HOH A 565 . ? 1_555 ? 10 AC2 6 HOH E . ? HOH A 567 . ? 1_555 ? 11 AC2 6 HOH E . ? HOH A 568 . ? 1_555 ? 12 AC3 13 GLN A 45 ? GLN A 44 . ? 1_555 ? 13 AC3 13 GLY A 47 ? GLY A 46 . ? 1_555 ? 14 AC3 13 ALA A 48 ? ALA A 47 . ? 1_555 ? 15 AC3 13 GLY A 49 ? GLY A 48 . ? 1_555 ? 16 AC3 13 THR A 51 ? THR A 50 . ? 1_555 ? 17 AC3 13 GLY A 83 ? GLY A 82 . ? 1_555 ? 18 AC3 13 ARG A 84 ? ARG A 83 . ? 1_555 ? 19 AC3 13 HOH E . ? HOH A 367 . ? 1_555 ? 20 AC3 13 HOH E . ? HOH A 459 . ? 8_555 ? 21 AC3 13 HOH E . ? HOH A 469 . ? 1_555 ? 22 AC3 13 HOH E . ? HOH A 544 . ? 1_555 ? 23 AC3 13 HOH E . ? HOH A 580 . ? 1_555 ? 24 AC3 13 HOH E . ? HOH A 607 . ? 8_555 ? # _atom_sites.entry_id 3NA6 _atom_sites.fract_transf_matrix[1][1] 0.010023 _atom_sites.fract_transf_matrix[1][2] 0.005787 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011573 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007290 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 LYS 3 2 2 LYS LYS A . n A 1 4 ASP 4 3 3 ASP ASP A . n A 1 5 ASN 5 4 4 ASN ASN A . n A 1 6 PRO 6 5 5 PRO PRO A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 SER 8 7 7 SER SER A . n A 1 9 PRO 9 8 8 PRO PRO A . n A 1 10 THR 10 9 9 THR THR A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 ASP 14 13 13 ASP ASP A . n A 1 15 GLN 15 14 14 GLN GLN A . n A 1 16 ASP 16 15 15 ASP ASP A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 VAL 18 17 17 VAL VAL A . n A 1 19 HIS 19 18 18 HIS HIS A . n A 1 20 HIS 20 19 19 HIS HIS A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 PHE 22 21 21 PHE PHE A . n A 1 23 LEU 23 22 22 LEU LEU A . n A 1 24 LYS 24 23 23 LYS LYS A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 PRO 26 25 25 PRO PRO A . n A 1 27 TYR 27 26 26 TYR TYR A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 ASP 30 29 29 ASP ASP A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 SER 32 31 31 SER SER A . n A 1 33 ALA 33 32 32 ALA ALA A . n A 1 34 TRP 34 33 33 TRP TRP A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 MSE 38 37 37 MSE MSE A . n A 1 39 ILE 39 38 38 ILE ILE A . n A 1 40 PRO 40 39 39 PRO PRO A . n A 1 41 ILE 41 40 40 ILE ILE A . n A 1 42 THR 42 41 41 THR THR A . n A 1 43 VAL 43 42 42 VAL VAL A . n A 1 44 ILE 44 43 43 ILE ILE A . n A 1 45 GLN 45 44 44 GLN GLN A . n A 1 46 ASN 46 45 45 ASN ASN A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 ALA 48 47 47 ALA ALA A . n A 1 49 GLY 49 48 48 GLY GLY A . n A 1 50 LYS 50 49 49 LYS LYS A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 LEU 54 53 53 LEU LEU A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 ALA 57 56 56 ALA ALA A . n A 1 58 ASN 58 57 57 ASN ASN A . n A 1 59 HIS 59 58 58 HIS HIS A . n A 1 60 GLY 60 59 59 GLY GLY A . n A 1 61 ASP 61 60 60 ASP ASP A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 TYR 63 62 62 TYR TYR A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 PRO 66 65 65 PRO PRO A . n A 1 67 VAL 67 66 66 VAL VAL A . n A 1 68 ALA 68 67 67 ALA ALA A . n A 1 69 LEU 69 68 68 LEU LEU A . n A 1 70 GLN 70 69 69 GLN GLN A . n A 1 71 GLU 71 70 70 GLU GLU A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 ALA 73 72 72 ALA ALA A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 THR 75 74 74 THR THR A . n A 1 76 THR 76 75 75 THR THR A . n A 1 77 ARG 77 76 76 ARG ARG A . n A 1 78 ALA 78 77 77 ALA ALA A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 THR 82 81 81 THR THR A . n A 1 83 GLY 83 82 82 GLY GLY A . n A 1 84 ARG 84 83 83 ARG ARG A . n A 1 85 LEU 85 84 84 LEU LEU A . n A 1 86 ILE 86 85 85 ILE ILE A . n A 1 87 ILE 87 86 86 ILE ILE A . n A 1 88 VAL 88 87 87 VAL VAL A . n A 1 89 PRO 89 88 88 PRO PRO A . n A 1 90 TYR 90 89 89 TYR TYR A . n A 1 91 PHE 91 90 90 PHE PHE A . n A 1 92 ASN 92 91 91 ASN ASN A . n A 1 93 TYR 93 92 92 TYR TYR A . n A 1 94 PRO 94 93 93 PRO PRO A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 PHE 96 95 95 PHE PHE A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 SER 99 98 98 SER SER A . n A 1 100 ALA 100 99 99 ALA ALA A . n A 1 101 ARG 101 100 100 ARG ARG A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 SER 103 102 102 SER SER A . n A 1 104 PRO 104 103 103 PRO PRO A . n A 1 105 ILE 105 104 104 ILE ILE A . n A 1 106 ASP 106 105 105 ASP ASP A . n A 1 107 ARG 107 106 106 ARG ARG A . n A 1 108 GLY 108 107 107 GLY GLY A . n A 1 109 ASN 109 108 108 ASN ASN A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 ASN 111 110 110 ASN ASN A . n A 1 112 ARG 112 111 111 ARG ARG A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 PHE 114 113 113 PHE PHE A . n A 1 115 PRO 115 114 114 PRO PRO A . n A 1 116 GLY 116 115 115 GLY GLY A . n A 1 117 ARG 117 116 116 ARG ARG A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 ASP 119 118 118 ASP ASP A . n A 1 120 GLY 120 119 119 GLY GLY A . n A 1 121 THR 121 120 120 THR THR A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 THR 123 122 122 THR THR A . n A 1 124 GLN 124 123 123 GLN GLN A . n A 1 125 LYS 125 124 124 LYS LYS A . n A 1 126 ILE 126 125 125 ILE ILE A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 ASP 128 127 127 ASP ASP A . n A 1 129 TYR 129 128 128 TYR TYR A . n A 1 130 PHE 130 129 129 PHE PHE A . n A 1 131 GLN 131 130 130 GLN GLN A . n A 1 132 ARG 132 131 131 ARG ARG A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 LEU 135 134 134 LEU LEU A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 MSE 137 136 136 MSE MSE A . n A 1 138 ALA 138 137 137 ALA ALA A . n A 1 139 ASP 139 138 138 ASP ASP A . n A 1 140 VAL 140 139 139 VAL VAL A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 VAL 142 141 141 VAL VAL A . n A 1 143 ASP 143 142 142 ASP ASP A . n A 1 144 PHE 144 143 143 PHE PHE A . n A 1 145 HIS 145 144 144 HIS HIS A . n A 1 146 SER 146 145 145 SER SER A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 GLY 148 147 147 GLY GLY A . n A 1 149 LYS 149 148 148 LYS LYS A . n A 1 150 THR 150 149 149 THR THR A . n A 1 151 LEU 151 150 150 LEU LEU A . n A 1 152 ASP 152 151 151 ASP ASP A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 VAL 154 153 153 VAL VAL A . n A 1 155 PRO 155 154 154 PRO PRO A . n A 1 156 PHE 156 155 155 PHE PHE A . n A 1 157 ALA 157 156 156 ALA ALA A . n A 1 158 ALA 158 157 157 ALA ALA A . n A 1 159 ALA 159 158 158 ALA ALA A . n A 1 160 HIS 160 159 159 HIS HIS A . n A 1 161 ILE 161 160 160 ILE ILE A . n A 1 162 LEU 162 161 161 LEU LEU A . n A 1 163 GLU 163 162 162 GLU GLU A . n A 1 164 ASP 164 163 163 ASP ASP A . n A 1 165 LYS 165 164 164 LYS LYS A . n A 1 166 VAL 166 165 165 VAL VAL A . n A 1 167 LEU 167 166 166 LEU LEU A . n A 1 168 GLN 168 167 167 GLN GLN A . n A 1 169 ASP 169 168 168 ASP ASP A . n A 1 170 ALA 170 169 169 ALA ALA A . n A 1 171 CYS 171 170 170 CYS CYS A . n A 1 172 PHE 172 171 171 PHE PHE A . n A 1 173 ALA 173 172 172 ALA ALA A . n A 1 174 ALA 174 173 173 ALA ALA A . n A 1 175 MSE 175 174 174 MSE MSE A . n A 1 176 GLN 176 175 175 GLN GLN A . n A 1 177 ALA 177 176 176 ALA ALA A . n A 1 178 PHE 178 177 177 PHE PHE A . n A 1 179 ASN 179 178 178 ASN ASN A . n A 1 180 ALA 180 179 179 ALA ALA A . n A 1 181 PRO 181 180 180 PRO PRO A . n A 1 182 TYR 182 181 181 TYR TYR A . n A 1 183 SER 183 182 182 SER SER A . n A 1 184 VAL 184 183 183 VAL VAL A . n A 1 185 GLN 185 184 184 GLN GLN A . n A 1 186 LEU 186 185 185 LEU LEU A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 GLU 188 187 187 GLU GLU A . n A 1 189 ILE 189 188 188 ILE ILE A . n A 1 190 ASP 190 189 189 ASP ASP A . n A 1 191 SER 191 190 190 SER SER A . n A 1 192 GLU 192 191 191 GLU GLU A . n A 1 193 GLY 193 192 192 GLY GLY A . n A 1 194 MSE 194 193 193 MSE MSE A . n A 1 195 TYR 195 194 194 TYR TYR A . n A 1 196 ASP 196 195 195 ASP ASP A . n A 1 197 THR 197 196 196 THR THR A . n A 1 198 ALA 198 197 197 ALA ALA A . n A 1 199 VAL 199 198 198 VAL VAL A . n A 1 200 GLU 200 199 199 GLU GLU A . n A 1 201 GLU 201 200 200 GLU GLU A . n A 1 202 MSE 202 201 201 MSE MSE A . n A 1 203 GLY 203 202 202 GLY GLY A . n A 1 204 LYS 204 203 203 LYS LYS A . n A 1 205 VAL 205 204 204 VAL VAL A . n A 1 206 LEU 206 205 205 LEU LEU A . n A 1 207 VAL 207 206 206 VAL VAL A . n A 1 208 THR 208 207 207 THR THR A . n A 1 209 THR 209 208 208 THR THR A . n A 1 210 GLU 210 209 209 GLU GLU A . n A 1 211 LEU 211 210 210 LEU LEU A . n A 1 212 GLY 212 211 211 GLY GLY A . n A 1 213 GLY 213 212 212 GLY GLY A . n A 1 214 GLY 214 213 213 GLY GLY A . n A 1 215 GLY 215 214 214 GLY GLY A . n A 1 216 MSE 216 215 215 MSE MSE A . n A 1 217 SER 217 216 216 SER SER A . n A 1 218 THR 218 217 217 THR THR A . n A 1 219 ALA 219 218 218 ALA ALA A . n A 1 220 ARG 220 219 219 ARG ARG A . n A 1 221 SER 221 220 220 SER SER A . n A 1 222 ASN 222 221 221 ASN ASN A . n A 1 223 ALA 223 222 222 ALA ALA A . n A 1 224 ILE 224 223 223 ILE ILE A . n A 1 225 ALA 225 224 224 ALA ALA A . n A 1 226 LYS 226 225 225 LYS LYS A . n A 1 227 LYS 227 226 226 LYS LYS A . n A 1 228 GLY 228 227 227 GLY GLY A . n A 1 229 LEU 229 228 228 LEU LEU A . n A 1 230 ARG 230 229 229 ARG ARG A . n A 1 231 ASN 231 230 230 ASN ASN A . n A 1 232 VAL 232 231 231 VAL VAL A . n A 1 233 LEU 233 232 232 LEU LEU A . n A 1 234 ILE 234 233 233 ILE ILE A . n A 1 235 HIS 235 234 234 HIS HIS A . n A 1 236 PHE 236 235 235 PHE PHE A . n A 1 237 GLY 237 236 236 GLY GLY A . n A 1 238 ILE 238 237 237 ILE ILE A . n A 1 239 LEU 239 238 238 LEU LEU A . n A 1 240 GLN 240 239 239 GLN GLN A . n A 1 241 GLY 241 240 240 GLY GLY A . n A 1 242 GLU 242 241 241 GLU GLU A . n A 1 243 MSE 243 242 242 MSE MSE A . n A 1 244 GLN 244 243 243 GLN GLN A . n A 1 245 ILE 245 244 244 ILE ILE A . n A 1 246 ASP 246 245 245 ASP ASP A . n A 1 247 PRO 247 246 246 PRO PRO A . n A 1 248 SER 248 247 247 SER SER A . n A 1 249 VAL 249 248 248 VAL VAL A . n A 1 250 THR 250 249 249 THR THR A . n A 1 251 LEU 251 250 250 LEU LEU A . n A 1 252 ASP 252 251 251 ASP ASP A . n A 1 253 MSE 253 252 252 MSE MSE A . n A 1 254 PRO 254 253 253 PRO PRO A . n A 1 255 ASP 255 254 254 ASP ASP A . n A 1 256 GLY 256 255 255 GLY GLY A . n A 1 257 ASP 257 256 256 ASP ASP A . n A 1 258 CYS 258 257 257 CYS CYS A . n A 1 259 TYR 259 258 258 TYR TYR A . n A 1 260 LEU 260 259 259 LEU LEU A . n A 1 261 PHE 261 260 260 PHE PHE A . n A 1 262 SER 262 261 261 SER SER A . n A 1 263 GLU 263 262 262 GLU GLU A . n A 1 264 HIS 264 263 263 HIS HIS A . n A 1 265 ASP 265 264 264 ASP ASP A . n A 1 266 GLY 266 265 265 GLY GLY A . n A 1 267 LEU 267 266 266 LEU LEU A . n A 1 268 PHE 268 267 267 PHE PHE A . n A 1 269 GLU 269 268 268 GLU GLU A . n A 1 270 ILE 270 269 269 ILE ILE A . n A 1 271 MSE 271 270 270 MSE MSE A . n A 1 272 ILE 272 271 271 ILE ILE A . n A 1 273 ASP 273 272 272 ASP ASP A . n A 1 274 LEU 274 273 273 LEU LEU A . n A 1 275 GLY 275 274 274 GLY GLY A . n A 1 276 GLU 276 275 275 GLU GLU A . n A 1 277 PRO 277 276 276 PRO PRO A . n A 1 278 VAL 278 277 277 VAL VAL A . n A 1 279 GLN 279 278 278 GLN GLN A . n A 1 280 GLU 280 279 279 GLU GLU A . n A 1 281 GLY 281 280 280 GLY GLY A . n A 1 282 ASP 282 281 281 ASP ASP A . n A 1 283 LEU 283 282 282 LEU LEU A . n A 1 284 VAL 284 283 283 VAL VAL A . n A 1 285 ALA 285 284 284 ALA ALA A . n A 1 286 ARG 286 285 285 ARG ARG A . n A 1 287 VAL 287 286 286 VAL VAL A . n A 1 288 TRP 288 287 287 TRP TRP A . n A 1 289 SER 289 288 288 SER SER A . n A 1 290 PRO 290 289 289 PRO PRO A . n A 1 291 ASP 291 290 290 ASP ASP A . n A 1 292 ARG 292 291 291 ARG ARG A . n A 1 293 THR 293 292 292 THR THR A . n A 1 294 GLY 294 293 293 GLY GLY A . n A 1 295 GLU 295 294 294 GLU GLU A . n A 1 296 ALA 296 295 295 ALA ALA A . n A 1 297 PRO 297 296 296 PRO PRO A . n A 1 298 VAL 298 297 297 VAL VAL A . n A 1 299 GLU 299 298 298 GLU GLU A . n A 1 300 TYR 300 299 299 TYR TYR A . n A 1 301 ARG 301 300 300 ARG ARG A . n A 1 302 ALA 302 301 301 ALA ALA A . n A 1 303 ARG 303 302 302 ARG ARG A . n A 1 304 ARG 304 303 303 ARG ARG A . n A 1 305 SER 305 304 304 SER SER A . n A 1 306 GLY 306 305 305 GLY GLY A . n A 1 307 VAL 307 306 306 VAL VAL A . n A 1 308 LEU 308 307 307 LEU LEU A . n A 1 309 ILE 309 308 308 ILE ILE A . n A 1 310 SER 310 309 309 SER SER A . n A 1 311 ARG 311 310 310 ARG ARG A . n A 1 312 HIS 312 311 311 HIS HIS A . n A 1 313 PHE 313 312 312 PHE PHE A . n A 1 314 PRO 314 313 313 PRO PRO A . n A 1 315 GLY 315 314 314 GLY GLY A . n A 1 316 MSE 316 315 315 MSE MSE A . n A 1 317 ILE 317 316 316 ILE ILE A . n A 1 318 LYS 318 317 317 LYS LYS A . n A 1 319 SER 319 318 318 SER SER A . n A 1 320 GLY 320 319 319 GLY GLY A . n A 1 321 ASP 321 320 320 ASP ASP A . n A 1 322 CYS 322 321 321 CYS CYS A . n A 1 323 ALA 323 322 322 ALA ALA A . n A 1 324 ALA 324 323 323 ALA ALA A . n A 1 325 VAL 325 324 324 VAL VAL A . n A 1 326 ILE 326 325 325 ILE ILE A . n A 1 327 GLY 327 326 326 GLY GLY A . n A 1 328 VAL 328 327 327 VAL VAL A . n A 1 329 VAL 329 328 328 VAL VAL A . n A 1 330 GLU 330 329 329 GLU GLU A . n A 1 331 GLY 331 330 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 331 1 CL CL A . C 3 CA 1 332 2 CA CA A . D 4 TRS 1 333 3 TRS TRS A . E 5 HOH 1 334 4 HOH HOH A . E 5 HOH 2 335 5 HOH HOH A . E 5 HOH 3 336 6 HOH HOH A . E 5 HOH 4 337 7 HOH HOH A . E 5 HOH 5 338 8 HOH HOH A . E 5 HOH 6 339 9 HOH HOH A . E 5 HOH 7 340 10 HOH HOH A . E 5 HOH 8 341 11 HOH HOH A . E 5 HOH 9 342 12 HOH HOH A . E 5 HOH 10 343 13 HOH HOH A . E 5 HOH 11 344 14 HOH HOH A . E 5 HOH 12 345 15 HOH HOH A . E 5 HOH 13 346 16 HOH HOH A . E 5 HOH 14 347 17 HOH HOH A . E 5 HOH 15 348 18 HOH HOH A . E 5 HOH 16 349 19 HOH HOH A . E 5 HOH 17 350 20 HOH HOH A . E 5 HOH 18 351 21 HOH HOH A . E 5 HOH 19 352 22 HOH HOH A . E 5 HOH 20 353 23 HOH HOH A . E 5 HOH 21 354 24 HOH HOH A . E 5 HOH 22 355 25 HOH HOH A . E 5 HOH 23 356 26 HOH HOH A . E 5 HOH 24 357 27 HOH HOH A . E 5 HOH 25 358 28 HOH HOH A . E 5 HOH 26 359 29 HOH HOH A . E 5 HOH 27 360 30 HOH HOH A . E 5 HOH 28 361 31 HOH HOH A . E 5 HOH 29 362 32 HOH HOH A . E 5 HOH 30 363 33 HOH HOH A . E 5 HOH 31 364 34 HOH HOH A . E 5 HOH 32 365 35 HOH HOH A . E 5 HOH 33 366 36 HOH HOH A . E 5 HOH 34 367 37 HOH HOH A . E 5 HOH 35 368 38 HOH HOH A . E 5 HOH 36 369 39 HOH HOH A . E 5 HOH 37 370 40 HOH HOH A . E 5 HOH 38 371 41 HOH HOH A . E 5 HOH 39 372 42 HOH HOH A . E 5 HOH 40 373 43 HOH HOH A . E 5 HOH 41 374 44 HOH HOH A . E 5 HOH 42 375 45 HOH HOH A . E 5 HOH 43 376 46 HOH HOH A . E 5 HOH 44 377 47 HOH HOH A . E 5 HOH 45 378 48 HOH HOH A . E 5 HOH 46 379 49 HOH HOH A . E 5 HOH 47 380 50 HOH HOH A . E 5 HOH 48 381 51 HOH HOH A . E 5 HOH 49 382 52 HOH HOH A . E 5 HOH 50 383 53 HOH HOH A . E 5 HOH 51 384 54 HOH HOH A . E 5 HOH 52 385 55 HOH HOH A . E 5 HOH 53 386 56 HOH HOH A . E 5 HOH 54 387 57 HOH HOH A . E 5 HOH 55 388 58 HOH HOH A . E 5 HOH 56 389 59 HOH HOH A . E 5 HOH 57 390 60 HOH HOH A . E 5 HOH 58 391 61 HOH HOH A . E 5 HOH 59 392 62 HOH HOH A . E 5 HOH 60 393 63 HOH HOH A . E 5 HOH 61 394 64 HOH HOH A . E 5 HOH 62 395 65 HOH HOH A . E 5 HOH 63 396 66 HOH HOH A . E 5 HOH 64 397 67 HOH HOH A . E 5 HOH 65 398 68 HOH HOH A . E 5 HOH 66 399 69 HOH HOH A . E 5 HOH 67 400 70 HOH HOH A . E 5 HOH 68 401 71 HOH HOH A . E 5 HOH 69 402 72 HOH HOH A . E 5 HOH 70 403 73 HOH HOH A . E 5 HOH 71 404 74 HOH HOH A . E 5 HOH 72 405 75 HOH HOH A . E 5 HOH 73 406 76 HOH HOH A . E 5 HOH 74 407 77 HOH HOH A . E 5 HOH 75 408 78 HOH HOH A . E 5 HOH 76 409 79 HOH HOH A . E 5 HOH 77 410 80 HOH HOH A . E 5 HOH 78 411 81 HOH HOH A . E 5 HOH 79 412 82 HOH HOH A . E 5 HOH 80 413 83 HOH HOH A . E 5 HOH 81 414 84 HOH HOH A . E 5 HOH 82 415 85 HOH HOH A . E 5 HOH 83 416 86 HOH HOH A . E 5 HOH 84 417 87 HOH HOH A . E 5 HOH 85 418 88 HOH HOH A . E 5 HOH 86 419 89 HOH HOH A . E 5 HOH 87 420 90 HOH HOH A . E 5 HOH 88 421 91 HOH HOH A . E 5 HOH 89 422 92 HOH HOH A . E 5 HOH 90 423 93 HOH HOH A . E 5 HOH 91 424 94 HOH HOH A . E 5 HOH 92 425 95 HOH HOH A . E 5 HOH 93 426 96 HOH HOH A . E 5 HOH 94 427 97 HOH HOH A . E 5 HOH 95 428 98 HOH HOH A . E 5 HOH 96 429 99 HOH HOH A . E 5 HOH 97 430 100 HOH HOH A . E 5 HOH 98 431 101 HOH HOH A . E 5 HOH 99 432 102 HOH HOH A . E 5 HOH 100 433 103 HOH HOH A . E 5 HOH 101 434 104 HOH HOH A . E 5 HOH 102 435 105 HOH HOH A . E 5 HOH 103 436 106 HOH HOH A . E 5 HOH 104 437 107 HOH HOH A . E 5 HOH 105 438 108 HOH HOH A . E 5 HOH 106 439 109 HOH HOH A . E 5 HOH 107 440 110 HOH HOH A . E 5 HOH 108 441 111 HOH HOH A . E 5 HOH 109 442 112 HOH HOH A . E 5 HOH 110 443 113 HOH HOH A . E 5 HOH 111 444 114 HOH HOH A . E 5 HOH 112 445 115 HOH HOH A . E 5 HOH 113 446 116 HOH HOH A . E 5 HOH 114 447 117 HOH HOH A . E 5 HOH 115 448 118 HOH HOH A . E 5 HOH 116 449 119 HOH HOH A . E 5 HOH 117 450 120 HOH HOH A . E 5 HOH 118 451 121 HOH HOH A . E 5 HOH 119 452 122 HOH HOH A . E 5 HOH 120 453 123 HOH HOH A . E 5 HOH 121 454 124 HOH HOH A . E 5 HOH 122 455 125 HOH HOH A . E 5 HOH 123 456 126 HOH HOH A . E 5 HOH 124 457 127 HOH HOH A . E 5 HOH 125 458 128 HOH HOH A . E 5 HOH 126 459 129 HOH HOH A . E 5 HOH 127 460 130 HOH HOH A . E 5 HOH 128 461 131 HOH HOH A . E 5 HOH 129 462 132 HOH HOH A . E 5 HOH 130 463 133 HOH HOH A . E 5 HOH 131 464 134 HOH HOH A . E 5 HOH 132 465 135 HOH HOH A . E 5 HOH 133 466 136 HOH HOH A . E 5 HOH 134 467 137 HOH HOH A . E 5 HOH 135 468 138 HOH HOH A . E 5 HOH 136 469 139 HOH HOH A . E 5 HOH 137 470 140 HOH HOH A . E 5 HOH 138 471 141 HOH HOH A . E 5 HOH 139 472 142 HOH HOH A . E 5 HOH 140 473 143 HOH HOH A . E 5 HOH 141 474 144 HOH HOH A . E 5 HOH 142 475 145 HOH HOH A . E 5 HOH 143 476 146 HOH HOH A . E 5 HOH 144 477 147 HOH HOH A . E 5 HOH 145 478 148 HOH HOH A . E 5 HOH 146 479 149 HOH HOH A . E 5 HOH 147 480 150 HOH HOH A . E 5 HOH 148 481 151 HOH HOH A . E 5 HOH 149 482 152 HOH HOH A . E 5 HOH 150 483 153 HOH HOH A . E 5 HOH 151 484 154 HOH HOH A . E 5 HOH 152 485 155 HOH HOH A . E 5 HOH 153 486 156 HOH HOH A . E 5 HOH 154 487 157 HOH HOH A . E 5 HOH 155 488 158 HOH HOH A . E 5 HOH 156 489 159 HOH HOH A . E 5 HOH 157 490 160 HOH HOH A . E 5 HOH 158 491 161 HOH HOH A . E 5 HOH 159 492 162 HOH HOH A . E 5 HOH 160 493 163 HOH HOH A . E 5 HOH 161 494 164 HOH HOH A . E 5 HOH 162 495 165 HOH HOH A . E 5 HOH 163 496 166 HOH HOH A . E 5 HOH 164 497 167 HOH HOH A . E 5 HOH 165 498 168 HOH HOH A . E 5 HOH 166 499 169 HOH HOH A . E 5 HOH 167 500 170 HOH HOH A . E 5 HOH 168 501 171 HOH HOH A . E 5 HOH 169 502 172 HOH HOH A . E 5 HOH 170 503 173 HOH HOH A . E 5 HOH 171 504 174 HOH HOH A . E 5 HOH 172 505 175 HOH HOH A . E 5 HOH 173 506 176 HOH HOH A . E 5 HOH 174 507 177 HOH HOH A . E 5 HOH 175 508 178 HOH HOH A . E 5 HOH 176 509 179 HOH HOH A . E 5 HOH 177 510 180 HOH HOH A . E 5 HOH 178 511 181 HOH HOH A . E 5 HOH 179 512 182 HOH HOH A . E 5 HOH 180 513 183 HOH HOH A . E 5 HOH 181 514 184 HOH HOH A . E 5 HOH 182 515 185 HOH HOH A . E 5 HOH 183 516 186 HOH HOH A . E 5 HOH 184 517 187 HOH HOH A . E 5 HOH 185 518 188 HOH HOH A . E 5 HOH 186 519 189 HOH HOH A . E 5 HOH 187 520 190 HOH HOH A . E 5 HOH 188 521 191 HOH HOH A . E 5 HOH 189 522 192 HOH HOH A . E 5 HOH 190 523 193 HOH HOH A . E 5 HOH 191 524 194 HOH HOH A . E 5 HOH 192 525 195 HOH HOH A . E 5 HOH 193 526 196 HOH HOH A . E 5 HOH 194 527 197 HOH HOH A . E 5 HOH 195 528 198 HOH HOH A . E 5 HOH 196 529 199 HOH HOH A . E 5 HOH 197 530 200 HOH HOH A . E 5 HOH 198 531 201 HOH HOH A . E 5 HOH 199 532 202 HOH HOH A . E 5 HOH 200 533 203 HOH HOH A . E 5 HOH 201 534 204 HOH HOH A . E 5 HOH 202 535 205 HOH HOH A . E 5 HOH 203 536 206 HOH HOH A . E 5 HOH 204 537 207 HOH HOH A . E 5 HOH 205 538 208 HOH HOH A . E 5 HOH 206 539 209 HOH HOH A . E 5 HOH 207 540 210 HOH HOH A . E 5 HOH 208 541 211 HOH HOH A . E 5 HOH 209 542 212 HOH HOH A . E 5 HOH 210 543 213 HOH HOH A . E 5 HOH 211 544 214 HOH HOH A . E 5 HOH 212 545 215 HOH HOH A . E 5 HOH 213 546 216 HOH HOH A . E 5 HOH 214 547 217 HOH HOH A . E 5 HOH 215 548 218 HOH HOH A . E 5 HOH 216 549 219 HOH HOH A . E 5 HOH 217 550 220 HOH HOH A . E 5 HOH 218 551 221 HOH HOH A . E 5 HOH 219 552 222 HOH HOH A . E 5 HOH 220 553 223 HOH HOH A . E 5 HOH 221 554 224 HOH HOH A . E 5 HOH 222 555 225 HOH HOH A . E 5 HOH 223 556 226 HOH HOH A . E 5 HOH 224 557 227 HOH HOH A . E 5 HOH 225 558 228 HOH HOH A . E 5 HOH 226 559 229 HOH HOH A . E 5 HOH 227 560 230 HOH HOH A . E 5 HOH 228 561 231 HOH HOH A . E 5 HOH 229 562 232 HOH HOH A . E 5 HOH 230 563 233 HOH HOH A . E 5 HOH 231 564 234 HOH HOH A . E 5 HOH 232 565 235 HOH HOH A . E 5 HOH 233 566 236 HOH HOH A . E 5 HOH 234 567 237 HOH HOH A . E 5 HOH 235 568 238 HOH HOH A . E 5 HOH 236 569 239 HOH HOH A . E 5 HOH 237 570 240 HOH HOH A . E 5 HOH 238 571 241 HOH HOH A . E 5 HOH 239 572 242 HOH HOH A . E 5 HOH 240 573 243 HOH HOH A . E 5 HOH 241 574 244 HOH HOH A . E 5 HOH 242 575 245 HOH HOH A . E 5 HOH 243 576 246 HOH HOH A . E 5 HOH 244 577 247 HOH HOH A . E 5 HOH 245 578 248 HOH HOH A . E 5 HOH 246 579 249 HOH HOH A . E 5 HOH 247 580 250 HOH HOH A . E 5 HOH 248 581 251 HOH HOH A . E 5 HOH 249 582 252 HOH HOH A . E 5 HOH 250 583 253 HOH HOH A . E 5 HOH 251 584 254 HOH HOH A . E 5 HOH 252 585 255 HOH HOH A . E 5 HOH 253 586 256 HOH HOH A . E 5 HOH 254 587 257 HOH HOH A . E 5 HOH 255 588 258 HOH HOH A . E 5 HOH 256 589 259 HOH HOH A . E 5 HOH 257 590 260 HOH HOH A . E 5 HOH 258 591 261 HOH HOH A . E 5 HOH 259 592 262 HOH HOH A . E 5 HOH 260 593 263 HOH HOH A . E 5 HOH 261 594 264 HOH HOH A . E 5 HOH 262 595 265 HOH HOH A . E 5 HOH 263 596 266 HOH HOH A . E 5 HOH 264 597 267 HOH HOH A . E 5 HOH 265 598 268 HOH HOH A . E 5 HOH 266 599 269 HOH HOH A . E 5 HOH 267 600 270 HOH HOH A . E 5 HOH 268 601 271 HOH HOH A . E 5 HOH 269 602 272 HOH HOH A . E 5 HOH 270 603 273 HOH HOH A . E 5 HOH 271 604 274 HOH HOH A . E 5 HOH 272 605 275 HOH HOH A . E 5 HOH 273 606 276 HOH HOH A . E 5 HOH 274 607 277 HOH HOH A . E 5 HOH 275 608 278 HOH HOH A . E 5 HOH 276 609 279 HOH HOH A . E 5 HOH 277 610 280 HOH HOH A . E 5 HOH 278 611 281 HOH HOH A . E 5 HOH 279 612 282 HOH HOH A . E 5 HOH 280 613 283 HOH HOH A . E 5 HOH 281 614 284 HOH HOH A . E 5 HOH 282 615 285 HOH HOH A . E 5 HOH 283 616 286 HOH HOH A . E 5 HOH 284 617 287 HOH HOH A . E 5 HOH 285 618 288 HOH HOH A . E 5 HOH 286 619 289 HOH HOH A . E 5 HOH 287 620 290 HOH HOH A . E 5 HOH 288 621 291 HOH HOH A . E 5 HOH 289 622 292 HOH HOH A . E 5 HOH 290 623 293 HOH HOH A . E 5 HOH 291 624 294 HOH HOH A . E 5 HOH 292 625 295 HOH HOH A . E 5 HOH 293 626 296 HOH HOH A . E 5 HOH 294 627 297 HOH HOH A . E 5 HOH 295 628 298 HOH HOH A . E 5 HOH 296 629 299 HOH HOH A . E 5 HOH 297 630 300 HOH HOH A . E 5 HOH 298 631 301 HOH HOH A . E 5 HOH 299 632 302 HOH HOH A . E 5 HOH 300 633 303 HOH HOH A . E 5 HOH 301 634 304 HOH HOH A . E 5 HOH 302 635 305 HOH HOH A . E 5 HOH 303 636 306 HOH HOH A . E 5 HOH 304 637 307 HOH HOH A . E 5 HOH 305 638 308 HOH HOH A . E 5 HOH 306 639 309 HOH HOH A . E 5 HOH 307 640 310 HOH HOH A . E 5 HOH 308 641 311 HOH HOH A . E 5 HOH 309 642 312 HOH HOH A . E 5 HOH 310 643 313 HOH HOH A . E 5 HOH 311 644 314 HOH HOH A . E 5 HOH 312 645 315 HOH HOH A . E 5 HOH 313 646 316 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 38 A MSE 37 ? MET SELENOMETHIONINE 3 A MSE 137 A MSE 136 ? MET SELENOMETHIONINE 4 A MSE 175 A MSE 174 ? MET SELENOMETHIONINE 5 A MSE 194 A MSE 193 ? MET SELENOMETHIONINE 6 A MSE 202 A MSE 201 ? MET SELENOMETHIONINE 7 A MSE 216 A MSE 215 ? MET SELENOMETHIONINE 8 A MSE 243 A MSE 242 ? MET SELENOMETHIONINE 9 A MSE 253 A MSE 252 ? MET SELENOMETHIONINE 10 A MSE 271 A MSE 270 ? MET SELENOMETHIONINE 11 A MSE 316 A MSE 315 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 22300 ? 1 MORE -188 ? 1 'SSA (A^2)' 67490 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 99.7730000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 49.8865000000 -0.8660254038 -0.5000000000 0.0000000000 86.4059526118 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5000000000 -0.8660254038 0.0000000000 49.8865000000 -0.8660254038 -0.5000000000 0.0000000000 86.4059526118 0.0000000000 0.0000000000 -1.0000000000 68.5895000000 5 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 99.7730000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 68.5895000000 6 'crystal symmetry operation' 12_555 x,x-y,-z+1/2 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 68.5895000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 631 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 82 ? A THR 81 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? A GLY 237 ? A GLY 236 ? 1_555 67.7 ? 2 OG1 ? A THR 82 ? A THR 81 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 434 ? 1_555 82.4 ? 3 O ? A GLY 237 ? A GLY 236 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 434 ? 1_555 78.9 ? 4 OG1 ? A THR 82 ? A THR 81 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 565 ? 1_555 159.7 ? 5 O ? A GLY 237 ? A GLY 236 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 565 ? 1_555 98.1 ? 6 O ? E HOH . ? A HOH 434 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 565 ? 1_555 80.6 ? 7 OG1 ? A THR 82 ? A THR 81 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 92.2 ? 8 O ? A GLY 237 ? A GLY 236 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 157.6 ? 9 O ? E HOH . ? A HOH 434 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 89.1 ? 10 O ? E HOH . ? A HOH 565 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 567 ? 1_555 98.5 ? 11 OG1 ? A THR 82 ? A THR 81 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 568 ? 1_555 108.7 ? 12 O ? A GLY 237 ? A GLY 236 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 568 ? 1_555 94.5 ? 13 O ? E HOH . ? A HOH 434 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 568 ? 1_555 164.0 ? 14 O ? E HOH . ? A HOH 565 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 568 ? 1_555 86.1 ? 15 O ? E HOH . ? A HOH 567 ? 1_555 CA ? C CA . ? A CA 332 ? 1_555 O ? E HOH . ? A HOH 568 ? 1_555 101.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-07-28 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.value' 27 5 'Structure model' '_struct_conn.pdbx_dist_value' 28 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 5 'Structure model' '_struct_ref_seq_dif.details' 40 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 31.6428 _pdbx_refine_tls.origin_y 11.7766 _pdbx_refine_tls.origin_z 18.1997 _pdbx_refine_tls.T[1][1] 0.0272 _pdbx_refine_tls.T[2][2] 0.0194 _pdbx_refine_tls.T[3][3] 0.0177 _pdbx_refine_tls.T[1][2] -0.0010 _pdbx_refine_tls.T[1][3] 0.0036 _pdbx_refine_tls.T[2][3] -0.0181 _pdbx_refine_tls.L[1][1] 0.1511 _pdbx_refine_tls.L[2][2] 0.2766 _pdbx_refine_tls.L[3][3] 0.5690 _pdbx_refine_tls.L[1][2] -0.1290 _pdbx_refine_tls.L[1][3] -0.0362 _pdbx_refine_tls.L[2][3] 0.2195 _pdbx_refine_tls.S[1][1] 0.0011 _pdbx_refine_tls.S[2][2] -0.0487 _pdbx_refine_tls.S[3][3] 0.0476 _pdbx_refine_tls.S[1][2] 0.0131 _pdbx_refine_tls.S[1][3] -0.0178 _pdbx_refine_tls.S[2][3] 0.0426 _pdbx_refine_tls.S[2][1] -0.0394 _pdbx_refine_tls.S[3][1] 0.0179 _pdbx_refine_tls.S[3][2] -0.0621 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 329 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3NA6 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 31 ? ? -164.32 96.82 2 1 ASP A 189 ? ? -102.74 58.69 3 1 MSE A 252 ? ? -39.38 95.91 4 1 LEU A 259 ? ? -111.83 69.85 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 2 ? CD ? A LYS 3 CD 2 1 Y 1 A LYS 2 ? CE ? A LYS 3 CE 3 1 Y 1 A LYS 2 ? NZ ? A LYS 3 NZ 4 1 Y 1 A ILE 188 ? CG1 ? A ILE 189 CG1 5 1 Y 1 A ILE 188 ? CG2 ? A ILE 189 CG2 6 1 Y 1 A ILE 188 ? CD1 ? A ILE 189 CD1 7 1 Y 1 A GLU 191 ? OE1 ? A GLU 192 OE1 8 1 Y 1 A GLU 191 ? OE2 ? A GLU 192 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLY 330 ? A GLY 331 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'CALCIUM ION' CA 4 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 5 water HOH #