data_3NED # _entry.id 3NED # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NED pdb_00003ned 10.2210/pdb3ned/pdb RCSB RCSB059723 ? ? WWPDB D_1000059723 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3NED _pdbx_database_status.recvd_initial_deposition_date 2010-06-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mayo, S.L.' 1 ? 'Chica, R.A.' 2 ? 'Moore, M.M.' 3 ? # _citation.id primary _citation.title 'Generation of longer emission wavelength red fluorescent proteins using computationally designed libraries.' _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_volume 107 _citation.page_first 20257 _citation.page_last 20262 _citation.year 2010 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 1091-6490 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21059931 _citation.pdbx_database_id_DOI 10.1073/pnas.1013910107 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chica, R.A.' 1 ? primary 'Moore, M.M.' 2 ? primary 'Allen, B.D.' 3 ? primary 'Mayo, S.L.' 4 ? # _cell.entry_id 3NED _cell.length_a 48.807 _cell.length_b 42.760 _cell.length_c 61.203 _cell.angle_alpha 90.00 _cell.angle_beta 112.35 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NED _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PAmCherry1 protein' 27753.230 1 ? 'V16T, R125H, Q163L, V195A, I197Y, and A217C' ? ? 2 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 water nat water 18.015 414 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MGHHHHHHGVSKGEEDNMAIIKEFMRFKTHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQF (NRQ)SKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGW EACSERMYPEDGALKGEMKMRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNTNTKLDITSHNEDYTIVEQYERNEGRHST GGMDELYK ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHHHHHHGVSKGEEDNMAIIKEFMRFKTHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQF MYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEA CSERMYPEDGALKGEMKMRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNTNTKLDITSHNEDYTIVEQYERNEGRHSTGG MDELYK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 GLY n 1 10 VAL n 1 11 SER n 1 12 LYS n 1 13 GLY n 1 14 GLU n 1 15 GLU n 1 16 ASP n 1 17 ASN n 1 18 MET n 1 19 ALA n 1 20 ILE n 1 21 ILE n 1 22 LYS n 1 23 GLU n 1 24 PHE n 1 25 MET n 1 26 ARG n 1 27 PHE n 1 28 LYS n 1 29 THR n 1 30 HIS n 1 31 MET n 1 32 GLU n 1 33 GLY n 1 34 SER n 1 35 VAL n 1 36 ASN n 1 37 GLY n 1 38 HIS n 1 39 GLU n 1 40 PHE n 1 41 GLU n 1 42 ILE n 1 43 GLU n 1 44 GLY n 1 45 GLU n 1 46 GLY n 1 47 GLU n 1 48 GLY n 1 49 ARG n 1 50 PRO n 1 51 TYR n 1 52 GLU n 1 53 GLY n 1 54 THR n 1 55 GLN n 1 56 THR n 1 57 ALA n 1 58 LYS n 1 59 LEU n 1 60 LYS n 1 61 VAL n 1 62 THR n 1 63 LYS n 1 64 GLY n 1 65 GLY n 1 66 PRO n 1 67 LEU n 1 68 PRO n 1 69 PHE n 1 70 ALA n 1 71 TRP n 1 72 ASP n 1 73 ILE n 1 74 LEU n 1 75 SER n 1 76 PRO n 1 77 GLN n 1 78 PHE n 1 79 NRQ y 1 79 CH6 y 1 79 EYG y 1 80 SER n 1 81 LYS n 1 82 ALA n 1 83 TYR n 1 84 VAL n 1 85 LYS n 1 86 HIS n 1 87 PRO n 1 88 ALA n 1 89 ASP n 1 90 ILE n 1 91 PRO n 1 92 ASP n 1 93 TYR n 1 94 LEU n 1 95 LYS n 1 96 LEU n 1 97 SER n 1 98 PHE n 1 99 PRO n 1 100 GLU n 1 101 GLY n 1 102 PHE n 1 103 LYS n 1 104 TRP n 1 105 GLU n 1 106 ARG n 1 107 VAL n 1 108 MET n 1 109 ASN n 1 110 PHE n 1 111 GLU n 1 112 ASP n 1 113 GLY n 1 114 GLY n 1 115 VAL n 1 116 VAL n 1 117 THR n 1 118 VAL n 1 119 THR n 1 120 GLN n 1 121 ASP n 1 122 SER n 1 123 SER n 1 124 LEU n 1 125 GLN n 1 126 ASP n 1 127 GLY n 1 128 GLU n 1 129 PHE n 1 130 ILE n 1 131 TYR n 1 132 LYS n 1 133 VAL n 1 134 LYS n 1 135 LEU n 1 136 ARG n 1 137 GLY n 1 138 THR n 1 139 ASN n 1 140 PHE n 1 141 PRO n 1 142 SER n 1 143 ASP n 1 144 GLY n 1 145 PRO n 1 146 VAL n 1 147 MET n 1 148 GLN n 1 149 LYS n 1 150 LYS n 1 151 THR n 1 152 MET n 1 153 GLY n 1 154 TRP n 1 155 GLU n 1 156 ALA n 1 157 CYS n 1 158 SER n 1 159 GLU n 1 160 ARG n 1 161 MET n 1 162 TYR n 1 163 PRO n 1 164 GLU n 1 165 ASP n 1 166 GLY n 1 167 ALA n 1 168 LEU n 1 169 LYS n 1 170 GLY n 1 171 GLU n 1 172 MET n 1 173 LYS n 1 174 MET n 1 175 ARG n 1 176 LEU n 1 177 LYS n 1 178 LEU n 1 179 LYS n 1 180 ASP n 1 181 GLY n 1 182 GLY n 1 183 HIS n 1 184 TYR n 1 185 ASP n 1 186 ALA n 1 187 GLU n 1 188 VAL n 1 189 LYS n 1 190 THR n 1 191 THR n 1 192 TYR n 1 193 LYS n 1 194 ALA n 1 195 LYS n 1 196 LYS n 1 197 PRO n 1 198 VAL n 1 199 GLN n 1 200 LEU n 1 201 PRO n 1 202 GLY n 1 203 ALA n 1 204 TYR n 1 205 ASN n 1 206 THR n 1 207 ASN n 1 208 THR n 1 209 LYS n 1 210 LEU n 1 211 ASP n 1 212 ILE n 1 213 THR n 1 214 SER n 1 215 HIS n 1 216 ASN n 1 217 GLU n 1 218 ASP n 1 219 TYR n 1 220 THR n 1 221 ILE n 1 222 VAL n 1 223 GLU n 1 224 GLN n 1 225 TYR n 1 226 GLU n 1 227 ARG n 1 228 ASN n 1 229 GLU n 1 230 GLY n 1 231 ARG n 1 232 HIS n 1 233 SER n 1 234 THR n 1 235 GLY n 1 236 GLY n 1 237 MET n 1 238 ASP n 1 239 GLU n 1 240 LEU n 1 241 TYR n 1 242 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Sea anemone' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PAmCherry, PAmCherry1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Discosoma sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 86600 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Gold (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D1MPT3_DISSP _struct_ref.pdbx_db_accession D1MPT3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VSKGEEDNMAIIKEFMRFKVHMEGSVNGHVFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFTWDILSPQFMYGSNAYVKHP ADIPDYFKLSFPEGFKWERVMKFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEALSERMYPEDGA LKGEVKPRVKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNRKLDITSHNEDYTIVEQYERAEGRHSTGGMDELYK ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NED _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 242 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession D1MPT3 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 236 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -3 _struct_ref_seq.pdbx_auth_seq_align_end 231 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NED MET A 1 ? UNP D1MPT3 ? ? 'expression tag' -12 1 1 3NED GLY A 2 ? UNP D1MPT3 ? ? 'expression tag' -11 2 1 3NED HIS A 3 ? UNP D1MPT3 ? ? 'expression tag' -10 3 1 3NED HIS A 4 ? UNP D1MPT3 ? ? 'expression tag' -9 4 1 3NED HIS A 5 ? UNP D1MPT3 ? ? 'expression tag' -8 5 1 3NED HIS A 6 ? UNP D1MPT3 ? ? 'expression tag' -7 6 1 3NED HIS A 7 ? UNP D1MPT3 ? ? 'expression tag' -6 7 1 3NED HIS A 8 ? UNP D1MPT3 ? ? 'expression tag' -5 8 1 3NED GLY A 9 ? UNP D1MPT3 ? ? 'expression tag' -4 9 1 3NED THR A 29 ? UNP D1MPT3 VAL 21 'engineered mutation' 16 10 1 3NED GLU A 39 ? UNP D1MPT3 VAL 31 'engineered mutation' 26 11 1 3NED ALA A 70 ? UNP D1MPT3 THR 62 'engineered mutation' 57 12 1 3NED NRQ A 79 ? UNP D1MPT3 MET 71 chromophore 67 13 1 3NED NRQ A 79 ? UNP D1MPT3 TYR 72 chromophore 67 14 1 3NED NRQ A 79 ? UNP D1MPT3 GLY 73 chromophore 67 15 1 3NED LYS A 81 ? UNP D1MPT3 ASN 75 'engineered mutation' 70 16 1 3NED LEU A 94 ? UNP D1MPT3 PHE 88 'engineered mutation' 83 17 1 3NED ASN A 109 ? UNP D1MPT3 LYS 103 'engineered mutation' 98 18 1 3NED CYS A 157 ? UNP D1MPT3 LEU 151 'engineered mutation' 146 19 1 3NED MET A 172 ? UNP D1MPT3 VAL 166 'engineered mutation' 161 20 1 3NED MET A 174 ? UNP D1MPT3 PRO 168 'engineered mutation' 163 21 1 3NED LEU A 176 ? UNP D1MPT3 VAL 170 'engineered mutation' 165 22 1 3NED THR A 206 ? UNP D1MPT3 VAL 200 'engineered mutation' 195 23 1 3NED THR A 208 ? UNP D1MPT3 ARG 202 'engineered mutation' 197 24 1 3NED ASN A 228 ? UNP D1MPT3 ALA 222 'engineered mutation' 217 25 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CH6 'L-peptide linking' n '{(4Z)-2-[(1S)-1-amino-3-(methylsulfanyl)propyl]-4-[(4-hydroxyphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid' 'CHROMOPHORE (MET-TYR-GLY)' 'C16 H19 N3 O4 S' 349.405 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EYG 'L-peptide linking' n '{(2R,4Z)-2-[(1R)-1-amino-3-(methylsulfanyl)propyl]-2-hydroxy-4-[(4-hydroxyphenyl)methylidene]-5-oxoimidazolidin-1-yl}acetic acid' 'CHROMOPHORE (MET-TYR-GLY)' 'C16 H21 N3 O5 S' 367.420 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NRQ 'L-peptide linking' n '{(4Z)-4-(4-hydroxybenzylidene)-2-[3-(methylthio)propanimidoyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid' 'CHROMOPHORE (MET-TYR-GLY)' 'C16 H17 N3 O4 S' 347.389 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3NED _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;200 mM ammonium acetate, 100 mM Bis-Tris, pH 6.5, and 25% (w/v) polyethylene glycol 3350, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2008-11-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator synchrotron _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3NED _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 56.7 _reflns.d_resolution_high 0.95 _reflns.number_obs 135356 _reflns.number_all ? _reflns.percent_possible_obs 91.9 _reflns.pdbx_Rmerge_I_obs 0.121 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3NED _refine.ls_number_reflns_obs 135356 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 56.60 _refine.ls_d_res_high 0.95 _refine.ls_percent_reflns_obs 91.9 _refine.ls_R_factor_obs 0.13460 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.13343 _refine.ls_R_factor_R_free 0.15691 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 6732 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.972 _refine.B_iso_mean 9.434 _refine.aniso_B[1][1] 0.02 _refine.aniso_B[2][2] -0.08 _refine.aniso_B[3][3] 0.08 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.02 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.022 _refine.overall_SU_ML 0.017 _refine.overall_SU_B 0.675 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.021 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1892 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 414 _refine_hist.number_atoms_total 2313 _refine_hist.d_res_high 0.95 _refine_hist.d_res_low 56.60 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.026 0.022 ? 2217 'X-RAY DIFFRACTION' ? r_bond_other_d 0.004 0.020 ? 2089 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.431 1.988 ? 3044 'X-RAY DIFFRACTION' ? r_angle_other_deg 3.500 2.998 ? 4846 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.332 5.000 ? 296 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.837 24.804 ? 102 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.591 15.000 ? 409 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.624 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.147 0.200 ? 311 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.013 0.021 ? 2608 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.005 0.020 ? 496 'X-RAY DIFFRACTION' ? r_mcbond_it 1.706 1.500 ? 1311 'X-RAY DIFFRACTION' ? r_mcbond_other 1.045 1.500 ? 525 'X-RAY DIFFRACTION' ? r_mcangle_it 2.496 2.000 ? 2147 'X-RAY DIFFRACTION' ? r_scbond_it 3.588 3.000 ? 906 'X-RAY DIFFRACTION' ? r_scangle_it 4.979 4.500 ? 872 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.861 3.000 ? 4306 'X-RAY DIFFRACTION' ? r_sphericity_free 12.295 3.000 ? 473 'X-RAY DIFFRACTION' ? r_sphericity_bonded 6.829 3.000 ? 4204 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 0.950 _refine_ls_shell.d_res_low 0.975 _refine_ls_shell.number_reflns_R_work 5696 _refine_ls_shell.R_factor_R_work 0.373 _refine_ls_shell.percent_reflns_obs 55.31 _refine_ls_shell.R_factor_R_free 0.380 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 290 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3NED _struct.title mRouge _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NED _struct_keywords.pdbx_keywords 'FLUORESCENT PROTEIN' _struct_keywords.text 'RFP, mCherry, beta barrel, FLUORESCENT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 2 ? E N N 2 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 14 ? ILE A 21 ? GLU A 1 ILE A 8 1 ? 8 HELX_P HELX_P2 2 ALA A 70 ? PHE A 78 ? ALA A 57 PHE A 65 5 ? 9 HELX_P HELX_P3 3 SER A 80 ? VAL A 84 ? SER A 69 VAL A 73 5 ? 5 HELX_P HELX_P4 4 ASP A 92 ? SER A 97 ? ASP A 81 SER A 86 1 ? 6 HELX_P HELX_P5 5 GLY A 235 ? GLU A 239 ? GLY A 224 GLU A 228 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PHE 78 C A ? ? 1_555 A NRQ 79 N1 A ? A PHE 65 A NRQ 67 1_555 ? ? ? ? ? ? ? 1.298 ? ? covale2 covale both ? A PHE 78 C B ? ? 1_555 A CH6 79 N1 B ? A PHE 65 A CH6 67 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale3 covale both ? A PHE 78 C C ? ? 1_555 A EYG 79 N1 C ? A PHE 65 A EYG 67 1_555 ? ? ? ? ? ? ? 1.280 ? ? covale4 covale both ? A NRQ 79 C3 A ? ? 1_555 A SER 80 N ? ? A NRQ 67 A SER 69 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale5 covale both ? A CH6 79 C3 B ? ? 1_555 A SER 80 N ? ? A CH6 67 A SER 69 1_555 ? ? ? ? ? ? ? 1.336 ? ? metalc1 metalc ? ? A GLU 23 O ? ? ? 1_555 D NA . NA ? ? A GLU 10 A NA 234 1_555 ? ? ? ? ? ? ? 2.764 ? ? metalc2 metalc ? ? A THR 54 OG1 ? ? ? 1_555 E NA . NA ? ? A THR 41 A NA 235 1_555 ? ? ? ? ? ? ? 3.066 ? ? metalc3 metalc ? ? B NA . NA ? ? ? 1_555 F HOH . O ? ? A NA 232 A HOH 244 1_555 ? ? ? ? ? ? ? 3.192 ? ? metalc4 metalc ? ? B NA . NA ? ? ? 1_555 F HOH . O ? ? A NA 232 A HOH 600 1_555 ? ? ? ? ? ? ? 2.642 ? ? metalc5 metalc ? ? D NA . NA ? ? ? 1_555 F HOH . O ? ? A NA 234 A HOH 489 1_555 ? ? ? ? ? ? ? 2.753 ? ? metalc6 metalc ? ? E NA . NA ? ? ? 1_555 F HOH . O ? ? A NA 235 A HOH 631 1_555 ? ? ? ? ? ? ? 3.028 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 65 A . ? GLY 52 A PRO 66 A ? PRO 53 A 1 -10.51 2 PHE 98 A . ? PHE 87 A PRO 99 A ? PRO 88 A 1 12.41 3 PHE 98 A . ? PHE 87 A PRO 99 A ? PRO 88 A 1 18.75 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 13 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel A 12 13 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 151 ? TRP A 154 ? THR A 140 TRP A 143 A 2 ALA A 167 ? LEU A 178 ? ALA A 156 LEU A 167 A 3 HIS A 183 ? ALA A 194 ? HIS A 172 ALA A 183 A 4 PHE A 102 ? PHE A 110 ? PHE A 91 PHE A 99 A 5 VAL A 115 ? GLN A 125 ? VAL A 104 GLN A 114 A 6 GLU A 128 ? THR A 138 ? GLU A 117 THR A 127 A 7 MET A 25 ? VAL A 35 ? MET A 12 VAL A 22 A 8 HIS A 38 ? ARG A 49 ? HIS A 25 ARG A 36 A 9 THR A 54 ? LYS A 63 ? THR A 41 LYS A 50 A 10 ILE A 221 ? HIS A 232 ? ILE A 210 HIS A 221 A 11 TYR A 204 ? HIS A 215 ? TYR A 193 HIS A 204 A 12 CYS A 157 ? GLU A 164 ? CYS A 146 GLU A 153 A 13 ALA A 167 ? LEU A 178 ? ALA A 156 LEU A 167 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 153 ? N GLY A 142 O LYS A 177 ? O LYS A 166 A 2 3 N LEU A 168 ? N LEU A 157 O TYR A 192 ? O TYR A 181 A 3 4 O LYS A 193 ? O LYS A 182 N LYS A 103 ? N LYS A 92 A 4 5 N PHE A 102 ? N PHE A 91 O SER A 122 ? O SER A 111 A 5 6 N THR A 119 ? N THR A 108 O LYS A 134 ? O LYS A 123 A 6 7 O VAL A 133 ? O VAL A 122 N HIS A 30 ? N HIS A 17 A 7 8 N MET A 31 ? N MET A 18 O ILE A 42 ? O ILE A 29 A 8 9 N GLU A 45 ? N GLU A 32 O LYS A 58 ? O LYS A 45 A 9 10 N LEU A 59 ? N LEU A 46 O VAL A 222 ? O VAL A 211 A 10 11 O TYR A 225 ? O TYR A 214 N ASP A 211 ? N ASP A 200 A 11 12 O TYR A 204 ? O TYR A 193 N MET A 161 ? N MET A 150 A 12 13 N TYR A 162 ? N TYR A 151 O LYS A 169 ? O LYS A 158 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 232 ? 3 'BINDING SITE FOR RESIDUE NA A 232' AC2 Software A ACT 233 ? 6 'BINDING SITE FOR RESIDUE ACT A 233' AC3 Software A NA 234 ? 6 'BINDING SITE FOR RESIDUE NA A 234' AC4 Software A NA 235 ? 5 'BINDING SITE FOR RESIDUE NA A 235' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 THR A 138 ? THR A 127 . ? 1_555 ? 2 AC1 3 ASN A 139 ? ASN A 128 . ? 1_555 ? 3 AC1 3 HOH F . ? HOH A 600 . ? 1_555 ? 4 AC2 6 GLY A 202 ? GLY A 191 . ? 1_555 ? 5 AC2 6 ALA A 203 ? ALA A 192 . ? 1_555 ? 6 AC2 6 HOH F . ? HOH A 533 . ? 1_555 ? 7 AC2 6 HOH F . ? HOH A 599 . ? 1_555 ? 8 AC2 6 HOH F . ? HOH A 602 . ? 1_555 ? 9 AC2 6 HOH F . ? HOH A 613 . ? 1_555 ? 10 AC3 6 GLU A 23 ? GLU A 10 . ? 1_555 ? 11 AC3 6 ARG A 49 ? ARG A 36 . ? 1_555 ? 12 AC3 6 PRO A 50 ? PRO A 37 . ? 1_555 ? 13 AC3 6 TYR A 51 ? TYR A 38 . ? 1_555 ? 14 AC3 6 GLU A 52 ? GLU A 39 . ? 1_555 ? 15 AC3 6 HOH F . ? HOH A 489 . ? 1_555 ? 16 AC4 5 GLY A 48 ? GLY A 35 . ? 1_555 ? 17 AC4 5 ARG A 49 ? ARG A 36 . ? 1_555 ? 18 AC4 5 THR A 54 ? THR A 41 . ? 1_555 ? 19 AC4 5 GLN A 55 ? GLN A 42 . ? 1_555 ? 20 AC4 5 HOH F . ? HOH A 631 . ? 1_555 ? # _database_PDB_matrix.entry_id 3NED _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3NED _atom_sites.fract_transf_matrix[1][1] 0.020489 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008424 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023386 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017666 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -12 ? ? ? A . n A 1 2 GLY 2 -11 ? ? ? A . n A 1 3 HIS 3 -10 ? ? ? A . n A 1 4 HIS 4 -9 ? ? ? A . n A 1 5 HIS 5 -8 ? ? ? A . n A 1 6 HIS 6 -7 ? ? ? A . n A 1 7 HIS 7 -6 ? ? ? A . n A 1 8 HIS 8 -5 ? ? ? A . n A 1 9 GLY 9 -4 ? ? ? A . n A 1 10 VAL 10 -3 ? ? ? A . n A 1 11 SER 11 -2 ? ? ? A . n A 1 12 LYS 12 -1 ? ? ? A . n A 1 13 GLY 13 0 ? ? ? A . n A 1 14 GLU 14 1 1 GLU GLU A . n A 1 15 GLU 15 2 2 GLU GLU A . n A 1 16 ASP 16 3 3 ASP ASP A . n A 1 17 ASN 17 4 4 ASN ASN A . n A 1 18 MET 18 5 5 MET MET A . n A 1 19 ALA 19 6 6 ALA ALA A . n A 1 20 ILE 20 7 7 ILE ILE A . n A 1 21 ILE 21 8 8 ILE ILE A . n A 1 22 LYS 22 9 9 LYS LYS A . n A 1 23 GLU 23 10 10 GLU GLU A . n A 1 24 PHE 24 11 11 PHE PHE A . n A 1 25 MET 25 12 12 MET MET A . n A 1 26 ARG 26 13 13 ARG ARG A . n A 1 27 PHE 27 14 14 PHE PHE A . n A 1 28 LYS 28 15 15 LYS LYS A . n A 1 29 THR 29 16 16 THR THR A . n A 1 30 HIS 30 17 17 HIS HIS A . n A 1 31 MET 31 18 18 MET MET A . n A 1 32 GLU 32 19 19 GLU GLU A . n A 1 33 GLY 33 20 20 GLY GLY A . n A 1 34 SER 34 21 21 SER SER A . n A 1 35 VAL 35 22 22 VAL VAL A . n A 1 36 ASN 36 23 23 ASN ASN A . n A 1 37 GLY 37 24 24 GLY GLY A . n A 1 38 HIS 38 25 25 HIS HIS A . n A 1 39 GLU 39 26 26 GLU GLU A . n A 1 40 PHE 40 27 27 PHE PHE A . n A 1 41 GLU 41 28 28 GLU GLU A . n A 1 42 ILE 42 29 29 ILE ILE A . n A 1 43 GLU 43 30 30 GLU GLU A . n A 1 44 GLY 44 31 31 GLY GLY A . n A 1 45 GLU 45 32 32 GLU GLU A . n A 1 46 GLY 46 33 33 GLY GLY A . n A 1 47 GLU 47 34 34 GLU GLU A . n A 1 48 GLY 48 35 35 GLY GLY A . n A 1 49 ARG 49 36 36 ARG ARG A . n A 1 50 PRO 50 37 37 PRO PRO A . n A 1 51 TYR 51 38 38 TYR TYR A . n A 1 52 GLU 52 39 39 GLU GLU A . n A 1 53 GLY 53 40 40 GLY GLY A . n A 1 54 THR 54 41 41 THR THR A . n A 1 55 GLN 55 42 42 GLN GLN A . n A 1 56 THR 56 43 43 THR THR A . n A 1 57 ALA 57 44 44 ALA ALA A . n A 1 58 LYS 58 45 45 LYS LYS A . n A 1 59 LEU 59 46 46 LEU LEU A . n A 1 60 LYS 60 47 47 LYS LYS A . n A 1 61 VAL 61 48 48 VAL VAL A . n A 1 62 THR 62 49 49 THR THR A . n A 1 63 LYS 63 50 50 LYS LYS A . n A 1 64 GLY 64 51 51 GLY GLY A . n A 1 65 GLY 65 52 52 GLY GLY A . n A 1 66 PRO 66 53 53 PRO PRO A . n A 1 67 LEU 67 54 54 LEU LEU A . n A 1 68 PRO 68 55 55 PRO PRO A . n A 1 69 PHE 69 56 56 PHE PHE A . n A 1 70 ALA 70 57 57 ALA ALA A . n A 1 71 TRP 71 58 58 TRP TRP A . n A 1 72 ASP 72 59 59 ASP ASP A . n A 1 73 ILE 73 60 60 ILE ILE A . n A 1 74 LEU 74 61 61 LEU LEU A . n A 1 75 SER 75 62 62 SER SER A . n A 1 76 PRO 76 63 63 PRO PRO A . n A 1 77 GLN 77 64 64 GLN GLN A . n A 1 78 PHE 78 65 65 PHE PHE A . n A 1 79 NRQ 79 67 67 NRQ NRQ A . y A 1 79 CH6 79 67 67 CH6 CH6 A . y A 1 79 EYG 79 67 67 EYG EYG A . y A 1 80 SER 80 69 69 SER SER A . n A 1 81 LYS 81 70 70 LYS LYS A . n A 1 82 ALA 82 71 71 ALA ALA A . n A 1 83 TYR 83 72 72 TYR TYR A . n A 1 84 VAL 84 73 73 VAL VAL A . n A 1 85 LYS 85 74 74 LYS LYS A . n A 1 86 HIS 86 75 75 HIS HIS A . n A 1 87 PRO 87 76 76 PRO PRO A . n A 1 88 ALA 88 77 77 ALA ALA A . n A 1 89 ASP 89 78 78 ASP ASP A . n A 1 90 ILE 90 79 79 ILE ILE A . n A 1 91 PRO 91 80 80 PRO PRO A . n A 1 92 ASP 92 81 81 ASP ASP A . n A 1 93 TYR 93 82 82 TYR TYR A . n A 1 94 LEU 94 83 83 LEU LEU A . n A 1 95 LYS 95 84 84 LYS LYS A . n A 1 96 LEU 96 85 85 LEU LEU A . n A 1 97 SER 97 86 86 SER SER A . n A 1 98 PHE 98 87 87 PHE PHE A . n A 1 99 PRO 99 88 88 PRO PRO A . n A 1 100 GLU 100 89 89 GLU GLU A . n A 1 101 GLY 101 90 90 GLY GLY A . n A 1 102 PHE 102 91 91 PHE PHE A . n A 1 103 LYS 103 92 92 LYS LYS A . n A 1 104 TRP 104 93 93 TRP TRP A . n A 1 105 GLU 105 94 94 GLU GLU A . n A 1 106 ARG 106 95 95 ARG ARG A . n A 1 107 VAL 107 96 96 VAL VAL A . n A 1 108 MET 108 97 97 MET MET A . n A 1 109 ASN 109 98 98 ASN ASN A . n A 1 110 PHE 110 99 99 PHE PHE A . n A 1 111 GLU 111 100 100 GLU GLU A . n A 1 112 ASP 112 101 101 ASP ASP A . n A 1 113 GLY 113 102 102 GLY GLY A . n A 1 114 GLY 114 103 103 GLY GLY A . n A 1 115 VAL 115 104 104 VAL VAL A . n A 1 116 VAL 116 105 105 VAL VAL A . n A 1 117 THR 117 106 106 THR THR A . n A 1 118 VAL 118 107 107 VAL VAL A . n A 1 119 THR 119 108 108 THR THR A . n A 1 120 GLN 120 109 109 GLN GLN A . n A 1 121 ASP 121 110 110 ASP ASP A . n A 1 122 SER 122 111 111 SER SER A . n A 1 123 SER 123 112 112 SER SER A . n A 1 124 LEU 124 113 113 LEU LEU A . n A 1 125 GLN 125 114 114 GLN GLN A . n A 1 126 ASP 126 115 115 ASP ASP A . n A 1 127 GLY 127 116 116 GLY GLY A . n A 1 128 GLU 128 117 117 GLU GLU A . n A 1 129 PHE 129 118 118 PHE PHE A . n A 1 130 ILE 130 119 119 ILE ILE A . n A 1 131 TYR 131 120 120 TYR TYR A . n A 1 132 LYS 132 121 121 LYS LYS A . n A 1 133 VAL 133 122 122 VAL VAL A . n A 1 134 LYS 134 123 123 LYS LYS A . n A 1 135 LEU 135 124 124 LEU LEU A . n A 1 136 ARG 136 125 125 ARG ARG A . n A 1 137 GLY 137 126 126 GLY GLY A . n A 1 138 THR 138 127 127 THR THR A . n A 1 139 ASN 139 128 128 ASN ASN A . n A 1 140 PHE 140 129 129 PHE PHE A . n A 1 141 PRO 141 130 130 PRO PRO A . n A 1 142 SER 142 131 131 SER SER A . n A 1 143 ASP 143 132 132 ASP ASP A . n A 1 144 GLY 144 133 133 GLY GLY A . n A 1 145 PRO 145 134 134 PRO PRO A . n A 1 146 VAL 146 135 135 VAL VAL A . n A 1 147 MET 147 136 136 MET MET A . n A 1 148 GLN 148 137 137 GLN GLN A . n A 1 149 LYS 149 138 138 LYS LYS A . n A 1 150 LYS 150 139 139 LYS LYS A . n A 1 151 THR 151 140 140 THR THR A . n A 1 152 MET 152 141 141 MET MET A . n A 1 153 GLY 153 142 142 GLY GLY A . n A 1 154 TRP 154 143 143 TRP TRP A . n A 1 155 GLU 155 144 144 GLU GLU A . n A 1 156 ALA 156 145 145 ALA ALA A . n A 1 157 CYS 157 146 146 CYS CYS A . n A 1 158 SER 158 147 147 SER SER A . n A 1 159 GLU 159 148 148 GLU GLU A . n A 1 160 ARG 160 149 149 ARG ARG A . n A 1 161 MET 161 150 150 MET MET A . n A 1 162 TYR 162 151 151 TYR TYR A . n A 1 163 PRO 163 152 152 PRO PRO A . n A 1 164 GLU 164 153 153 GLU GLU A . n A 1 165 ASP 165 154 154 ASP ASP A . n A 1 166 GLY 166 155 155 GLY GLY A . n A 1 167 ALA 167 156 156 ALA ALA A . n A 1 168 LEU 168 157 157 LEU LEU A . n A 1 169 LYS 169 158 158 LYS LYS A . n A 1 170 GLY 170 159 159 GLY GLY A . n A 1 171 GLU 171 160 160 GLU GLU A . n A 1 172 MET 172 161 161 MET MET A . n A 1 173 LYS 173 162 162 LYS LYS A . n A 1 174 MET 174 163 163 MET MET A . n A 1 175 ARG 175 164 164 ARG ARG A . n A 1 176 LEU 176 165 165 LEU LEU A . n A 1 177 LYS 177 166 166 LYS LYS A . n A 1 178 LEU 178 167 167 LEU LEU A . n A 1 179 LYS 179 168 168 LYS LYS A . n A 1 180 ASP 180 169 169 ASP ASP A . n A 1 181 GLY 181 170 170 GLY GLY A . n A 1 182 GLY 182 171 171 GLY GLY A . n A 1 183 HIS 183 172 172 HIS HIS A . n A 1 184 TYR 184 173 173 TYR TYR A . n A 1 185 ASP 185 174 174 ASP ASP A . n A 1 186 ALA 186 175 175 ALA ALA A . n A 1 187 GLU 187 176 176 GLU GLU A . n A 1 188 VAL 188 177 177 VAL VAL A . n A 1 189 LYS 189 178 178 LYS LYS A . n A 1 190 THR 190 179 179 THR THR A . n A 1 191 THR 191 180 180 THR THR A . n A 1 192 TYR 192 181 181 TYR TYR A . n A 1 193 LYS 193 182 182 LYS LYS A . n A 1 194 ALA 194 183 183 ALA ALA A . n A 1 195 LYS 195 184 184 LYS LYS A . n A 1 196 LYS 196 185 185 LYS LYS A . n A 1 197 PRO 197 186 186 PRO PRO A . n A 1 198 VAL 198 187 187 VAL VAL A . n A 1 199 GLN 199 188 188 GLN GLN A . n A 1 200 LEU 200 189 189 LEU LEU A . n A 1 201 PRO 201 190 190 PRO PRO A . n A 1 202 GLY 202 191 191 GLY GLY A . n A 1 203 ALA 203 192 192 ALA ALA A . n A 1 204 TYR 204 193 193 TYR TYR A . n A 1 205 ASN 205 194 194 ASN ASN A . n A 1 206 THR 206 195 195 THR THR A . n A 1 207 ASN 207 196 196 ASN ASN A . n A 1 208 THR 208 197 197 THR THR A . n A 1 209 LYS 209 198 198 LYS LYS A . n A 1 210 LEU 210 199 199 LEU LEU A . n A 1 211 ASP 211 200 200 ASP ASP A . n A 1 212 ILE 212 201 201 ILE ILE A . n A 1 213 THR 213 202 202 THR THR A . n A 1 214 SER 214 203 203 SER SER A . n A 1 215 HIS 215 204 204 HIS HIS A . n A 1 216 ASN 216 205 205 ASN ASN A . n A 1 217 GLU 217 206 206 GLU GLU A . n A 1 218 ASP 218 207 207 ASP ASP A . n A 1 219 TYR 219 208 208 TYR TYR A . n A 1 220 THR 220 209 209 THR THR A . n A 1 221 ILE 221 210 210 ILE ILE A . n A 1 222 VAL 222 211 211 VAL VAL A . n A 1 223 GLU 223 212 212 GLU GLU A . n A 1 224 GLN 224 213 213 GLN GLN A . n A 1 225 TYR 225 214 214 TYR TYR A . n A 1 226 GLU 226 215 215 GLU GLU A . n A 1 227 ARG 227 216 216 ARG ARG A . n A 1 228 ASN 228 217 217 ASN ASN A . n A 1 229 GLU 229 218 218 GLU GLU A . n A 1 230 GLY 230 219 219 GLY GLY A . n A 1 231 ARG 231 220 220 ARG ARG A . n A 1 232 HIS 232 221 221 HIS HIS A . n A 1 233 SER 233 222 222 SER SER A . n A 1 234 THR 234 223 223 THR THR A . n A 1 235 GLY 235 224 224 GLY GLY A . n A 1 236 GLY 236 225 225 GLY GLY A . n A 1 237 MET 237 226 226 MET MET A . n A 1 238 ASP 238 227 227 ASP ASP A . n A 1 239 GLU 239 228 228 GLU GLU A . n A 1 240 LEU 240 229 229 LEU LEU A . n A 1 241 TYR 241 230 230 TYR TYR A . n A 1 242 LYS 242 231 231 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 232 232 NA NA A . C 3 ACT 1 233 233 ACT ACT A . D 2 NA 1 234 234 NA NA A . E 2 NA 1 235 235 NA NA A . F 4 HOH 1 66 66 HOH HOH A . F 4 HOH 2 68 68 HOH HOH A . F 4 HOH 3 236 236 HOH HOH A . F 4 HOH 4 237 237 HOH HOH A . F 4 HOH 5 238 238 HOH HOH A . F 4 HOH 6 239 239 HOH HOH A . F 4 HOH 7 240 240 HOH HOH A . F 4 HOH 8 241 241 HOH HOH A . F 4 HOH 9 242 242 HOH HOH A . F 4 HOH 10 243 243 HOH HOH A . F 4 HOH 11 244 244 HOH HOH A . F 4 HOH 12 245 245 HOH HOH A . F 4 HOH 13 246 246 HOH HOH A . F 4 HOH 14 247 247 HOH HOH A . F 4 HOH 15 248 248 HOH HOH A . F 4 HOH 16 249 249 HOH HOH A . F 4 HOH 17 250 250 HOH HOH A . F 4 HOH 18 251 251 HOH HOH A . F 4 HOH 19 252 252 HOH HOH A . F 4 HOH 20 253 253 HOH HOH A . F 4 HOH 21 254 254 HOH HOH A . F 4 HOH 22 255 255 HOH HOH A . F 4 HOH 23 256 256 HOH HOH A . F 4 HOH 24 257 257 HOH HOH A . F 4 HOH 25 258 258 HOH HOH A . F 4 HOH 26 259 259 HOH HOH A . F 4 HOH 27 260 260 HOH HOH A . F 4 HOH 28 261 261 HOH HOH A . F 4 HOH 29 262 262 HOH HOH A . F 4 HOH 30 263 263 HOH HOH A . F 4 HOH 31 264 264 HOH HOH A . F 4 HOH 32 265 265 HOH HOH A . F 4 HOH 33 266 266 HOH HOH A . F 4 HOH 34 267 267 HOH HOH A . F 4 HOH 35 268 268 HOH HOH A . F 4 HOH 36 269 269 HOH HOH A . F 4 HOH 37 270 270 HOH HOH A . F 4 HOH 38 271 271 HOH HOH A . F 4 HOH 39 272 272 HOH HOH A . F 4 HOH 40 273 273 HOH HOH A . F 4 HOH 41 274 274 HOH HOH A . F 4 HOH 42 275 275 HOH HOH A . F 4 HOH 43 276 276 HOH HOH A . F 4 HOH 44 277 277 HOH HOH A . F 4 HOH 45 278 278 HOH HOH A . F 4 HOH 46 279 279 HOH HOH A . F 4 HOH 47 280 280 HOH HOH A . F 4 HOH 48 281 281 HOH HOH A . F 4 HOH 49 282 282 HOH HOH A . F 4 HOH 50 283 283 HOH HOH A . F 4 HOH 51 284 284 HOH HOH A . F 4 HOH 52 285 285 HOH HOH A . F 4 HOH 53 286 286 HOH HOH A . F 4 HOH 54 287 287 HOH HOH A . F 4 HOH 55 288 288 HOH HOH A . F 4 HOH 56 289 289 HOH HOH A . F 4 HOH 57 290 290 HOH HOH A . F 4 HOH 58 291 291 HOH HOH A . F 4 HOH 59 292 292 HOH HOH A . F 4 HOH 60 293 293 HOH HOH A . F 4 HOH 61 294 294 HOH HOH A . F 4 HOH 62 295 295 HOH HOH A . F 4 HOH 63 296 296 HOH HOH A . F 4 HOH 64 297 297 HOH HOH A . F 4 HOH 65 298 298 HOH HOH A . F 4 HOH 66 299 299 HOH HOH A . F 4 HOH 67 300 300 HOH HOH A . F 4 HOH 68 301 301 HOH HOH A . F 4 HOH 69 302 302 HOH HOH A . F 4 HOH 70 303 303 HOH HOH A . F 4 HOH 71 304 304 HOH HOH A . F 4 HOH 72 305 305 HOH HOH A . F 4 HOH 73 306 306 HOH HOH A . F 4 HOH 74 307 307 HOH HOH A . F 4 HOH 75 308 308 HOH HOH A . F 4 HOH 76 309 309 HOH HOH A . F 4 HOH 77 310 310 HOH HOH A . F 4 HOH 78 311 311 HOH HOH A . F 4 HOH 79 312 312 HOH HOH A . F 4 HOH 80 313 313 HOH HOH A . F 4 HOH 81 314 314 HOH HOH A . F 4 HOH 82 315 315 HOH HOH A . F 4 HOH 83 316 316 HOH HOH A . F 4 HOH 84 317 317 HOH HOH A . F 4 HOH 85 318 318 HOH HOH A . F 4 HOH 86 319 319 HOH HOH A . F 4 HOH 87 320 320 HOH HOH A . F 4 HOH 88 321 321 HOH HOH A . F 4 HOH 89 322 322 HOH HOH A . F 4 HOH 90 323 323 HOH HOH A . F 4 HOH 91 324 324 HOH HOH A . F 4 HOH 92 325 325 HOH HOH A . F 4 HOH 93 326 326 HOH HOH A . F 4 HOH 94 327 327 HOH HOH A . F 4 HOH 95 328 328 HOH HOH A . F 4 HOH 96 329 329 HOH HOH A . F 4 HOH 97 330 330 HOH HOH A . F 4 HOH 98 331 331 HOH HOH A . F 4 HOH 99 332 332 HOH HOH A . F 4 HOH 100 333 333 HOH HOH A . F 4 HOH 101 334 334 HOH HOH A . F 4 HOH 102 335 335 HOH HOH A . F 4 HOH 103 336 336 HOH HOH A . F 4 HOH 104 337 337 HOH HOH A . F 4 HOH 105 338 338 HOH HOH A . F 4 HOH 106 339 339 HOH HOH A . F 4 HOH 107 340 340 HOH HOH A . F 4 HOH 108 341 341 HOH HOH A . F 4 HOH 109 342 342 HOH HOH A . F 4 HOH 110 343 343 HOH HOH A . F 4 HOH 111 344 344 HOH HOH A . F 4 HOH 112 345 345 HOH HOH A . F 4 HOH 113 346 346 HOH HOH A . F 4 HOH 114 347 347 HOH HOH A . F 4 HOH 115 348 348 HOH HOH A . F 4 HOH 116 349 349 HOH HOH A . F 4 HOH 117 350 350 HOH HOH A . F 4 HOH 118 351 351 HOH HOH A . F 4 HOH 119 352 352 HOH HOH A . F 4 HOH 120 353 353 HOH HOH A . F 4 HOH 121 354 354 HOH HOH A . F 4 HOH 122 355 355 HOH HOH A . F 4 HOH 123 356 356 HOH HOH A . F 4 HOH 124 357 357 HOH HOH A . F 4 HOH 125 358 358 HOH HOH A . F 4 HOH 126 359 359 HOH HOH A . F 4 HOH 127 360 360 HOH HOH A . F 4 HOH 128 361 361 HOH HOH A . F 4 HOH 129 362 362 HOH HOH A . F 4 HOH 130 363 363 HOH HOH A . F 4 HOH 131 364 364 HOH HOH A . F 4 HOH 132 365 365 HOH HOH A . F 4 HOH 133 366 366 HOH HOH A . F 4 HOH 134 367 367 HOH HOH A . F 4 HOH 135 368 368 HOH HOH A . F 4 HOH 136 369 369 HOH HOH A . F 4 HOH 137 370 370 HOH HOH A . F 4 HOH 138 371 371 HOH HOH A . F 4 HOH 139 372 372 HOH HOH A . F 4 HOH 140 373 373 HOH HOH A . F 4 HOH 141 374 374 HOH HOH A . F 4 HOH 142 375 375 HOH HOH A . F 4 HOH 143 376 376 HOH HOH A . F 4 HOH 144 377 377 HOH HOH A . F 4 HOH 145 378 378 HOH HOH A . F 4 HOH 146 379 379 HOH HOH A . F 4 HOH 147 380 380 HOH HOH A . F 4 HOH 148 381 381 HOH HOH A . F 4 HOH 149 382 382 HOH HOH A . F 4 HOH 150 383 383 HOH HOH A . F 4 HOH 151 384 384 HOH HOH A . F 4 HOH 152 385 385 HOH HOH A . F 4 HOH 153 386 386 HOH HOH A . F 4 HOH 154 387 387 HOH HOH A . F 4 HOH 155 388 388 HOH HOH A . F 4 HOH 156 389 389 HOH HOH A . F 4 HOH 157 390 390 HOH HOH A . F 4 HOH 158 391 391 HOH HOH A . F 4 HOH 159 392 392 HOH HOH A . F 4 HOH 160 393 393 HOH HOH A . F 4 HOH 161 394 394 HOH HOH A . F 4 HOH 162 395 395 HOH HOH A . F 4 HOH 163 396 396 HOH HOH A . F 4 HOH 164 397 397 HOH HOH A . F 4 HOH 165 398 398 HOH HOH A . F 4 HOH 166 399 399 HOH HOH A . F 4 HOH 167 400 400 HOH HOH A . F 4 HOH 168 401 401 HOH HOH A . F 4 HOH 169 402 402 HOH HOH A . F 4 HOH 170 403 403 HOH HOH A . F 4 HOH 171 404 404 HOH HOH A . F 4 HOH 172 405 405 HOH HOH A . F 4 HOH 173 406 406 HOH HOH A . F 4 HOH 174 407 407 HOH HOH A . F 4 HOH 175 408 408 HOH HOH A . F 4 HOH 176 409 409 HOH HOH A . F 4 HOH 177 410 410 HOH HOH A . F 4 HOH 178 411 411 HOH HOH A . F 4 HOH 179 412 412 HOH HOH A . F 4 HOH 180 413 413 HOH HOH A . F 4 HOH 181 414 414 HOH HOH A . F 4 HOH 182 415 415 HOH HOH A . F 4 HOH 183 416 416 HOH HOH A . F 4 HOH 184 417 417 HOH HOH A . F 4 HOH 185 418 418 HOH HOH A . F 4 HOH 186 419 419 HOH HOH A . F 4 HOH 187 420 420 HOH HOH A . F 4 HOH 188 421 421 HOH HOH A . F 4 HOH 189 422 422 HOH HOH A . F 4 HOH 190 423 423 HOH HOH A . F 4 HOH 191 424 424 HOH HOH A . F 4 HOH 192 425 425 HOH HOH A . F 4 HOH 193 426 426 HOH HOH A . F 4 HOH 194 427 427 HOH HOH A . F 4 HOH 195 428 428 HOH HOH A . F 4 HOH 196 429 429 HOH HOH A . F 4 HOH 197 430 430 HOH HOH A . F 4 HOH 198 431 431 HOH HOH A . F 4 HOH 199 432 432 HOH HOH A . F 4 HOH 200 433 433 HOH HOH A . F 4 HOH 201 434 434 HOH HOH A . F 4 HOH 202 435 435 HOH HOH A . F 4 HOH 203 436 436 HOH HOH A . F 4 HOH 204 437 437 HOH HOH A . F 4 HOH 205 438 438 HOH HOH A . F 4 HOH 206 439 439 HOH HOH A . F 4 HOH 207 440 440 HOH HOH A . F 4 HOH 208 441 441 HOH HOH A . F 4 HOH 209 442 442 HOH HOH A . F 4 HOH 210 443 443 HOH HOH A . F 4 HOH 211 444 444 HOH HOH A . F 4 HOH 212 445 445 HOH HOH A . F 4 HOH 213 446 446 HOH HOH A . F 4 HOH 214 447 447 HOH HOH A . F 4 HOH 215 448 448 HOH HOH A . F 4 HOH 216 449 449 HOH HOH A . F 4 HOH 217 450 450 HOH HOH A . F 4 HOH 218 451 451 HOH HOH A . F 4 HOH 219 452 452 HOH HOH A . F 4 HOH 220 453 453 HOH HOH A . F 4 HOH 221 454 454 HOH HOH A . F 4 HOH 222 455 455 HOH HOH A . F 4 HOH 223 456 456 HOH HOH A . F 4 HOH 224 457 457 HOH HOH A . F 4 HOH 225 458 458 HOH HOH A . F 4 HOH 226 459 459 HOH HOH A . F 4 HOH 227 460 460 HOH HOH A . F 4 HOH 228 461 461 HOH HOH A . F 4 HOH 229 462 462 HOH HOH A . F 4 HOH 230 463 463 HOH HOH A . F 4 HOH 231 464 464 HOH HOH A . F 4 HOH 232 465 465 HOH HOH A . F 4 HOH 233 466 466 HOH HOH A . F 4 HOH 234 467 467 HOH HOH A . F 4 HOH 235 468 468 HOH HOH A . F 4 HOH 236 469 469 HOH HOH A . F 4 HOH 237 470 470 HOH HOH A . F 4 HOH 238 471 471 HOH HOH A . F 4 HOH 239 472 472 HOH HOH A . F 4 HOH 240 473 473 HOH HOH A . F 4 HOH 241 474 474 HOH HOH A . F 4 HOH 242 475 475 HOH HOH A . F 4 HOH 243 476 476 HOH HOH A . F 4 HOH 244 477 477 HOH HOH A . F 4 HOH 245 478 478 HOH HOH A . F 4 HOH 246 479 479 HOH HOH A . F 4 HOH 247 480 480 HOH HOH A . F 4 HOH 248 481 481 HOH HOH A . F 4 HOH 249 482 482 HOH HOH A . F 4 HOH 250 483 483 HOH HOH A . F 4 HOH 251 484 484 HOH HOH A . F 4 HOH 252 485 485 HOH HOH A . F 4 HOH 253 486 486 HOH HOH A . F 4 HOH 254 487 487 HOH HOH A . F 4 HOH 255 488 488 HOH HOH A . F 4 HOH 256 489 489 HOH HOH A . F 4 HOH 257 490 490 HOH HOH A . F 4 HOH 258 491 491 HOH HOH A . F 4 HOH 259 492 492 HOH HOH A . F 4 HOH 260 493 493 HOH HOH A . F 4 HOH 261 494 494 HOH HOH A . F 4 HOH 262 495 495 HOH HOH A . F 4 HOH 263 496 496 HOH HOH A . F 4 HOH 264 497 497 HOH HOH A . F 4 HOH 265 498 498 HOH HOH A . F 4 HOH 266 499 499 HOH HOH A . F 4 HOH 267 500 500 HOH HOH A . F 4 HOH 268 501 501 HOH HOH A . F 4 HOH 269 502 502 HOH HOH A . F 4 HOH 270 503 503 HOH HOH A . F 4 HOH 271 504 504 HOH HOH A . F 4 HOH 272 505 505 HOH HOH A . F 4 HOH 273 506 506 HOH HOH A . F 4 HOH 274 507 507 HOH HOH A . F 4 HOH 275 508 508 HOH HOH A . F 4 HOH 276 509 509 HOH HOH A . F 4 HOH 277 510 510 HOH HOH A . F 4 HOH 278 511 511 HOH HOH A . F 4 HOH 279 512 512 HOH HOH A . F 4 HOH 280 513 513 HOH HOH A . F 4 HOH 281 514 514 HOH HOH A . F 4 HOH 282 515 515 HOH HOH A . F 4 HOH 283 516 516 HOH HOH A . F 4 HOH 284 517 517 HOH HOH A . F 4 HOH 285 518 518 HOH HOH A . F 4 HOH 286 519 519 HOH HOH A . F 4 HOH 287 520 520 HOH HOH A . F 4 HOH 288 521 521 HOH HOH A . F 4 HOH 289 522 522 HOH HOH A . F 4 HOH 290 523 523 HOH HOH A . F 4 HOH 291 524 524 HOH HOH A . F 4 HOH 292 525 525 HOH HOH A . F 4 HOH 293 526 526 HOH HOH A . F 4 HOH 294 527 527 HOH HOH A . F 4 HOH 295 528 528 HOH HOH A . F 4 HOH 296 529 529 HOH HOH A . F 4 HOH 297 530 530 HOH HOH A . F 4 HOH 298 531 531 HOH HOH A . F 4 HOH 299 532 532 HOH HOH A . F 4 HOH 300 533 533 HOH HOH A . F 4 HOH 301 534 534 HOH HOH A . F 4 HOH 302 535 535 HOH HOH A . F 4 HOH 303 536 536 HOH HOH A . F 4 HOH 304 537 537 HOH HOH A . F 4 HOH 305 538 538 HOH HOH A . F 4 HOH 306 539 539 HOH HOH A . F 4 HOH 307 540 540 HOH HOH A . F 4 HOH 308 541 541 HOH HOH A . F 4 HOH 309 542 542 HOH HOH A . F 4 HOH 310 543 543 HOH HOH A . F 4 HOH 311 544 544 HOH HOH A . F 4 HOH 312 545 545 HOH HOH A . F 4 HOH 313 546 546 HOH HOH A . F 4 HOH 314 547 547 HOH HOH A . F 4 HOH 315 548 548 HOH HOH A . F 4 HOH 316 549 549 HOH HOH A . F 4 HOH 317 550 550 HOH HOH A . F 4 HOH 318 551 551 HOH HOH A . F 4 HOH 319 552 552 HOH HOH A . F 4 HOH 320 553 553 HOH HOH A . F 4 HOH 321 554 554 HOH HOH A . F 4 HOH 322 555 555 HOH HOH A . F 4 HOH 323 556 556 HOH HOH A . F 4 HOH 324 557 557 HOH HOH A . F 4 HOH 325 558 558 HOH HOH A . F 4 HOH 326 559 559 HOH HOH A . F 4 HOH 327 560 560 HOH HOH A . F 4 HOH 328 561 561 HOH HOH A . F 4 HOH 329 562 562 HOH HOH A . F 4 HOH 330 563 563 HOH HOH A . F 4 HOH 331 564 564 HOH HOH A . F 4 HOH 332 565 565 HOH HOH A . F 4 HOH 333 566 566 HOH HOH A . F 4 HOH 334 567 567 HOH HOH A . F 4 HOH 335 568 568 HOH HOH A . F 4 HOH 336 569 569 HOH HOH A . F 4 HOH 337 570 570 HOH HOH A . F 4 HOH 338 571 571 HOH HOH A . F 4 HOH 339 572 572 HOH HOH A . F 4 HOH 340 573 573 HOH HOH A . F 4 HOH 341 574 574 HOH HOH A . F 4 HOH 342 575 575 HOH HOH A . F 4 HOH 343 576 576 HOH HOH A . F 4 HOH 344 577 577 HOH HOH A . F 4 HOH 345 578 578 HOH HOH A . F 4 HOH 346 579 579 HOH HOH A . F 4 HOH 347 580 580 HOH HOH A . F 4 HOH 348 581 581 HOH HOH A . F 4 HOH 349 582 582 HOH HOH A . F 4 HOH 350 583 583 HOH HOH A . F 4 HOH 351 584 584 HOH HOH A . F 4 HOH 352 585 585 HOH HOH A . F 4 HOH 353 586 586 HOH HOH A . F 4 HOH 354 587 587 HOH HOH A . F 4 HOH 355 588 588 HOH HOH A . F 4 HOH 356 589 589 HOH HOH A . F 4 HOH 357 590 590 HOH HOH A . F 4 HOH 358 591 591 HOH HOH A . F 4 HOH 359 592 592 HOH HOH A . F 4 HOH 360 593 593 HOH HOH A . F 4 HOH 361 594 594 HOH HOH A . F 4 HOH 362 595 595 HOH HOH A . F 4 HOH 363 596 596 HOH HOH A . F 4 HOH 364 597 597 HOH HOH A . F 4 HOH 365 598 598 HOH HOH A . F 4 HOH 366 599 599 HOH HOH A . F 4 HOH 367 600 600 HOH HOH A . F 4 HOH 368 601 601 HOH HOH A . F 4 HOH 369 602 602 HOH HOH A . F 4 HOH 370 603 603 HOH HOH A . F 4 HOH 371 604 604 HOH HOH A . F 4 HOH 372 605 605 HOH HOH A . F 4 HOH 373 606 606 HOH HOH A . F 4 HOH 374 607 607 HOH HOH A . F 4 HOH 375 608 608 HOH HOH A . F 4 HOH 376 609 609 HOH HOH A . F 4 HOH 377 610 610 HOH HOH A . F 4 HOH 378 611 611 HOH HOH A . F 4 HOH 379 612 612 HOH HOH A . F 4 HOH 380 613 613 HOH HOH A . F 4 HOH 381 614 614 HOH HOH A . F 4 HOH 382 615 615 HOH HOH A . F 4 HOH 383 616 616 HOH HOH A . F 4 HOH 384 617 617 HOH HOH A . F 4 HOH 385 618 618 HOH HOH A . F 4 HOH 386 619 619 HOH HOH A . F 4 HOH 387 620 620 HOH HOH A . F 4 HOH 388 621 621 HOH HOH A . F 4 HOH 389 622 622 HOH HOH A . F 4 HOH 390 623 623 HOH HOH A . F 4 HOH 391 624 624 HOH HOH A . F 4 HOH 392 625 625 HOH HOH A . F 4 HOH 393 626 626 HOH HOH A . F 4 HOH 394 627 627 HOH HOH A . F 4 HOH 395 628 628 HOH HOH A . F 4 HOH 396 629 629 HOH HOH A . F 4 HOH 397 630 630 HOH HOH A . F 4 HOH 398 631 631 HOH HOH A . F 4 HOH 399 632 632 HOH HOH A . F 4 HOH 400 633 633 HOH HOH A . F 4 HOH 401 634 634 HOH HOH A . F 4 HOH 402 635 635 HOH HOH A . F 4 HOH 403 636 636 HOH HOH A . F 4 HOH 404 637 637 HOH HOH A . F 4 HOH 405 638 638 HOH HOH A . F 4 HOH 406 639 639 HOH HOH A . F 4 HOH 407 640 640 HOH HOH A . F 4 HOH 408 641 641 HOH HOH A . F 4 HOH 409 642 642 HOH HOH A . F 4 HOH 410 643 643 HOH HOH A . F 4 HOH 411 644 644 HOH HOH A . F 4 HOH 412 645 645 HOH HOH A . F 4 HOH 413 646 646 HOH HOH A . F 4 HOH 414 647 647 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A NRQ 79 A NRQ 67 ? MET 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 2 A NRQ 79 A NRQ 67 ? TYR 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 3 A NRQ 79 A NRQ 67 ? GLY 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 4 A CH6 79 A CH6 67 ? MET 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 5 A CH6 79 A CH6 67 ? TYR 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 6 A CH6 79 A CH6 67 ? GLY 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 7 A EYG 79 A EYG 67 ? MET 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 8 A EYG 79 A EYG 67 ? TYR 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' 9 A EYG 79 A EYG 67 ? GLY 'CIRCULARIZED TRI-PEPTIDE CHROMOPHORE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLU 23 ? A GLU 10 ? 1_555 NA ? D NA . ? A NA 234 ? 1_555 O ? F HOH . ? A HOH 489 ? 1_555 108.0 ? 2 OG1 ? A THR 54 ? A THR 41 ? 1_555 NA ? E NA . ? A NA 235 ? 1_555 O ? F HOH . ? A HOH 631 ? 1_555 77.0 ? 3 O ? F HOH . ? A HOH 244 ? 1_555 NA ? B NA . ? A NA 232 ? 1_555 O ? F HOH . ? A HOH 600 ? 1_555 118.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-01-08 4 'Structure model' 1 3 2015-03-04 5 'Structure model' 1 4 2017-11-08 6 'Structure model' 1 5 2017-11-15 7 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Derived calculations' 4 5 'Structure model' Advisory 5 5 'Structure model' 'Refinement description' 6 6 'Structure model' 'Database references' 7 7 'Structure model' Advisory 8 7 'Structure model' 'Atomic model' 9 7 'Structure model' 'Data collection' 10 7 'Structure model' 'Database references' 11 7 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 5 'Structure model' software 3 6 'Structure model' citation 4 6 'Structure model' citation_author 5 7 'Structure model' atom_site 6 7 'Structure model' atom_site_anisotrop 7 7 'Structure model' chem_comp_atom 8 7 'Structure model' chem_comp_bond 9 7 'Structure model' database_2 10 7 'Structure model' pdbx_struct_conn_angle 11 7 'Structure model' pdbx_unobs_or_zero_occ_atoms 12 7 'Structure model' pdbx_validate_chiral 13 7 'Structure model' pdbx_validate_close_contact 14 7 'Structure model' struct_conn 15 7 'Structure model' struct_ref_seq_dif 16 7 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 7 'Structure model' '_atom_site.auth_atom_id' 2 7 'Structure model' '_atom_site.label_atom_id' 3 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 4 7 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 5 7 'Structure model' '_database_2.pdbx_DOI' 6 7 'Structure model' '_database_2.pdbx_database_accession' 7 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 7 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 7 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 7 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 7 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 7 'Structure model' '_pdbx_struct_conn_angle.value' 22 7 'Structure model' '_pdbx_validate_chiral.auth_atom_id' 23 7 'Structure model' '_struct_conn.pdbx_dist_value' 24 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 7 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 26 7 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 27 7 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 7 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 7 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 7 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 7 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 7 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 7 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 7 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 7 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 7 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 7 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 7 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 7 'Structure model' '_struct_ref_seq_dif.details' 40 7 'Structure model' '_struct_site.pdbx_auth_asym_id' 41 7 'Structure model' '_struct_site.pdbx_auth_comp_id' 42 7 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal iMOSFLM 'data reduction' . ? 1 REFMAC refinement 5.5.0088 ? 2 ACORN phasing . ? 3 # _pdbx_entry_details.entry_id 3NED _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'MET 66, TYR 68, and GLY 69 CIRCULARIZED INTO ONE CHROMOPHORE' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C3 A EYG 67 ? C N A SER 69 ? ? 1.34 2 1 O13 A EYG 67 ? C O A HOH 279 ? ? 1.66 3 1 ND2 A ASN 128 ? B O A HOH 261 ? ? 1.69 4 1 OG1 A THR 180 ? B O A HOH 370 ? ? 1.87 5 1 OH A TYR 151 ? B O A HOH 593 ? ? 1.95 6 1 OD1 A ASP 132 ? ? O A HOH 402 ? ? 2.06 7 1 CD A LYS 168 ? ? O A HOH 425 ? ? 2.06 8 1 NH1 A ARG 164 ? B O A HOH 421 ? ? 2.06 9 1 O A HOH 347 ? ? O A HOH 375 ? ? 2.15 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CA A PHE 65 ? ? C A PHE 65 ? A 1.878 1.525 0.353 0.026 N 2 1 CA A PHE 65 ? ? C A PHE 65 ? B 1.266 1.525 -0.259 0.026 N 3 1 CD A GLU 89 ? A OE1 A GLU 89 ? A 1.323 1.252 0.071 0.011 N 4 1 CB A CYS 146 ? A SG A CYS 146 ? A 1.956 1.818 0.138 0.017 N 5 1 CB A CYS 146 ? B SG A CYS 146 ? B 1.639 1.812 -0.173 0.016 N 6 1 CB A SER 147 ? A OG A SER 147 ? A 1.337 1.418 -0.081 0.013 N 7 1 CB A TYR 181 ? B CG A TYR 181 ? B 1.418 1.512 -0.094 0.015 N 8 1 CE A LYS 231 ? ? NZ A LYS 231 ? ? 1.684 1.486 0.198 0.025 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 36 ? ? CZ A ARG 36 ? ? NH1 A ARG 36 ? ? 124.45 120.30 4.15 0.50 N 2 1 C A GLU 89 ? B N A GLY 90 ? ? CA A GLY 90 ? ? 135.92 122.30 13.62 2.10 Y 3 1 CD A LYS 92 ? ? CE A LYS 92 ? ? NZ A LYS 92 ? ? 94.29 111.70 -17.41 2.30 N 4 1 CD A LYS 121 ? A CE A LYS 121 ? A NZ A LYS 121 ? A 135.97 111.70 24.27 2.30 N 5 1 CG A ARG 125 ? B CD A ARG 125 ? B NE A ARG 125 ? B 127.70 111.80 15.90 2.10 N 6 1 CB A LEU 165 ? B CG A LEU 165 ? B CD2 A LEU 165 ? B 90.33 111.00 -20.67 1.70 N 7 1 CB A ASP 174 ? ? CG A ASP 174 ? ? OD2 A ASP 174 ? ? 112.61 118.30 -5.69 0.90 N 8 1 CB A TYR 181 ? B CA A TYR 181 ? B C A TYR 181 ? ? 92.75 110.40 -17.65 2.00 N 9 1 NE A ARG 220 ? ? CZ A ARG 220 ? ? NH1 A ARG 220 ? ? 124.46 120.30 4.16 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 55 ? ? -94.32 37.94 2 1 TYR A 72 ? ? -105.02 41.26 3 1 MET A 141 ? ? -147.40 51.57 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA1 _pdbx_validate_chiral.label_alt_id C _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id EYG _pdbx_validate_chiral.auth_seq_id 67 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 2 ? CG ? A GLU 15 CG 2 1 Y 0 A GLU 2 ? CD ? A GLU 15 CD 3 1 Y 0 A GLU 2 ? OE1 ? A GLU 15 OE1 4 1 Y 0 A GLU 2 ? OE2 ? A GLU 15 OE2 5 1 Y 1 A NRQ 67 ? SD ? A NRQ 79 SD 6 1 Y 1 A NRQ 67 ? CE ? A NRQ 79 CE 7 1 Y 0 A LYS 168 ? CE ? A LYS 179 CE 8 1 Y 0 A LYS 168 ? NZ ? A LYS 179 NZ 9 1 Y 0 A LYS 185 ? CG ? A LYS 196 CG 10 1 Y 0 A LYS 185 ? CD ? A LYS 196 CD 11 1 Y 0 A LYS 185 ? CE ? A LYS 196 CE 12 1 Y 0 A LYS 185 ? NZ ? A LYS 196 NZ 13 1 Y 0 A LYS 231 ? NZ ? A LYS 242 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -12 ? A MET 1 2 1 Y 1 A GLY -11 ? A GLY 2 3 1 Y 1 A HIS -10 ? A HIS 3 4 1 Y 1 A HIS -9 ? A HIS 4 5 1 Y 1 A HIS -8 ? A HIS 5 6 1 Y 1 A HIS -7 ? A HIS 6 7 1 Y 1 A HIS -6 ? A HIS 7 8 1 Y 1 A HIS -5 ? A HIS 8 9 1 Y 1 A GLY -4 ? A GLY 9 10 1 Y 1 A VAL -3 ? A VAL 10 11 1 Y 1 A SER -2 ? A SER 11 12 1 Y 1 A LYS -1 ? A LYS 12 13 1 Y 1 A GLY 0 ? A GLY 13 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CH6 N1 N N N 81 CH6 CE C N N 82 CH6 SD S N N 83 CH6 CG1 C N N 84 CH6 CB1 C N N 85 CH6 CA1 C N S 86 CH6 C1 C N N 87 CH6 N2 N N N 88 CH6 OH O N N 89 CH6 CD2 C Y N 90 CH6 CE2 C Y N 91 CH6 CZ C Y N 92 CH6 CE1 C Y N 93 CH6 CD1 C Y N 94 CH6 CG2 C Y N 95 CH6 CB2 C N N 96 CH6 CA2 C N N 97 CH6 C2 C N N 98 CH6 O2 O N N 99 CH6 N3 N N N 100 CH6 CA3 C N N 101 CH6 C3 C N N 102 CH6 O3 O N N 103 CH6 OXT O N N 104 CH6 H H N N 105 CH6 H2 H N N 106 CH6 HE1A H N N 107 CH6 HE2A H N N 108 CH6 HE3 H N N 109 CH6 HG11 H N N 110 CH6 HG12 H N N 111 CH6 HB11 H N N 112 CH6 HB12 H N N 113 CH6 HA1 H N N 114 CH6 HOH H N N 115 CH6 HD2 H N N 116 CH6 HE2 H N N 117 CH6 HE1 H N N 118 CH6 HD1 H N N 119 CH6 HB2 H N N 120 CH6 HA31 H N N 121 CH6 HA32 H N N 122 CH6 HXT H N N 123 CYS N N N N 124 CYS CA C N R 125 CYS C C N N 126 CYS O O N N 127 CYS CB C N N 128 CYS SG S N N 129 CYS OXT O N N 130 CYS H H N N 131 CYS H2 H N N 132 CYS HA H N N 133 CYS HB2 H N N 134 CYS HB3 H N N 135 CYS HG H N N 136 CYS HXT H N N 137 EYG C3 C N N 138 EYG O3 O N N 139 EYG N1 N N N 140 EYG C2 C N N 141 EYG O2 O N N 142 EYG N3 N N N 143 EYG CB C N N 144 EYG SD S N N 145 EYG CE C N N 146 EYG CG C N N 147 EYG OH O N N 148 EYG CZ C Y N 149 EYG C1 C N R 150 EYG O13 O N N 151 EYG N2 N N N 152 EYG CA1 C N R 153 EYG CA3 C N N 154 EYG CA2 C N N 155 EYG CB2 C N N 156 EYG CD1 C Y N 157 EYG CD2 C Y N 158 EYG CE1 C Y N 159 EYG CE2 C Y N 160 EYG CG2 C Y N 161 EYG H H N N 162 EYG H2 H N N 163 EYG OXT O N N 164 EYG HB H N N 165 EYG HBA H N N 166 EYG HE H N N 167 EYG HEA H N N 168 EYG HEB H N N 169 EYG HG H N N 170 EYG HGA H N N 171 EYG HOH H N N 172 EYG HO13 H N N 173 EYG HN2 H N N 174 EYG HA1 H N N 175 EYG HA31 H N N 176 EYG HA32 H N N 177 EYG HB2 H N N 178 EYG HD1 H N N 179 EYG HD2 H N N 180 EYG HE1 H N N 181 EYG HE2 H N N 182 EYG HXT H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 ILE N N N N 257 ILE CA C N S 258 ILE C C N N 259 ILE O O N N 260 ILE CB C N S 261 ILE CG1 C N N 262 ILE CG2 C N N 263 ILE CD1 C N N 264 ILE OXT O N N 265 ILE H H N N 266 ILE H2 H N N 267 ILE HA H N N 268 ILE HB H N N 269 ILE HG12 H N N 270 ILE HG13 H N N 271 ILE HG21 H N N 272 ILE HG22 H N N 273 ILE HG23 H N N 274 ILE HD11 H N N 275 ILE HD12 H N N 276 ILE HD13 H N N 277 ILE HXT H N N 278 LEU N N N N 279 LEU CA C N S 280 LEU C C N N 281 LEU O O N N 282 LEU CB C N N 283 LEU CG C N N 284 LEU CD1 C N N 285 LEU CD2 C N N 286 LEU OXT O N N 287 LEU H H N N 288 LEU H2 H N N 289 LEU HA H N N 290 LEU HB2 H N N 291 LEU HB3 H N N 292 LEU HG H N N 293 LEU HD11 H N N 294 LEU HD12 H N N 295 LEU HD13 H N N 296 LEU HD21 H N N 297 LEU HD22 H N N 298 LEU HD23 H N N 299 LEU HXT H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 NA NA NA N N 346 NRQ N1 N N N 347 NRQ CE C N N 348 NRQ SD S N N 349 NRQ CG1 C N N 350 NRQ CB1 C N N 351 NRQ CA1 C N N 352 NRQ C1 C N N 353 NRQ N2 N N N 354 NRQ OH O N N 355 NRQ CD2 C Y N 356 NRQ CE2 C Y N 357 NRQ CZ C Y N 358 NRQ CE1 C Y N 359 NRQ CD1 C Y N 360 NRQ CG2 C Y N 361 NRQ CB2 C N N 362 NRQ CA2 C N N 363 NRQ C2 C N N 364 NRQ O2 O N N 365 NRQ N3 N N N 366 NRQ CA3 C N N 367 NRQ C3 C N N 368 NRQ O3 O N N 369 NRQ OXT O N N 370 NRQ H H N N 371 NRQ HE1A H N N 372 NRQ HE2A H N N 373 NRQ HE3 H N N 374 NRQ HG11 H N N 375 NRQ HG12 H N N 376 NRQ HB11 H N N 377 NRQ HB12 H N N 378 NRQ HOH H N N 379 NRQ HD2 H N N 380 NRQ HE2 H N N 381 NRQ HE1 H N N 382 NRQ HD1 H N N 383 NRQ HB2 H N N 384 NRQ HA31 H N N 385 NRQ HA32 H N N 386 NRQ HXT H N N 387 PHE N N N N 388 PHE CA C N S 389 PHE C C N N 390 PHE O O N N 391 PHE CB C N N 392 PHE CG C Y N 393 PHE CD1 C Y N 394 PHE CD2 C Y N 395 PHE CE1 C Y N 396 PHE CE2 C Y N 397 PHE CZ C Y N 398 PHE OXT O N N 399 PHE H H N N 400 PHE H2 H N N 401 PHE HA H N N 402 PHE HB2 H N N 403 PHE HB3 H N N 404 PHE HD1 H N N 405 PHE HD2 H N N 406 PHE HE1 H N N 407 PHE HE2 H N N 408 PHE HZ H N N 409 PHE HXT H N N 410 PRO N N N N 411 PRO CA C N S 412 PRO C C N N 413 PRO O O N N 414 PRO CB C N N 415 PRO CG C N N 416 PRO CD C N N 417 PRO OXT O N N 418 PRO H H N N 419 PRO HA H N N 420 PRO HB2 H N N 421 PRO HB3 H N N 422 PRO HG2 H N N 423 PRO HG3 H N N 424 PRO HD2 H N N 425 PRO HD3 H N N 426 PRO HXT H N N 427 SER N N N N 428 SER CA C N S 429 SER C C N N 430 SER O O N N 431 SER CB C N N 432 SER OG O N N 433 SER OXT O N N 434 SER H H N N 435 SER H2 H N N 436 SER HA H N N 437 SER HB2 H N N 438 SER HB3 H N N 439 SER HG H N N 440 SER HXT H N N 441 THR N N N N 442 THR CA C N S 443 THR C C N N 444 THR O O N N 445 THR CB C N R 446 THR OG1 O N N 447 THR CG2 C N N 448 THR OXT O N N 449 THR H H N N 450 THR H2 H N N 451 THR HA H N N 452 THR HB H N N 453 THR HG1 H N N 454 THR HG21 H N N 455 THR HG22 H N N 456 THR HG23 H N N 457 THR HXT H N N 458 TRP N N N N 459 TRP CA C N S 460 TRP C C N N 461 TRP O O N N 462 TRP CB C N N 463 TRP CG C Y N 464 TRP CD1 C Y N 465 TRP CD2 C Y N 466 TRP NE1 N Y N 467 TRP CE2 C Y N 468 TRP CE3 C Y N 469 TRP CZ2 C Y N 470 TRP CZ3 C Y N 471 TRP CH2 C Y N 472 TRP OXT O N N 473 TRP H H N N 474 TRP H2 H N N 475 TRP HA H N N 476 TRP HB2 H N N 477 TRP HB3 H N N 478 TRP HD1 H N N 479 TRP HE1 H N N 480 TRP HE3 H N N 481 TRP HZ2 H N N 482 TRP HZ3 H N N 483 TRP HH2 H N N 484 TRP HXT H N N 485 TYR N N N N 486 TYR CA C N S 487 TYR C C N N 488 TYR O O N N 489 TYR CB C N N 490 TYR CG C Y N 491 TYR CD1 C Y N 492 TYR CD2 C Y N 493 TYR CE1 C Y N 494 TYR CE2 C Y N 495 TYR CZ C Y N 496 TYR OH O N N 497 TYR OXT O N N 498 TYR H H N N 499 TYR H2 H N N 500 TYR HA H N N 501 TYR HB2 H N N 502 TYR HB3 H N N 503 TYR HD1 H N N 504 TYR HD2 H N N 505 TYR HE1 H N N 506 TYR HE2 H N N 507 TYR HH H N N 508 TYR HXT H N N 509 VAL N N N N 510 VAL CA C N S 511 VAL C C N N 512 VAL O O N N 513 VAL CB C N N 514 VAL CG1 C N N 515 VAL CG2 C N N 516 VAL OXT O N N 517 VAL H H N N 518 VAL H2 H N N 519 VAL HA H N N 520 VAL HB H N N 521 VAL HG11 H N N 522 VAL HG12 H N N 523 VAL HG13 H N N 524 VAL HG21 H N N 525 VAL HG22 H N N 526 VAL HG23 H N N 527 VAL HXT H N N 528 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CH6 CE SD sing N N 76 CH6 SD CG1 sing N N 77 CH6 CG1 CB1 sing N N 78 CH6 OH CZ sing N N 79 CH6 CB1 CA1 sing N N 80 CH6 OXT C3 sing N N 81 CH6 CE1 CZ doub Y N 82 CH6 CE1 CD1 sing Y N 83 CH6 CZ CE2 sing Y N 84 CH6 CD1 CG2 doub Y N 85 CH6 CA1 C1 sing N N 86 CH6 CA1 N1 sing N N 87 CH6 CE2 CD2 doub Y N 88 CH6 N2 C1 doub N N 89 CH6 N2 CA2 sing N N 90 CH6 C1 N3 sing N N 91 CH6 CG2 CD2 sing Y N 92 CH6 CG2 CB2 sing N N 93 CH6 C3 O3 doub N N 94 CH6 C3 CA3 sing N N 95 CH6 CA2 CB2 doub N N 96 CH6 CA2 C2 sing N N 97 CH6 N3 C2 sing N N 98 CH6 N3 CA3 sing N N 99 CH6 C2 O2 doub N N 100 CH6 N1 H sing N N 101 CH6 N1 H2 sing N N 102 CH6 CE HE1A sing N N 103 CH6 CE HE2A sing N N 104 CH6 CE HE3 sing N N 105 CH6 CG1 HG11 sing N N 106 CH6 CG1 HG12 sing N N 107 CH6 CB1 HB11 sing N N 108 CH6 CB1 HB12 sing N Z 109 CH6 CA1 HA1 sing N N 110 CH6 OH HOH sing N N 111 CH6 CD2 HD2 sing N N 112 CH6 CE2 HE2 sing N N 113 CH6 CE1 HE1 sing N N 114 CH6 CD1 HD1 sing N N 115 CH6 CB2 HB2 sing N N 116 CH6 CA3 HA31 sing N N 117 CH6 CA3 HA32 sing N N 118 CH6 OXT HXT sing N N 119 CYS N CA sing N N 120 CYS N H sing N N 121 CYS N H2 sing N N 122 CYS CA C sing N N 123 CYS CA CB sing N N 124 CYS CA HA sing N N 125 CYS C O doub N N 126 CYS C OXT sing N N 127 CYS CB SG sing N N 128 CYS CB HB2 sing N N 129 CYS CB HB3 sing N N 130 CYS SG HG sing N N 131 CYS OXT HXT sing N N 132 EYG O3 C3 doub N N 133 EYG CA1 N1 sing N N 134 EYG N1 H sing N N 135 EYG C2 CA2 sing N N 136 EYG C2 N3 sing N N 137 EYG O2 C2 doub N N 138 EYG N3 C1 sing N N 139 EYG CB CG sing N N 140 EYG SD CE sing N N 141 EYG CG SD sing N N 142 EYG CZ OH sing N N 143 EYG CZ CE1 sing Y N 144 EYG C1 O13 sing N N 145 EYG C1 CA1 sing N N 146 EYG N2 C1 sing N N 147 EYG CA1 CB sing N N 148 EYG CA3 C3 sing N N 149 EYG CA3 N3 sing N N 150 EYG CA2 N2 sing N N 151 EYG CB2 CA2 doub N N 152 EYG CB2 CG2 sing N N 153 EYG CD1 CE1 doub Y N 154 EYG CD2 CE2 sing Y N 155 EYG CD2 CG2 doub Y N 156 EYG CE2 CZ doub Y N 157 EYG CG2 CD1 sing Y N 158 EYG C3 OXT sing N N 159 EYG N1 H2 sing N N 160 EYG CB HB sing N N 161 EYG CB HBA sing N N 162 EYG CE HE sing N N 163 EYG CE HEA sing N N 164 EYG CE HEB sing N N 165 EYG CG HG sing N N 166 EYG CG HGA sing N Z 167 EYG OH HOH sing N N 168 EYG O13 HO13 sing N N 169 EYG N2 HN2 sing N N 170 EYG CA1 HA1 sing N N 171 EYG CA3 HA31 sing N N 172 EYG CA3 HA32 sing N N 173 EYG CB2 HB2 sing N N 174 EYG CD1 HD1 sing N N 175 EYG CD2 HD2 sing N N 176 EYG CE1 HE1 sing N N 177 EYG CE2 HE2 sing N N 178 EYG OXT HXT sing N N 179 GLN N CA sing N N 180 GLN N H sing N N 181 GLN N H2 sing N N 182 GLN CA C sing N N 183 GLN CA CB sing N N 184 GLN CA HA sing N N 185 GLN C O doub N N 186 GLN C OXT sing N N 187 GLN CB CG sing N N 188 GLN CB HB2 sing N N 189 GLN CB HB3 sing N N 190 GLN CG CD sing N N 191 GLN CG HG2 sing N N 192 GLN CG HG3 sing N N 193 GLN CD OE1 doub N N 194 GLN CD NE2 sing N N 195 GLN NE2 HE21 sing N N 196 GLN NE2 HE22 sing N N 197 GLN OXT HXT sing N N 198 GLU N CA sing N N 199 GLU N H sing N N 200 GLU N H2 sing N N 201 GLU CA C sing N N 202 GLU CA CB sing N N 203 GLU CA HA sing N N 204 GLU C O doub N N 205 GLU C OXT sing N N 206 GLU CB CG sing N N 207 GLU CB HB2 sing N N 208 GLU CB HB3 sing N N 209 GLU CG CD sing N N 210 GLU CG HG2 sing N N 211 GLU CG HG3 sing N N 212 GLU CD OE1 doub N N 213 GLU CD OE2 sing N N 214 GLU OE2 HE2 sing N N 215 GLU OXT HXT sing N N 216 GLY N CA sing N N 217 GLY N H sing N N 218 GLY N H2 sing N N 219 GLY CA C sing N N 220 GLY CA HA2 sing N N 221 GLY CA HA3 sing N N 222 GLY C O doub N N 223 GLY C OXT sing N N 224 GLY OXT HXT sing N N 225 HIS N CA sing N N 226 HIS N H sing N N 227 HIS N H2 sing N N 228 HIS CA C sing N N 229 HIS CA CB sing N N 230 HIS CA HA sing N N 231 HIS C O doub N N 232 HIS C OXT sing N N 233 HIS CB CG sing N N 234 HIS CB HB2 sing N N 235 HIS CB HB3 sing N N 236 HIS CG ND1 sing Y N 237 HIS CG CD2 doub Y N 238 HIS ND1 CE1 doub Y N 239 HIS ND1 HD1 sing N N 240 HIS CD2 NE2 sing Y N 241 HIS CD2 HD2 sing N N 242 HIS CE1 NE2 sing Y N 243 HIS CE1 HE1 sing N N 244 HIS NE2 HE2 sing N N 245 HIS OXT HXT sing N N 246 HOH O H1 sing N N 247 HOH O H2 sing N N 248 ILE N CA sing N N 249 ILE N H sing N N 250 ILE N H2 sing N N 251 ILE CA C sing N N 252 ILE CA CB sing N N 253 ILE CA HA sing N N 254 ILE C O doub N N 255 ILE C OXT sing N N 256 ILE CB CG1 sing N N 257 ILE CB CG2 sing N N 258 ILE CB HB sing N N 259 ILE CG1 CD1 sing N N 260 ILE CG1 HG12 sing N N 261 ILE CG1 HG13 sing N N 262 ILE CG2 HG21 sing N N 263 ILE CG2 HG22 sing N N 264 ILE CG2 HG23 sing N N 265 ILE CD1 HD11 sing N N 266 ILE CD1 HD12 sing N N 267 ILE CD1 HD13 sing N N 268 ILE OXT HXT sing N N 269 LEU N CA sing N N 270 LEU N H sing N N 271 LEU N H2 sing N N 272 LEU CA C sing N N 273 LEU CA CB sing N N 274 LEU CA HA sing N N 275 LEU C O doub N N 276 LEU C OXT sing N N 277 LEU CB CG sing N N 278 LEU CB HB2 sing N N 279 LEU CB HB3 sing N N 280 LEU CG CD1 sing N N 281 LEU CG CD2 sing N N 282 LEU CG HG sing N N 283 LEU CD1 HD11 sing N N 284 LEU CD1 HD12 sing N N 285 LEU CD1 HD13 sing N N 286 LEU CD2 HD21 sing N N 287 LEU CD2 HD22 sing N N 288 LEU CD2 HD23 sing N N 289 LEU OXT HXT sing N N 290 LYS N CA sing N N 291 LYS N H sing N N 292 LYS N H2 sing N N 293 LYS CA C sing N N 294 LYS CA CB sing N N 295 LYS CA HA sing N N 296 LYS C O doub N N 297 LYS C OXT sing N N 298 LYS CB CG sing N N 299 LYS CB HB2 sing N N 300 LYS CB HB3 sing N N 301 LYS CG CD sing N N 302 LYS CG HG2 sing N N 303 LYS CG HG3 sing N N 304 LYS CD CE sing N N 305 LYS CD HD2 sing N N 306 LYS CD HD3 sing N N 307 LYS CE NZ sing N N 308 LYS CE HE2 sing N N 309 LYS CE HE3 sing N N 310 LYS NZ HZ1 sing N N 311 LYS NZ HZ2 sing N N 312 LYS NZ HZ3 sing N N 313 LYS OXT HXT sing N N 314 MET N CA sing N N 315 MET N H sing N N 316 MET N H2 sing N N 317 MET CA C sing N N 318 MET CA CB sing N N 319 MET CA HA sing N N 320 MET C O doub N N 321 MET C OXT sing N N 322 MET CB CG sing N N 323 MET CB HB2 sing N N 324 MET CB HB3 sing N N 325 MET CG SD sing N N 326 MET CG HG2 sing N N 327 MET CG HG3 sing N N 328 MET SD CE sing N N 329 MET CE HE1 sing N N 330 MET CE HE2 sing N N 331 MET CE HE3 sing N N 332 MET OXT HXT sing N N 333 NRQ OXT C3 sing N N 334 NRQ CE SD sing N N 335 NRQ SD CG1 sing N N 336 NRQ CG1 CB1 sing N N 337 NRQ C3 O3 doub N N 338 NRQ C3 CA3 sing N N 339 NRQ O2 C2 doub N N 340 NRQ C2 CA2 sing N N 341 NRQ C2 N3 sing N N 342 NRQ CA2 CB2 doub N N 343 NRQ CA2 N2 sing N N 344 NRQ CB2 CG2 sing N N 345 NRQ CD2 CG2 doub Y N 346 NRQ CD2 CE2 sing Y N 347 NRQ N3 C1 sing N N 348 NRQ N3 CA3 sing N N 349 NRQ CG2 CD1 sing Y N 350 NRQ CE2 CZ doub Y N 351 NRQ N2 C1 doub N N 352 NRQ C1 CA1 sing N N 353 NRQ CZ OH sing N N 354 NRQ CZ CE1 sing Y N 355 NRQ CA1 CB1 sing N N 356 NRQ CA1 N1 doub N N 357 NRQ CD1 CE1 doub Y N 358 NRQ N1 H sing N N 359 NRQ CE HE1A sing N N 360 NRQ CE HE2A sing N N 361 NRQ CE HE3 sing N N 362 NRQ CG1 HG11 sing N Z 363 NRQ CG1 HG12 sing N N 364 NRQ CB1 HB11 sing N N 365 NRQ CB1 HB12 sing N N 366 NRQ OH HOH sing N N 367 NRQ CD2 HD2 sing N N 368 NRQ CE2 HE2 sing N N 369 NRQ CE1 HE1 sing N N 370 NRQ CD1 HD1 sing N N 371 NRQ CB2 HB2 sing N N 372 NRQ CA3 HA31 sing N N 373 NRQ CA3 HA32 sing N N 374 NRQ OXT HXT sing N N 375 PHE N CA sing N N 376 PHE N H sing N N 377 PHE N H2 sing N N 378 PHE CA C sing N N 379 PHE CA CB sing N N 380 PHE CA HA sing N N 381 PHE C O doub N N 382 PHE C OXT sing N N 383 PHE CB CG sing N N 384 PHE CB HB2 sing N N 385 PHE CB HB3 sing N N 386 PHE CG CD1 doub Y N 387 PHE CG CD2 sing Y N 388 PHE CD1 CE1 sing Y N 389 PHE CD1 HD1 sing N N 390 PHE CD2 CE2 doub Y N 391 PHE CD2 HD2 sing N N 392 PHE CE1 CZ doub Y N 393 PHE CE1 HE1 sing N N 394 PHE CE2 CZ sing Y N 395 PHE CE2 HE2 sing N N 396 PHE CZ HZ sing N N 397 PHE OXT HXT sing N N 398 PRO N CA sing N N 399 PRO N CD sing N N 400 PRO N H sing N N 401 PRO CA C sing N N 402 PRO CA CB sing N N 403 PRO CA HA sing N N 404 PRO C O doub N N 405 PRO C OXT sing N N 406 PRO CB CG sing N N 407 PRO CB HB2 sing N N 408 PRO CB HB3 sing N N 409 PRO CG CD sing N N 410 PRO CG HG2 sing N N 411 PRO CG HG3 sing N N 412 PRO CD HD2 sing N N 413 PRO CD HD3 sing N N 414 PRO OXT HXT sing N N 415 SER N CA sing N N 416 SER N H sing N N 417 SER N H2 sing N N 418 SER CA C sing N N 419 SER CA CB sing N N 420 SER CA HA sing N N 421 SER C O doub N N 422 SER C OXT sing N N 423 SER CB OG sing N N 424 SER CB HB2 sing N N 425 SER CB HB3 sing N N 426 SER OG HG sing N N 427 SER OXT HXT sing N N 428 THR N CA sing N N 429 THR N H sing N N 430 THR N H2 sing N N 431 THR CA C sing N N 432 THR CA CB sing N N 433 THR CA HA sing N N 434 THR C O doub N N 435 THR C OXT sing N N 436 THR CB OG1 sing N N 437 THR CB CG2 sing N N 438 THR CB HB sing N N 439 THR OG1 HG1 sing N N 440 THR CG2 HG21 sing N N 441 THR CG2 HG22 sing N N 442 THR CG2 HG23 sing N N 443 THR OXT HXT sing N N 444 TRP N CA sing N N 445 TRP N H sing N N 446 TRP N H2 sing N N 447 TRP CA C sing N N 448 TRP CA CB sing N N 449 TRP CA HA sing N N 450 TRP C O doub N N 451 TRP C OXT sing N N 452 TRP CB CG sing N N 453 TRP CB HB2 sing N N 454 TRP CB HB3 sing N N 455 TRP CG CD1 doub Y N 456 TRP CG CD2 sing Y N 457 TRP CD1 NE1 sing Y N 458 TRP CD1 HD1 sing N N 459 TRP CD2 CE2 doub Y N 460 TRP CD2 CE3 sing Y N 461 TRP NE1 CE2 sing Y N 462 TRP NE1 HE1 sing N N 463 TRP CE2 CZ2 sing Y N 464 TRP CE3 CZ3 doub Y N 465 TRP CE3 HE3 sing N N 466 TRP CZ2 CH2 doub Y N 467 TRP CZ2 HZ2 sing N N 468 TRP CZ3 CH2 sing Y N 469 TRP CZ3 HZ3 sing N N 470 TRP CH2 HH2 sing N N 471 TRP OXT HXT sing N N 472 TYR N CA sing N N 473 TYR N H sing N N 474 TYR N H2 sing N N 475 TYR CA C sing N N 476 TYR CA CB sing N N 477 TYR CA HA sing N N 478 TYR C O doub N N 479 TYR C OXT sing N N 480 TYR CB CG sing N N 481 TYR CB HB2 sing N N 482 TYR CB HB3 sing N N 483 TYR CG CD1 doub Y N 484 TYR CG CD2 sing Y N 485 TYR CD1 CE1 sing Y N 486 TYR CD1 HD1 sing N N 487 TYR CD2 CE2 doub Y N 488 TYR CD2 HD2 sing N N 489 TYR CE1 CZ doub Y N 490 TYR CE1 HE1 sing N N 491 TYR CE2 CZ sing Y N 492 TYR CE2 HE2 sing N N 493 TYR CZ OH sing N N 494 TYR OH HH sing N N 495 TYR OXT HXT sing N N 496 VAL N CA sing N N 497 VAL N H sing N N 498 VAL N H2 sing N N 499 VAL CA C sing N N 500 VAL CA CB sing N N 501 VAL CA HA sing N N 502 VAL C O doub N N 503 VAL C OXT sing N N 504 VAL CB CG1 sing N N 505 VAL CB CG2 sing N N 506 VAL CB HB sing N N 507 VAL CG1 HG11 sing N N 508 VAL CG1 HG12 sing N N 509 VAL CG1 HG13 sing N N 510 VAL CG2 HG21 sing N N 511 VAL CG2 HG22 sing N N 512 VAL CG2 HG23 sing N N 513 VAL OXT HXT sing N N 514 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'ACETATE ION' ACT 4 water HOH #