data_3NMB # _entry.id 3NMB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NMB pdb_00003nmb 10.2210/pdb3nmb/pdb RCSB RCSB060006 ? ? WWPDB D_1000060006 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 416742 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3NMB _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-06-22 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a putative sugar hydrolase (BACOVA_03189) from Bacteroides ovatus at 2.40 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3NMB _cell.length_a 99.880 _cell.length_b 99.880 _cell.length_c 94.722 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NMB _symmetry.Int_Tables_number 96 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative sugar hydrolase' 29354.004 1 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 14 ? ? ? ? 5 water nat water 18.015 191 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GQEEPSKVALSYSKSLKAPETDSLNLPVDENGYITIFDGETFNGWRGYGKDRVPTKWTIEDGCIKFNGSGGGEAQDGDGG DLIFAHKFKNFELELEWKVAKGSNSGILYLAQEVTSKDKDGNDVLEPIYISAPEYQILDNANHPDAKLGKDNNRQSASLY D(MSE)IPAVPQNSKPFGEWNKAKI(MSE)VYKGTVVHGQNDENVLEYHLWTKQWTD(MSE)LQASKFSEDKWPLAFELL NNCGGENHEGFIGLQDHGDDVWFRNIRVKVLD ; _entity_poly.pdbx_seq_one_letter_code_can ;GQEEPSKVALSYSKSLKAPETDSLNLPVDENGYITIFDGETFNGWRGYGKDRVPTKWTIEDGCIKFNGSGGGEAQDGDGG DLIFAHKFKNFELELEWKVAKGSNSGILYLAQEVTSKDKDGNDVLEPIYISAPEYQILDNANHPDAKLGKDNNRQSASLY DMIPAVPQNSKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDMLQASKFSEDKWPLAFELLNNCGGENHEGFI GLQDHGDDVWFRNIRVKVLD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 416742 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 GLU n 1 4 GLU n 1 5 PRO n 1 6 SER n 1 7 LYS n 1 8 VAL n 1 9 ALA n 1 10 LEU n 1 11 SER n 1 12 TYR n 1 13 SER n 1 14 LYS n 1 15 SER n 1 16 LEU n 1 17 LYS n 1 18 ALA n 1 19 PRO n 1 20 GLU n 1 21 THR n 1 22 ASP n 1 23 SER n 1 24 LEU n 1 25 ASN n 1 26 LEU n 1 27 PRO n 1 28 VAL n 1 29 ASP n 1 30 GLU n 1 31 ASN n 1 32 GLY n 1 33 TYR n 1 34 ILE n 1 35 THR n 1 36 ILE n 1 37 PHE n 1 38 ASP n 1 39 GLY n 1 40 GLU n 1 41 THR n 1 42 PHE n 1 43 ASN n 1 44 GLY n 1 45 TRP n 1 46 ARG n 1 47 GLY n 1 48 TYR n 1 49 GLY n 1 50 LYS n 1 51 ASP n 1 52 ARG n 1 53 VAL n 1 54 PRO n 1 55 THR n 1 56 LYS n 1 57 TRP n 1 58 THR n 1 59 ILE n 1 60 GLU n 1 61 ASP n 1 62 GLY n 1 63 CYS n 1 64 ILE n 1 65 LYS n 1 66 PHE n 1 67 ASN n 1 68 GLY n 1 69 SER n 1 70 GLY n 1 71 GLY n 1 72 GLY n 1 73 GLU n 1 74 ALA n 1 75 GLN n 1 76 ASP n 1 77 GLY n 1 78 ASP n 1 79 GLY n 1 80 GLY n 1 81 ASP n 1 82 LEU n 1 83 ILE n 1 84 PHE n 1 85 ALA n 1 86 HIS n 1 87 LYS n 1 88 PHE n 1 89 LYS n 1 90 ASN n 1 91 PHE n 1 92 GLU n 1 93 LEU n 1 94 GLU n 1 95 LEU n 1 96 GLU n 1 97 TRP n 1 98 LYS n 1 99 VAL n 1 100 ALA n 1 101 LYS n 1 102 GLY n 1 103 SER n 1 104 ASN n 1 105 SER n 1 106 GLY n 1 107 ILE n 1 108 LEU n 1 109 TYR n 1 110 LEU n 1 111 ALA n 1 112 GLN n 1 113 GLU n 1 114 VAL n 1 115 THR n 1 116 SER n 1 117 LYS n 1 118 ASP n 1 119 LYS n 1 120 ASP n 1 121 GLY n 1 122 ASN n 1 123 ASP n 1 124 VAL n 1 125 LEU n 1 126 GLU n 1 127 PRO n 1 128 ILE n 1 129 TYR n 1 130 ILE n 1 131 SER n 1 132 ALA n 1 133 PRO n 1 134 GLU n 1 135 TYR n 1 136 GLN n 1 137 ILE n 1 138 LEU n 1 139 ASP n 1 140 ASN n 1 141 ALA n 1 142 ASN n 1 143 HIS n 1 144 PRO n 1 145 ASP n 1 146 ALA n 1 147 LYS n 1 148 LEU n 1 149 GLY n 1 150 LYS n 1 151 ASP n 1 152 ASN n 1 153 ASN n 1 154 ARG n 1 155 GLN n 1 156 SER n 1 157 ALA n 1 158 SER n 1 159 LEU n 1 160 TYR n 1 161 ASP n 1 162 MSE n 1 163 ILE n 1 164 PRO n 1 165 ALA n 1 166 VAL n 1 167 PRO n 1 168 GLN n 1 169 ASN n 1 170 SER n 1 171 LYS n 1 172 PRO n 1 173 PHE n 1 174 GLY n 1 175 GLU n 1 176 TRP n 1 177 ASN n 1 178 LYS n 1 179 ALA n 1 180 LYS n 1 181 ILE n 1 182 MSE n 1 183 VAL n 1 184 TYR n 1 185 LYS n 1 186 GLY n 1 187 THR n 1 188 VAL n 1 189 VAL n 1 190 HIS n 1 191 GLY n 1 192 GLN n 1 193 ASN n 1 194 ASP n 1 195 GLU n 1 196 ASN n 1 197 VAL n 1 198 LEU n 1 199 GLU n 1 200 TYR n 1 201 HIS n 1 202 LEU n 1 203 TRP n 1 204 THR n 1 205 LYS n 1 206 GLN n 1 207 TRP n 1 208 THR n 1 209 ASP n 1 210 MSE n 1 211 LEU n 1 212 GLN n 1 213 ALA n 1 214 SER n 1 215 LYS n 1 216 PHE n 1 217 SER n 1 218 GLU n 1 219 ASP n 1 220 LYS n 1 221 TRP n 1 222 PRO n 1 223 LEU n 1 224 ALA n 1 225 PHE n 1 226 GLU n 1 227 LEU n 1 228 LEU n 1 229 ASN n 1 230 ASN n 1 231 CYS n 1 232 GLY n 1 233 GLY n 1 234 GLU n 1 235 ASN n 1 236 HIS n 1 237 GLU n 1 238 GLY n 1 239 PHE n 1 240 ILE n 1 241 GLY n 1 242 LEU n 1 243 GLN n 1 244 ASP n 1 245 HIS n 1 246 GLY n 1 247 ASP n 1 248 ASP n 1 249 VAL n 1 250 TRP n 1 251 PHE n 1 252 ARG n 1 253 ASN n 1 254 ILE n 1 255 ARG n 1 256 VAL n 1 257 LYS n 1 258 VAL n 1 259 LEU n 1 260 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BACOVA_03189 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8483' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides ovatus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 411476 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A7LZB4_BACOV _struct_ref.pdbx_db_accession A7LZB4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QEEPSKVALSYSKSLKAPETDSLNLPVDENGYITIFDGETFNGWRGYGKDRVPTKWTIEDGCIKFNGSGGGEAQDGDGGD LIFAHKFKNFELELEWKVAKGSNSGILYLAQEVTSKDKDGNDVLEPIYISAPEYQILDNANHPDAKLGKDNNRQSASLYD MIPAVPQNSKPFGEWNKAKIMVYKGTVVHGQNDENVLEYHLWTKQWTDMLQASKFSEDKWPLAFELLNNCGGENHEGFIG LQDHGDDVWFRNIRVKVLD ; _struct_ref.pdbx_align_begin 0 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NMB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 260 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A7LZB4 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 288 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 30 _struct_ref_seq.pdbx_auth_seq_align_end 288 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3NMB _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A7LZB4 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3NMB # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.02 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 69.43 _exptl_crystal.description 'THE STATISTICS REPORTED IN REMARK 200 WERE COMPUTED WITH XSCALE WITH FRIEDEL PAIRS KEPT SEPARATE.' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 9.1 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.200M Na2HPO4, 20.00% PEG-3350, No Buffer, pH 9.1, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2010-04-07 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97931 1.0 3 0.97868 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97931,0.97868 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3NMB _reflns.d_resolution_high 2.40 _reflns.d_resolution_low 28.825 _reflns.number_obs 18955 _reflns.pdbx_Rmerge_I_obs 0.195 _reflns.pdbx_netI_over_sigmaI 6.880 _reflns.percent_possible_obs 98.100 _reflns.B_iso_Wilson_estimate 40.298 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.400 2.490 13833 ? 3524 0.979 1.5 ? ? ? ? ? 94.000 ? 1 2.490 2.580 12555 ? 3200 0.846 1.8 ? ? ? ? ? 98.500 ? 2 2.580 2.700 14339 ? 3645 0.674 2.2 ? ? ? ? ? 98.100 ? 3 2.700 2.840 13590 ? 3462 0.548 2.8 ? ? ? ? ? 98.600 ? 4 2.840 3.020 14129 ? 3598 0.419 3.6 ? ? ? ? ? 98.500 ? 5 3.020 3.250 13706 ? 3488 0.261 5.6 ? ? ? ? ? 98.300 ? 6 3.250 3.580 14249 ? 3620 0.165 8.5 ? ? ? ? ? 98.800 ? 7 3.580 4.090 13749 ? 3503 0.103 12.6 ? ? ? ? ? 98.800 ? 8 4.090 5.140 14077 ? 3579 0.086 14.6 ? ? ? ? ? 99.000 ? 9 5.140 28.825 14209 ? 3616 0.084 15.0 ? ? ? ? ? 98.200 ? 10 # _refine.entry_id 3NMB _refine.ls_d_res_high 2.4000 _refine.ls_d_res_low 28.825 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.2600 _refine.ls_number_reflns_obs 18936 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 7. POLYETHYLENE GLYCOL-3350 (PEG) FRAGMENTS AND ETHYLENE GLYCOL (EDO) FROM THE CRYSTALLIZATION/CRYOPROTECTION SOLUTION AND A SODIUM ION (NA) FROM THE PROTEIN BUFFER ARE MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1718 _refine.ls_R_factor_R_work 0.1694 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2166 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 965 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 48.7775 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.3100 _refine.aniso_B[2][2] 0.3100 _refine.aniso_B[3][3] -0.6200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9520 _refine.correlation_coeff_Fo_to_Fc_free 0.9320 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1910 _refine.overall_SU_ML 0.1420 _refine.overall_SU_B 11.1690 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 99.280 _refine.B_iso_min 34.120 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2032 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 71 _refine_hist.number_atoms_solvent 191 _refine_hist.number_atoms_total 2294 _refine_hist.d_res_high 2.4000 _refine_hist.d_res_low 28.825 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 2152 0.016 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1507 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2881 1.549 1.953 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3668 0.871 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 259 7.561 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 108 36.938 25.926 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 355 14.505 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 5 16.455 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 290 0.095 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2379 0.005 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 410 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1272 0.664 1.500 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 530 0.152 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2038 1.237 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 880 2.062 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 841 3.258 4.500 ? ? # _refine_ls_shell.d_res_high 2.4010 _refine_ls_shell.d_res_low 2.4630 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.1100 _refine_ls_shell.number_reflns_R_work 1270 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2320 _refine_ls_shell.R_factor_R_free 0.2940 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 72 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1342 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3NMB _struct.title 'Crystal structure of a putative sugar hydrolase (BACOVA_03189) from Bacteroides ovatus at 2.40 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 3NMB # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 5 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 71 ? GLN A 75 ? GLY A 99 GLN A 103 5 ? 5 HELX_P HELX_P2 2 PRO A 127 ? SER A 131 ? PRO A 155 SER A 159 5 ? 5 HELX_P HELX_P3 3 HIS A 143 ? LEU A 148 ? HIS A 171 LEU A 176 5 ? 6 HELX_P HELX_P4 4 THR A 204 ? ALA A 213 ? THR A 232 ALA A 241 1 ? 10 HELX_P HELX_P5 5 TRP A 221 ? ASN A 230 ? TRP A 249 ASN A 258 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASP 161 C ? ? ? 1_555 A MSE 162 N ? ? A ASP 189 A MSE 190 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A MSE 162 C ? ? ? 1_555 A ILE 163 N ? ? A MSE 190 A ILE 191 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A ILE 181 C ? ? ? 1_555 A MSE 182 N ? ? A ILE 209 A MSE 210 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A MSE 182 C ? ? ? 1_555 A VAL 183 N ? ? A MSE 210 A VAL 211 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale5 covale both ? A ASP 209 C ? ? ? 1_555 A MSE 210 N ? ? A ASP 237 A MSE 238 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale6 covale both ? A MSE 210 C ? ? ? 1_555 A LEU 211 N ? ? A MSE 238 A LEU 239 1_555 ? ? ? ? ? ? ? 1.326 ? ? metalc1 metalc ? ? B NA . NA ? ? ? 1_555 A ASN 104 OD1 ? ? A NA 1 A ASN 132 1_555 ? ? ? ? ? ? ? 2.461 ? ? metalc2 metalc ? ? B NA . NA ? ? ? 1_555 A SER 105 O ? ? A NA 1 A SER 133 1_555 ? ? ? ? ? ? ? 2.203 ? ? metalc3 metalc ? ? B NA . NA ? ? ? 1_555 A GLU 134 OE2 ? ? A NA 1 A GLU 162 1_555 ? ? ? ? ? ? ? 2.540 ? ? metalc4 metalc ? ? B NA . NA ? ? ? 1_555 A GLN 136 OE1 ? ? A NA 1 A GLN 164 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc5 metalc ? ? B NA . NA ? ? ? 1_555 A GLN 243 OE1 ? ? A NA 1 A GLN 271 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc6 metalc ? ? B NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 1 A HOH 307 1_555 ? ? ? ? ? ? ? 2.362 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 166 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 194 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 167 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 195 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.84 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 6 ? D ? 5 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 7 ? TYR A 12 ? LYS A 35 TYR A 40 A 2 ASP A 22 ? PRO A 27 ? ASP A 50 PRO A 55 B 1 TYR A 33 ? THR A 35 ? TYR A 61 THR A 63 B 2 VAL A 249 ? VAL A 258 ? VAL A 277 VAL A 286 B 3 CYS A 63 ? PHE A 66 ? CYS A 91 PHE A 94 B 4 TRP A 57 ? GLU A 60 ? TRP A 85 GLU A 88 C 1 TYR A 33 ? THR A 35 ? TYR A 61 THR A 63 C 2 VAL A 249 ? VAL A 258 ? VAL A 277 VAL A 286 C 3 PHE A 91 ? VAL A 99 ? PHE A 119 VAL A 127 C 4 ASN A 177 ? TYR A 184 ? ASN A 205 TYR A 212 C 5 THR A 187 ? GLN A 192 ? THR A 215 GLN A 220 C 6 GLU A 195 ? HIS A 201 ? GLU A 223 HIS A 229 D 1 TRP A 45 ? GLY A 47 ? TRP A 73 GLY A 75 D 2 LEU A 82 ? PHE A 88 ? LEU A 110 PHE A 116 D 3 GLY A 238 ? LEU A 242 ? GLY A 266 LEU A 270 D 4 ASN A 104 ? ALA A 111 ? ASN A 132 ALA A 139 D 5 GLU A 134 ? LEU A 138 ? GLU A 162 LEU A 166 E 1 THR A 115 ? LYS A 117 ? THR A 143 LYS A 145 E 2 ASP A 123 ? LEU A 125 ? ASP A 151 LEU A 153 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 10 ? N LEU A 38 O LEU A 24 ? O LEU A 52 B 1 2 N ILE A 34 ? N ILE A 62 O VAL A 256 ? O VAL A 284 B 2 3 O VAL A 249 ? O VAL A 277 N PHE A 66 ? N PHE A 94 B 3 4 O LYS A 65 ? O LYS A 93 N THR A 58 ? N THR A 86 C 1 2 N ILE A 34 ? N ILE A 62 O VAL A 256 ? O VAL A 284 C 2 3 O TRP A 250 ? O TRP A 278 N LYS A 98 ? N LYS A 126 C 3 4 N LEU A 95 ? N LEU A 123 O ALA A 179 ? O ALA A 207 C 4 5 N LYS A 180 ? N LYS A 208 O GLY A 191 ? O GLY A 219 C 5 6 N VAL A 188 ? N VAL A 216 O TYR A 200 ? O TYR A 228 D 1 2 N ARG A 46 ? N ARG A 74 O ILE A 83 ? O ILE A 111 D 2 3 N LEU A 82 ? N LEU A 110 O LEU A 242 ? O LEU A 270 D 3 4 O GLY A 241 ? O GLY A 269 N LEU A 108 ? N LEU A 136 D 4 5 N ILE A 107 ? N ILE A 135 O TYR A 135 ? O TYR A 163 E 1 2 N SER A 116 ? N SER A 144 O VAL A 124 ? O VAL A 152 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 1 ? 6 'BINDING SITE FOR RESIDUE NA A 1' AC2 Software A PEG 2 ? 9 'BINDING SITE FOR RESIDUE PEG A 2' AC3 Software A PEG 3 ? 3 'BINDING SITE FOR RESIDUE PEG A 3' AC4 Software A EDO 4 ? 5 'BINDING SITE FOR RESIDUE EDO A 4' AC5 Software A EDO 5 ? 7 'BINDING SITE FOR RESIDUE EDO A 5' AC6 Software A EDO 6 ? 4 'BINDING SITE FOR RESIDUE EDO A 6' AC7 Software A EDO 7 ? 4 'BINDING SITE FOR RESIDUE EDO A 7' AC8 Software A EDO 8 ? 2 'BINDING SITE FOR RESIDUE EDO A 8' AC9 Software A EDO 9 ? 3 'BINDING SITE FOR RESIDUE EDO A 9' BC1 Software A EDO 10 ? 7 'BINDING SITE FOR RESIDUE EDO A 10' BC2 Software A EDO 11 ? 5 'BINDING SITE FOR RESIDUE EDO A 11' BC3 Software A EDO 12 ? 5 'BINDING SITE FOR RESIDUE EDO A 12' BC4 Software A EDO 13 ? 7 'BINDING SITE FOR RESIDUE EDO A 13' BC5 Software A EDO 14 ? 4 'BINDING SITE FOR RESIDUE EDO A 14' BC6 Software A EDO 15 ? 3 'BINDING SITE FOR RESIDUE EDO A 15' BC7 Software A EDO 16 ? 1 'BINDING SITE FOR RESIDUE EDO A 16' BC8 Software A EDO 17 ? 3 'BINDING SITE FOR RESIDUE EDO A 17' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASN A 104 ? ASN A 132 . ? 1_555 ? 2 AC1 6 SER A 105 ? SER A 133 . ? 1_555 ? 3 AC1 6 GLU A 134 ? GLU A 162 . ? 1_555 ? 4 AC1 6 GLN A 136 ? GLN A 164 . ? 1_555 ? 5 AC1 6 GLN A 243 ? GLN A 271 . ? 1_555 ? 6 AC1 6 HOH S . ? HOH A 307 . ? 1_555 ? 7 AC2 9 LYS A 178 ? LYS A 206 . ? 1_555 ? 8 AC2 9 LYS A 180 ? LYS A 208 . ? 1_555 ? 9 AC2 9 GLY A 191 ? GLY A 219 . ? 1_555 ? 10 AC2 9 GLN A 192 ? GLN A 220 . ? 1_555 ? 11 AC2 9 ASN A 193 ? ASN A 221 . ? 1_555 ? 12 AC2 9 ASP A 194 ? ASP A 222 . ? 1_555 ? 13 AC2 9 GLU A 195 ? GLU A 223 . ? 1_555 ? 14 AC2 9 ASN A 196 ? ASN A 224 . ? 1_555 ? 15 AC2 9 HOH S . ? HOH A 444 . ? 1_555 ? 16 AC3 3 LYS A 98 ? LYS A 126 . ? 1_555 ? 17 AC3 3 TRP A 176 ? TRP A 204 . ? 1_555 ? 18 AC3 3 ARG A 252 ? ARG A 280 . ? 1_555 ? 19 AC4 5 SER A 69 ? SER A 97 . ? 1_555 ? 20 AC4 5 ASP A 76 ? ASP A 104 . ? 1_555 ? 21 AC4 5 TRP A 203 ? TRP A 231 . ? 4_455 ? 22 AC4 5 HIS A 236 ? HIS A 264 . ? 4_455 ? 23 AC4 5 HOH S . ? HOH A 447 . ? 4_455 ? 24 AC5 7 GLU A 73 ? GLU A 101 . ? 3_554 ? 25 AC5 7 ALA A 74 ? ALA A 102 . ? 3_554 ? 26 AC5 7 TRP A 203 ? TRP A 231 . ? 1_555 ? 27 AC5 7 THR A 204 ? THR A 232 . ? 1_555 ? 28 AC5 7 LYS A 205 ? LYS A 233 . ? 1_555 ? 29 AC5 7 GLN A 206 ? GLN A 234 . ? 1_555 ? 30 AC5 7 HOH S . ? HOH A 442 . ? 1_555 ? 31 AC6 4 THR A 41 ? THR A 69 . ? 7_556 ? 32 AC6 4 ASN A 43 ? ASN A 71 . ? 7_556 ? 33 AC6 4 ASP A 51 ? ASP A 79 . ? 1_555 ? 34 AC6 4 ARG A 52 ? ARG A 80 . ? 1_555 ? 35 AC7 4 PRO A 27 ? PRO A 55 . ? 1_555 ? 36 AC7 4 THR A 35 ? THR A 63 . ? 1_555 ? 37 AC7 4 ASP A 38 ? ASP A 66 . ? 1_555 ? 38 AC7 4 HOH S . ? HOH A 431 . ? 1_555 ? 39 AC8 2 GLU A 199 ? GLU A 227 . ? 1_555 ? 40 AC8 2 HOH S . ? HOH A 342 . ? 3_554 ? 41 AC9 3 HIS A 86 ? HIS A 114 . ? 1_555 ? 42 AC9 3 PHE A 88 ? PHE A 116 . ? 1_555 ? 43 AC9 3 VAL A 258 ? VAL A 286 . ? 1_555 ? 44 BC1 7 GLY A 68 ? GLY A 96 . ? 1_555 ? 45 BC1 7 GLY A 70 ? GLY A 98 . ? 1_555 ? 46 BC1 7 SER A 103 ? SER A 131 . ? 1_555 ? 47 BC1 7 GLY A 246 ? GLY A 274 . ? 1_555 ? 48 BC1 7 ASP A 247 ? ASP A 275 . ? 1_555 ? 49 BC1 7 ASP A 248 ? ASP A 276 . ? 1_555 ? 50 BC1 7 HOH S . ? HOH A 397 . ? 1_555 ? 51 BC2 5 GLU A 73 ? GLU A 101 . ? 1_555 ? 52 BC2 5 TYR A 129 ? TYR A 157 . ? 1_555 ? 53 BC2 5 THR A 204 ? THR A 232 . ? 4_455 ? 54 BC2 5 GLN A 206 ? GLN A 234 . ? 4_455 ? 55 BC2 5 LYS A 215 ? LYS A 243 . ? 1_555 ? 56 BC3 5 EDO O . ? EDO A 14 . ? 1_555 ? 57 BC3 5 GLU A 92 ? GLU A 120 . ? 1_555 ? 58 BC3 5 LYS A 180 ? LYS A 208 . ? 1_555 ? 59 BC3 5 MSE A 182 ? MSE A 210 . ? 1_555 ? 60 BC3 5 ASN A 196 ? ASN A 224 . ? 1_555 ? 61 BC4 7 TYR A 129 ? TYR A 157 . ? 1_555 ? 62 BC4 7 GLU A 134 ? GLU A 162 . ? 1_555 ? 63 BC4 7 TYR A 160 ? TYR A 188 . ? 1_555 ? 64 BC4 7 LYS A 215 ? LYS A 243 . ? 1_555 ? 65 BC4 7 GLN A 243 ? GLN A 271 . ? 1_555 ? 66 BC4 7 HOH S . ? HOH A 307 . ? 1_555 ? 67 BC4 7 HOH S . ? HOH A 328 . ? 1_555 ? 68 BC5 4 EDO M . ? EDO A 12 . ? 1_555 ? 69 BC5 4 GLU A 92 ? GLU A 120 . ? 1_555 ? 70 BC5 4 LYS A 147 ? LYS A 175 . ? 3_554 ? 71 BC5 4 LYS A 257 ? LYS A 285 . ? 1_555 ? 72 BC6 3 LYS A 17 ? LYS A 45 . ? 1_555 ? 73 BC6 3 HOH S . ? HOH A 383 . ? 1_555 ? 74 BC6 3 HOH S . ? HOH A 461 . ? 1_555 ? 75 BC7 1 GLN A 206 ? GLN A 234 . ? 4_455 ? 76 BC8 3 LYS A 17 ? LYS A 45 . ? 1_555 ? 77 BC8 3 THR A 115 ? THR A 143 . ? 1_555 ? 78 BC8 3 ASP A 123 ? ASP A 151 . ? 1_555 ? # _atom_sites.entry_id 3NMB _atom_sites.fract_transf_matrix[1][1] 0.010012 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010012 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010557 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 GLN 2 30 ? ? ? A . n A 1 3 GLU 3 31 ? ? ? A . n A 1 4 GLU 4 32 ? ? ? A . n A 1 5 PRO 5 33 33 PRO PRO A . n A 1 6 SER 6 34 34 SER SER A . n A 1 7 LYS 7 35 35 LYS LYS A . n A 1 8 VAL 8 36 36 VAL VAL A . n A 1 9 ALA 9 37 37 ALA ALA A . n A 1 10 LEU 10 38 38 LEU LEU A . n A 1 11 SER 11 39 39 SER SER A . n A 1 12 TYR 12 40 40 TYR TYR A . n A 1 13 SER 13 41 41 SER SER A . n A 1 14 LYS 14 42 42 LYS LYS A . n A 1 15 SER 15 43 43 SER SER A . n A 1 16 LEU 16 44 44 LEU LEU A . n A 1 17 LYS 17 45 45 LYS LYS A . n A 1 18 ALA 18 46 46 ALA ALA A . n A 1 19 PRO 19 47 47 PRO PRO A . n A 1 20 GLU 20 48 48 GLU GLU A . n A 1 21 THR 21 49 49 THR THR A . n A 1 22 ASP 22 50 50 ASP ASP A . n A 1 23 SER 23 51 51 SER SER A . n A 1 24 LEU 24 52 52 LEU LEU A . n A 1 25 ASN 25 53 53 ASN ASN A . n A 1 26 LEU 26 54 54 LEU LEU A . n A 1 27 PRO 27 55 55 PRO PRO A . n A 1 28 VAL 28 56 56 VAL VAL A . n A 1 29 ASP 29 57 57 ASP ASP A . n A 1 30 GLU 30 58 58 GLU GLU A . n A 1 31 ASN 31 59 59 ASN ASN A . n A 1 32 GLY 32 60 60 GLY GLY A . n A 1 33 TYR 33 61 61 TYR TYR A . n A 1 34 ILE 34 62 62 ILE ILE A . n A 1 35 THR 35 63 63 THR THR A . n A 1 36 ILE 36 64 64 ILE ILE A . n A 1 37 PHE 37 65 65 PHE PHE A . n A 1 38 ASP 38 66 66 ASP ASP A . n A 1 39 GLY 39 67 67 GLY GLY A . n A 1 40 GLU 40 68 68 GLU GLU A . n A 1 41 THR 41 69 69 THR THR A . n A 1 42 PHE 42 70 70 PHE PHE A . n A 1 43 ASN 43 71 71 ASN ASN A . n A 1 44 GLY 44 72 72 GLY GLY A . n A 1 45 TRP 45 73 73 TRP TRP A . n A 1 46 ARG 46 74 74 ARG ARG A . n A 1 47 GLY 47 75 75 GLY GLY A . n A 1 48 TYR 48 76 76 TYR TYR A . n A 1 49 GLY 49 77 77 GLY GLY A . n A 1 50 LYS 50 78 78 LYS LYS A . n A 1 51 ASP 51 79 79 ASP ASP A . n A 1 52 ARG 52 80 80 ARG ARG A . n A 1 53 VAL 53 81 81 VAL VAL A . n A 1 54 PRO 54 82 82 PRO PRO A . n A 1 55 THR 55 83 83 THR THR A . n A 1 56 LYS 56 84 84 LYS LYS A . n A 1 57 TRP 57 85 85 TRP TRP A . n A 1 58 THR 58 86 86 THR THR A . n A 1 59 ILE 59 87 87 ILE ILE A . n A 1 60 GLU 60 88 88 GLU GLU A . n A 1 61 ASP 61 89 89 ASP ASP A . n A 1 62 GLY 62 90 90 GLY GLY A . n A 1 63 CYS 63 91 91 CYS CYS A . n A 1 64 ILE 64 92 92 ILE ILE A . n A 1 65 LYS 65 93 93 LYS LYS A . n A 1 66 PHE 66 94 94 PHE PHE A . n A 1 67 ASN 67 95 95 ASN ASN A . n A 1 68 GLY 68 96 96 GLY GLY A . n A 1 69 SER 69 97 97 SER SER A . n A 1 70 GLY 70 98 98 GLY GLY A . n A 1 71 GLY 71 99 99 GLY GLY A . n A 1 72 GLY 72 100 100 GLY GLY A . n A 1 73 GLU 73 101 101 GLU GLU A . n A 1 74 ALA 74 102 102 ALA ALA A . n A 1 75 GLN 75 103 103 GLN GLN A . n A 1 76 ASP 76 104 104 ASP ASP A . n A 1 77 GLY 77 105 105 GLY GLY A . n A 1 78 ASP 78 106 106 ASP ASP A . n A 1 79 GLY 79 107 107 GLY GLY A . n A 1 80 GLY 80 108 108 GLY GLY A . n A 1 81 ASP 81 109 109 ASP ASP A . n A 1 82 LEU 82 110 110 LEU LEU A . n A 1 83 ILE 83 111 111 ILE ILE A . n A 1 84 PHE 84 112 112 PHE PHE A . n A 1 85 ALA 85 113 113 ALA ALA A . n A 1 86 HIS 86 114 114 HIS HIS A . n A 1 87 LYS 87 115 115 LYS LYS A . n A 1 88 PHE 88 116 116 PHE PHE A . n A 1 89 LYS 89 117 117 LYS LYS A . n A 1 90 ASN 90 118 118 ASN ASN A . n A 1 91 PHE 91 119 119 PHE PHE A . n A 1 92 GLU 92 120 120 GLU GLU A . n A 1 93 LEU 93 121 121 LEU LEU A . n A 1 94 GLU 94 122 122 GLU GLU A . n A 1 95 LEU 95 123 123 LEU LEU A . n A 1 96 GLU 96 124 124 GLU GLU A . n A 1 97 TRP 97 125 125 TRP TRP A . n A 1 98 LYS 98 126 126 LYS LYS A . n A 1 99 VAL 99 127 127 VAL VAL A . n A 1 100 ALA 100 128 128 ALA ALA A . n A 1 101 LYS 101 129 129 LYS LYS A . n A 1 102 GLY 102 130 130 GLY GLY A . n A 1 103 SER 103 131 131 SER SER A . n A 1 104 ASN 104 132 132 ASN ASN A . n A 1 105 SER 105 133 133 SER SER A . n A 1 106 GLY 106 134 134 GLY GLY A . n A 1 107 ILE 107 135 135 ILE ILE A . n A 1 108 LEU 108 136 136 LEU LEU A . n A 1 109 TYR 109 137 137 TYR TYR A . n A 1 110 LEU 110 138 138 LEU LEU A . n A 1 111 ALA 111 139 139 ALA ALA A . n A 1 112 GLN 112 140 140 GLN GLN A . n A 1 113 GLU 113 141 141 GLU GLU A . n A 1 114 VAL 114 142 142 VAL VAL A . n A 1 115 THR 115 143 143 THR THR A . n A 1 116 SER 116 144 144 SER SER A . n A 1 117 LYS 117 145 145 LYS LYS A . n A 1 118 ASP 118 146 146 ASP ASP A . n A 1 119 LYS 119 147 147 LYS LYS A . n A 1 120 ASP 120 148 148 ASP ASP A . n A 1 121 GLY 121 149 149 GLY GLY A . n A 1 122 ASN 122 150 150 ASN ASN A . n A 1 123 ASP 123 151 151 ASP ASP A . n A 1 124 VAL 124 152 152 VAL VAL A . n A 1 125 LEU 125 153 153 LEU LEU A . n A 1 126 GLU 126 154 154 GLU GLU A . n A 1 127 PRO 127 155 155 PRO PRO A . n A 1 128 ILE 128 156 156 ILE ILE A . n A 1 129 TYR 129 157 157 TYR TYR A . n A 1 130 ILE 130 158 158 ILE ILE A . n A 1 131 SER 131 159 159 SER SER A . n A 1 132 ALA 132 160 160 ALA ALA A . n A 1 133 PRO 133 161 161 PRO PRO A . n A 1 134 GLU 134 162 162 GLU GLU A . n A 1 135 TYR 135 163 163 TYR TYR A . n A 1 136 GLN 136 164 164 GLN GLN A . n A 1 137 ILE 137 165 165 ILE ILE A . n A 1 138 LEU 138 166 166 LEU LEU A . n A 1 139 ASP 139 167 167 ASP ASP A . n A 1 140 ASN 140 168 168 ASN ASN A . n A 1 141 ALA 141 169 169 ALA ALA A . n A 1 142 ASN 142 170 170 ASN ASN A . n A 1 143 HIS 143 171 171 HIS HIS A . n A 1 144 PRO 144 172 172 PRO PRO A . n A 1 145 ASP 145 173 173 ASP ASP A . n A 1 146 ALA 146 174 174 ALA ALA A . n A 1 147 LYS 147 175 175 LYS LYS A . n A 1 148 LEU 148 176 176 LEU LEU A . n A 1 149 GLY 149 177 177 GLY GLY A . n A 1 150 LYS 150 178 178 LYS LYS A . n A 1 151 ASP 151 179 179 ASP ASP A . n A 1 152 ASN 152 180 180 ASN ASN A . n A 1 153 ASN 153 181 181 ASN ASN A . n A 1 154 ARG 154 182 182 ARG ARG A . n A 1 155 GLN 155 183 183 GLN GLN A . n A 1 156 SER 156 184 184 SER SER A . n A 1 157 ALA 157 185 185 ALA ALA A . n A 1 158 SER 158 186 186 SER SER A . n A 1 159 LEU 159 187 187 LEU LEU A . n A 1 160 TYR 160 188 188 TYR TYR A . n A 1 161 ASP 161 189 189 ASP ASP A . n A 1 162 MSE 162 190 190 MSE MSE A . n A 1 163 ILE 163 191 191 ILE ILE A . n A 1 164 PRO 164 192 192 PRO PRO A . n A 1 165 ALA 165 193 193 ALA ALA A . n A 1 166 VAL 166 194 194 VAL VAL A . n A 1 167 PRO 167 195 195 PRO PRO A . n A 1 168 GLN 168 196 196 GLN GLN A . n A 1 169 ASN 169 197 197 ASN ASN A . n A 1 170 SER 170 198 198 SER SER A . n A 1 171 LYS 171 199 199 LYS LYS A . n A 1 172 PRO 172 200 200 PRO PRO A . n A 1 173 PHE 173 201 201 PHE PHE A . n A 1 174 GLY 174 202 202 GLY GLY A . n A 1 175 GLU 175 203 203 GLU GLU A . n A 1 176 TRP 176 204 204 TRP TRP A . n A 1 177 ASN 177 205 205 ASN ASN A . n A 1 178 LYS 178 206 206 LYS LYS A . n A 1 179 ALA 179 207 207 ALA ALA A . n A 1 180 LYS 180 208 208 LYS LYS A . n A 1 181 ILE 181 209 209 ILE ILE A . n A 1 182 MSE 182 210 210 MSE MSE A . n A 1 183 VAL 183 211 211 VAL VAL A . n A 1 184 TYR 184 212 212 TYR TYR A . n A 1 185 LYS 185 213 213 LYS LYS A . n A 1 186 GLY 186 214 214 GLY GLY A . n A 1 187 THR 187 215 215 THR THR A . n A 1 188 VAL 188 216 216 VAL VAL A . n A 1 189 VAL 189 217 217 VAL VAL A . n A 1 190 HIS 190 218 218 HIS HIS A . n A 1 191 GLY 191 219 219 GLY GLY A . n A 1 192 GLN 192 220 220 GLN GLN A . n A 1 193 ASN 193 221 221 ASN ASN A . n A 1 194 ASP 194 222 222 ASP ASP A . n A 1 195 GLU 195 223 223 GLU GLU A . n A 1 196 ASN 196 224 224 ASN ASN A . n A 1 197 VAL 197 225 225 VAL VAL A . n A 1 198 LEU 198 226 226 LEU LEU A . n A 1 199 GLU 199 227 227 GLU GLU A . n A 1 200 TYR 200 228 228 TYR TYR A . n A 1 201 HIS 201 229 229 HIS HIS A . n A 1 202 LEU 202 230 230 LEU LEU A . n A 1 203 TRP 203 231 231 TRP TRP A . n A 1 204 THR 204 232 232 THR THR A . n A 1 205 LYS 205 233 233 LYS LYS A . n A 1 206 GLN 206 234 234 GLN GLN A . n A 1 207 TRP 207 235 235 TRP TRP A . n A 1 208 THR 208 236 236 THR THR A . n A 1 209 ASP 209 237 237 ASP ASP A . n A 1 210 MSE 210 238 238 MSE MSE A . n A 1 211 LEU 211 239 239 LEU LEU A . n A 1 212 GLN 212 240 240 GLN GLN A . n A 1 213 ALA 213 241 241 ALA ALA A . n A 1 214 SER 214 242 242 SER SER A . n A 1 215 LYS 215 243 243 LYS LYS A . n A 1 216 PHE 216 244 244 PHE PHE A . n A 1 217 SER 217 245 245 SER SER A . n A 1 218 GLU 218 246 246 GLU GLU A . n A 1 219 ASP 219 247 247 ASP ASP A . n A 1 220 LYS 220 248 248 LYS LYS A . n A 1 221 TRP 221 249 249 TRP TRP A . n A 1 222 PRO 222 250 250 PRO PRO A . n A 1 223 LEU 223 251 251 LEU LEU A . n A 1 224 ALA 224 252 252 ALA ALA A . n A 1 225 PHE 225 253 253 PHE PHE A . n A 1 226 GLU 226 254 254 GLU GLU A . n A 1 227 LEU 227 255 255 LEU LEU A . n A 1 228 LEU 228 256 256 LEU LEU A . n A 1 229 ASN 229 257 257 ASN ASN A . n A 1 230 ASN 230 258 258 ASN ASN A . n A 1 231 CYS 231 259 259 CYS CYS A . n A 1 232 GLY 232 260 260 GLY GLY A . n A 1 233 GLY 233 261 261 GLY GLY A . n A 1 234 GLU 234 262 262 GLU GLU A . n A 1 235 ASN 235 263 263 ASN ASN A . n A 1 236 HIS 236 264 264 HIS HIS A . n A 1 237 GLU 237 265 265 GLU GLU A . n A 1 238 GLY 238 266 266 GLY GLY A . n A 1 239 PHE 239 267 267 PHE PHE A . n A 1 240 ILE 240 268 268 ILE ILE A . n A 1 241 GLY 241 269 269 GLY GLY A . n A 1 242 LEU 242 270 270 LEU LEU A . n A 1 243 GLN 243 271 271 GLN GLN A . n A 1 244 ASP 244 272 272 ASP ASP A . n A 1 245 HIS 245 273 273 HIS HIS A . n A 1 246 GLY 246 274 274 GLY GLY A . n A 1 247 ASP 247 275 275 ASP ASP A . n A 1 248 ASP 248 276 276 ASP ASP A . n A 1 249 VAL 249 277 277 VAL VAL A . n A 1 250 TRP 250 278 278 TRP TRP A . n A 1 251 PHE 251 279 279 PHE PHE A . n A 1 252 ARG 252 280 280 ARG ARG A . n A 1 253 ASN 253 281 281 ASN ASN A . n A 1 254 ILE 254 282 282 ILE ILE A . n A 1 255 ARG 255 283 283 ARG ARG A . n A 1 256 VAL 256 284 284 VAL VAL A . n A 1 257 LYS 257 285 285 LYS LYS A . n A 1 258 VAL 258 286 286 VAL VAL A . n A 1 259 LEU 259 287 287 LEU LEU A . n A 1 260 ASP 260 288 288 ASP ASP A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 1 1 NA NA A . C 3 PEG 1 2 2 PEG PEG A . D 3 PEG 1 3 3 PEG PEG A . E 4 EDO 1 4 4 EDO EDO A . F 4 EDO 1 5 5 EDO EDO A . G 4 EDO 1 6 6 EDO EDO A . H 4 EDO 1 7 7 EDO EDO A . I 4 EDO 1 8 8 EDO EDO A . J 4 EDO 1 9 9 EDO EDO A . K 4 EDO 1 10 10 EDO EDO A . L 4 EDO 1 11 11 EDO EDO A . M 4 EDO 1 12 12 EDO EDO A . N 4 EDO 1 13 13 EDO EDO A . O 4 EDO 1 14 14 EDO EDO A . P 4 EDO 1 15 15 EDO EDO A . Q 4 EDO 1 16 16 EDO EDO A . R 4 EDO 1 17 17 EDO EDO A . S 5 HOH 1 18 18 HOH HOH A . S 5 HOH 2 19 19 HOH HOH A . S 5 HOH 3 20 20 HOH HOH A . S 5 HOH 4 21 21 HOH HOH A . S 5 HOH 5 22 22 HOH HOH A . S 5 HOH 6 23 23 HOH HOH A . S 5 HOH 7 24 24 HOH HOH A . S 5 HOH 8 25 25 HOH HOH A . S 5 HOH 9 26 26 HOH HOH A . S 5 HOH 10 27 27 HOH HOH A . S 5 HOH 11 28 28 HOH HOH A . S 5 HOH 12 289 29 HOH HOH A . S 5 HOH 13 290 30 HOH HOH A . S 5 HOH 14 291 31 HOH HOH A . S 5 HOH 15 292 32 HOH HOH A . S 5 HOH 16 293 33 HOH HOH A . S 5 HOH 17 294 34 HOH HOH A . S 5 HOH 18 295 35 HOH HOH A . S 5 HOH 19 296 36 HOH HOH A . S 5 HOH 20 297 37 HOH HOH A . S 5 HOH 21 298 38 HOH HOH A . S 5 HOH 22 299 39 HOH HOH A . S 5 HOH 23 300 40 HOH HOH A . S 5 HOH 24 301 41 HOH HOH A . S 5 HOH 25 302 42 HOH HOH A . S 5 HOH 26 303 43 HOH HOH A . S 5 HOH 27 304 44 HOH HOH A . S 5 HOH 28 305 45 HOH HOH A . S 5 HOH 29 306 46 HOH HOH A . S 5 HOH 30 307 47 HOH HOH A . S 5 HOH 31 308 48 HOH HOH A . S 5 HOH 32 309 49 HOH HOH A . S 5 HOH 33 310 50 HOH HOH A . S 5 HOH 34 311 51 HOH HOH A . S 5 HOH 35 312 52 HOH HOH A . S 5 HOH 36 313 53 HOH HOH A . S 5 HOH 37 314 54 HOH HOH A . S 5 HOH 38 315 55 HOH HOH A . S 5 HOH 39 316 56 HOH HOH A . S 5 HOH 40 317 57 HOH HOH A . S 5 HOH 41 318 58 HOH HOH A . S 5 HOH 42 319 59 HOH HOH A . S 5 HOH 43 320 60 HOH HOH A . S 5 HOH 44 321 61 HOH HOH A . S 5 HOH 45 322 62 HOH HOH A . S 5 HOH 46 323 63 HOH HOH A . S 5 HOH 47 324 64 HOH HOH A . S 5 HOH 48 325 65 HOH HOH A . S 5 HOH 49 326 66 HOH HOH A . S 5 HOH 50 327 67 HOH HOH A . S 5 HOH 51 328 68 HOH HOH A . S 5 HOH 52 329 69 HOH HOH A . S 5 HOH 53 330 70 HOH HOH A . S 5 HOH 54 331 71 HOH HOH A . S 5 HOH 55 332 72 HOH HOH A . S 5 HOH 56 333 73 HOH HOH A . S 5 HOH 57 334 74 HOH HOH A . S 5 HOH 58 335 75 HOH HOH A . S 5 HOH 59 336 76 HOH HOH A . S 5 HOH 60 337 77 HOH HOH A . S 5 HOH 61 338 78 HOH HOH A . S 5 HOH 62 339 79 HOH HOH A . S 5 HOH 63 340 80 HOH HOH A . S 5 HOH 64 341 81 HOH HOH A . S 5 HOH 65 342 82 HOH HOH A . S 5 HOH 66 343 83 HOH HOH A . S 5 HOH 67 344 84 HOH HOH A . S 5 HOH 68 345 85 HOH HOH A . S 5 HOH 69 346 86 HOH HOH A . S 5 HOH 70 347 87 HOH HOH A . S 5 HOH 71 348 88 HOH HOH A . S 5 HOH 72 349 89 HOH HOH A . S 5 HOH 73 350 90 HOH HOH A . S 5 HOH 74 351 91 HOH HOH A . S 5 HOH 75 352 92 HOH HOH A . S 5 HOH 76 353 93 HOH HOH A . S 5 HOH 77 354 94 HOH HOH A . S 5 HOH 78 355 95 HOH HOH A . S 5 HOH 79 356 96 HOH HOH A . S 5 HOH 80 357 97 HOH HOH A . S 5 HOH 81 358 98 HOH HOH A . S 5 HOH 82 359 99 HOH HOH A . S 5 HOH 83 360 100 HOH HOH A . S 5 HOH 84 361 101 HOH HOH A . S 5 HOH 85 362 102 HOH HOH A . S 5 HOH 86 363 103 HOH HOH A . S 5 HOH 87 364 104 HOH HOH A . S 5 HOH 88 365 105 HOH HOH A . S 5 HOH 89 366 106 HOH HOH A . S 5 HOH 90 367 107 HOH HOH A . S 5 HOH 91 368 108 HOH HOH A . S 5 HOH 92 369 109 HOH HOH A . S 5 HOH 93 370 110 HOH HOH A . S 5 HOH 94 371 111 HOH HOH A . S 5 HOH 95 372 112 HOH HOH A . S 5 HOH 96 373 113 HOH HOH A . S 5 HOH 97 374 114 HOH HOH A . S 5 HOH 98 375 115 HOH HOH A . S 5 HOH 99 376 116 HOH HOH A . S 5 HOH 100 377 117 HOH HOH A . S 5 HOH 101 378 118 HOH HOH A . S 5 HOH 102 379 119 HOH HOH A . S 5 HOH 103 380 120 HOH HOH A . S 5 HOH 104 381 121 HOH HOH A . S 5 HOH 105 382 122 HOH HOH A . S 5 HOH 106 383 123 HOH HOH A . S 5 HOH 107 384 124 HOH HOH A . S 5 HOH 108 385 125 HOH HOH A . S 5 HOH 109 386 126 HOH HOH A . S 5 HOH 110 387 127 HOH HOH A . S 5 HOH 111 388 128 HOH HOH A . S 5 HOH 112 389 129 HOH HOH A . S 5 HOH 113 390 130 HOH HOH A . S 5 HOH 114 391 131 HOH HOH A . S 5 HOH 115 392 132 HOH HOH A . S 5 HOH 116 393 133 HOH HOH A . S 5 HOH 117 394 134 HOH HOH A . S 5 HOH 118 395 135 HOH HOH A . S 5 HOH 119 396 136 HOH HOH A . S 5 HOH 120 397 137 HOH HOH A . S 5 HOH 121 398 138 HOH HOH A . S 5 HOH 122 399 139 HOH HOH A . S 5 HOH 123 400 140 HOH HOH A . S 5 HOH 124 401 141 HOH HOH A . S 5 HOH 125 402 142 HOH HOH A . S 5 HOH 126 403 143 HOH HOH A . S 5 HOH 127 404 144 HOH HOH A . S 5 HOH 128 405 145 HOH HOH A . S 5 HOH 129 406 146 HOH HOH A . S 5 HOH 130 407 147 HOH HOH A . S 5 HOH 131 408 148 HOH HOH A . S 5 HOH 132 409 149 HOH HOH A . S 5 HOH 133 410 150 HOH HOH A . S 5 HOH 134 411 151 HOH HOH A . S 5 HOH 135 412 152 HOH HOH A . S 5 HOH 136 413 153 HOH HOH A . S 5 HOH 137 414 154 HOH HOH A . S 5 HOH 138 415 155 HOH HOH A . S 5 HOH 139 416 156 HOH HOH A . S 5 HOH 140 417 157 HOH HOH A . S 5 HOH 141 418 158 HOH HOH A . S 5 HOH 142 419 159 HOH HOH A . S 5 HOH 143 420 160 HOH HOH A . S 5 HOH 144 421 161 HOH HOH A . S 5 HOH 145 422 162 HOH HOH A . S 5 HOH 146 423 163 HOH HOH A . S 5 HOH 147 424 164 HOH HOH A . S 5 HOH 148 425 165 HOH HOH A . S 5 HOH 149 426 166 HOH HOH A . S 5 HOH 150 427 167 HOH HOH A . S 5 HOH 151 428 168 HOH HOH A . S 5 HOH 152 429 169 HOH HOH A . S 5 HOH 153 430 170 HOH HOH A . S 5 HOH 154 431 171 HOH HOH A . S 5 HOH 155 432 172 HOH HOH A . S 5 HOH 156 433 173 HOH HOH A . S 5 HOH 157 434 174 HOH HOH A . S 5 HOH 158 435 175 HOH HOH A . S 5 HOH 159 436 176 HOH HOH A . S 5 HOH 160 437 177 HOH HOH A . S 5 HOH 161 438 178 HOH HOH A . S 5 HOH 162 439 179 HOH HOH A . S 5 HOH 163 440 180 HOH HOH A . S 5 HOH 164 441 181 HOH HOH A . S 5 HOH 165 442 182 HOH HOH A . S 5 HOH 166 443 183 HOH HOH A . S 5 HOH 167 444 184 HOH HOH A . S 5 HOH 168 445 185 HOH HOH A . S 5 HOH 169 446 186 HOH HOH A . S 5 HOH 170 447 187 HOH HOH A . S 5 HOH 171 448 188 HOH HOH A . S 5 HOH 172 449 189 HOH HOH A . S 5 HOH 173 450 190 HOH HOH A . S 5 HOH 174 451 191 HOH HOH A . S 5 HOH 175 452 192 HOH HOH A . S 5 HOH 176 453 193 HOH HOH A . S 5 HOH 177 454 194 HOH HOH A . S 5 HOH 178 455 195 HOH HOH A . S 5 HOH 179 456 196 HOH HOH A . S 5 HOH 180 457 197 HOH HOH A . S 5 HOH 181 458 198 HOH HOH A . S 5 HOH 182 459 199 HOH HOH A . S 5 HOH 183 460 200 HOH HOH A . S 5 HOH 184 461 201 HOH HOH A . S 5 HOH 185 462 202 HOH HOH A . S 5 HOH 186 463 203 HOH HOH A . S 5 HOH 187 464 204 HOH HOH A . S 5 HOH 188 465 205 HOH HOH A . S 5 HOH 189 466 206 HOH HOH A . S 5 HOH 190 467 207 HOH HOH A . S 5 HOH 191 468 208 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 162 A MSE 190 ? MET SELENOMETHIONINE 2 A MSE 182 A MSE 210 ? MET SELENOMETHIONINE 3 A MSE 210 A MSE 238 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 365 ? S HOH . 2 1 A HOH 423 ? S HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 104 ? A ASN 132 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 O ? A SER 105 ? A SER 133 ? 1_555 81.2 ? 2 OD1 ? A ASN 104 ? A ASN 132 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE2 ? A GLU 134 ? A GLU 162 ? 1_555 167.5 ? 3 O ? A SER 105 ? A SER 133 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE2 ? A GLU 134 ? A GLU 162 ? 1_555 111.1 ? 4 OD1 ? A ASN 104 ? A ASN 132 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE1 ? A GLN 136 ? A GLN 164 ? 1_555 87.6 ? 5 O ? A SER 105 ? A SER 133 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE1 ? A GLN 136 ? A GLN 164 ? 1_555 84.3 ? 6 OE2 ? A GLU 134 ? A GLU 162 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE1 ? A GLN 136 ? A GLN 164 ? 1_555 91.2 ? 7 OD1 ? A ASN 104 ? A ASN 132 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE1 ? A GLN 243 ? A GLN 271 ? 1_555 99.5 ? 8 O ? A SER 105 ? A SER 133 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE1 ? A GLN 243 ? A GLN 271 ? 1_555 82.4 ? 9 OE2 ? A GLU 134 ? A GLU 162 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE1 ? A GLN 243 ? A GLN 271 ? 1_555 84.9 ? 10 OE1 ? A GLN 136 ? A GLN 164 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 OE1 ? A GLN 243 ? A GLN 271 ? 1_555 163.8 ? 11 OD1 ? A ASN 104 ? A ASN 132 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 O ? S HOH . ? A HOH 307 ? 1_555 92.1 ? 12 O ? A SER 105 ? A SER 133 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 O ? S HOH . ? A HOH 307 ? 1_555 168.4 ? 13 OE2 ? A GLU 134 ? A GLU 162 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 O ? S HOH . ? A HOH 307 ? 1_555 75.4 ? 14 OE1 ? A GLN 136 ? A GLN 164 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 O ? S HOH . ? A HOH 307 ? 1_555 86.0 ? 15 OE1 ? A GLN 243 ? A GLN 271 ? 1_555 NA ? B NA . ? A NA 1 ? 1_555 O ? S HOH . ? A HOH 307 ? 1_555 108.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-18 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_struct_conn_angle 3 3 'Structure model' struct_conn 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 3 'Structure model' '_struct_ref_seq_dif.details' 31 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 17.9520 _pdbx_refine_tls.origin_y 41.6730 _pdbx_refine_tls.origin_z 36.9280 _pdbx_refine_tls.T[1][1] 0.0065 _pdbx_refine_tls.T[2][2] 0.0021 _pdbx_refine_tls.T[3][3] 0.0062 _pdbx_refine_tls.T[1][2] 0.0028 _pdbx_refine_tls.T[1][3] 0.0039 _pdbx_refine_tls.T[2][3] 0.0019 _pdbx_refine_tls.L[1][1] 1.3460 _pdbx_refine_tls.L[2][2] 1.4861 _pdbx_refine_tls.L[3][3] 1.3163 _pdbx_refine_tls.L[1][2] -0.1946 _pdbx_refine_tls.L[1][3] 0.2252 _pdbx_refine_tls.L[2][3] -0.4898 _pdbx_refine_tls.S[1][1] 0.0104 _pdbx_refine_tls.S[2][2] 0.0004 _pdbx_refine_tls.S[3][3] -0.0109 _pdbx_refine_tls.S[1][2] 0.0236 _pdbx_refine_tls.S[1][3] 0.0541 _pdbx_refine_tls.S[2][3] -0.0604 _pdbx_refine_tls.S[2][1] -0.0007 _pdbx_refine_tls.S[3][1] -0.0429 _pdbx_refine_tls.S[3][2] 0.0063 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 33 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 288 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.5.0102 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 autoSHARP . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3NMB _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT (RESIDUES 30-288) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 45 ? ? 53.23 10.80 2 1 ALA A 113 ? ? -78.38 47.58 3 1 LYS A 117 ? ? -121.67 -77.15 4 1 SER A 133 ? ? -150.61 -156.65 5 1 ALA A 185 ? ? 74.50 -3.67 6 1 TRP A 249 ? ? -156.01 73.47 7 1 ASN A 258 ? ? -112.51 55.91 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A GLN 30 ? A GLN 2 3 1 Y 1 A GLU 31 ? A GLU 3 4 1 Y 1 A GLU 32 ? A GLU 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'DI(HYDROXYETHYL)ETHER' PEG 4 1,2-ETHANEDIOL EDO 5 water HOH #