HEADER HYDROLASE 07-JUL-10 3NUM TITLE SUBSTRATE INDUCED REMODELING OF THE ACTIVE SITE REGULATES HTRA1 TITLE 2 ACTIVITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE PROTEASE HTRA1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PROTEASE AND PDZ DOMAIN (UNP RESIDUE 158-480); COMPND 5 SYNONYM: L56, SERINE PROTEASE 11; COMPND 6 EC: 3.4.21.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HTRA1, HTRA, PRSS11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21D KEYWDS SERINE PROTEASE, DEGP, HTRA, PROTEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.TRUEBESTEIN,A.TENNSTAEDT,P.HAUSKE,T.KROJER,M.KAISER,T.CLAUSEN, AUTHOR 2 M.EHRMANN REVDAT 3 06-SEP-23 3NUM 1 SEQADV REVDAT 2 30-MAR-11 3NUM 1 JRNL REVDAT 1 23-FEB-11 3NUM 0 JRNL AUTH L.TRUEBESTEIN,A.TENNSTAEDT,T.MONIG,T.KROJER,F.CANELLAS, JRNL AUTH 2 M.KAISER,T.CLAUSEN,M.EHRMANN JRNL TITL SUBSTRATE-INDUCED REMODELING OF THE ACTIVE SITE REGULATES JRNL TITL 2 HUMAN HTRA1 ACTIVITY. JRNL REF NAT.STRUCT.MOL.BIOL. V. 18 386 2011 JRNL REFN ISSN 1545-9993 JRNL PMID 21297635 JRNL DOI 10.1038/NSMB.2013 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 12062 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 628 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 787 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1407 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 93.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.09000 REMARK 3 B12 (A**2) : 0.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.321 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.278 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.212 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.494 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1428 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 915 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1942 ; 1.477 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2267 ; 0.898 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 187 ; 6.984 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 53 ;27.972 ;25.472 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 233 ;17.999 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;22.658 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 241 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1580 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 256 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 940 ; 0.570 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 386 ; 0.103 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1517 ; 1.059 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 488 ; 1.436 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 425 ; 2.457 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 161 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 10.7415 -3.2475 12.6201 REMARK 3 T TENSOR REMARK 3 T11: 0.3990 T22: 0.5447 REMARK 3 T33: 0.2938 T12: 0.1273 REMARK 3 T13: -0.0635 T23: 0.1123 REMARK 3 L TENSOR REMARK 3 L11: 3.1182 L22: 10.2647 REMARK 3 L33: 3.0828 L12: -2.3706 REMARK 3 L13: 0.2620 L23: 2.0510 REMARK 3 S TENSOR REMARK 3 S11: -0.6521 S12: -0.8878 S13: -0.1726 REMARK 3 S21: 1.5423 S22: 0.2498 S23: -0.0352 REMARK 3 S31: 0.2779 S32: 0.6447 S33: 0.4023 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 186 A 263 REMARK 3 ORIGIN FOR THE GROUP (A): 19.9009 -22.6656 -6.8014 REMARK 3 T TENSOR REMARK 3 T11: 0.5278 T22: 0.4623 REMARK 3 T33: 0.5242 T12: 0.3750 REMARK 3 T13: 0.1086 T23: -0.0741 REMARK 3 L TENSOR REMARK 3 L11: 3.4325 L22: 1.2484 REMARK 3 L33: 6.7098 L12: -0.5279 REMARK 3 L13: -3.1545 L23: 0.5769 REMARK 3 S TENSOR REMARK 3 S11: -0.1367 S12: 0.2347 S13: -0.5786 REMARK 3 S21: 0.1070 S22: -0.0112 S23: -0.3172 REMARK 3 S31: 0.9328 S32: 1.0806 S33: 0.1479 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 264 A 278 REMARK 3 ORIGIN FOR THE GROUP (A): -0.7718 -16.0681 8.6306 REMARK 3 T TENSOR REMARK 3 T11: 0.6361 T22: 0.3665 REMARK 3 T33: 0.4453 T12: -0.1050 REMARK 3 T13: 0.0973 T23: 0.1518 REMARK 3 L TENSOR REMARK 3 L11: 12.9651 L22: 3.1259 REMARK 3 L33: 3.3866 L12: -6.3916 REMARK 3 L13: -3.0258 L23: 2.5054 REMARK 3 S TENSOR REMARK 3 S11: -0.7730 S12: -0.7071 S13: -1.3389 REMARK 3 S21: 0.7115 S22: 0.0243 S23: 0.7316 REMARK 3 S31: 1.0282 S32: -0.3891 S33: 0.7488 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 279 A 355 REMARK 3 ORIGIN FOR THE GROUP (A): 3.1060 -11.9147 -1.4972 REMARK 3 T TENSOR REMARK 3 T11: 0.2366 T22: 0.0648 REMARK 3 T33: 0.2388 T12: 0.0476 REMARK 3 T13: 0.0632 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.3272 L22: 5.1637 REMARK 3 L33: 7.1152 L12: -1.5449 REMARK 3 L13: -0.3257 L23: -1.3683 REMARK 3 S TENSOR REMARK 3 S11: -0.0215 S12: 0.1940 S13: -0.3303 REMARK 3 S21: -0.3780 S22: -0.1609 S23: -0.2389 REMARK 3 S31: 0.4741 S32: -0.0179 S33: 0.1824 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 356 A 369 REMARK 3 ORIGIN FOR THE GROUP (A): 4.1926 -29.8285 1.1717 REMARK 3 T TENSOR REMARK 3 T11: 0.8035 T22: 0.3511 REMARK 3 T33: 0.9507 T12: 0.0591 REMARK 3 T13: 0.1002 T23: 0.2382 REMARK 3 L TENSOR REMARK 3 L11: 4.9320 L22: 10.6267 REMARK 3 L33: 14.6621 L12: -1.0360 REMARK 3 L13: 1.2596 L23: 7.8824 REMARK 3 S TENSOR REMARK 3 S11: -0.4508 S12: -1.0163 S13: -1.8136 REMARK 3 S21: 0.4201 S22: 1.0350 S23: 1.0813 REMARK 3 S31: 1.8183 S32: 0.2698 S33: -0.5842 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3NUM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060298. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.08090 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12716 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.39500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1LCY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M LISO4, 0.1M SODIUM CITRATE PH5.6, REMARK 280 0.5M (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.73800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.60300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.98533 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 54.73800 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 31.60300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.98533 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 54.73800 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 31.60300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.98533 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.20600 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 75.97067 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 63.20600 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 75.97067 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 63.20600 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 75.97067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 157 REMARK 465 GLY A 158 REMARK 465 GLN A 159 REMARK 465 GLU A 160 REMARK 465 PRO A 285 REMARK 465 PHE A 286 REMARK 465 SER A 287 REMARK 465 LEU A 288 REMARK 465 GLN A 289 REMARK 465 GLN A 301 REMARK 465 ARG A 302 REMARK 465 GLY A 303 REMARK 465 GLY A 304 REMARK 465 LYS A 305 REMARK 465 GLU A 306 REMARK 465 LEU A 307 REMARK 465 GLY A 308 REMARK 465 LEU A 309 REMARK 465 ARG A 310 REMARK 465 ASN A 311 REMARK 465 SER A 312 REMARK 465 ASP A 313 REMARK 465 MET A 314 REMARK 465 ARG A 370 REMARK 465 GLN A 371 REMARK 465 ALA A 372 REMARK 465 LYS A 373 REMARK 465 GLY A 374 REMARK 465 LYS A 375 REMARK 465 ALA A 376 REMARK 465 ILE A 377 REMARK 465 THR A 378 REMARK 465 LYS A 379 REMARK 465 LYS A 380 REMARK 465 LYS A 381 REMARK 465 TYR A 382 REMARK 465 ILE A 383 REMARK 465 GLY A 384 REMARK 465 ILE A 385 REMARK 465 ARG A 386 REMARK 465 MET A 387 REMARK 465 MET A 388 REMARK 465 SER A 389 REMARK 465 LEU A 390 REMARK 465 THR A 391 REMARK 465 SER A 392 REMARK 465 SER A 393 REMARK 465 LYS A 394 REMARK 465 ALA A 395 REMARK 465 LYS A 396 REMARK 465 GLU A 397 REMARK 465 LEU A 398 REMARK 465 LYS A 399 REMARK 465 ASP A 400 REMARK 465 ARG A 401 REMARK 465 HIS A 402 REMARK 465 ARG A 403 REMARK 465 ASP A 404 REMARK 465 PHE A 405 REMARK 465 PRO A 406 REMARK 465 ASP A 407 REMARK 465 VAL A 408 REMARK 465 ILE A 409 REMARK 465 SER A 410 REMARK 465 GLY A 411 REMARK 465 ALA A 412 REMARK 465 TYR A 413 REMARK 465 ILE A 414 REMARK 465 ILE A 415 REMARK 465 GLU A 416 REMARK 465 VAL A 417 REMARK 465 ILE A 418 REMARK 465 PRO A 419 REMARK 465 ASP A 420 REMARK 465 THR A 421 REMARK 465 PRO A 422 REMARK 465 ALA A 423 REMARK 465 GLU A 424 REMARK 465 ALA A 425 REMARK 465 GLY A 426 REMARK 465 GLY A 427 REMARK 465 LEU A 428 REMARK 465 LYS A 429 REMARK 465 GLU A 430 REMARK 465 ASN A 431 REMARK 465 ASP A 432 REMARK 465 VAL A 433 REMARK 465 ILE A 434 REMARK 465 ILE A 435 REMARK 465 SER A 436 REMARK 465 ILE A 437 REMARK 465 ASN A 438 REMARK 465 GLY A 439 REMARK 465 GLN A 440 REMARK 465 SER A 441 REMARK 465 VAL A 442 REMARK 465 VAL A 443 REMARK 465 SER A 444 REMARK 465 ALA A 445 REMARK 465 ASN A 446 REMARK 465 ASP A 447 REMARK 465 VAL A 448 REMARK 465 SER A 449 REMARK 465 ASP A 450 REMARK 465 VAL A 451 REMARK 465 ILE A 452 REMARK 465 LYS A 453 REMARK 465 ARG A 454 REMARK 465 GLU A 455 REMARK 465 SER A 456 REMARK 465 THR A 457 REMARK 465 LEU A 458 REMARK 465 ASN A 459 REMARK 465 MET A 460 REMARK 465 VAL A 461 REMARK 465 VAL A 462 REMARK 465 ARG A 463 REMARK 465 ARG A 464 REMARK 465 GLY A 465 REMARK 465 ASN A 466 REMARK 465 GLU A 467 REMARK 465 ASP A 468 REMARK 465 ILE A 469 REMARK 465 MET A 470 REMARK 465 ILE A 471 REMARK 465 THR A 472 REMARK 465 VAL A 473 REMARK 465 ILE A 474 REMARK 465 PRO A 475 REMARK 465 GLU A 476 REMARK 465 GLU A 477 REMARK 465 ILE A 478 REMARK 465 ASP A 479 REMARK 465 PRO A 480 REMARK 465 LEU A 481 REMARK 465 GLU A 482 REMARK 465 HIS A 483 REMARK 465 HIS A 484 REMARK 465 HIS A 485 REMARK 465 HIS A 486 REMARK 465 HIS A 487 REMARK 465 HIS A 488 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 161 CG OD1 OD2 REMARK 470 ARG A 190 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 225 CG CD CE NZ REMARK 470 HIS A 226 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 GLU A 247 CG CD OE1 OE2 REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 ARG A 269 CG CD NE CZ NH1 NH2 REMARK 470 THR A 300 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 193 C - N - CA ANGL. DEV. = 10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 193 -47.16 -28.04 REMARK 500 PHE A 194 32.91 -141.38 REMARK 500 LYS A 225 -77.86 -45.96 REMARK 500 HIS A 226 -157.42 -78.69 REMARK 500 LYS A 233 -48.34 -22.38 REMARK 500 ASP A 244 143.42 -174.07 REMARK 500 ASP A 320 -35.93 -16.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NWU RELATED DB: PDB DBREF 3NUM A 158 480 UNP Q92743 HTRA1_HUMAN 158 480 SEQADV 3NUM MET A 157 UNP Q92743 INITIATING METHIONINE SEQADV 3NUM ALA A 328 UNP Q92743 SER 328 ENGINEERED MUTATION SEQADV 3NUM LEU A 481 UNP Q92743 EXPRESSION TAG SEQADV 3NUM GLU A 482 UNP Q92743 EXPRESSION TAG SEQADV 3NUM HIS A 483 UNP Q92743 EXPRESSION TAG SEQADV 3NUM HIS A 484 UNP Q92743 EXPRESSION TAG SEQADV 3NUM HIS A 485 UNP Q92743 EXPRESSION TAG SEQADV 3NUM HIS A 486 UNP Q92743 EXPRESSION TAG SEQADV 3NUM HIS A 487 UNP Q92743 EXPRESSION TAG SEQADV 3NUM HIS A 488 UNP Q92743 EXPRESSION TAG SEQRES 1 A 332 MET GLY GLN GLU ASP PRO ASN SER LEU ARG HIS LYS TYR SEQRES 2 A 332 ASN PHE ILE ALA ASP VAL VAL GLU LYS ILE ALA PRO ALA SEQRES 3 A 332 VAL VAL HIS ILE GLU LEU PHE ARG LYS LEU PRO PHE SER SEQRES 4 A 332 LYS ARG GLU VAL PRO VAL ALA SER GLY SER GLY PHE ILE SEQRES 5 A 332 VAL SER GLU ASP GLY LEU ILE VAL THR ASN ALA HIS VAL SEQRES 6 A 332 VAL THR ASN LYS HIS ARG VAL LYS VAL GLU LEU LYS ASN SEQRES 7 A 332 GLY ALA THR TYR GLU ALA LYS ILE LYS ASP VAL ASP GLU SEQRES 8 A 332 LYS ALA ASP ILE ALA LEU ILE LYS ILE ASP HIS GLN GLY SEQRES 9 A 332 LYS LEU PRO VAL LEU LEU LEU GLY ARG SER SER GLU LEU SEQRES 10 A 332 ARG PRO GLY GLU PHE VAL VAL ALA ILE GLY SER PRO PHE SEQRES 11 A 332 SER LEU GLN ASN THR VAL THR THR GLY ILE VAL SER THR SEQRES 12 A 332 THR GLN ARG GLY GLY LYS GLU LEU GLY LEU ARG ASN SER SEQRES 13 A 332 ASP MET ASP TYR ILE GLN THR ASP ALA ILE ILE ASN TYR SEQRES 14 A 332 GLY ASN ALA GLY GLY PRO LEU VAL ASN LEU ASP GLY GLU SEQRES 15 A 332 VAL ILE GLY ILE ASN THR LEU LYS VAL THR ALA GLY ILE SEQRES 16 A 332 SER PHE ALA ILE PRO SER ASP LYS ILE LYS LYS PHE LEU SEQRES 17 A 332 THR GLU SER HIS ASP ARG GLN ALA LYS GLY LYS ALA ILE SEQRES 18 A 332 THR LYS LYS LYS TYR ILE GLY ILE ARG MET MET SER LEU SEQRES 19 A 332 THR SER SER LYS ALA LYS GLU LEU LYS ASP ARG HIS ARG SEQRES 20 A 332 ASP PHE PRO ASP VAL ILE SER GLY ALA TYR ILE ILE GLU SEQRES 21 A 332 VAL ILE PRO ASP THR PRO ALA GLU ALA GLY GLY LEU LYS SEQRES 22 A 332 GLU ASN ASP VAL ILE ILE SER ILE ASN GLY GLN SER VAL SEQRES 23 A 332 VAL SER ALA ASN ASP VAL SER ASP VAL ILE LYS ARG GLU SEQRES 24 A 332 SER THR LEU ASN MET VAL VAL ARG ARG GLY ASN GLU ASP SEQRES 25 A 332 ILE MET ILE THR VAL ILE PRO GLU GLU ILE ASP PRO LEU SEQRES 26 A 332 GLU HIS HIS HIS HIS HIS HIS HELIX 1 1 SER A 164 ASN A 170 1 7 HELIX 2 2 ASN A 170 ALA A 180 1 11 HELIX 3 3 SER A 357 HIS A 368 1 12 SHEET 1 A 7 VAL A 183 LYS A 191 0 SHEET 2 A 7 GLU A 198 SER A 210 -1 O ALA A 202 N LEU A 188 SHEET 3 A 7 LEU A 214 THR A 217 -1 O VAL A 216 N PHE A 207 SHEET 4 A 7 ILE A 251 LYS A 255 -1 O ILE A 254 N ILE A 215 SHEET 5 A 7 THR A 237 ASP A 246 -1 N ASP A 244 O LEU A 253 SHEET 6 A 7 ARG A 227 LEU A 232 -1 N VAL A 230 O TYR A 238 SHEET 7 A 7 VAL A 183 LYS A 191 -1 N PHE A 189 O ARG A 227 SHEET 1 B 7 PHE A 278 ILE A 282 0 SHEET 2 B 7 VAL A 292 THR A 299 -1 O THR A 293 N ALA A 281 SHEET 3 B 7 ILE A 317 THR A 319 -1 O GLN A 318 N SER A 298 SHEET 4 B 7 ILE A 351 PRO A 356 -1 O SER A 352 N THR A 319 SHEET 5 B 7 VAL A 339 THR A 348 -1 N THR A 348 O ILE A 351 SHEET 6 B 7 PRO A 331 ASN A 334 -1 N LEU A 332 O ILE A 340 SHEET 7 B 7 PHE A 278 ILE A 282 -1 N VAL A 280 O VAL A 333 CRYST1 109.476 109.476 113.956 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009134 0.005274 0.000000 0.00000 SCALE2 0.000000 0.010548 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008775 0.00000