data_3NZL # _entry.id 3NZL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3NZL RCSB RCSB060477 WWPDB D_1000060477 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id HR4435B _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3NZL _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Forouhar, F.' 1 'Abashidze, M.' 2 'Seetharaman, J.' 3 'Kuzin, A.P.' 4 'Patel, P.' 5 'Xiao, R.' 6 'Ciccosanti, C.' 7 'Shastry, R.' 8 'Everett, J.K.' 9 'Nair, R.' 10 'Acton, T.B.' 11 'Rost, B.' 12 'Montelione, G.T.' 13 'Hunt, J.F.' 14 'Tong, L.' 15 'Northeast Structural Genomics Consortium (NESG)' 16 # _citation.id primary _citation.title ;Crystal Structure of the N-terminal domain of DNA-binding protein SATB1 from Homo sapiens, Northeast Structural Genomics Consortium Target HR4435B (CASP Target) ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Forouhar, F.' 1 ? primary 'Abashidze, M.' 2 ? primary 'Seetharaman, J.' 3 ? primary 'Kuzin, A.P.' 4 ? primary 'Patel, P.' 5 ? primary 'Xiao, R.' 6 ? primary 'Ciccosanti, C.' 7 ? primary 'Shastry, R.' 8 ? primary 'Everett, J.K.' 9 ? primary 'Nair, R.' 10 ? primary 'Acton, T.B.' 11 ? primary 'Rost, B.' 12 ? primary 'Montelione, G.T.' 13 ? primary 'Hunt, J.F.' 14 ? primary 'Tong, L.' 15 ? # _cell.entry_id 3NZL _cell.length_a 33.926 _cell.length_b 43.480 _cell.length_c 42.461 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NZL _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding protein SATB1' 9980.498 1 ? ? 'Sequence database residues 179-250' ? 2 water nat water 18.015 146 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Special AT-rich sequence-binding protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GHHHHHHSH(MSE)LPPEQWSHTTVRNALKDLLKD(MSE)NQSSLAKECPLSQS(MSE)ISSIVNSTYYANVSAA KCQEFGRWYKHFKKTKD(MSE)(MSE) ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHHHHHHSHMLPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTK DMM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier HR4435B # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 SER n 1 10 HIS n 1 11 MSE n 1 12 LEU n 1 13 PRO n 1 14 PRO n 1 15 GLU n 1 16 GLN n 1 17 TRP n 1 18 SER n 1 19 HIS n 1 20 THR n 1 21 THR n 1 22 VAL n 1 23 ARG n 1 24 ASN n 1 25 ALA n 1 26 LEU n 1 27 LYS n 1 28 ASP n 1 29 LEU n 1 30 LEU n 1 31 LYS n 1 32 ASP n 1 33 MSE n 1 34 ASN n 1 35 GLN n 1 36 SER n 1 37 SER n 1 38 LEU n 1 39 ALA n 1 40 LYS n 1 41 GLU n 1 42 CYS n 1 43 PRO n 1 44 LEU n 1 45 SER n 1 46 GLN n 1 47 SER n 1 48 MSE n 1 49 ILE n 1 50 SER n 1 51 SER n 1 52 ILE n 1 53 VAL n 1 54 ASN n 1 55 SER n 1 56 THR n 1 57 TYR n 1 58 TYR n 1 59 ALA n 1 60 ASN n 1 61 VAL n 1 62 SER n 1 63 ALA n 1 64 ALA n 1 65 LYS n 1 66 CYS n 1 67 GLN n 1 68 GLU n 1 69 PHE n 1 70 GLY n 1 71 ARG n 1 72 TRP n 1 73 TYR n 1 74 LYS n 1 75 HIS n 1 76 PHE n 1 77 LYS n 1 78 LYS n 1 79 THR n 1 80 LYS n 1 81 ASP n 1 82 MSE n 1 83 MSE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SATB1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+ Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET 14-15C' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SATB1_HUMAN _struct_ref.pdbx_db_accession Q01826 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code LPPEQWSHTTVRNALKDLLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTKDMM _struct_ref.pdbx_align_begin 179 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NZL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 12 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 83 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q01826 _struct_ref_seq.db_align_beg 179 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 12 _struct_ref_seq.pdbx_auth_seq_align_end 83 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NZL MSE A 1 ? UNP Q01826 ? ? 'EXPRESSION TAG' 1 1 1 3NZL GLY A 2 ? UNP Q01826 ? ? 'EXPRESSION TAG' 2 2 1 3NZL HIS A 3 ? UNP Q01826 ? ? 'EXPRESSION TAG' 3 3 1 3NZL HIS A 4 ? UNP Q01826 ? ? 'EXPRESSION TAG' 4 4 1 3NZL HIS A 5 ? UNP Q01826 ? ? 'EXPRESSION TAG' 5 5 1 3NZL HIS A 6 ? UNP Q01826 ? ? 'EXPRESSION TAG' 6 6 1 3NZL HIS A 7 ? UNP Q01826 ? ? 'EXPRESSION TAG' 7 7 1 3NZL HIS A 8 ? UNP Q01826 ? ? 'EXPRESSION TAG' 8 8 1 3NZL SER A 9 ? UNP Q01826 ? ? 'EXPRESSION TAG' 9 9 1 3NZL HIS A 10 ? UNP Q01826 ? ? 'EXPRESSION TAG' 10 10 1 3NZL MSE A 11 ? UNP Q01826 ? ? 'EXPRESSION TAG' 11 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3NZL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.57 _exptl_crystal.density_percent_sol 21.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;Protein solution: 100mM NaCl, 5mM DTT, 0.02% NaN3, 10mM Tris-HCl (pH 7.5), Reservoir solution: 0.1M Tris (pH 7.5) and 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2010-06-30 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97908 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength 0.97908 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3NZL _reflns.observed_criterion_sigma_I 4.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 1.199 _reflns.number_obs 23439 _reflns.number_all ? _reflns.percent_possible_obs 78.3 _reflns.pdbx_Rmerge_I_obs 0.03700 _reflns.pdbx_Rsym_value 0.03800 _reflns.pdbx_netI_over_sigmaI 35.5000 _reflns.B_iso_Wilson_estimate 8.04 _reflns.pdbx_redundancy 4.500 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.199 _reflns_shell.d_res_low 1.35 _reflns_shell.percent_possible_all 59.7 _reflns_shell.Rmerge_I_obs 0.07600 _reflns_shell.pdbx_Rsym_value 0.09000 _reflns_shell.meanI_over_sigI_obs 14.700 _reflns_shell.pdbx_redundancy 3.50 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3NZL _refine.ls_number_reflns_obs 19319 _refine.ls_number_reflns_all 29858 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.631 _refine.ls_d_res_high 1.199 _refine.ls_percent_reflns_obs 94.39 _refine.ls_R_factor_obs 0.1505 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1477 _refine.ls_R_factor_R_free 0.1770 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.89 _refine.ls_number_reflns_R_free 3552 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.2735 _refine.aniso_B[2][2] 0.0991 _refine.aniso_B[3][3] -0.3727 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.600 _refine.solvent_model_param_bsol 60.311 _refine.pdbx_solvent_vdw_probe_radii 0.40 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.17 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.09 _refine.pdbx_overall_phase_error 14.00 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3NZL _refine_analyze.Luzzati_coordinate_error_obs 0.13 _refine_analyze.Luzzati_sigma_a_obs -0.06 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.14 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 591 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 146 _refine_hist.number_atoms_total 737 _refine_hist.d_res_high 1.199 _refine_hist.d_res_low 22.631 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? 607 'X-RAY DIFFRACTION' ? f_angle_d 1.219 ? ? 819 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 11.258 ? ? 223 'X-RAY DIFFRACTION' ? f_chiral_restr 0.070 ? ? 87 'X-RAY DIFFRACTION' ? f_plane_restr 0.010 ? ? 102 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.1992 1.2157 1270 0.1383 92.00 0.1700 . . 146 . . . . 'X-RAY DIFFRACTION' . 1.2157 1.2330 1217 0.1525 90.00 0.2057 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.2330 1.2514 1307 0.1437 94.00 0.1720 . . 151 . . . . 'X-RAY DIFFRACTION' . 1.2514 1.2710 1233 0.1438 92.00 0.2560 . . 121 . . . . 'X-RAY DIFFRACTION' . 1.2710 1.2918 1299 0.1383 93.00 0.1622 . . 135 . . . . 'X-RAY DIFFRACTION' . 1.2918 1.3141 1264 0.1455 92.00 0.1873 . . 145 . . . . 'X-RAY DIFFRACTION' . 1.3141 1.3380 1310 0.1299 97.00 0.1871 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.3380 1.3637 1326 0.1280 95.00 0.1533 . . 153 . . . . 'X-RAY DIFFRACTION' . 1.3637 1.3915 1284 0.1251 96.00 0.1389 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.3915 1.4218 1351 0.1293 97.00 0.1652 . . 156 . . . . 'X-RAY DIFFRACTION' . 1.4218 1.4549 1317 0.1189 96.00 0.1514 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.4549 1.4912 1305 0.1289 96.00 0.1605 . . 151 . . . . 'X-RAY DIFFRACTION' . 1.4912 1.5316 1332 0.1313 97.00 0.1532 . . 133 . . . . 'X-RAY DIFFRACTION' . 1.5316 1.5766 1335 0.1155 97.00 0.1500 . . 152 . . . . 'X-RAY DIFFRACTION' . 1.5766 1.6275 1332 0.1233 98.00 0.1732 . . 154 . . . . 'X-RAY DIFFRACTION' . 1.6275 1.6856 1336 0.1270 98.00 0.1528 . . 151 . . . . 'X-RAY DIFFRACTION' . 1.6856 1.7531 1342 0.1342 98.00 0.1694 . . 154 . . . . 'X-RAY DIFFRACTION' . 1.7531 1.8329 1346 0.1401 98.00 0.1547 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.8329 1.9294 1316 0.1479 98.00 0.1874 . . 149 . . . . 'X-RAY DIFFRACTION' . 1.9294 2.0503 1315 0.1358 96.00 0.1596 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.0503 2.2084 1327 0.1331 97.00 0.1710 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.2084 2.4304 1294 0.1582 94.00 0.2164 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.4304 2.7816 1313 0.1582 95.00 0.1638 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.7816 3.5024 1263 0.1607 92.00 0.1960 . . 137 . . . . 'X-RAY DIFFRACTION' . 3.5024 22.6354 1024 0.2091 75.00 0.1993 . . 118 . . . . # _struct.entry_id 3NZL _struct.title ;Crystal Structure of the N-terminal domain of DNA-binding protein SATB1 from Homo sapiens, Northeast Structural Genomics Consortium Target HR4435B ; _struct.pdbx_descriptor 'DNA-binding protein SATB1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NZL _struct_keywords.text ;alpha-helical domain, Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, TRANSCRIPTION ; _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 7 ? MSE A 11 ? HIS A 7 MSE A 11 5 ? 5 HELX_P HELX_P2 2 PRO A 13 ? TRP A 17 ? PRO A 13 TRP A 17 5 ? 5 HELX_P HELX_P3 3 SER A 18 ? LEU A 30 ? SER A 18 LEU A 30 1 ? 13 HELX_P HELX_P4 4 ASN A 34 ? CYS A 42 ? ASN A 34 CYS A 42 1 ? 9 HELX_P HELX_P5 5 SER A 45 ? SER A 55 ? SER A 45 SER A 55 1 ? 11 HELX_P HELX_P6 6 SER A 62 ? THR A 79 ? SER A 62 THR A 79 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A HIS 10 C ? ? ? 1_555 A MSE 11 N ? ? A HIS 10 A MSE 11 1_555 ? ? ? ? ? ? ? 1.323 ? covale2 covale both ? A MSE 11 C ? ? ? 1_555 A LEU 12 N ? ? A MSE 11 A LEU 12 1_555 ? ? ? ? ? ? ? 1.322 ? covale3 covale both ? A ASP 32 C ? ? ? 1_555 A MSE 33 N ? ? A ASP 32 A MSE 33 1_555 ? ? ? ? ? ? ? 1.316 ? covale4 covale both ? A MSE 33 C ? ? ? 1_555 A ASN 34 N ? ? A MSE 33 A ASN 34 1_555 ? ? ? ? ? ? ? 1.319 ? covale5 covale both ? A SER 47 C ? ? ? 1_555 A MSE 48 N ? ? A SER 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.325 ? covale6 covale both ? A MSE 48 C ? ? ? 1_555 A ILE 49 N ? ? A MSE 48 A ILE 49 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 3NZL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3NZL _atom_sites.fract_transf_matrix[1][1] 0.029476 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022999 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023551 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 GLY 2 2 ? ? ? A . n A 1 3 HIS 3 3 ? ? ? A . n A 1 4 HIS 4 4 ? ? ? A . n A 1 5 HIS 5 5 ? ? ? A . n A 1 6 HIS 6 6 ? ? ? A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 HIS 10 10 10 HIS HIS A . n A 1 11 MSE 11 11 11 MSE MSE A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 TRP 17 17 17 TRP TRP A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 MSE 33 33 33 MSE MSE A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 MSE 48 48 48 MSE MSE A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 TRP 72 72 72 TRP TRP A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 LYS 80 80 ? ? ? A . n A 1 81 ASP 81 81 ? ? ? A . n A 1 82 MSE 82 82 ? ? ? A . n A 1 83 MSE 83 83 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 84 84 HOH HOH A . B 2 HOH 2 85 85 HOH HOH A . B 2 HOH 3 86 86 HOH HOH A . B 2 HOH 4 87 87 HOH HOH A . B 2 HOH 5 88 88 HOH HOH A . B 2 HOH 6 89 89 HOH HOH A . B 2 HOH 7 90 90 HOH HOH A . B 2 HOH 8 91 91 HOH HOH A . B 2 HOH 9 92 92 HOH HOH A . B 2 HOH 10 93 93 HOH HOH A . B 2 HOH 11 94 94 HOH HOH A . B 2 HOH 12 95 95 HOH HOH A . B 2 HOH 13 96 96 HOH HOH A . B 2 HOH 14 97 97 HOH HOH A . B 2 HOH 15 98 98 HOH HOH A . B 2 HOH 16 99 99 HOH HOH A . B 2 HOH 17 100 100 HOH HOH A . B 2 HOH 18 101 101 HOH HOH A . B 2 HOH 19 102 102 HOH HOH A . B 2 HOH 20 103 103 HOH HOH A . B 2 HOH 21 104 104 HOH HOH A . B 2 HOH 22 105 105 HOH HOH A . B 2 HOH 23 106 106 HOH HOH A . B 2 HOH 24 107 107 HOH HOH A . B 2 HOH 25 108 108 HOH HOH A . B 2 HOH 26 109 109 HOH HOH A . B 2 HOH 27 110 110 HOH HOH A . B 2 HOH 28 111 111 HOH HOH A . B 2 HOH 29 112 112 HOH HOH A . B 2 HOH 30 113 113 HOH HOH A . B 2 HOH 31 114 114 HOH HOH A . B 2 HOH 32 115 115 HOH HOH A . B 2 HOH 33 116 116 HOH HOH A . B 2 HOH 34 117 117 HOH HOH A . B 2 HOH 35 118 118 HOH HOH A . B 2 HOH 36 119 119 HOH HOH A . B 2 HOH 37 120 120 HOH HOH A . B 2 HOH 38 121 121 HOH HOH A . B 2 HOH 39 122 122 HOH HOH A . B 2 HOH 40 123 123 HOH HOH A . B 2 HOH 41 124 124 HOH HOH A . B 2 HOH 42 125 125 HOH HOH A . B 2 HOH 43 126 126 HOH HOH A . B 2 HOH 44 127 127 HOH HOH A . B 2 HOH 45 128 128 HOH HOH A . B 2 HOH 46 129 129 HOH HOH A . B 2 HOH 47 130 130 HOH HOH A . B 2 HOH 48 131 131 HOH HOH A . B 2 HOH 49 132 132 HOH HOH A . B 2 HOH 50 133 133 HOH HOH A . B 2 HOH 51 134 134 HOH HOH A . B 2 HOH 52 135 135 HOH HOH A . B 2 HOH 53 136 136 HOH HOH A . B 2 HOH 54 137 137 HOH HOH A . B 2 HOH 55 138 138 HOH HOH A . B 2 HOH 56 139 139 HOH HOH A . B 2 HOH 57 140 140 HOH HOH A . B 2 HOH 58 141 141 HOH HOH A . B 2 HOH 59 142 142 HOH HOH A . B 2 HOH 60 143 143 HOH HOH A . B 2 HOH 61 144 144 HOH HOH A . B 2 HOH 62 145 145 HOH HOH A . B 2 HOH 63 146 146 HOH HOH A . B 2 HOH 64 147 1 HOH HOH A . B 2 HOH 65 148 2 HOH HOH A . B 2 HOH 66 149 3 HOH HOH A . B 2 HOH 67 150 4 HOH HOH A . B 2 HOH 68 151 5 HOH HOH A . B 2 HOH 69 152 6 HOH HOH A . B 2 HOH 70 153 7 HOH HOH A . B 2 HOH 71 154 8 HOH HOH A . B 2 HOH 72 155 9 HOH HOH A . B 2 HOH 73 156 10 HOH HOH A . B 2 HOH 74 157 11 HOH HOH A . B 2 HOH 75 158 12 HOH HOH A . B 2 HOH 76 159 13 HOH HOH A . B 2 HOH 77 160 14 HOH HOH A . B 2 HOH 78 161 15 HOH HOH A . B 2 HOH 79 162 16 HOH HOH A . B 2 HOH 80 163 17 HOH HOH A . B 2 HOH 81 164 18 HOH HOH A . B 2 HOH 82 165 19 HOH HOH A . B 2 HOH 83 166 20 HOH HOH A . B 2 HOH 84 167 21 HOH HOH A . B 2 HOH 85 168 22 HOH HOH A . B 2 HOH 86 169 23 HOH HOH A . B 2 HOH 87 170 24 HOH HOH A . B 2 HOH 88 171 25 HOH HOH A . B 2 HOH 89 172 26 HOH HOH A . B 2 HOH 90 173 27 HOH HOH A . B 2 HOH 91 174 28 HOH HOH A . B 2 HOH 92 175 29 HOH HOH A . B 2 HOH 93 176 30 HOH HOH A . B 2 HOH 94 177 31 HOH HOH A . B 2 HOH 95 178 32 HOH HOH A . B 2 HOH 96 179 33 HOH HOH A . B 2 HOH 97 180 34 HOH HOH A . B 2 HOH 98 181 35 HOH HOH A . B 2 HOH 99 182 36 HOH HOH A . B 2 HOH 100 183 37 HOH HOH A . B 2 HOH 101 184 38 HOH HOH A . B 2 HOH 102 185 39 HOH HOH A . B 2 HOH 103 186 40 HOH HOH A . B 2 HOH 104 187 41 HOH HOH A . B 2 HOH 105 188 42 HOH HOH A . B 2 HOH 106 189 43 HOH HOH A . B 2 HOH 107 190 44 HOH HOH A . B 2 HOH 108 191 45 HOH HOH A . B 2 HOH 109 192 46 HOH HOH A . B 2 HOH 110 193 47 HOH HOH A . B 2 HOH 111 194 48 HOH HOH A . B 2 HOH 112 195 49 HOH HOH A . B 2 HOH 113 196 50 HOH HOH A . B 2 HOH 114 197 51 HOH HOH A . B 2 HOH 115 198 52 HOH HOH A . B 2 HOH 116 199 53 HOH HOH A . B 2 HOH 117 200 54 HOH HOH A . B 2 HOH 118 201 55 HOH HOH A . B 2 HOH 119 202 56 HOH HOH A . B 2 HOH 120 203 57 HOH HOH A . B 2 HOH 121 204 58 HOH HOH A . B 2 HOH 122 205 59 HOH HOH A . B 2 HOH 123 206 60 HOH HOH A . B 2 HOH 124 207 61 HOH HOH A . B 2 HOH 125 208 62 HOH HOH A . B 2 HOH 126 209 63 HOH HOH A . B 2 HOH 127 210 64 HOH HOH A . B 2 HOH 128 211 65 HOH HOH A . B 2 HOH 129 212 66 HOH HOH A . B 2 HOH 130 213 67 HOH HOH A . B 2 HOH 131 214 68 HOH HOH A . B 2 HOH 132 215 69 HOH HOH A . B 2 HOH 133 216 70 HOH HOH A . B 2 HOH 134 217 71 HOH HOH A . B 2 HOH 135 218 72 HOH HOH A . B 2 HOH 136 219 73 HOH HOH A . B 2 HOH 137 220 74 HOH HOH A . B 2 HOH 138 221 75 HOH HOH A . B 2 HOH 139 222 76 HOH HOH A . B 2 HOH 140 223 77 HOH HOH A . B 2 HOH 141 224 78 HOH HOH A . B 2 HOH 142 225 79 HOH HOH A . B 2 HOH 143 226 80 HOH HOH A . B 2 HOH 144 227 81 HOH HOH A . B 2 HOH 145 228 82 HOH HOH A . B 2 HOH 146 229 83 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 11 A MSE 11 ? MET SELENOMETHIONINE 2 A MSE 33 A MSE 33 ? MET SELENOMETHIONINE 3 A MSE 48 A MSE 48 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-02-22 4 'Structure model' 1 3 2019-07-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.contact_author' 2 4 'Structure model' '_software.contact_author_email' 3 4 'Structure model' '_software.language' 4 4 'Structure model' '_software.location' 5 4 'Structure model' '_software.name' 6 4 'Structure model' '_software.type' 7 4 'Structure model' '_software.version' 8 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX 1.6.4_486 ? ? ? ? refinement ? ? ? 2 PDB_EXTRACT 3.100 'Jan. 22, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 5 SHELX 'FOLLOWED BY SOLVE/RESOLVE' ? ? ? ? phasing ? ? ? 6 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A GLY 2 ? A GLY 2 3 1 Y 1 A HIS 3 ? A HIS 3 4 1 Y 1 A HIS 4 ? A HIS 4 5 1 Y 1 A HIS 5 ? A HIS 5 6 1 Y 1 A HIS 6 ? A HIS 6 7 1 Y 1 A LYS 80 ? A LYS 80 8 1 Y 1 A ASP 81 ? A ASP 81 9 1 Y 1 A MSE 82 ? A MSE 82 10 1 Y 1 A MSE 83 ? A MSE 83 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #