HEADER TRANSFERASE 31-AUG-10 3OOI TITLE CRYSTAL STRUCTURE OF HUMAN HISTONE-LYSINE N-METHYLTRANSFERASE NSD1 SET TITLE 2 DOMAIN IN COMPLEX WITH S-ADENOSYL-L-METHIONINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 AND H4 COMPND 3 LYSINE-20 SPECIFIC; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: SET DOMAIN; COMPND 6 SYNONYM: NUCLEAR RECEPTOR-BINDING SET DOMAIN-CONTAINING PROTEIN 1, COMPND 7 H3-K36-HMTASE, H4-K20-HMTASE; COMPND 8 EC: 2.1.1.43; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NSD1, ARA267, KMT3B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON PLUS RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P-1 KEYWDS SET DOMAIN, HISTONE-LYSINE N-METHYLTRANSFERASE, S-ADENOSYL-L- KEYWDS 2 METHIONINE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.QIAO,M.WANG,R.M.XU REVDAT 3 20-MAR-24 3OOI 1 REMARK SEQADV LINK REVDAT 2 16-MAR-11 3OOI 1 JRNL REVDAT 1 22-DEC-10 3OOI 0 JRNL AUTH Q.QIAO,Y.LI,Z.CHEN,M.WANG,D.REINBERG,R.M.XU JRNL TITL THE STRUCTURE OF NSD1 REVEALS AN AUTOREGULATORY MECHANISM JRNL TITL 2 UNDERLYING HISTONE H3K36 METHYLATION JRNL REF J.BIOL.CHEM. V. 286 8361 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 21196496 JRNL DOI 10.1074/JBC.M110.204115 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 30017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1591 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2158 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.2280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1850 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 288 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.092 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.055 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.101 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2033 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2762 ; 1.196 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 256 ; 5.093 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;31.658 ;24.158 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 364 ;11.954 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.908 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 288 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1588 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1233 ; 0.594 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2008 ; 1.161 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 800 ; 2.061 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 753 ; 3.498 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 231 REMARK 3 ORIGIN FOR THE GROUP (A): -7.5422 4.3511 -1.5978 REMARK 3 T TENSOR REMARK 3 T11: 0.0306 T22: 0.0129 REMARK 3 T33: 0.0247 T12: 0.0009 REMARK 3 T13: -0.0171 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 1.0075 L22: 0.6602 REMARK 3 L33: 0.7123 L12: -0.2563 REMARK 3 L13: -0.4410 L23: 0.2652 REMARK 3 S TENSOR REMARK 3 S11: -0.0324 S12: -0.0383 S13: -0.0756 REMARK 3 S21: 0.0182 S22: 0.0107 S23: -0.0190 REMARK 3 S31: 0.0342 S32: 0.0552 S33: 0.0217 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3OOI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-SEP-10. REMARK 100 THE DEPOSITION ID IS D_1000061374. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-09; 09-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRF; BSRF REMARK 200 BEAMLINE : BL17U; 1W2B REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8103; 1.2828, 1.2822, 1.0000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL; SI 111 CHANNEL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD; MARMOSAIC REMARK 200 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31587 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.42800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 0.1M HEPES, 25% REMARK 280 PEG3350, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.93750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.54300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.87550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.54300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.93750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.87550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 163 -161.34 -125.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 233 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 44 SG REMARK 620 2 CYS A 46 SG 110.1 REMARK 620 3 CYS A 54 SG 105.3 100.9 REMARK 620 4 CYS A 60 SG 117.4 106.7 115.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 234 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 54 SG REMARK 620 2 CYS A 69 SG 115.2 REMARK 620 3 CYS A 74 SG 101.4 115.3 REMARK 620 4 CYS A 80 SG 109.4 104.6 111.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 232 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 172 SG REMARK 620 2 CYS A 219 SG 115.9 REMARK 620 3 CYS A 221 SG 107.5 104.5 REMARK 620 4 CYS A 226 SG 108.5 106.7 113.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 234 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 236 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 237 DBREF 3OOI A 1 231 UNP Q96L73 NSD1_HUMAN 1852 2082 SEQADV 3OOI SER A 0 UNP Q96L73 EXPRESSION TAG SEQRES 1 A 232 SER LYS GLU LEU ARG GLN LEU GLN GLU ASP ARG LYS ASN SEQRES 2 A 232 ASP LYS LYS PRO PRO PRO TYR LYS HIS ILE LYS VAL ASN SEQRES 3 A 232 ARG PRO ILE GLY ARG VAL GLN ILE PHE THR ALA ASP LEU SEQRES 4 A 232 SER GLU ILE PRO ARG CYS ASN CYS LYS ALA THR ASP GLU SEQRES 5 A 232 ASN PRO CYS GLY ILE ASP SER GLU CYS ILE ASN ARG MET SEQRES 6 A 232 LEU LEU TYR GLU CYS HIS PRO THR VAL CYS PRO ALA GLY SEQRES 7 A 232 GLY ARG CYS GLN ASN GLN CYS PHE SER LYS ARG GLN TYR SEQRES 8 A 232 PRO GLU VAL GLU ILE PHE ARG THR LEU GLN ARG GLY TRP SEQRES 9 A 232 GLY LEU ARG THR LYS THR ASP ILE LYS LYS GLY GLU PHE SEQRES 10 A 232 VAL ASN GLU TYR VAL GLY GLU LEU ILE ASP GLU GLU GLU SEQRES 11 A 232 CYS ARG ALA ARG ILE ARG TYR ALA GLN GLU HIS ASP ILE SEQRES 12 A 232 THR ASN PHE TYR MET LEU THR LEU ASP LYS ASP ARG ILE SEQRES 13 A 232 ILE ASP ALA GLY PRO LYS GLY ASN TYR ALA ARG PHE MET SEQRES 14 A 232 ASN HIS CYS CYS GLN PRO ASN CYS GLU THR GLN LYS TRP SEQRES 15 A 232 SER VAL ASN GLY ASP THR ARG VAL GLY LEU PHE ALA LEU SEQRES 16 A 232 SER ASP ILE LYS ALA GLY THR GLU LEU THR PHE ASN TYR SEQRES 17 A 232 ASN LEU GLU CYS LEU GLY ASN GLY LYS THR VAL CYS LYS SEQRES 18 A 232 CYS GLY ALA PRO ASN CYS SER GLY PHE LEU GLY HET ZN A 232 1 HET ZN A 233 1 HET ZN A 234 1 HET SO4 A 235 5 HET SO4 A 236 5 HET SAM A 237 27 HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM SAM S-ADENOSYLMETHIONINE FORMUL 2 ZN 3(ZN 2+) FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 SAM C15 H22 N6 O5 S FORMUL 8 HOH *288(H2 O) HELIX 1 1 SER A 0 ASP A 13 1 14 HELIX 2 2 ASP A 37 ILE A 41 5 5 HELIX 3 3 CYS A 60 LEU A 65 1 6 HELIX 4 4 ALA A 76 CYS A 80 5 5 HELIX 5 5 GLN A 83 ARG A 88 1 6 HELIX 6 6 ASP A 126 HIS A 140 1 15 HELIX 7 7 TYR A 164 MET A 168 5 5 SHEET 1 A 4 LYS A 20 HIS A 21 0 SHEET 2 A 4 ARG A 154 GLY A 162 1 O PRO A 160 N LYS A 20 SHEET 3 A 4 GLY A 122 ILE A 125 -1 N GLU A 123 O ASP A 157 SHEET 4 A 4 ARG A 26 PRO A 27 1 N ARG A 26 O LEU A 124 SHEET 1 B 3 LYS A 20 HIS A 21 0 SHEET 2 B 3 ARG A 154 GLY A 162 1 O PRO A 160 N LYS A 20 SHEET 3 B 3 MET A 147 ASP A 151 -1 N LEU A 148 O ILE A 156 SHEET 1 C 2 VAL A 93 ARG A 97 0 SHEET 2 C 2 TRP A 103 THR A 107 -1 O GLY A 104 N PHE A 96 SHEET 1 D 3 PHE A 116 GLU A 119 0 SHEET 2 D 3 ASP A 186 ALA A 193 -1 O LEU A 191 N ASN A 118 SHEET 3 D 3 CYS A 176 VAL A 183 -1 N VAL A 183 O ASP A 186 SHEET 1 E 2 ASN A 169 HIS A 170 0 SHEET 2 E 2 THR A 204 PHE A 205 1 O PHE A 205 N ASN A 169 LINK SG CYS A 44 ZN ZN A 233 1555 1555 2.29 LINK SG CYS A 46 ZN ZN A 233 1555 1555 2.42 LINK SG CYS A 54 ZN ZN A 233 1555 1555 2.35 LINK SG CYS A 54 ZN ZN A 234 1555 1555 2.39 LINK SG CYS A 60 ZN ZN A 233 1555 1555 2.34 LINK SG CYS A 69 ZN ZN A 234 1555 1555 2.35 LINK SG CYS A 74 ZN ZN A 234 1555 1555 2.33 LINK SG CYS A 80 ZN ZN A 234 1555 1555 2.36 LINK SG CYS A 172 ZN ZN A 232 1555 1555 2.42 LINK SG CYS A 219 ZN ZN A 232 1555 1555 2.30 LINK SG CYS A 221 ZN ZN A 232 1555 1555 2.33 LINK SG CYS A 226 ZN ZN A 232 1555 1555 2.35 SITE 1 AC1 4 CYS A 172 CYS A 219 CYS A 221 CYS A 226 SITE 1 AC2 4 CYS A 44 CYS A 46 CYS A 54 CYS A 60 SITE 1 AC3 4 CYS A 54 CYS A 69 CYS A 74 CYS A 80 SITE 1 AC4 10 GLY A 77 GLY A 78 THR A 98 LEU A 99 SITE 2 AC4 10 GLN A 100 ARG A 101 HOH A 322 HOH A 383 SITE 3 AC4 10 HOH A 585 HOH A 607 SITE 1 AC5 5 ILE A 22 LYS A 23 VAL A 24 ARG A 26 SITE 2 AC5 5 HOH A 414 SITE 1 AC6 20 ARG A 101 TRP A 103 THR A 143 ASN A 144 SITE 2 AC6 20 PHE A 145 TYR A 146 ARG A 166 ASN A 169 SITE 3 AC6 20 HIS A 170 TYR A 207 ASN A 214 VAL A 218 SITE 4 AC6 20 CYS A 219 LYS A 220 LEU A 230 HOH A 277 SITE 5 AC6 20 HOH A 278 HOH A 366 HOH A 401 HOH A 458 CRYST1 65.875 67.751 69.086 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015180 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014760 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014475 0.00000