data_3OOL # _entry.id 3OOL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3OOL pdb_00003ool 10.2210/pdb3ool/pdb NDB NA0721 ? ? RCSB RCSB061377 ? ? WWPDB D_1000061377 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3OOR _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3OOL _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-08-31 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joshi, R.' 1 'Chen, J.-H.' 2 'Golden, B.L.' 3 'Gimble, F.S.' 4 # _citation.id primary _citation.title 'Evolution of I-SceI Homing Endonucleases with Increased DNA Recognition Site Specificity.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 405 _citation.page_first 185 _citation.page_last 200 _citation.year 2011 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21029741 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2010.10.029 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Joshi, R.' 1 ? primary 'Ho, K.K.' 2 ? primary 'Tenney, K.' 3 ? primary 'Chen, J.H.' 4 ? primary 'Golden, B.L.' 5 ? primary 'Gimble, F.S.' 6 ? # _cell.length_a 129.184 _cell.length_b 49.938 _cell.length_c 63.360 _cell.angle_alpha 90.000 _cell.angle_beta 107.540 _cell.angle_gamma 90.000 _cell.entry_id 3OOL _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 3OOL _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Intron encoded endonuclease I-SceI' 27986.564 1 3.1.-.- ? ? ? 2 polymer syn "5'-D(*CP*AP*CP*GP*CP*TP*AP*GP*GP*GP*AP*TP*AP*AP*CP*CP*GP*GP*GP*TP*AP*AP*TP*AP*C)-3'" 7717.000 1 ? ? ? 'Top strand of I-SceI C/G+4 DNA target' 3 polymer syn "5'-D(*GP*GP*TP*AP*TP*TP*AP*CP*CP*CP*GP*GP*TP*TP*AP*TP*CP*CP*CP*TP*AP*GP*CP*GP*T)-3'" 7640.919 1 ? ? ? 'Bottom strand of I-SceI C/G+4 DNA target' 4 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 5 water nat water 18.015 36 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '21S rRNA intron maturase, Homing endonuclease omega' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHMKNIKKNQVMNLGPNSKLLKEYKSQLIELNIEQFEAGIGLILGDAYIRSRDEGKTYCMQFEWKNKAYMDHVCLLYDQW VLSPPHKKERVNHLGNLVITWGAQTFKHQAFNKLANLFIVNNKKTIPNNLVENYLTPMSLAYWFMDDGGKWDYNKNSTNK SIVLNTQSFTFEEVEYLVKGLRNKFQLNCYVKINKNKPIIYIDSMSYLIFYNLIKPYLIPQMMYKLPNTISSETFLK ; ;MHMKNIKKNQVMNLGPNSKLLKEYKSQLIELNIEQFEAGIGLILGDAYIRSRDEGKTYCMQFEWKNKAYMDHVCLLYDQW VLSPPHKKERVNHLGNLVITWGAQTFKHQAFNKLANLFIVNNKKTIPNNLVENYLTPMSLAYWFMDDGGKWDYNKNSTNK SIVLNTQSFTFEEVEYLVKGLRNKFQLNCYVKINKNKPIIYIDSMSYLIFYNLIKPYLIPQMMYKLPNTISSETFLK ; A ? 2 polydeoxyribonucleotide no no ;(DC)(DA)(DC)(DG)(DC)(DT)(DA)(DG)(DG)(DG)(DA)(DT)(DA)(DA)(DC)(DC)(DG)(DG)(DG)(DT) (DA)(DA)(DT)(DA)(DC) ; CACGCTAGGGATAACCGGGTAATAC C ? 3 polydeoxyribonucleotide no no ;(DG)(DG)(DT)(DA)(DT)(DT)(DA)(DC)(DC)(DC)(DG)(DG)(DT)(DT)(DA)(DT)(DC)(DC)(DC)(DT) (DA)(DG)(DC)(DG)(DT) ; GGTATTACCCGGTTATCCCTAGCGT D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 MET n 1 4 LYS n 1 5 ASN n 1 6 ILE n 1 7 LYS n 1 8 LYS n 1 9 ASN n 1 10 GLN n 1 11 VAL n 1 12 MET n 1 13 ASN n 1 14 LEU n 1 15 GLY n 1 16 PRO n 1 17 ASN n 1 18 SER n 1 19 LYS n 1 20 LEU n 1 21 LEU n 1 22 LYS n 1 23 GLU n 1 24 TYR n 1 25 LYS n 1 26 SER n 1 27 GLN n 1 28 LEU n 1 29 ILE n 1 30 GLU n 1 31 LEU n 1 32 ASN n 1 33 ILE n 1 34 GLU n 1 35 GLN n 1 36 PHE n 1 37 GLU n 1 38 ALA n 1 39 GLY n 1 40 ILE n 1 41 GLY n 1 42 LEU n 1 43 ILE n 1 44 LEU n 1 45 GLY n 1 46 ASP n 1 47 ALA n 1 48 TYR n 1 49 ILE n 1 50 ARG n 1 51 SER n 1 52 ARG n 1 53 ASP n 1 54 GLU n 1 55 GLY n 1 56 LYS n 1 57 THR n 1 58 TYR n 1 59 CYS n 1 60 MET n 1 61 GLN n 1 62 PHE n 1 63 GLU n 1 64 TRP n 1 65 LYS n 1 66 ASN n 1 67 LYS n 1 68 ALA n 1 69 TYR n 1 70 MET n 1 71 ASP n 1 72 HIS n 1 73 VAL n 1 74 CYS n 1 75 LEU n 1 76 LEU n 1 77 TYR n 1 78 ASP n 1 79 GLN n 1 80 TRP n 1 81 VAL n 1 82 LEU n 1 83 SER n 1 84 PRO n 1 85 PRO n 1 86 HIS n 1 87 LYS n 1 88 LYS n 1 89 GLU n 1 90 ARG n 1 91 VAL n 1 92 ASN n 1 93 HIS n 1 94 LEU n 1 95 GLY n 1 96 ASN n 1 97 LEU n 1 98 VAL n 1 99 ILE n 1 100 THR n 1 101 TRP n 1 102 GLY n 1 103 ALA n 1 104 GLN n 1 105 THR n 1 106 PHE n 1 107 LYS n 1 108 HIS n 1 109 GLN n 1 110 ALA n 1 111 PHE n 1 112 ASN n 1 113 LYS n 1 114 LEU n 1 115 ALA n 1 116 ASN n 1 117 LEU n 1 118 PHE n 1 119 ILE n 1 120 VAL n 1 121 ASN n 1 122 ASN n 1 123 LYS n 1 124 LYS n 1 125 THR n 1 126 ILE n 1 127 PRO n 1 128 ASN n 1 129 ASN n 1 130 LEU n 1 131 VAL n 1 132 GLU n 1 133 ASN n 1 134 TYR n 1 135 LEU n 1 136 THR n 1 137 PRO n 1 138 MET n 1 139 SER n 1 140 LEU n 1 141 ALA n 1 142 TYR n 1 143 TRP n 1 144 PHE n 1 145 MET n 1 146 ASP n 1 147 ASP n 1 148 GLY n 1 149 GLY n 1 150 LYS n 1 151 TRP n 1 152 ASP n 1 153 TYR n 1 154 ASN n 1 155 LYS n 1 156 ASN n 1 157 SER n 1 158 THR n 1 159 ASN n 1 160 LYS n 1 161 SER n 1 162 ILE n 1 163 VAL n 1 164 LEU n 1 165 ASN n 1 166 THR n 1 167 GLN n 1 168 SER n 1 169 PHE n 1 170 THR n 1 171 PHE n 1 172 GLU n 1 173 GLU n 1 174 VAL n 1 175 GLU n 1 176 TYR n 1 177 LEU n 1 178 VAL n 1 179 LYS n 1 180 GLY n 1 181 LEU n 1 182 ARG n 1 183 ASN n 1 184 LYS n 1 185 PHE n 1 186 GLN n 1 187 LEU n 1 188 ASN n 1 189 CYS n 1 190 TYR n 1 191 VAL n 1 192 LYS n 1 193 ILE n 1 194 ASN n 1 195 LYS n 1 196 ASN n 1 197 LYS n 1 198 PRO n 1 199 ILE n 1 200 ILE n 1 201 TYR n 1 202 ILE n 1 203 ASP n 1 204 SER n 1 205 MET n 1 206 SER n 1 207 TYR n 1 208 LEU n 1 209 ILE n 1 210 PHE n 1 211 TYR n 1 212 ASN n 1 213 LEU n 1 214 ILE n 1 215 LYS n 1 216 PRO n 1 217 TYR n 1 218 LEU n 1 219 ILE n 1 220 PRO n 1 221 GLN n 1 222 MET n 1 223 MET n 1 224 TYR n 1 225 LYS n 1 226 LEU n 1 227 PRO n 1 228 ASN n 1 229 THR n 1 230 ILE n 1 231 SER n 1 232 SER n 1 233 GLU n 1 234 THR n 1 235 PHE n 1 236 LEU n 1 237 LYS n 2 1 DC n 2 2 DA n 2 3 DC n 2 4 DG n 2 5 DC n 2 6 DT n 2 7 DA n 2 8 DG n 2 9 DG n 2 10 DG n 2 11 DA n 2 12 DT n 2 13 DA n 2 14 DA n 2 15 DC n 2 16 DC n 2 17 DG n 2 18 DG n 2 19 DG n 2 20 DT n 2 21 DA n 2 22 DA n 2 23 DT n 2 24 DA n 2 25 DC n 3 1 DG n 3 2 DG n 3 3 DT n 3 4 DA n 3 5 DT n 3 6 DT n 3 7 DA n 3 8 DC n 3 9 DC n 3 10 DC n 3 11 DG n 3 12 DG n 3 13 DT n 3 14 DT n 3 15 DA n 3 16 DT n 3 17 DC n 3 18 DC n 3 19 DC n 3 20 DT n 3 21 DA n 3 22 DG n 3 23 DC n 3 24 DG n 3 25 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name yeast _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SceI,omega _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP SCE1_YEAST P03882 1 ;MKNIKKNQVMNLGPNSKLLKEYKSQLIELNIEQFEAGIGLILGDAYIRSRDEGKTYCMQFEWKNKAYMDHVCLLYDQWVL SPPHKKERVNHLGNLVITWGAQTFKHQAFNKLANLFIVNNKKTIPNNLVENYLTPMSLAYWFMDDGGKWDYNKNSTNKSI VLNTQSFTFEEVEYLVKGLRNKFQLNCYVKINKNKPIIYIDSMSYLIFYNLIKPYLIPQMMYKLPNTISSETFLK ; 1 ? 2 PDB 3OOL 3OOL 2 CACGCTAGGGATAACCGGGTAATAC ? ? 3 PDB 3OOL 3OOL 3 GGTATTACCCGGTTATCCCTAGCGT ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3OOL A 3 ? 237 ? P03882 1 ? 235 ? 1 235 2 2 3OOL C 1 ? 25 ? 3OOL 1 ? 25 ? 1 25 3 3 3OOL D 1 ? 25 ? 3OOL 1 ? 25 ? 1 25 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3OOL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.pdbx_details 'PEG400,CaCl2,NaOAc,DTT, pH 4.7, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2009-04-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Double crystal cryo-cooled' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength .979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_wavelength_list .979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B # _reflns.entry_id 3OOL _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 50.000 _reflns.number_obs 22091 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_netI_over_sigmaI 18.000 _reflns.pdbx_chi_squared 2.015 _reflns.pdbx_redundancy 3.400 _reflns.percent_possible_obs 84.100 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.000 2.070 ? ? ? 0.174 ? ? 1.019 2.700 ? 2247 86.900 ? 1 2.070 2.150 ? ? ? 0.182 ? ? 1.446 3.000 ? 2464 94.400 ? 2 2.150 2.250 ? ? ? 0.174 ? ? 6.039 3.000 ? 1408 54.100 ? 3 2.250 2.370 ? ? ? 0.150 ? ? 3.917 3.400 ? 1548 59.000 ? 4 2.370 2.520 ? ? ? 0.103 ? ? 1.618 3.600 ? 2600 99.700 ? 5 2.520 2.710 ? ? ? 0.080 ? ? 1.574 3.700 ? 2606 100.000 ? 6 2.710 2.990 ? ? ? 0.058 ? ? 1.796 3.800 ? 2615 99.900 ? 7 2.990 3.420 ? ? ? 0.052 ? ? 1.788 3.700 ? 2633 99.900 ? 8 3.420 4.310 ? ? ? 0.043 ? ? 1.786 3.400 ? 1337 50.500 ? 9 4.310 50.000 ? ? ? 0.041 ? ? 1.716 3.600 ? 2633 97.000 ? 10 # _refine.entry_id 3OOL _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 30.7900 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 91.5800 _refine.ls_number_reflns_obs 15880 _refine.ls_number_reflns_all 17337 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.327 _refine.ls_R_factor_obs 0.2496 _refine.ls_R_factor_R_work 0.2463 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2940 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 7.1000 _refine.ls_number_reflns_R_free 1133 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 43.9129 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.1200 _refine.aniso_B[2][2] 0.3900 _refine.aniso_B[3][3] -0.6000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.1500 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9290 _refine.correlation_coeff_Fo_to_Fc_free 0.9020 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.3150 _refine.overall_SU_ML 0.2400 _refine.overall_SU_B 21.1980 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 1R7M' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 119.270 _refine.B_iso_min 2.000 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1854 _refine_hist.pdbx_number_atoms_nucleic_acid 984 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 2877 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 30.7900 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 3003 0.006 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 4265 1.146 2.370 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 222 5.381 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 91 34.034 25.385 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 356 15.887 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 4 11.230 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 466 0.062 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1924 0.004 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1113 0.262 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1807 0.491 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1890 0.591 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 2458 0.959 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.3000 _refine_ls_shell.d_res_low 2.3590 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.9200 _refine_ls_shell.number_reflns_R_work 1137 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3400 _refine_ls_shell.R_factor_R_free 0.4020 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 91 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1228 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3OOL _struct.title 'I-SceI complexed with C/G+4 DNA substrate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OOL _struct_keywords.text 'homing endonuclease, intron homing, LAGLIDADG, Hydrolase-DNA complex' _struct_keywords.pdbx_keywords HYDROLASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 7 ? VAL A 11 ? LYS A 5 VAL A 9 5 ? 5 HELX_P HELX_P2 2 SER A 18 ? LEU A 28 ? SER A 16 LEU A 26 1 ? 11 HELX_P HELX_P3 3 ASN A 32 ? GLY A 45 ? ASN A 30 GLY A 43 1 ? 14 HELX_P HELX_P4 4 ASN A 66 ? TYR A 77 ? ASN A 64 TYR A 75 1 ? 12 HELX_P HELX_P5 5 ASP A 78 ? VAL A 81 ? ASP A 76 VAL A 79 5 ? 4 HELX_P HELX_P6 6 HIS A 108 ? ALA A 110 ? HIS A 106 ALA A 108 5 ? 3 HELX_P HELX_P7 7 PHE A 111 ? ILE A 119 ? PHE A 109 ILE A 117 1 ? 9 HELX_P HELX_P8 8 ASN A 129 ? LEU A 135 ? ASN A 127 LEU A 133 1 ? 7 HELX_P HELX_P9 9 THR A 136 ? ASP A 147 ? THR A 134 ASP A 145 1 ? 12 HELX_P HELX_P10 10 THR A 170 ? GLN A 186 ? THR A 168 GLN A 184 1 ? 17 HELX_P HELX_P11 11 SER A 206 ? LYS A 215 ? SER A 204 LYS A 213 1 ? 10 HELX_P HELX_P12 12 ILE A 219 ? LEU A 226 ? ILE A 217 LEU A 224 5 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLY 45 O ? ? ? 1_555 E CA . CA ? ? A GLY 43 A CA 237 1_555 ? ? ? ? ? ? ? 2.637 ? ? metalc2 metalc ? ? A ASP 46 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 44 A CA 236 1_555 ? ? ? ? ? ? ? 2.312 ? ? metalc3 metalc ? ? A ASP 46 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 44 A CA 237 1_555 ? ? ? ? ? ? ? 3.000 ? ? metalc4 metalc ? ? A ASP 146 O ? ? ? 1_555 D CA . CA ? ? A ASP 144 A CA 236 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc5 metalc ? ? A ASP 147 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 145 A CA 237 1_555 ? ? ? ? ? ? ? 2.729 ? ? metalc6 metalc ? ? D CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 236 A HOH 243 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc7 metalc ? ? D CA . CA ? ? ? 1_555 B DA 14 OP1 ? ? A CA 236 C DA 14 1_555 ? ? ? ? ? ? ? 2.136 ? ? metalc8 metalc ? ? D CA . CA ? ? ? 1_555 C DC 17 OP1 ? ? A CA 236 D DC 17 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc9 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 237 A HOH 253 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc10 metalc ? ? E CA . CA ? ? ? 1_555 B DC 15 OP2 ? ? A CA 237 C DC 15 1_555 ? ? ? ? ? ? ? 2.313 ? ? metalc11 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 237 D HOH 31 1_555 ? ? ? ? ? ? ? 2.453 ? ? metalc12 metalc ? ? B DC 15 OP1 ? ? ? 1_555 F CA . CA ? ? C DC 15 C CA 26 1_555 ? ? ? ? ? ? ? 2.217 ? ? metalc13 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? C CA 26 C HOH 31 1_555 ? ? ? ? ? ? ? 2.537 ? ? metalc14 metalc ? ? F CA . CA ? ? ? 1_555 H HOH . O ? ? C CA 26 C HOH 33 1_555 ? ? ? ? ? ? ? 2.562 ? ? metalc15 metalc ? ? F CA . CA ? ? ? 1_555 C DT 16 OP1 ? ? C CA 26 D DT 16 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc16 metalc ? ? F CA . CA ? ? ? 1_555 I HOH . O ? ? C CA 26 D HOH 29 1_555 ? ? ? ? ? ? ? 2.376 ? ? hydrog1 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 25 N3 ? ? C DA 2 D DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 25 O4 ? ? C DA 2 D DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 24 N1 ? ? C DC 3 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 24 O6 ? ? C DC 3 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 24 N2 ? ? C DC 3 D DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 23 N3 ? ? C DG 4 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 23 O2 ? ? C DG 4 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 23 N4 ? ? C DG 4 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 22 N1 ? ? C DC 5 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 22 O6 ? ? C DC 5 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 22 N2 ? ? C DC 5 D DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 21 N1 ? ? C DT 6 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 21 N6 ? ? C DT 6 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 20 N3 ? ? C DA 7 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 20 O4 ? ? C DA 7 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 19 N3 ? ? C DG 8 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 19 O2 ? ? C DG 8 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 19 N4 ? ? C DG 8 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 18 N3 ? ? C DG 9 D DC 18 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog20 hydrog ? ? B DG 10 N1 ? ? ? 1_555 C DC 17 N3 ? ? C DG 10 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 10 N2 ? ? ? 1_555 C DC 17 O2 ? ? C DG 10 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 10 O6 ? ? ? 1_555 C DC 17 N4 ? ? C DG 10 D DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DA 11 N1 ? ? ? 1_555 C DT 16 N3 ? ? C DA 11 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DA 11 N6 ? ? ? 1_555 C DT 16 O4 ? ? C DA 11 D DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 15 N1 ? ? C DT 12 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 15 N6 ? ? C DT 12 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 13 N1 ? ? ? 1_555 C DT 14 N3 ? ? C DA 13 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 13 N6 ? ? ? 1_555 C DT 14 O4 ? ? C DA 13 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 13 N3 ? ? C DA 14 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 13 O4 ? ? C DA 14 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 12 N1 ? ? C DC 15 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 12 O6 ? ? C DC 15 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 12 N2 ? ? C DC 15 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 11 N1 ? ? C DC 16 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 11 O6 ? ? C DC 16 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 11 N2 ? ? C DC 16 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 17 N1 ? ? ? 1_555 C DC 10 N3 ? ? C DG 17 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DG 17 N2 ? ? ? 1_555 C DC 10 O2 ? ? C DG 17 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DG 17 O6 ? ? ? 1_555 C DC 10 N4 ? ? C DG 17 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DG 18 N1 ? ? ? 1_555 C DC 9 N3 ? ? C DG 18 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DG 18 N2 ? ? ? 1_555 C DC 9 O2 ? ? C DG 18 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DG 18 O6 ? ? ? 1_555 C DC 9 N4 ? ? C DG 18 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DG 19 N1 ? ? ? 1_555 C DC 8 N3 ? ? C DG 19 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DG 19 N2 ? ? ? 1_555 C DC 8 O2 ? ? C DG 19 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DG 19 O6 ? ? ? 1_555 C DC 8 N4 ? ? C DG 19 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DT 20 N3 ? ? ? 1_555 C DA 7 N1 ? ? C DT 20 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DT 20 O4 ? ? ? 1_555 C DA 7 N6 ? ? C DT 20 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DA 21 N1 ? ? ? 1_555 C DT 6 N3 ? ? C DA 21 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DA 21 N6 ? ? ? 1_555 C DT 6 O4 ? ? C DA 21 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DA 22 N1 ? ? ? 1_555 C DT 5 N3 ? ? C DA 22 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DA 22 N6 ? ? ? 1_555 C DT 5 O4 ? ? C DA 22 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DT 23 N3 ? ? ? 1_555 C DA 4 N1 ? ? C DT 23 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DT 23 O4 ? ? ? 1_555 C DA 4 N6 ? ? C DT 23 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DA 24 N1 ? ? ? 1_555 C DT 3 N3 ? ? C DA 24 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DA 24 N6 ? ? ? 1_555 C DT 3 O4 ? ? C DA 24 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DC 25 N3 ? ? ? 1_555 C DG 2 N1 ? ? C DC 25 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DC 25 N4 ? ? ? 1_555 C DG 2 O6 ? ? C DC 25 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DC 25 O2 ? ? ? 1_555 C DG 2 N2 ? ? C DC 25 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 48 ? ARG A 50 ? TYR A 46 ARG A 48 A 2 CYS A 59 ? TRP A 64 ? CYS A 57 TRP A 62 A 3 LEU A 97 ? GLN A 104 ? LEU A 95 GLN A 102 A 4 HIS A 86 ? VAL A 91 ? HIS A 84 VAL A 89 B 1 GLY A 148 ? LYS A 150 ? GLY A 146 LYS A 148 B 2 ILE A 162 ? LEU A 164 ? ILE A 160 LEU A 162 B 3 LYS A 197 ? ILE A 202 ? LYS A 195 ILE A 200 B 4 CYS A 189 ? ASN A 194 ? CYS A 187 ASN A 192 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 48 ? N TYR A 46 O GLN A 61 ? O GLN A 59 A 2 3 N PHE A 62 ? N PHE A 60 O ALA A 103 ? O ALA A 101 A 3 4 O GLY A 102 ? O GLY A 100 N HIS A 86 ? N HIS A 84 B 1 2 N GLY A 149 ? N GLY A 147 O VAL A 163 ? O VAL A 161 B 2 3 N ILE A 162 ? N ILE A 160 O ILE A 202 ? O ILE A 200 B 3 4 O TYR A 201 ? O TYR A 199 N TYR A 190 ? N TYR A 188 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 236 ? 5 'BINDING SITE FOR RESIDUE CA A 236' AC2 Software A CA 237 ? 6 'BINDING SITE FOR RESIDUE CA A 237' AC3 Software C CA 26 ? 5 'BINDING SITE FOR RESIDUE CA C 26' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 46 ? ASP A 44 . ? 1_555 ? 2 AC1 5 ASP A 146 ? ASP A 144 . ? 1_555 ? 3 AC1 5 HOH G . ? HOH A 243 . ? 1_555 ? 4 AC1 5 DA B 14 ? DA C 14 . ? 1_555 ? 5 AC1 5 DC C 17 ? DC D 17 . ? 1_555 ? 6 AC2 6 GLY A 45 ? GLY A 43 . ? 1_555 ? 7 AC2 6 ASP A 46 ? ASP A 44 . ? 1_555 ? 8 AC2 6 ASP A 147 ? ASP A 145 . ? 1_555 ? 9 AC2 6 HOH G . ? HOH A 253 . ? 1_555 ? 10 AC2 6 DC B 15 ? DC C 15 . ? 1_555 ? 11 AC2 6 HOH I . ? HOH D 31 . ? 1_555 ? 12 AC3 5 DC B 15 ? DC C 15 . ? 1_555 ? 13 AC3 5 HOH H . ? HOH C 31 . ? 1_555 ? 14 AC3 5 HOH H . ? HOH C 33 . ? 1_555 ? 15 AC3 5 DT C 16 ? DT D 16 . ? 1_555 ? 16 AC3 5 HOH I . ? HOH D 29 . ? 1_555 ? # _atom_sites.entry_id 3OOL _atom_sites.fract_transf_matrix[1][1] 0.007741 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002447 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020025 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016553 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 HIS 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 LYS 4 2 ? ? ? A . n A 1 5 ASN 5 3 3 ASN ASN A . n A 1 6 ILE 6 4 4 ILE ILE A . n A 1 7 LYS 7 5 5 LYS LYS A . n A 1 8 LYS 8 6 6 LYS LYS A . n A 1 9 ASN 9 7 7 ASN ASN A . n A 1 10 GLN 10 8 8 GLN GLN A . n A 1 11 VAL 11 9 9 VAL VAL A . n A 1 12 MET 12 10 10 MET MET A . n A 1 13 ASN 13 11 11 ASN ASN A . n A 1 14 LEU 14 12 12 LEU LEU A . n A 1 15 GLY 15 13 13 GLY GLY A . n A 1 16 PRO 16 14 14 PRO PRO A . n A 1 17 ASN 17 15 15 ASN ASN A . n A 1 18 SER 18 16 16 SER SER A . n A 1 19 LYS 19 17 17 LYS LYS A . n A 1 20 LEU 20 18 18 LEU LEU A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 LYS 22 20 20 LYS LYS A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 TYR 24 22 22 TYR TYR A . n A 1 25 LYS 25 23 23 LYS LYS A . n A 1 26 SER 26 24 24 SER SER A . n A 1 27 GLN 27 25 25 GLN GLN A . n A 1 28 LEU 28 26 26 LEU LEU A . n A 1 29 ILE 29 27 27 ILE ILE A . n A 1 30 GLU 30 28 28 GLU GLU A . n A 1 31 LEU 31 29 29 LEU LEU A . n A 1 32 ASN 32 30 30 ASN ASN A . n A 1 33 ILE 33 31 31 ILE ILE A . n A 1 34 GLU 34 32 32 GLU GLU A . n A 1 35 GLN 35 33 33 GLN GLN A . n A 1 36 PHE 36 34 34 PHE PHE A . n A 1 37 GLU 37 35 35 GLU GLU A . n A 1 38 ALA 38 36 36 ALA ALA A . n A 1 39 GLY 39 37 37 GLY GLY A . n A 1 40 ILE 40 38 38 ILE ILE A . n A 1 41 GLY 41 39 39 GLY GLY A . n A 1 42 LEU 42 40 40 LEU LEU A . n A 1 43 ILE 43 41 41 ILE ILE A . n A 1 44 LEU 44 42 42 LEU LEU A . n A 1 45 GLY 45 43 43 GLY GLY A . n A 1 46 ASP 46 44 44 ASP ASP A . n A 1 47 ALA 47 45 45 ALA ALA A . n A 1 48 TYR 48 46 46 TYR TYR A . n A 1 49 ILE 49 47 47 ILE ILE A . n A 1 50 ARG 50 48 48 ARG ARG A . n A 1 51 SER 51 49 49 SER SER A . n A 1 52 ARG 52 50 50 ARG ARG A . n A 1 53 ASP 53 51 51 ASP ASP A . n A 1 54 GLU 54 52 52 GLU GLU A . n A 1 55 GLY 55 53 53 GLY GLY A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 THR 57 55 55 THR THR A . n A 1 58 TYR 58 56 56 TYR TYR A . n A 1 59 CYS 59 57 57 CYS CYS A . n A 1 60 MET 60 58 58 MET MET A . n A 1 61 GLN 61 59 59 GLN GLN A . n A 1 62 PHE 62 60 60 PHE PHE A . n A 1 63 GLU 63 61 61 GLU GLU A . n A 1 64 TRP 64 62 62 TRP TRP A . n A 1 65 LYS 65 63 63 LYS LYS A . n A 1 66 ASN 66 64 64 ASN ASN A . n A 1 67 LYS 67 65 65 LYS LYS A . n A 1 68 ALA 68 66 66 ALA ALA A . n A 1 69 TYR 69 67 67 TYR TYR A . n A 1 70 MET 70 68 68 MET MET A . n A 1 71 ASP 71 69 69 ASP ASP A . n A 1 72 HIS 72 70 70 HIS HIS A . n A 1 73 VAL 73 71 71 VAL VAL A . n A 1 74 CYS 74 72 72 CYS CYS A . n A 1 75 LEU 75 73 73 LEU LEU A . n A 1 76 LEU 76 74 74 LEU LEU A . n A 1 77 TYR 77 75 75 TYR TYR A . n A 1 78 ASP 78 76 76 ASP ASP A . n A 1 79 GLN 79 77 77 GLN GLN A . n A 1 80 TRP 80 78 78 TRP TRP A . n A 1 81 VAL 81 79 79 VAL VAL A . n A 1 82 LEU 82 80 80 LEU LEU A . n A 1 83 SER 83 81 81 SER SER A . n A 1 84 PRO 84 82 82 PRO PRO A . n A 1 85 PRO 85 83 83 PRO PRO A . n A 1 86 HIS 86 84 84 HIS HIS A . n A 1 87 LYS 87 85 85 LYS LYS A . n A 1 88 LYS 88 86 86 LYS LYS A . n A 1 89 GLU 89 87 87 GLU GLU A . n A 1 90 ARG 90 88 88 ARG ARG A . n A 1 91 VAL 91 89 89 VAL VAL A . n A 1 92 ASN 92 90 90 ASN ASN A . n A 1 93 HIS 93 91 91 HIS HIS A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 GLY 95 93 93 GLY GLY A . n A 1 96 ASN 96 94 94 ASN ASN A . n A 1 97 LEU 97 95 95 LEU LEU A . n A 1 98 VAL 98 96 96 VAL VAL A . n A 1 99 ILE 99 97 97 ILE ILE A . n A 1 100 THR 100 98 98 THR THR A . n A 1 101 TRP 101 99 99 TRP TRP A . n A 1 102 GLY 102 100 100 GLY GLY A . n A 1 103 ALA 103 101 101 ALA ALA A . n A 1 104 GLN 104 102 102 GLN GLN A . n A 1 105 THR 105 103 103 THR THR A . n A 1 106 PHE 106 104 104 PHE PHE A . n A 1 107 LYS 107 105 105 LYS LYS A . n A 1 108 HIS 108 106 106 HIS HIS A . n A 1 109 GLN 109 107 107 GLN GLN A . n A 1 110 ALA 110 108 108 ALA ALA A . n A 1 111 PHE 111 109 109 PHE PHE A . n A 1 112 ASN 112 110 110 ASN ASN A . n A 1 113 LYS 113 111 111 LYS LYS A . n A 1 114 LEU 114 112 112 LEU LEU A . n A 1 115 ALA 115 113 113 ALA ALA A . n A 1 116 ASN 116 114 114 ASN ASN A . n A 1 117 LEU 117 115 115 LEU LEU A . n A 1 118 PHE 118 116 116 PHE PHE A . n A 1 119 ILE 119 117 117 ILE ILE A . n A 1 120 VAL 120 118 118 VAL VAL A . n A 1 121 ASN 121 119 119 ASN ASN A . n A 1 122 ASN 122 120 120 ASN ASN A . n A 1 123 LYS 123 121 121 LYS LYS A . n A 1 124 LYS 124 122 122 LYS LYS A . n A 1 125 THR 125 123 123 THR THR A . n A 1 126 ILE 126 124 124 ILE ILE A . n A 1 127 PRO 127 125 125 PRO PRO A . n A 1 128 ASN 128 126 126 ASN ASN A . n A 1 129 ASN 129 127 127 ASN ASN A . n A 1 130 LEU 130 128 128 LEU LEU A . n A 1 131 VAL 131 129 129 VAL VAL A . n A 1 132 GLU 132 130 130 GLU GLU A . n A 1 133 ASN 133 131 131 ASN ASN A . n A 1 134 TYR 134 132 132 TYR TYR A . n A 1 135 LEU 135 133 133 LEU LEU A . n A 1 136 THR 136 134 134 THR THR A . n A 1 137 PRO 137 135 135 PRO PRO A . n A 1 138 MET 138 136 136 MET MET A . n A 1 139 SER 139 137 137 SER SER A . n A 1 140 LEU 140 138 138 LEU LEU A . n A 1 141 ALA 141 139 139 ALA ALA A . n A 1 142 TYR 142 140 140 TYR TYR A . n A 1 143 TRP 143 141 141 TRP TRP A . n A 1 144 PHE 144 142 142 PHE PHE A . n A 1 145 MET 145 143 143 MET MET A . n A 1 146 ASP 146 144 144 ASP ASP A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 GLY 148 146 146 GLY GLY A . n A 1 149 GLY 149 147 147 GLY GLY A . n A 1 150 LYS 150 148 148 LYS LYS A . n A 1 151 TRP 151 149 149 TRP TRP A . n A 1 152 ASP 152 150 150 ASP ASP A . n A 1 153 TYR 153 151 151 TYR TYR A . n A 1 154 ASN 154 152 152 ASN ASN A . n A 1 155 LYS 155 153 153 LYS LYS A . n A 1 156 ASN 156 154 154 ASN ASN A . n A 1 157 SER 157 155 155 SER SER A . n A 1 158 THR 158 156 156 THR THR A . n A 1 159 ASN 159 157 157 ASN ASN A . n A 1 160 LYS 160 158 158 LYS LYS A . n A 1 161 SER 161 159 159 SER SER A . n A 1 162 ILE 162 160 160 ILE ILE A . n A 1 163 VAL 163 161 161 VAL VAL A . n A 1 164 LEU 164 162 162 LEU LEU A . n A 1 165 ASN 165 163 163 ASN ASN A . n A 1 166 THR 166 164 164 THR THR A . n A 1 167 GLN 167 165 165 GLN GLN A . n A 1 168 SER 168 166 166 SER SER A . n A 1 169 PHE 169 167 167 PHE PHE A . n A 1 170 THR 170 168 168 THR THR A . n A 1 171 PHE 171 169 169 PHE PHE A . n A 1 172 GLU 172 170 170 GLU GLU A . n A 1 173 GLU 173 171 171 GLU GLU A . n A 1 174 VAL 174 172 172 VAL VAL A . n A 1 175 GLU 175 173 173 GLU GLU A . n A 1 176 TYR 176 174 174 TYR TYR A . n A 1 177 LEU 177 175 175 LEU LEU A . n A 1 178 VAL 178 176 176 VAL VAL A . n A 1 179 LYS 179 177 177 LYS LYS A . n A 1 180 GLY 180 178 178 GLY GLY A . n A 1 181 LEU 181 179 179 LEU LEU A . n A 1 182 ARG 182 180 180 ARG ARG A . n A 1 183 ASN 183 181 181 ASN ASN A . n A 1 184 LYS 184 182 182 LYS LYS A . n A 1 185 PHE 185 183 183 PHE PHE A . n A 1 186 GLN 186 184 184 GLN GLN A . n A 1 187 LEU 187 185 185 LEU LEU A . n A 1 188 ASN 188 186 186 ASN ASN A . n A 1 189 CYS 189 187 187 CYS CYS A . n A 1 190 TYR 190 188 188 TYR TYR A . n A 1 191 VAL 191 189 189 VAL VAL A . n A 1 192 LYS 192 190 190 LYS LYS A . n A 1 193 ILE 193 191 191 ILE ILE A . n A 1 194 ASN 194 192 192 ASN ASN A . n A 1 195 LYS 195 193 193 LYS LYS A . n A 1 196 ASN 196 194 194 ASN ASN A . n A 1 197 LYS 197 195 195 LYS LYS A . n A 1 198 PRO 198 196 196 PRO PRO A . n A 1 199 ILE 199 197 197 ILE ILE A . n A 1 200 ILE 200 198 198 ILE ILE A . n A 1 201 TYR 201 199 199 TYR TYR A . n A 1 202 ILE 202 200 200 ILE ILE A . n A 1 203 ASP 203 201 201 ASP ASP A . n A 1 204 SER 204 202 202 SER SER A . n A 1 205 MET 205 203 203 MET MET A . n A 1 206 SER 206 204 204 SER SER A . n A 1 207 TYR 207 205 205 TYR TYR A . n A 1 208 LEU 208 206 206 LEU LEU A . n A 1 209 ILE 209 207 207 ILE ILE A . n A 1 210 PHE 210 208 208 PHE PHE A . n A 1 211 TYR 211 209 209 TYR TYR A . n A 1 212 ASN 212 210 210 ASN ASN A . n A 1 213 LEU 213 211 211 LEU LEU A . n A 1 214 ILE 214 212 212 ILE ILE A . n A 1 215 LYS 215 213 213 LYS LYS A . n A 1 216 PRO 216 214 214 PRO PRO A . n A 1 217 TYR 217 215 215 TYR TYR A . n A 1 218 LEU 218 216 216 LEU LEU A . n A 1 219 ILE 219 217 217 ILE ILE A . n A 1 220 PRO 220 218 218 PRO PRO A . n A 1 221 GLN 221 219 219 GLN GLN A . n A 1 222 MET 222 220 220 MET MET A . n A 1 223 MET 223 221 221 MET MET A . n A 1 224 TYR 224 222 222 TYR TYR A . n A 1 225 LYS 225 223 223 LYS LYS A . n A 1 226 LEU 226 224 224 LEU LEU A . n A 1 227 PRO 227 225 225 PRO PRO A . n A 1 228 ASN 228 226 ? ? ? A . n A 1 229 THR 229 227 ? ? ? A . n A 1 230 ILE 230 228 ? ? ? A . n A 1 231 SER 231 229 ? ? ? A . n A 1 232 SER 232 230 ? ? ? A . n A 1 233 GLU 233 231 ? ? ? A . n A 1 234 THR 234 232 ? ? ? A . n A 1 235 PHE 235 233 ? ? ? A . n A 1 236 LEU 236 234 ? ? ? A . n A 1 237 LYS 237 235 ? ? ? A . n B 2 1 DC 1 1 ? ? ? C . n B 2 2 DA 2 2 2 DA DA C . n B 2 3 DC 3 3 3 DC DC C . n B 2 4 DG 4 4 4 DG DG C . n B 2 5 DC 5 5 5 DC DC C . n B 2 6 DT 6 6 6 DT DT C . n B 2 7 DA 7 7 7 DA DA C . n B 2 8 DG 8 8 8 DG DG C . n B 2 9 DG 9 9 9 DG DG C . n B 2 10 DG 10 10 10 DG DG C . n B 2 11 DA 11 11 11 DA DA C . n B 2 12 DT 12 12 12 DT DT C . n B 2 13 DA 13 13 13 DA DA C . n B 2 14 DA 14 14 14 DA DA C . n B 2 15 DC 15 15 15 DC DC C . n B 2 16 DC 16 16 16 DC DC C . n B 2 17 DG 17 17 17 DG DG C . n B 2 18 DG 18 18 18 DG DG C . n B 2 19 DG 19 19 19 DG DG C . n B 2 20 DT 20 20 20 DT DT C . n B 2 21 DA 21 21 21 DA DA C . n B 2 22 DA 22 22 22 DA DA C . n B 2 23 DT 23 23 23 DT DT C . n B 2 24 DA 24 24 24 DA DA C . n B 2 25 DC 25 25 25 DC DC C . n C 3 1 DG 1 1 ? ? ? D . n C 3 2 DG 2 2 2 DG DG D . n C 3 3 DT 3 3 3 DT DT D . n C 3 4 DA 4 4 4 DA DA D . n C 3 5 DT 5 5 5 DT DT D . n C 3 6 DT 6 6 6 DT DT D . n C 3 7 DA 7 7 7 DA DA D . n C 3 8 DC 8 8 8 DC DC D . n C 3 9 DC 9 9 9 DC DC D . n C 3 10 DC 10 10 10 DC DC D . n C 3 11 DG 11 11 11 DG DG D . n C 3 12 DG 12 12 12 DG DG D . n C 3 13 DT 13 13 13 DT DT D . n C 3 14 DT 14 14 14 DT DT D . n C 3 15 DA 15 15 15 DA DA D . n C 3 16 DT 16 16 16 DT DT D . n C 3 17 DC 17 17 17 DC DC D . n C 3 18 DC 18 18 18 DC DC D . n C 3 19 DC 19 19 19 DC DC D . n C 3 20 DT 20 20 20 DT DT D . n C 3 21 DA 21 21 21 DA DA D . n C 3 22 DG 22 22 22 DG DG D . n C 3 23 DC 23 23 23 DC DC D . n C 3 24 DG 24 24 24 DG DG D . n C 3 25 DT 25 25 25 DT DT D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 236 1 CA CA A . E 4 CA 1 237 1 CA CA A . F 4 CA 1 26 1 CA CA C . G 5 HOH 1 238 2 HOH HOH A . G 5 HOH 2 239 3 HOH HOH A . G 5 HOH 3 240 4 HOH HOH A . G 5 HOH 4 241 5 HOH HOH A . G 5 HOH 5 242 6 HOH HOH A . G 5 HOH 6 243 7 HOH HOH A . G 5 HOH 7 244 8 HOH HOH A . G 5 HOH 8 245 9 HOH HOH A . G 5 HOH 9 246 11 HOH HOH A . G 5 HOH 10 247 14 HOH HOH A . G 5 HOH 11 248 18 HOH HOH A . G 5 HOH 12 249 25 HOH HOH A . G 5 HOH 13 250 26 HOH HOH A . G 5 HOH 14 251 27 HOH HOH A . G 5 HOH 15 252 28 HOH HOH A . G 5 HOH 16 253 29 HOH HOH A . G 5 HOH 17 254 31 HOH HOH A . G 5 HOH 18 255 33 HOH HOH A . G 5 HOH 19 256 36 HOH HOH A . H 5 HOH 1 27 1 HOH HOH C . H 5 HOH 2 28 10 HOH HOH C . H 5 HOH 3 29 12 HOH HOH C . H 5 HOH 4 30 13 HOH HOH C . H 5 HOH 5 31 15 HOH HOH C . H 5 HOH 6 32 32 HOH HOH C . H 5 HOH 7 33 21 HOH HOH C . H 5 HOH 8 34 34 HOH HOH C . H 5 HOH 9 35 35 HOH HOH C . I 5 HOH 1 26 16 HOH HOH D . I 5 HOH 2 27 17 HOH HOH D . I 5 HOH 3 28 19 HOH HOH D . I 5 HOH 4 29 20 HOH HOH D . I 5 HOH 5 30 30 HOH HOH D . I 5 HOH 6 31 22 HOH HOH D . I 5 HOH 7 32 23 HOH HOH D . I 5 HOH 8 33 24 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7720 ? 1 MORE -81 ? 1 'SSA (A^2)' 16340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLY 45 ? A GLY 43 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 OD1 ? A ASP 46 ? A ASP 44 ? 1_555 78.4 ? 2 O ? A GLY 45 ? A GLY 43 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 OD1 ? A ASP 147 ? A ASP 145 ? 1_555 84.0 ? 3 OD1 ? A ASP 46 ? A ASP 44 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 OD1 ? A ASP 147 ? A ASP 145 ? 1_555 63.5 ? 4 O ? A GLY 45 ? A GLY 43 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 O ? G HOH . ? A HOH 253 ? 1_555 70.8 ? 5 OD1 ? A ASP 46 ? A ASP 44 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 O ? G HOH . ? A HOH 253 ? 1_555 134.8 ? 6 OD1 ? A ASP 147 ? A ASP 145 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 O ? G HOH . ? A HOH 253 ? 1_555 80.8 ? 7 O ? A GLY 45 ? A GLY 43 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 OP2 ? B DC 15 ? C DC 15 ? 1_555 85.3 ? 8 OD1 ? A ASP 46 ? A ASP 44 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 OP2 ? B DC 15 ? C DC 15 ? 1_555 61.0 ? 9 OD1 ? A ASP 147 ? A ASP 145 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 OP2 ? B DC 15 ? C DC 15 ? 1_555 124.5 ? 10 O ? G HOH . ? A HOH 253 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 OP2 ? B DC 15 ? C DC 15 ? 1_555 143.6 ? 11 O ? A GLY 45 ? A GLY 43 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 O ? I HOH . ? D HOH 31 ? 1_555 149.0 ? 12 OD1 ? A ASP 46 ? A ASP 44 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 O ? I HOH . ? D HOH 31 ? 1_555 89.6 ? 13 OD1 ? A ASP 147 ? A ASP 145 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 O ? I HOH . ? D HOH 31 ? 1_555 65.0 ? 14 O ? G HOH . ? A HOH 253 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 O ? I HOH . ? D HOH 31 ? 1_555 100.1 ? 15 OP2 ? B DC 15 ? C DC 15 ? 1_555 CA ? E CA . ? A CA 237 ? 1_555 O ? I HOH . ? D HOH 31 ? 1_555 113.9 ? 16 OD2 ? A ASP 46 ? A ASP 44 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 O ? A ASP 146 ? A ASP 144 ? 1_555 86.8 ? 17 OD2 ? A ASP 46 ? A ASP 44 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 O ? G HOH . ? A HOH 243 ? 1_555 151.4 ? 18 O ? A ASP 146 ? A ASP 144 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 O ? G HOH . ? A HOH 243 ? 1_555 70.1 ? 19 OD2 ? A ASP 46 ? A ASP 44 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 OP1 ? B DA 14 ? C DA 14 ? 1_555 91.4 ? 20 O ? A ASP 146 ? A ASP 144 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 OP1 ? B DA 14 ? C DA 14 ? 1_555 159.1 ? 21 O ? G HOH . ? A HOH 243 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 OP1 ? B DA 14 ? C DA 14 ? 1_555 104.1 ? 22 OD2 ? A ASP 46 ? A ASP 44 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 OP1 ? C DC 17 ? D DC 17 ? 1_555 112.8 ? 23 O ? A ASP 146 ? A ASP 144 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 OP1 ? C DC 17 ? D DC 17 ? 1_555 104.3 ? 24 O ? G HOH . ? A HOH 243 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 OP1 ? C DC 17 ? D DC 17 ? 1_555 89.9 ? 25 OP1 ? B DA 14 ? C DA 14 ? 1_555 CA ? D CA . ? A CA 236 ? 1_555 OP1 ? C DC 17 ? D DC 17 ? 1_555 95.6 ? 26 OP1 ? B DC 15 ? C DC 15 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 O ? H HOH . ? C HOH 31 ? 1_555 85.6 ? 27 OP1 ? B DC 15 ? C DC 15 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 O ? H HOH . ? C HOH 33 ? 1_555 93.7 ? 28 O ? H HOH . ? C HOH 31 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 O ? H HOH . ? C HOH 33 ? 1_555 72.7 ? 29 OP1 ? B DC 15 ? C DC 15 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 OP1 ? C DT 16 ? D DT 16 ? 1_555 97.0 ? 30 O ? H HOH . ? C HOH 31 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 OP1 ? C DT 16 ? D DT 16 ? 1_555 177.3 ? 31 O ? H HOH . ? C HOH 33 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 OP1 ? C DT 16 ? D DT 16 ? 1_555 106.4 ? 32 OP1 ? B DC 15 ? C DC 15 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 O ? I HOH . ? D HOH 29 ? 1_555 100.1 ? 33 O ? H HOH . ? C HOH 31 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 O ? I HOH . ? D HOH 29 ? 1_555 91.8 ? 34 O ? H HOH . ? C HOH 33 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 O ? I HOH . ? D HOH 29 ? 1_555 158.4 ? 35 OP1 ? C DT 16 ? D DT 16 ? 1_555 CA ? F CA . ? C CA 26 ? 1_555 O ? I HOH . ? D HOH 29 ? 1_555 88.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' audit_author 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_initial_refinement_model 7 5 'Structure model' pdbx_struct_conn_angle 8 5 'Structure model' struct_conn 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_audit_author.name' 11 5 'Structure model' '_database_2.pdbx_DOI' 12 5 'Structure model' '_database_2.pdbx_database_accession' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 28 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 29 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 30 5 'Structure model' '_pdbx_struct_conn_angle.value' 31 5 'Structure model' '_struct_conn.pdbx_dist_value' 32 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 33 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 34 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 37 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 38 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 39 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 40 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 41 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 42 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 43 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 44 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 45 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 46 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 47 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 48 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 25.5350 17.9475 -13.8270 0.0968 0.1773 0.2885 -0.0185 -0.0522 0.0639 3.4293 3.8853 8.3174 1.4138 -3.8136 -2.4742 0.0291 -0.1527 0.1236 -0.0682 -0.2491 -0.0194 -0.5114 0.1739 0.3802 'X-RAY DIFFRACTION' 2 ? refined 25.0314 16.3866 -14.1068 0.1661 0.1520 0.2749 -0.0404 -0.0412 0.0390 3.0471 3.4316 5.2612 0.6056 -2.2935 -2.4512 0.0043 -0.2383 0.2340 -0.1561 -0.1001 -0.2788 -0.4352 0.1269 0.5112 'X-RAY DIFFRACTION' 3 ? refined 16.1386 25.8634 -8.3828 0.1118 0.2097 0.2270 -0.0355 -0.0667 -0.0054 2.4756 1.9806 4.2273 -0.3358 -0.9218 -1.1174 0.0961 -0.0278 -0.0682 -0.1307 0.0312 0.1050 0.0614 -0.4119 -0.0707 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 C 2 C 25 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 D 2 D 25 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 3 A 225 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.5.0088 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DC 3 ? ? "C1'" C DC 3 ? ? N1 C DC 3 ? ? 110.53 108.30 2.23 0.30 N 2 1 "O4'" C DG 17 ? ? "C1'" C DG 17 ? ? N9 C DG 17 ? ? 111.12 108.30 2.82 0.30 N 3 1 "O4'" D DT 5 ? ? "C1'" D DT 5 ? ? N1 D DT 5 ? ? 110.87 108.30 2.57 0.30 N 4 1 "O4'" D DC 10 ? ? "C1'" D DC 10 ? ? N1 D DC 10 ? ? 110.11 108.30 1.81 0.30 N 5 1 "O4'" D DA 15 ? ? "C1'" D DA 15 ? ? N9 D DA 15 ? ? 101.83 108.00 -6.17 0.70 N 6 1 "C3'" D DA 15 ? ? "O3'" D DA 15 ? ? P D DT 16 ? ? 128.63 119.70 8.93 1.20 Y 7 1 "O4'" D DC 18 ? ? "C1'" D DC 18 ? ? N1 D DC 18 ? ? 111.14 108.30 2.84 0.30 N 8 1 "O4'" D DT 20 ? ? "C1'" D DT 20 ? ? N1 D DT 20 ? ? 110.10 108.30 1.80 0.30 N 9 1 "O4'" D DG 22 ? ? "C1'" D DG 22 ? ? N9 D DG 22 ? ? 110.49 108.30 2.19 0.30 N 10 1 "O4'" D DT 25 ? ? "C1'" D DT 25 ? ? N1 D DT 25 ? ? 110.14 108.30 1.84 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 51 ? ? -76.76 -166.87 2 1 GLU A 52 ? ? -94.23 38.07 3 1 TYR A 132 ? ? -133.09 -36.01 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A HIS 0 ? A HIS 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A LYS 2 ? A LYS 4 5 1 Y 1 A ASN 226 ? A ASN 228 6 1 Y 1 A THR 227 ? A THR 229 7 1 Y 1 A ILE 228 ? A ILE 230 8 1 Y 1 A SER 229 ? A SER 231 9 1 Y 1 A SER 230 ? A SER 232 10 1 Y 1 A GLU 231 ? A GLU 233 11 1 Y 1 A THR 232 ? A THR 234 12 1 Y 1 A PHE 233 ? A PHE 235 13 1 Y 1 A LEU 234 ? A LEU 236 14 1 Y 1 A LYS 235 ? A LYS 237 15 1 Y 1 C DC 1 ? B DC 1 16 1 Y 1 D DG 1 ? C DG 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 MET N N N N 374 MET CA C N S 375 MET C C N N 376 MET O O N N 377 MET CB C N N 378 MET CG C N N 379 MET SD S N N 380 MET CE C N N 381 MET OXT O N N 382 MET H H N N 383 MET H2 H N N 384 MET HA H N N 385 MET HB2 H N N 386 MET HB3 H N N 387 MET HG2 H N N 388 MET HG3 H N N 389 MET HE1 H N N 390 MET HE2 H N N 391 MET HE3 H N N 392 MET HXT H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3OOL 'double helix' 3OOL 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 2 1_555 C DT 25 1_555 -0.330 0.053 0.307 -16.791 7.827 8.522 1 C_DA2:DT25_D C 2 ? D 25 ? 20 1 1 B DC 3 1_555 C DG 24 1_555 0.649 -0.277 0.474 -4.483 2.101 1.090 2 C_DC3:DG24_D C 3 ? D 24 ? 19 1 1 B DG 4 1_555 C DC 23 1_555 -0.534 -0.261 0.444 0.646 -19.821 -4.188 3 C_DG4:DC23_D C 4 ? D 23 ? 19 1 1 B DC 5 1_555 C DG 22 1_555 0.168 0.146 0.484 -12.835 -6.172 2.576 4 C_DC5:DG22_D C 5 ? D 22 ? 19 1 1 B DT 6 1_555 C DA 21 1_555 -0.180 -0.178 0.215 -0.612 -16.211 6.064 5 C_DT6:DA21_D C 6 ? D 21 ? 20 1 1 B DA 7 1_555 C DT 20 1_555 -0.440 -0.272 0.313 2.935 -12.480 -2.377 6 C_DA7:DT20_D C 7 ? D 20 ? 20 1 1 B DG 8 1_555 C DC 19 1_555 -0.199 -0.190 0.212 4.663 -4.621 -1.562 7 C_DG8:DC19_D C 8 ? D 19 ? 19 1 1 B DG 9 1_555 C DC 18 1_555 -0.037 0.235 0.190 2.860 -14.363 8.651 8 C_DG9:DC18_D C 9 ? D 18 ? ? 1 1 B DG 10 1_555 C DC 17 1_555 -0.276 -0.253 -0.213 8.936 -7.971 3.600 9 C_DG10:DC17_D C 10 ? D 17 ? 19 1 1 B DA 11 1_555 C DT 16 1_555 -0.109 -0.116 0.192 9.207 -24.921 2.783 10 C_DA11:DT16_D C 11 ? D 16 ? 20 1 1 B DT 12 1_555 C DA 15 1_555 -0.637 -0.192 0.729 -14.863 -36.595 -3.589 11 C_DT12:DA15_D C 12 ? D 15 ? 20 1 1 B DA 13 1_555 C DT 14 1_555 0.081 -0.049 -0.055 -12.068 -14.994 4.639 12 C_DA13:DT14_D C 13 ? D 14 ? 20 1 1 B DA 14 1_555 C DT 13 1_555 -0.048 -0.121 0.190 -9.933 -14.257 6.757 13 C_DA14:DT13_D C 14 ? D 13 ? 20 1 1 B DC 15 1_555 C DG 12 1_555 0.435 -0.060 -0.173 9.722 -14.363 -2.269 14 C_DC15:DG12_D C 15 ? D 12 ? 19 1 1 B DC 16 1_555 C DG 11 1_555 0.360 -0.171 0.076 -4.131 -10.861 1.738 15 C_DC16:DG11_D C 16 ? D 11 ? 19 1 1 B DG 17 1_555 C DC 10 1_555 -0.320 -0.211 0.331 14.256 -4.078 2.233 16 C_DG17:DC10_D C 17 ? D 10 ? 19 1 1 B DG 18 1_555 C DC 9 1_555 0.048 -0.312 0.516 8.136 -14.621 -0.986 17 C_DG18:DC9_D C 18 ? D 9 ? 19 1 1 B DG 19 1_555 C DC 8 1_555 -0.096 -0.239 0.393 -1.981 -12.793 -4.047 18 C_DG19:DC8_D C 19 ? D 8 ? 19 1 1 B DT 20 1_555 C DA 7 1_555 0.487 0.020 0.481 -1.202 -14.473 5.805 19 C_DT20:DA7_D C 20 ? D 7 ? 20 1 1 B DA 21 1_555 C DT 6 1_555 -0.506 -0.084 0.332 6.275 -14.795 7.972 20 C_DA21:DT6_D C 21 ? D 6 ? 20 1 1 B DA 22 1_555 C DT 5 1_555 0.015 -0.073 -0.039 -4.222 -15.309 11.433 21 C_DA22:DT5_D C 22 ? D 5 ? 20 1 1 B DT 23 1_555 C DA 4 1_555 -0.118 -0.119 -0.047 -1.403 -0.776 3.723 22 C_DT23:DA4_D C 23 ? D 4 ? 20 1 1 B DA 24 1_555 C DT 3 1_555 0.565 -0.196 0.092 -2.367 -5.944 -0.803 23 C_DA24:DT3_D C 24 ? D 3 ? 20 1 1 B DC 25 1_555 C DG 2 1_555 0.794 -0.043 -0.274 14.902 1.710 5.446 24 C_DC25:DG2_D C 25 ? D 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 2 1_555 C DT 25 1_555 B DC 3 1_555 C DG 24 1_555 -0.534 0.007 3.178 -0.726 3.017 27.676 -0.689 0.939 3.173 6.282 1.511 27.846 1 CC_DA2DC3:DG24DT25_DD C 2 ? D 25 ? C 3 ? D 24 ? 1 B DC 3 1_555 C DG 24 1_555 B DG 4 1_555 C DC 23 1_555 -1.551 0.722 3.173 -3.228 -3.615 36.881 1.604 2.011 3.210 -5.685 5.075 37.187 2 CC_DC3DG4:DC23DG24_DD C 3 ? D 24 ? C 4 ? D 23 ? 1 B DG 4 1_555 C DC 23 1_555 B DC 5 1_555 C DG 22 1_555 1.345 0.272 3.705 3.362 -7.576 43.545 1.167 -1.427 3.699 -10.103 -4.483 44.289 3 CC_DG4DC5:DG22DC23_DD C 4 ? D 23 ? C 5 ? D 22 ? 1 B DC 5 1_555 C DG 22 1_555 B DT 6 1_555 C DA 21 1_555 -0.704 0.650 3.132 3.305 7.159 22.665 -0.692 2.736 3.058 17.548 -8.102 23.981 4 CC_DC5DT6:DA21DG22_DD C 5 ? D 22 ? C 6 ? D 21 ? 1 B DT 6 1_555 C DA 21 1_555 B DA 7 1_555 C DT 20 1_555 -0.030 2.279 3.214 -0.610 -10.674 49.421 3.365 -0.005 2.699 -12.597 0.719 50.493 5 CC_DT6DA7:DT20DA21_DD C 6 ? D 21 ? C 7 ? D 20 ? 1 B DA 7 1_555 C DT 20 1_555 B DG 8 1_555 C DC 19 1_555 0.099 -0.239 3.295 -1.763 6.245 29.039 -1.773 -0.561 3.164 12.262 3.462 29.740 6 CC_DA7DG8:DC19DT20_DD C 7 ? D 20 ? C 8 ? D 19 ? 1 B DG 8 1_555 C DC 19 1_555 B DG 9 1_555 C DC 18 1_555 0.397 -0.320 3.374 -0.467 4.570 40.734 -0.969 -0.619 3.316 6.541 0.668 40.981 7 CC_DG8DG9:DC18DC19_DD C 8 ? D 19 ? C 9 ? D 18 ? 1 B DG 9 1_555 C DC 18 1_555 B DG 10 1_555 C DC 17 1_555 -0.465 0.630 3.217 3.591 5.963 26.712 -0.128 1.848 3.191 12.636 -7.610 27.588 8 CC_DG9DG10:DC17DC18_DD C 9 ? D 18 ? C 10 ? D 17 ? 1 B DG 10 1_555 C DC 17 1_555 B DA 11 1_555 C DT 16 1_555 -0.602 1.598 3.337 -3.112 2.993 39.287 1.996 0.508 3.480 4.435 4.612 39.514 9 CC_DG10DA11:DT16DC17_DD C 10 ? D 17 ? C 11 ? D 16 ? 1 B DA 11 1_555 C DT 16 1_555 B DT 12 1_555 C DA 15 1_555 -0.084 -0.118 3.810 -2.149 -9.450 37.548 1.179 -0.181 3.730 -14.389 3.272 38.735 10 CC_DA11DT12:DA15DT16_DD C 11 ? D 16 ? C 12 ? D 15 ? 1 B DT 12 1_555 C DA 15 1_555 B DA 13 1_555 C DT 14 1_555 0.356 2.741 3.528 6.260 -18.983 55.500 3.745 -0.050 2.570 -19.688 -6.492 58.719 11 CC_DT12DA13:DT14DA15_DD C 12 ? D 15 ? C 13 ? D 14 ? 1 B DA 13 1_555 C DT 14 1_555 B DA 14 1_555 C DT 13 1_555 0.654 -0.188 3.329 -3.654 2.053 27.214 -0.898 -2.273 3.193 4.329 7.708 27.529 12 CC_DA13DA14:DT13DT14_DD C 13 ? D 14 ? C 14 ? D 13 ? 1 B DA 14 1_555 C DT 13 1_555 B DC 15 1_555 C DG 12 1_555 -1.109 -0.277 2.980 4.889 -0.634 33.668 -0.384 2.588 2.800 -1.088 -8.385 34.017 13 CC_DA14DC15:DG12DT13_DD C 14 ? D 13 ? C 15 ? D 12 ? 1 B DC 15 1_555 C DG 12 1_555 B DC 16 1_555 C DG 11 1_555 1.261 -0.278 3.541 3.975 6.135 37.646 -1.266 -1.375 3.564 9.398 -6.089 38.324 14 CC_DC15DC16:DG11DG12_DD C 15 ? D 12 ? C 16 ? D 11 ? 1 B DC 16 1_555 C DG 11 1_555 B DG 17 1_555 C DC 10 1_555 0.286 0.221 2.993 -1.969 8.104 26.681 -1.322 -1.024 2.904 17.039 4.141 27.931 15 CC_DC16DG17:DC10DG11_DD C 16 ? D 11 ? C 17 ? D 10 ? 1 B DG 17 1_555 C DC 10 1_555 B DG 18 1_555 C DC 9 1_555 -0.463 -0.447 3.465 -2.844 -1.171 41.842 -0.494 0.331 3.499 -1.637 3.975 41.950 16 CC_DG17DG18:DC9DC10_DD C 17 ? D 10 ? C 18 ? D 9 ? 1 B DG 18 1_555 C DC 9 1_555 B DG 19 1_555 C DC 8 1_555 -0.788 -0.778 3.483 -0.429 0.746 30.841 -1.617 1.392 3.475 1.402 0.807 30.853 17 CC_DG18DG19:DC8DC9_DD C 18 ? D 9 ? C 19 ? D 8 ? 1 B DG 19 1_555 C DC 8 1_555 B DT 20 1_555 C DA 7 1_555 0.401 -0.100 3.423 0.091 -0.123 35.633 -0.144 -0.642 3.424 -0.201 -0.149 35.633 18 CC_DG19DT20:DA7DC8_DD C 19 ? D 8 ? C 20 ? D 7 ? 1 B DT 20 1_555 C DA 7 1_555 B DA 21 1_555 C DT 6 1_555 0.428 2.128 3.237 3.152 -8.942 42.062 3.718 -0.294 2.773 -12.272 -4.326 43.070 19 CC_DT20DA21:DT6DA7_DD C 20 ? D 7 ? C 21 ? D 6 ? 1 B DA 21 1_555 C DT 6 1_555 B DA 22 1_555 C DT 5 1_555 -0.018 0.327 3.774 -3.449 18.611 32.102 -2.443 -0.519 3.437 30.565 5.664 37.139 20 CC_DA21DA22:DT5DT6_DD C 21 ? D 6 ? C 22 ? D 5 ? 1 B DA 22 1_555 C DT 5 1_555 B DT 23 1_555 C DA 4 1_555 -1.064 -0.756 3.321 0.451 7.054 31.167 -2.639 2.014 3.066 12.921 -0.826 31.939 21 CC_DA22DT23:DA4DT5_DD C 22 ? D 5 ? C 23 ? D 4 ? 1 B DT 23 1_555 C DA 4 1_555 B DA 24 1_555 C DT 3 1_555 -0.110 -0.438 3.351 0.912 2.572 37.413 -1.024 0.293 3.311 4.003 -1.419 37.509 22 CC_DT23DA24:DT3DA4_DD C 23 ? D 4 ? C 24 ? D 3 ? 1 B DA 24 1_555 C DT 3 1_555 B DC 25 1_555 C DG 2 1_555 0.753 -0.392 2.985 3.014 3.787 27.472 -1.643 -0.904 2.969 7.896 -6.284 27.887 23 CC_DA24DC25:DG2DT3_DD C 24 ? D 3 ? C 25 ? D 2 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1R7M _pdbx_initial_refinement_model.details 'PDB entry 1R7M' #