data_3OVN # _entry.id 3OVN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3OVN pdb_00003ovn 10.2210/pdb3ovn/pdb RCSB RCSB061630 ? ? WWPDB D_1000061630 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3l3u 'HIV-1 integrase core domain' unspecified PDB 3AO1 . unspecified PDB 3AO2 . unspecified PDB 3AO3 . unspecified PDB 3AO4 . unspecified PDB 3AO5 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3OVN _pdbx_database_status.recvd_initial_deposition_date 2010-09-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wielens, J.' 1 'Chalmers, D.K.' 2 'Headey, S.J.' 3 'Deadman, J.J.' 4 'Rhodes, D.K.' 5 'Parker, M.W.' 6 'Scanlon, M.J.' 7 # _citation.id primary _citation.title 'Fragment-based design of ligands targeting a novel site on the integrase enzyme of human immunodeficiency virus 1' _citation.journal_abbrev Chemmedchem _citation.journal_volume 6 _citation.page_first 258 _citation.page_last 261 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country DE _citation.journal_id_ISSN 1860-7179 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21275048 _citation.pdbx_database_id_DOI 10.1002/cmdc.201000483 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wielens, J.' 1 ? primary 'Headey, S.J.' 2 ? primary 'Deadman, J.J.' 3 ? primary 'Rhodes, D.I.' 4 ? primary 'Parker, M.W.' 5 ? primary 'Chalmers, D.K.' 6 ? primary 'Scanlon, M.J.' 7 ? # _cell.entry_id 3OVN _cell.length_a 59.750 _cell.length_b 59.704 _cell.length_c 81.818 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3OVN _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'POL polyprotein' 17802.174 2 ? 'C56S, W131D, F139D, F185H' 'Integrase CATALYTIC CORE DOMAIN, 765-927' ? 2 branched man 'beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose' 342.297 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 non-polymer syn '1-methyl-3-(thiophen-2-yl)-1H-pyrazol-5-amine' 179.242 2 ? ? ? ? 5 non-polymer syn 'CADMIUM ION' 112.411 4 ? ? ? ? 6 water nat water 18.015 57 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name sucrose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHGQVDSSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA CDWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGGIGGYSAGERIVDIIATDIQ TKE ; _entity_poly.pdbx_seq_one_letter_code_can ;MHGQVDSSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA CDWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGGIGGYSAGERIVDIIATDIQ TKE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 GLY n 1 4 GLN n 1 5 VAL n 1 6 ASP n 1 7 SER n 1 8 SER n 1 9 PRO n 1 10 GLY n 1 11 ILE n 1 12 TRP n 1 13 GLN n 1 14 LEU n 1 15 ASP n 1 16 CYS n 1 17 THR n 1 18 HIS n 1 19 LEU n 1 20 GLU n 1 21 GLY n 1 22 LYS n 1 23 VAL n 1 24 ILE n 1 25 LEU n 1 26 VAL n 1 27 ALA n 1 28 VAL n 1 29 HIS n 1 30 VAL n 1 31 ALA n 1 32 SER n 1 33 GLY n 1 34 TYR n 1 35 ILE n 1 36 GLU n 1 37 ALA n 1 38 GLU n 1 39 VAL n 1 40 ILE n 1 41 PRO n 1 42 ALA n 1 43 GLU n 1 44 THR n 1 45 GLY n 1 46 GLN n 1 47 GLU n 1 48 THR n 1 49 ALA n 1 50 TYR n 1 51 PHE n 1 52 LEU n 1 53 LEU n 1 54 LYS n 1 55 LEU n 1 56 ALA n 1 57 GLY n 1 58 ARG n 1 59 TRP n 1 60 PRO n 1 61 VAL n 1 62 LYS n 1 63 THR n 1 64 VAL n 1 65 HIS n 1 66 THR n 1 67 ASP n 1 68 ASN n 1 69 GLY n 1 70 SER n 1 71 ASN n 1 72 PHE n 1 73 THR n 1 74 SER n 1 75 THR n 1 76 THR n 1 77 VAL n 1 78 LYS n 1 79 ALA n 1 80 ALA n 1 81 CYS n 1 82 ASP n 1 83 TRP n 1 84 ALA n 1 85 GLY n 1 86 ILE n 1 87 LYS n 1 88 GLN n 1 89 GLU n 1 90 ASP n 1 91 GLY n 1 92 ILE n 1 93 PRO n 1 94 TYR n 1 95 ASN n 1 96 PRO n 1 97 GLN n 1 98 SER n 1 99 GLN n 1 100 GLY n 1 101 VAL n 1 102 ILE n 1 103 GLU n 1 104 SER n 1 105 MET n 1 106 ASN n 1 107 LYS n 1 108 GLU n 1 109 LEU n 1 110 LYS n 1 111 LYS n 1 112 ILE n 1 113 ILE n 1 114 GLY n 1 115 GLN n 1 116 VAL n 1 117 ARG n 1 118 ASP n 1 119 GLN n 1 120 ALA n 1 121 GLU n 1 122 HIS n 1 123 LEU n 1 124 LYS n 1 125 THR n 1 126 ALA n 1 127 VAL n 1 128 GLN n 1 129 MET n 1 130 ALA n 1 131 VAL n 1 132 PHE n 1 133 ILE n 1 134 HIS n 1 135 ASN n 1 136 HIS n 1 137 LYS n 1 138 ARG n 1 139 LYS n 1 140 GLY n 1 141 GLY n 1 142 ILE n 1 143 GLY n 1 144 GLY n 1 145 TYR n 1 146 SER n 1 147 ALA n 1 148 GLY n 1 149 GLU n 1 150 ARG n 1 151 ILE n 1 152 VAL n 1 153 ASP n 1 154 ILE n 1 155 ILE n 1 156 ALA n 1 157 THR n 1 158 ASP n 1 159 ILE n 1 160 GLN n 1 161 THR n 1 162 LYS n 1 163 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain NL43 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET23B+ _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q72498_9HIV1 _struct_ref.pdbx_db_accession Q72498 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA CWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQ TKE ; _struct_ref.pdbx_align_begin 765 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3OVN A 1 ? 163 ? Q72498 765 ? 927 ? 50 212 2 1 3OVN B 1 ? 163 ? Q72498 765 ? 927 ? 50 212 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3OVN SER A 7 ? UNP Q72498 CYS 771 'engineered mutation' 56 1 1 3OVN ASP A 82 ? UNP Q72498 TRP 846 'engineered mutation' 131 2 1 3OVN ASP A 90 ? UNP Q72498 PHE 854 'engineered mutation' 139 3 1 3OVN HIS A 136 ? UNP Q72498 PHE 900 'engineered mutation' 185 4 2 3OVN SER B 7 ? UNP Q72498 CYS 771 'engineered mutation' 56 5 2 3OVN ASP B 82 ? UNP Q72498 TRP 846 'engineered mutation' 131 6 2 3OVN ASP B 90 ? UNP Q72498 PHE 854 'engineered mutation' 139 7 2 3OVN HIS B 136 ? UNP Q72498 PHE 900 'engineered mutation' 185 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FRU 'D-saccharide, beta linking' . beta-D-fructofuranose 'beta-D-fructose; D-fructose; fructose' 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPV non-polymer . '1-methyl-3-(thiophen-2-yl)-1H-pyrazol-5-amine' ? 'C8 H9 N3 S' 179.242 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3OVN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_percent_sol 39.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details '1.6M AmSO4, 0.1M Na Citrate pH 5.6, 5mM CdCl2, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2007-02-14 _diffrn_detector.details 'K-B pair of biomorph mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator and K-B pair of biomorph mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 3OVN _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.25 _reflns.d_resolution_high 1.95 _reflns.number_obs 21811 _reflns.number_all 23203 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.1 _reflns.pdbx_Rsym_value 0.112 _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate 22.38 _reflns.pdbx_redundancy 4.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.06 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.497 _reflns_shell.pdbx_Rsym_value 0.479 _reflns_shell.meanI_over_sigI_obs 2.9 _reflns_shell.pdbx_redundancy 4.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3184 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3OVN _refine.ls_number_reflns_obs 20602 _refine.ls_number_reflns_all 21811 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.91 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 98.83 _refine.ls_R_factor_obs 0.21278 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21084 _refine.ls_R_factor_R_free 0.24882 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1117 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.923 _refine.B_iso_mean 25.036 _refine.aniso_B[1][1] -0.83 _refine.aniso_B[2][2] 3.24 _refine.aniso_B[3][3] -2.41 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3L3U' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.165 _refine.overall_SU_ML 0.130 _refine.overall_SU_B 4.656 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2168 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 2286 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 40.91 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 2266 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1472 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.174 1.962 ? 3073 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.062 3.000 ? 3615 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.585 5.000 ? 280 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.231 25.054 ? 93 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.860 15.000 ? 379 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.879 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.112 0.200 ? 351 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 2485 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 429 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.189 1.500 ? 1397 'X-RAY DIFFRACTION' ? r_mcbond_other 0.277 1.500 ? 586 'X-RAY DIFFRACTION' ? r_mcangle_it 2.124 2.000 ? 2242 'X-RAY DIFFRACTION' ? r_scbond_it 2.897 3.000 ? 869 'X-RAY DIFFRACTION' ? r_scangle_it 4.472 4.500 ? 831 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 2.001 _refine_ls_shell.number_reflns_R_work 1517 _refine_ls_shell.R_factor_R_work 0.270 _refine_ls_shell.percent_reflns_obs 99.63 _refine_ls_shell.R_factor_R_free 0.305 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 92 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3OVN _struct.title 'Fragment-based approach to the design of ligands targeting a novel site on HIV-1 integrase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OVN _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/TRANSFERASE INHIBITOR' _struct_keywords.text ;DNA INTEGRATION, AIDS, INTEGRASE, ENDONUCLEASE, POLYNUCLEOTIDYL TRANSFERASE, DNA BINDING, VIRAL PROTEIN, RNaseH, FRAGMENT BINDING, VIRAL PROTEIN-TRANSFERASE INHIBITOR complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 3 ? I N N 4 ? J N N 5 ? K N N 5 ? L N N 6 ? M N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 44 ? TRP A 59 ? THR A 93 TRP A 108 1 ? 16 HELX_P HELX_P2 2 GLY A 69 ? SER A 74 ? GLY A 118 SER A 123 1 ? 6 HELX_P HELX_P3 3 SER A 74 ? GLY A 85 ? SER A 123 GLY A 134 1 ? 12 HELX_P HELX_P4 4 GLU A 103 ? ARG A 117 ? GLU A 152 ARG A 166 1 ? 15 HELX_P HELX_P5 5 ASP A 118 ? ALA A 120 ? ASP A 167 ALA A 169 5 ? 3 HELX_P HELX_P6 6 HIS A 122 ? LYS A 137 ? HIS A 171 LYS A 186 1 ? 16 HELX_P HELX_P7 7 ALA A 147 ? ALA A 156 ? ALA A 196 ALA A 205 1 ? 10 HELX_P HELX_P8 8 THR B 44 ? TRP B 59 ? THR B 93 TRP B 108 1 ? 16 HELX_P HELX_P9 9 GLY B 69 ? THR B 73 ? GLY B 118 THR B 122 5 ? 5 HELX_P HELX_P10 10 SER B 74 ? GLY B 85 ? SER B 123 GLY B 134 1 ? 12 HELX_P HELX_P11 11 GLU B 103 ? ARG B 117 ? GLU B 152 ARG B 166 1 ? 15 HELX_P HELX_P12 12 ASP B 118 ? ALA B 120 ? ASP B 167 ALA B 169 5 ? 3 HELX_P HELX_P13 13 HIS B 122 ? LYS B 137 ? HIS B 171 LYS B 186 1 ? 16 HELX_P HELX_P14 14 SER B 146 ? ILE B 159 ? SER B 195 ILE B 208 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C GLC . C1 ? ? ? 1_555 C FRU . O2 ? ? C GLC 1 C FRU 2 1_555 ? ? ? ? ? ? ? 1.444 sing ? metalc1 metalc ? ? A CYS 16 SG ? ? ? 1_555 F CD . CD ? ? A CYS 65 A CD 1003 1_555 ? ? ? ? ? ? ? 2.453 ? ? metalc2 metalc ? ? A CYS 16 SG ? ? ? 1_555 G CD . CD ? ? A CYS 65 A CD 1004 1_555 ? ? ? ? ? ? ? 2.576 ? ? metalc3 metalc ? ? A HIS 18 NE2 ? ? ? 1_555 F CD . CD ? ? A HIS 67 A CD 1003 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc4 metalc ? ? A GLU 43 OE1 ? ? ? 1_555 F CD . CD ? ? A GLU 92 A CD 1003 1_555 ? ? ? ? ? ? ? 1.888 ? ? metalc5 metalc ? ? A GLU 43 OE2 ? ? ? 1_555 G CD . CD ? ? A GLU 92 A CD 1004 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc6 metalc ? ? A ASP 67 OD2 ? ? ? 1_555 G CD . CD ? ? A ASP 116 A CD 1004 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc7 metalc ? ? L HOH . O ? ? ? 1_555 G CD . CD ? ? A HOH 214 A CD 1004 1_555 ? ? ? ? ? ? ? 2.645 ? ? metalc8 metalc ? ? L HOH . O ? ? ? 1_555 F CD . CD ? ? A HOH 217 A CD 1003 1_555 ? ? ? ? ? ? ? 2.059 ? ? metalc9 metalc ? ? M HOH . O ? ? ? 1_555 J CD . CD ? ? B HOH 40 B CD 1001 1_555 ? ? ? ? ? ? ? 2.518 ? ? metalc10 metalc ? ? M HOH . O ? ? ? 1_555 K CD . CD ? ? B HOH 43 B CD 1002 1_555 ? ? ? ? ? ? ? 1.949 ? ? metalc11 metalc ? ? B CYS 16 SG ? ? ? 1_555 J CD . CD ? ? B CYS 65 B CD 1001 1_555 ? ? ? ? ? ? ? 2.637 ? ? metalc12 metalc ? ? B CYS 16 SG ? ? ? 1_555 K CD . CD ? ? B CYS 65 B CD 1002 1_555 ? ? ? ? ? ? ? 2.542 ? ? metalc13 metalc ? ? B HIS 18 NE2 ? ? ? 1_555 K CD . CD ? ? B HIS 67 B CD 1002 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc14 metalc ? ? B GLU 43 OE2 ? ? ? 1_555 J CD . CD ? ? B GLU 92 B CD 1001 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc15 metalc ? ? B GLU 43 OE1 ? ? ? 1_555 K CD . CD ? ? B GLU 92 B CD 1002 1_555 ? ? ? ? ? ? ? 1.841 ? ? metalc16 metalc ? ? B ASP 67 OD2 ? ? ? 1_555 J CD . CD ? ? B ASP 116 B CD 1001 1_555 ? ? ? ? ? ? ? 2.279 ? ? metalc17 metalc ? ? M HOH . O ? ? ? 1_555 J CD . CD ? ? B HOH 214 B CD 1001 1_555 ? ? ? ? ? ? ? 2.609 ? ? metalc18 metalc ? ? M HOH . O ? ? ? 1_555 J CD . CD ? ? B HOH 217 B CD 1001 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc19 metalc ? ? M HOH . O ? ? ? 1_555 K CD . CD ? ? B HOH 217 B CD 1002 1_555 ? ? ? ? ? ? ? 1.930 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 35 ? ILE A 40 ? ILE A 84 ILE A 89 A 2 LYS A 22 ? HIS A 29 ? LYS A 71 HIS A 78 A 3 ILE A 11 ? LEU A 19 ? ILE A 60 LEU A 68 A 4 THR A 63 ? THR A 66 ? THR A 112 THR A 115 A 5 LYS A 87 ? ASP A 90 ? LYS A 136 ASP A 139 B 1 ARG A 138 ? LYS A 139 ? ARG A 187 LYS A 188 B 2 TYR A 145 ? SER A 146 ? TYR A 194 SER A 195 C 1 TYR B 34 ? ILE B 40 ? TYR B 83 ILE B 89 C 2 LYS B 22 ? HIS B 29 ? LYS B 71 HIS B 78 C 3 ILE B 11 ? LEU B 19 ? ILE B 60 LEU B 68 C 4 THR B 63 ? HIS B 65 ? THR B 112 HIS B 114 C 5 LYS B 87 ? GLU B 89 ? LYS B 136 GLU B 138 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 40 ? O ILE A 89 N VAL A 23 ? N VAL A 72 A 2 3 O ILE A 24 ? O ILE A 73 N THR A 17 ? N THR A 66 A 3 4 N LEU A 14 ? N LEU A 63 O HIS A 65 ? O HIS A 114 A 4 5 N VAL A 64 ? N VAL A 113 O GLU A 89 ? O GLU A 138 B 1 2 N LYS A 139 ? N LYS A 188 O TYR A 145 ? O TYR A 194 C 1 2 O GLU B 36 ? O GLU B 85 N ALA B 27 ? N ALA B 76 C 2 3 O VAL B 26 ? O VAL B 75 N ASP B 15 ? N ASP B 64 C 3 4 N LEU B 14 ? N LEU B 63 O HIS B 65 ? O HIS B 114 C 4 5 N VAL B 64 ? N VAL B 113 O LYS B 87 ? O LYS B 136 # _database_PDB_matrix.entry_id 3OVN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3OVN _atom_sites.fract_transf_matrix[1][1] 0.016736 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016749 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012222 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 50 ? ? ? A . n A 1 2 HIS 2 51 ? ? ? A . n A 1 3 GLY 3 52 ? ? ? A . n A 1 4 GLN 4 53 ? ? ? A . n A 1 5 VAL 5 54 ? ? ? A . n A 1 6 ASP 6 55 ? ? ? A . n A 1 7 SER 7 56 56 SER SER A . n A 1 8 SER 8 57 57 SER SER A . n A 1 9 PRO 9 58 58 PRO PRO A . n A 1 10 GLY 10 59 59 GLY GLY A . n A 1 11 ILE 11 60 60 ILE ILE A . n A 1 12 TRP 12 61 61 TRP TRP A . n A 1 13 GLN 13 62 62 GLN GLN A . n A 1 14 LEU 14 63 63 LEU LEU A . n A 1 15 ASP 15 64 64 ASP ASP A . n A 1 16 CYS 16 65 65 CYS CYS A . n A 1 17 THR 17 66 66 THR THR A . n A 1 18 HIS 18 67 67 HIS HIS A . n A 1 19 LEU 19 68 68 LEU LEU A . n A 1 20 GLU 20 69 69 GLU GLU A . n A 1 21 GLY 21 70 70 GLY GLY A . n A 1 22 LYS 22 71 71 LYS LYS A . n A 1 23 VAL 23 72 72 VAL VAL A . n A 1 24 ILE 24 73 73 ILE ILE A . n A 1 25 LEU 25 74 74 LEU LEU A . n A 1 26 VAL 26 75 75 VAL VAL A . n A 1 27 ALA 27 76 76 ALA ALA A . n A 1 28 VAL 28 77 77 VAL VAL A . n A 1 29 HIS 29 78 78 HIS HIS A . n A 1 30 VAL 30 79 79 VAL VAL A . n A 1 31 ALA 31 80 80 ALA ALA A . n A 1 32 SER 32 81 81 SER SER A . n A 1 33 GLY 33 82 82 GLY GLY A . n A 1 34 TYR 34 83 83 TYR TYR A . n A 1 35 ILE 35 84 84 ILE ILE A . n A 1 36 GLU 36 85 85 GLU GLU A . n A 1 37 ALA 37 86 86 ALA ALA A . n A 1 38 GLU 38 87 87 GLU GLU A . n A 1 39 VAL 39 88 88 VAL VAL A . n A 1 40 ILE 40 89 89 ILE ILE A . n A 1 41 PRO 41 90 90 PRO PRO A . n A 1 42 ALA 42 91 91 ALA ALA A . n A 1 43 GLU 43 92 92 GLU GLU A . n A 1 44 THR 44 93 93 THR THR A . n A 1 45 GLY 45 94 94 GLY GLY A . n A 1 46 GLN 46 95 95 GLN GLN A . n A 1 47 GLU 47 96 96 GLU GLU A . n A 1 48 THR 48 97 97 THR THR A . n A 1 49 ALA 49 98 98 ALA ALA A . n A 1 50 TYR 50 99 99 TYR TYR A . n A 1 51 PHE 51 100 100 PHE PHE A . n A 1 52 LEU 52 101 101 LEU LEU A . n A 1 53 LEU 53 102 102 LEU LEU A . n A 1 54 LYS 54 103 103 LYS LYS A . n A 1 55 LEU 55 104 104 LEU LEU A . n A 1 56 ALA 56 105 105 ALA ALA A . n A 1 57 GLY 57 106 106 GLY GLY A . n A 1 58 ARG 58 107 107 ARG ARG A . n A 1 59 TRP 59 108 108 TRP TRP A . n A 1 60 PRO 60 109 109 PRO PRO A . n A 1 61 VAL 61 110 110 VAL VAL A . n A 1 62 LYS 62 111 111 LYS LYS A . n A 1 63 THR 63 112 112 THR THR A . n A 1 64 VAL 64 113 113 VAL VAL A . n A 1 65 HIS 65 114 114 HIS HIS A . n A 1 66 THR 66 115 115 THR THR A . n A 1 67 ASP 67 116 116 ASP ASP A . n A 1 68 ASN 68 117 117 ASN ASN A . n A 1 69 GLY 69 118 118 GLY GLY A . n A 1 70 SER 70 119 119 SER SER A . n A 1 71 ASN 71 120 120 ASN ASN A . n A 1 72 PHE 72 121 121 PHE PHE A . n A 1 73 THR 73 122 122 THR THR A . n A 1 74 SER 74 123 123 SER SER A . n A 1 75 THR 75 124 124 THR THR A . n A 1 76 THR 76 125 125 THR THR A . n A 1 77 VAL 77 126 126 VAL VAL A . n A 1 78 LYS 78 127 127 LYS LYS A . n A 1 79 ALA 79 128 128 ALA ALA A . n A 1 80 ALA 80 129 129 ALA ALA A . n A 1 81 CYS 81 130 130 CYS CYS A . n A 1 82 ASP 82 131 131 ASP ASP A . n A 1 83 TRP 83 132 132 TRP TRP A . n A 1 84 ALA 84 133 133 ALA ALA A . n A 1 85 GLY 85 134 134 GLY GLY A . n A 1 86 ILE 86 135 135 ILE ILE A . n A 1 87 LYS 87 136 136 LYS LYS A . n A 1 88 GLN 88 137 137 GLN GLN A . n A 1 89 GLU 89 138 138 GLU GLU A . n A 1 90 ASP 90 139 139 ASP ASP A . n A 1 91 GLY 91 140 140 GLY GLY A . n A 1 92 ILE 92 141 141 ILE ILE A . n A 1 93 PRO 93 142 142 PRO PRO A . n A 1 94 TYR 94 143 ? ? ? A . n A 1 95 ASN 95 144 ? ? ? A . n A 1 96 PRO 96 145 ? ? ? A . n A 1 97 GLN 97 146 ? ? ? A . n A 1 98 SER 98 147 ? ? ? A . n A 1 99 GLN 99 148 ? ? ? A . n A 1 100 GLY 100 149 ? ? ? A . n A 1 101 VAL 101 150 ? ? ? A . n A 1 102 ILE 102 151 ? ? ? A . n A 1 103 GLU 103 152 152 GLU GLU A . n A 1 104 SER 104 153 153 SER SER A . n A 1 105 MET 105 154 154 MET MET A . n A 1 106 ASN 106 155 155 ASN ASN A . n A 1 107 LYS 107 156 156 LYS LYS A . n A 1 108 GLU 108 157 157 GLU GLU A . n A 1 109 LEU 109 158 158 LEU LEU A . n A 1 110 LYS 110 159 159 LYS LYS A . n A 1 111 LYS 111 160 160 LYS LYS A . n A 1 112 ILE 112 161 161 ILE ILE A . n A 1 113 ILE 113 162 162 ILE ILE A . n A 1 114 GLY 114 163 163 GLY GLY A . n A 1 115 GLN 115 164 164 GLN GLN A . n A 1 116 VAL 116 165 165 VAL VAL A . n A 1 117 ARG 117 166 166 ARG ARG A . n A 1 118 ASP 118 167 167 ASP ASP A . n A 1 119 GLN 119 168 168 GLN GLN A . n A 1 120 ALA 120 169 169 ALA ALA A . n A 1 121 GLU 121 170 170 GLU GLU A . n A 1 122 HIS 122 171 171 HIS HIS A . n A 1 123 LEU 123 172 172 LEU LEU A . n A 1 124 LYS 124 173 173 LYS LYS A . n A 1 125 THR 125 174 174 THR THR A . n A 1 126 ALA 126 175 175 ALA ALA A . n A 1 127 VAL 127 176 176 VAL VAL A . n A 1 128 GLN 128 177 177 GLN GLN A . n A 1 129 MET 129 178 178 MET MET A . n A 1 130 ALA 130 179 179 ALA ALA A . n A 1 131 VAL 131 180 180 VAL VAL A . n A 1 132 PHE 132 181 181 PHE PHE A . n A 1 133 ILE 133 182 182 ILE ILE A . n A 1 134 HIS 134 183 183 HIS HIS A . n A 1 135 ASN 135 184 184 ASN ASN A . n A 1 136 HIS 136 185 185 HIS HIS A . n A 1 137 LYS 137 186 186 LYS LYS A . n A 1 138 ARG 138 187 187 ARG ARG A . n A 1 139 LYS 139 188 188 LYS LYS A . n A 1 140 GLY 140 189 189 GLY GLY A . n A 1 141 GLY 141 190 190 GLY GLY A . n A 1 142 ILE 142 191 191 ILE ILE A . n A 1 143 GLY 143 192 192 GLY GLY A . n A 1 144 GLY 144 193 193 GLY GLY A . n A 1 145 TYR 145 194 194 TYR TYR A . n A 1 146 SER 146 195 195 SER SER A . n A 1 147 ALA 147 196 196 ALA ALA A . n A 1 148 GLY 148 197 197 GLY GLY A . n A 1 149 GLU 149 198 198 GLU GLU A . n A 1 150 ARG 150 199 199 ARG ARG A . n A 1 151 ILE 151 200 200 ILE ILE A . n A 1 152 VAL 152 201 201 VAL VAL A . n A 1 153 ASP 153 202 202 ASP ASP A . n A 1 154 ILE 154 203 203 ILE ILE A . n A 1 155 ILE 155 204 204 ILE ILE A . n A 1 156 ALA 156 205 205 ALA ALA A . n A 1 157 THR 157 206 206 THR THR A . n A 1 158 ASP 158 207 207 ASP ASP A . n A 1 159 ILE 159 208 ? ? ? A . n A 1 160 GLN 160 209 ? ? ? A . n A 1 161 THR 161 210 ? ? ? A . n A 1 162 LYS 162 211 ? ? ? A . n A 1 163 GLU 163 212 ? ? ? A . n B 1 1 MET 1 50 ? ? ? B . n B 1 2 HIS 2 51 ? ? ? B . n B 1 3 GLY 3 52 ? ? ? B . n B 1 4 GLN 4 53 ? ? ? B . n B 1 5 VAL 5 54 ? ? ? B . n B 1 6 ASP 6 55 ? ? ? B . n B 1 7 SER 7 56 ? ? ? B . n B 1 8 SER 8 57 57 SER SER B . n B 1 9 PRO 9 58 58 PRO PRO B . n B 1 10 GLY 10 59 59 GLY GLY B . n B 1 11 ILE 11 60 60 ILE ILE B . n B 1 12 TRP 12 61 61 TRP TRP B . n B 1 13 GLN 13 62 62 GLN GLN B . n B 1 14 LEU 14 63 63 LEU LEU B . n B 1 15 ASP 15 64 64 ASP ASP B . n B 1 16 CYS 16 65 65 CYS CYS B . n B 1 17 THR 17 66 66 THR THR B . n B 1 18 HIS 18 67 67 HIS HIS B . n B 1 19 LEU 19 68 68 LEU LEU B . n B 1 20 GLU 20 69 69 GLU GLU B . n B 1 21 GLY 21 70 70 GLY GLY B . n B 1 22 LYS 22 71 71 LYS LYS B . n B 1 23 VAL 23 72 72 VAL VAL B . n B 1 24 ILE 24 73 73 ILE ILE B . n B 1 25 LEU 25 74 74 LEU LEU B . n B 1 26 VAL 26 75 75 VAL VAL B . n B 1 27 ALA 27 76 76 ALA ALA B . n B 1 28 VAL 28 77 77 VAL VAL B . n B 1 29 HIS 29 78 78 HIS HIS B . n B 1 30 VAL 30 79 79 VAL VAL B . n B 1 31 ALA 31 80 80 ALA ALA B . n B 1 32 SER 32 81 81 SER SER B . n B 1 33 GLY 33 82 82 GLY GLY B . n B 1 34 TYR 34 83 83 TYR TYR B . n B 1 35 ILE 35 84 84 ILE ILE B . n B 1 36 GLU 36 85 85 GLU GLU B . n B 1 37 ALA 37 86 86 ALA ALA B . n B 1 38 GLU 38 87 87 GLU GLU B . n B 1 39 VAL 39 88 88 VAL VAL B . n B 1 40 ILE 40 89 89 ILE ILE B . n B 1 41 PRO 41 90 90 PRO PRO B . n B 1 42 ALA 42 91 91 ALA ALA B . n B 1 43 GLU 43 92 92 GLU GLU B . n B 1 44 THR 44 93 93 THR THR B . n B 1 45 GLY 45 94 94 GLY GLY B . n B 1 46 GLN 46 95 95 GLN GLN B . n B 1 47 GLU 47 96 96 GLU GLU B . n B 1 48 THR 48 97 97 THR THR B . n B 1 49 ALA 49 98 98 ALA ALA B . n B 1 50 TYR 50 99 99 TYR TYR B . n B 1 51 PHE 51 100 100 PHE PHE B . n B 1 52 LEU 52 101 101 LEU LEU B . n B 1 53 LEU 53 102 102 LEU LEU B . n B 1 54 LYS 54 103 103 LYS LYS B . n B 1 55 LEU 55 104 104 LEU LEU B . n B 1 56 ALA 56 105 105 ALA ALA B . n B 1 57 GLY 57 106 106 GLY GLY B . n B 1 58 ARG 58 107 107 ARG ARG B . n B 1 59 TRP 59 108 108 TRP TRP B . n B 1 60 PRO 60 109 109 PRO PRO B . n B 1 61 VAL 61 110 110 VAL VAL B . n B 1 62 LYS 62 111 111 LYS LYS B . n B 1 63 THR 63 112 112 THR THR B . n B 1 64 VAL 64 113 113 VAL VAL B . n B 1 65 HIS 65 114 114 HIS HIS B . n B 1 66 THR 66 115 115 THR THR B . n B 1 67 ASP 67 116 116 ASP ASP B . n B 1 68 ASN 68 117 117 ASN ASN B . n B 1 69 GLY 69 118 118 GLY GLY B . n B 1 70 SER 70 119 119 SER SER B . n B 1 71 ASN 71 120 120 ASN ASN B . n B 1 72 PHE 72 121 121 PHE PHE B . n B 1 73 THR 73 122 122 THR THR B . n B 1 74 SER 74 123 123 SER SER B . n B 1 75 THR 75 124 124 THR THR B . n B 1 76 THR 76 125 125 THR THR B . n B 1 77 VAL 77 126 126 VAL VAL B . n B 1 78 LYS 78 127 127 LYS LYS B . n B 1 79 ALA 79 128 128 ALA ALA B . n B 1 80 ALA 80 129 129 ALA ALA B . n B 1 81 CYS 81 130 130 CYS CYS B . n B 1 82 ASP 82 131 131 ASP ASP B . n B 1 83 TRP 83 132 132 TRP TRP B . n B 1 84 ALA 84 133 133 ALA ALA B . n B 1 85 GLY 85 134 134 GLY GLY B . n B 1 86 ILE 86 135 135 ILE ILE B . n B 1 87 LYS 87 136 136 LYS LYS B . n B 1 88 GLN 88 137 137 GLN GLN B . n B 1 89 GLU 89 138 138 GLU GLU B . n B 1 90 ASP 90 139 139 ASP ASP B . n B 1 91 GLY 91 140 ? ? ? B . n B 1 92 ILE 92 141 ? ? ? B . n B 1 93 PRO 93 142 ? ? ? B . n B 1 94 TYR 94 143 ? ? ? B . n B 1 95 ASN 95 144 ? ? ? B . n B 1 96 PRO 96 145 ? ? ? B . n B 1 97 GLN 97 146 ? ? ? B . n B 1 98 SER 98 147 ? ? ? B . n B 1 99 GLN 99 148 ? ? ? B . n B 1 100 GLY 100 149 ? ? ? B . n B 1 101 VAL 101 150 ? ? ? B . n B 1 102 ILE 102 151 ? ? ? B . n B 1 103 GLU 103 152 152 GLU GLU B . n B 1 104 SER 104 153 153 SER SER B . n B 1 105 MET 105 154 154 MET MET B . n B 1 106 ASN 106 155 155 ASN ASN B . n B 1 107 LYS 107 156 156 LYS LYS B . n B 1 108 GLU 108 157 157 GLU GLU B . n B 1 109 LEU 109 158 158 LEU LEU B . n B 1 110 LYS 110 159 159 LYS LYS B . n B 1 111 LYS 111 160 160 LYS LYS B . n B 1 112 ILE 112 161 161 ILE ILE B . n B 1 113 ILE 113 162 162 ILE ILE B . n B 1 114 GLY 114 163 163 GLY GLY B . n B 1 115 GLN 115 164 164 GLN GLN B . n B 1 116 VAL 116 165 165 VAL VAL B . n B 1 117 ARG 117 166 166 ARG ARG B . n B 1 118 ASP 118 167 167 ASP ASP B . n B 1 119 GLN 119 168 168 GLN GLN B . n B 1 120 ALA 120 169 169 ALA ALA B . n B 1 121 GLU 121 170 170 GLU GLU B . n B 1 122 HIS 122 171 171 HIS HIS B . n B 1 123 LEU 123 172 172 LEU LEU B . n B 1 124 LYS 124 173 173 LYS LYS B . n B 1 125 THR 125 174 174 THR THR B . n B 1 126 ALA 126 175 175 ALA ALA B . n B 1 127 VAL 127 176 176 VAL VAL B . n B 1 128 GLN 128 177 177 GLN GLN B . n B 1 129 MET 129 178 178 MET MET B . n B 1 130 ALA 130 179 179 ALA ALA B . n B 1 131 VAL 131 180 180 VAL VAL B . n B 1 132 PHE 132 181 181 PHE PHE B . n B 1 133 ILE 133 182 182 ILE ILE B . n B 1 134 HIS 134 183 183 HIS HIS B . n B 1 135 ASN 135 184 184 ASN ASN B . n B 1 136 HIS 136 185 185 HIS HIS B . n B 1 137 LYS 137 186 186 LYS LYS B . n B 1 138 ARG 138 187 187 ARG ARG B . n B 1 139 LYS 139 188 188 LYS LYS B . n B 1 140 GLY 140 189 189 GLY GLY B . n B 1 141 GLY 141 190 190 GLY GLY B . n B 1 142 ILE 142 191 191 ILE ILE B . n B 1 143 GLY 143 192 192 GLY GLY B . n B 1 144 GLY 144 193 193 GLY GLY B . n B 1 145 TYR 145 194 194 TYR TYR B . n B 1 146 SER 146 195 195 SER SER B . n B 1 147 ALA 147 196 196 ALA ALA B . n B 1 148 GLY 148 197 197 GLY GLY B . n B 1 149 GLU 149 198 198 GLU GLU B . n B 1 150 ARG 150 199 199 ARG ARG B . n B 1 151 ILE 151 200 200 ILE ILE B . n B 1 152 VAL 152 201 201 VAL VAL B . n B 1 153 ASP 153 202 202 ASP ASP B . n B 1 154 ILE 154 203 203 ILE ILE B . n B 1 155 ILE 155 204 204 ILE ILE B . n B 1 156 ALA 156 205 205 ALA ALA B . n B 1 157 THR 157 206 206 THR THR B . n B 1 158 ASP 158 207 207 ASP ASP B . n B 1 159 ILE 159 208 208 ILE ILE B . n B 1 160 GLN 160 209 209 GLN GLN B . n B 1 161 THR 161 210 ? ? ? B . n B 1 162 LYS 162 211 ? ? ? B . n B 1 163 GLU 163 212 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SO4 1 1 1 SO4 SO4 A . E 4 MPV 1 213 1 MPV MPA A . F 5 CD 1 1003 1003 CD CD A . G 5 CD 1 1004 1004 CD CD A . H 3 SO4 1 2 2 SO4 SO4 B . I 4 MPV 1 213 1 MPV MPA B . J 5 CD 1 1001 1001 CD CD B . K 5 CD 1 1002 1002 CD CD B . L 6 HOH 1 5 5 HOH HOH A . L 6 HOH 2 7 7 HOH HOH A . L 6 HOH 3 8 8 HOH HOH A . L 6 HOH 4 10 10 HOH HOH A . L 6 HOH 5 13 13 HOH HOH A . L 6 HOH 6 14 14 HOH HOH A . L 6 HOH 7 15 15 HOH HOH A . L 6 HOH 8 16 16 HOH HOH A . L 6 HOH 9 18 18 HOH HOH A . L 6 HOH 10 20 20 HOH HOH A . L 6 HOH 11 24 24 HOH HOH A . L 6 HOH 12 25 25 HOH HOH A . L 6 HOH 13 27 27 HOH HOH A . L 6 HOH 14 28 28 HOH HOH A . L 6 HOH 15 31 31 HOH HOH A . L 6 HOH 16 32 32 HOH HOH A . L 6 HOH 17 33 33 HOH HOH A . L 6 HOH 18 38 38 HOH HOH A . L 6 HOH 19 44 44 HOH HOH A . L 6 HOH 20 49 49 HOH HOH A . L 6 HOH 21 214 1 HOH HOH A . L 6 HOH 22 215 51 HOH HOH A . L 6 HOH 23 216 52 HOH HOH A . L 6 HOH 24 217 53 HOH HOH A . L 6 HOH 25 218 56 HOH HOH A . L 6 HOH 26 219 57 HOH HOH A . M 6 HOH 1 3 3 HOH HOH B . M 6 HOH 2 4 4 HOH HOH B . M 6 HOH 3 6 6 HOH HOH B . M 6 HOH 4 9 9 HOH HOH B . M 6 HOH 5 11 11 HOH HOH B . M 6 HOH 6 12 12 HOH HOH B . M 6 HOH 7 17 17 HOH HOH B . M 6 HOH 8 19 19 HOH HOH B . M 6 HOH 9 21 21 HOH HOH B . M 6 HOH 10 22 22 HOH HOH B . M 6 HOH 11 23 23 HOH HOH B . M 6 HOH 12 26 26 HOH HOH B . M 6 HOH 13 29 29 HOH HOH B . M 6 HOH 14 30 30 HOH HOH B . M 6 HOH 15 34 34 HOH HOH B . M 6 HOH 16 35 35 HOH HOH B . M 6 HOH 17 36 36 HOH HOH B . M 6 HOH 18 37 37 HOH HOH B . M 6 HOH 19 39 39 HOH HOH B . M 6 HOH 20 40 40 HOH HOH B . M 6 HOH 21 41 41 HOH HOH B . M 6 HOH 22 42 42 HOH HOH B . M 6 HOH 23 43 43 HOH HOH B . M 6 HOH 24 45 45 HOH HOH B . M 6 HOH 25 46 46 HOH HOH B . M 6 HOH 26 47 47 HOH HOH B . M 6 HOH 27 48 48 HOH HOH B . M 6 HOH 28 214 2 HOH HOH B . M 6 HOH 29 215 50 HOH HOH B . M 6 HOH 30 216 54 HOH HOH B . M 6 HOH 31 217 55 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900003 _pdbx_molecule_features.name sucrose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900003 _pdbx_molecule.asym_id C # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2830 ? 1 MORE -14 ? 1 'SSA (A^2)' 13070 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 16 ? A CYS 65 ? 1_555 CD ? F CD . ? A CD 1003 ? 1_555 NE2 ? A HIS 18 ? A HIS 67 ? 1_555 116.3 ? 2 SG ? A CYS 16 ? A CYS 65 ? 1_555 CD ? F CD . ? A CD 1003 ? 1_555 OE1 ? A GLU 43 ? A GLU 92 ? 1_555 103.3 ? 3 NE2 ? A HIS 18 ? A HIS 67 ? 1_555 CD ? F CD . ? A CD 1003 ? 1_555 OE1 ? A GLU 43 ? A GLU 92 ? 1_555 88.1 ? 4 SG ? A CYS 16 ? A CYS 65 ? 1_555 CD ? F CD . ? A CD 1003 ? 1_555 O ? L HOH . ? A HOH 217 ? 1_555 86.7 ? 5 NE2 ? A HIS 18 ? A HIS 67 ? 1_555 CD ? F CD . ? A CD 1003 ? 1_555 O ? L HOH . ? A HOH 217 ? 1_555 88.0 ? 6 OE1 ? A GLU 43 ? A GLU 92 ? 1_555 CD ? F CD . ? A CD 1003 ? 1_555 O ? L HOH . ? A HOH 217 ? 1_555 170.0 ? 7 SG ? A CYS 16 ? A CYS 65 ? 1_555 CD ? G CD . ? A CD 1004 ? 1_555 OE2 ? A GLU 43 ? A GLU 92 ? 1_555 94.7 ? 8 SG ? A CYS 16 ? A CYS 65 ? 1_555 CD ? G CD . ? A CD 1004 ? 1_555 OD2 ? A ASP 67 ? A ASP 116 ? 1_555 104.0 ? 9 OE2 ? A GLU 43 ? A GLU 92 ? 1_555 CD ? G CD . ? A CD 1004 ? 1_555 OD2 ? A ASP 67 ? A ASP 116 ? 1_555 161.0 ? 10 SG ? A CYS 16 ? A CYS 65 ? 1_555 CD ? G CD . ? A CD 1004 ? 1_555 O ? L HOH . ? A HOH 214 ? 1_555 96.8 ? 11 OE2 ? A GLU 43 ? A GLU 92 ? 1_555 CD ? G CD . ? A CD 1004 ? 1_555 O ? L HOH . ? A HOH 214 ? 1_555 90.3 ? 12 OD2 ? A ASP 67 ? A ASP 116 ? 1_555 CD ? G CD . ? A CD 1004 ? 1_555 O ? L HOH . ? A HOH 214 ? 1_555 90.0 ? 13 O ? M HOH . ? B HOH 40 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 SG ? B CYS 16 ? B CYS 65 ? 1_555 159.3 ? 14 O ? M HOH . ? B HOH 40 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 OE2 ? B GLU 43 ? B GLU 92 ? 1_555 83.6 ? 15 SG ? B CYS 16 ? B CYS 65 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 OE2 ? B GLU 43 ? B GLU 92 ? 1_555 86.4 ? 16 O ? M HOH . ? B HOH 40 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 OD2 ? B ASP 67 ? B ASP 116 ? 1_555 83.5 ? 17 SG ? B CYS 16 ? B CYS 65 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 OD2 ? B ASP 67 ? B ASP 116 ? 1_555 97.6 ? 18 OE2 ? B GLU 43 ? B GLU 92 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 OD2 ? B ASP 67 ? B ASP 116 ? 1_555 153.1 ? 19 O ? M HOH . ? B HOH 40 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 214 ? 1_555 94.1 ? 20 SG ? B CYS 16 ? B CYS 65 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 214 ? 1_555 106.2 ? 21 OE2 ? B GLU 43 ? B GLU 92 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 214 ? 1_555 107.2 ? 22 OD2 ? B ASP 67 ? B ASP 116 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 214 ? 1_555 97.2 ? 23 O ? M HOH . ? B HOH 40 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 93.7 ? 24 SG ? B CYS 16 ? B CYS 65 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 65.6 ? 25 OE2 ? B GLU 43 ? B GLU 92 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 62.9 ? 26 OD2 ? B ASP 67 ? B ASP 116 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 94.5 ? 27 O ? M HOH . ? B HOH 214 ? 1_555 CD ? J CD . ? B CD 1001 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 166.6 ? 28 O ? M HOH . ? B HOH 43 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 SG ? B CYS 16 ? B CYS 65 ? 1_555 88.0 ? 29 O ? M HOH . ? B HOH 43 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 NE2 ? B HIS 18 ? B HIS 67 ? 1_555 100.4 ? 30 SG ? B CYS 16 ? B CYS 65 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 NE2 ? B HIS 18 ? B HIS 67 ? 1_555 114.7 ? 31 O ? M HOH . ? B HOH 43 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 OE1 ? B GLU 43 ? B GLU 92 ? 1_555 166.0 ? 32 SG ? B CYS 16 ? B CYS 65 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 OE1 ? B GLU 43 ? B GLU 92 ? 1_555 104.7 ? 33 NE2 ? B HIS 18 ? B HIS 67 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 OE1 ? B GLU 43 ? B GLU 92 ? 1_555 80.0 ? 34 O ? M HOH . ? B HOH 43 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 73.6 ? 35 SG ? B CYS 16 ? B CYS 65 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 73.5 ? 36 NE2 ? B HIS 18 ? B HIS 67 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 170.1 ? 37 OE1 ? B GLU 43 ? B GLU 92 ? 1_555 CD ? K CD . ? B CD 1002 ? 1_555 O ? M HOH . ? B HOH 217 ? 1_555 103.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-01 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Non-polymer description' 8 3 'Structure model' 'Structure summary' 9 4 'Structure model' 'Data collection' 10 4 'Structure model' 'Database references' 11 4 'Structure model' 'Refinement description' 12 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' entity_name_com 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_molecule_features 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_conn_angle 15 3 'Structure model' pdbx_validate_close_contact 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_conn_type 19 3 'Structure model' struct_ref_seq_dif 20 3 'Structure model' struct_site 21 3 'Structure model' struct_site_gen 22 4 'Structure model' chem_comp 23 4 'Structure model' chem_comp_atom 24 4 'Structure model' chem_comp_bond 25 4 'Structure model' database_2 26 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.occupancy' 14 3 'Structure model' '_atom_site.type_symbol' 15 3 'Structure model' '_chem_comp.formula' 16 3 'Structure model' '_chem_comp.formula_weight' 17 3 'Structure model' '_chem_comp.id' 18 3 'Structure model' '_chem_comp.mon_nstd_flag' 19 3 'Structure model' '_chem_comp.name' 20 3 'Structure model' '_chem_comp.type' 21 3 'Structure model' '_entity.formula_weight' 22 3 'Structure model' '_entity.pdbx_description' 23 3 'Structure model' '_entity.pdbx_number_of_molecules' 24 3 'Structure model' '_entity.src_method' 25 3 'Structure model' '_entity.type' 26 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 27 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 28 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 29 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 30 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 31 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 32 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 33 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 34 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 35 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 36 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 37 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 38 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 39 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 40 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 41 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 42 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 43 3 'Structure model' '_pdbx_struct_conn_angle.value' 44 3 'Structure model' '_struct_asym.entity_id' 45 3 'Structure model' '_struct_ref_seq_dif.details' 46 4 'Structure model' '_chem_comp.pdbx_synonyms' 47 4 'Structure model' '_database_2.pdbx_DOI' 48 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 B ARG 107 ? ? O B HOH 30 ? ? 2.01 2 1 O5 C GLC 1 ? ? O5 C FRU 2 ? ? 2.16 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 127 ? CG ? A LYS 78 CG 2 1 Y 1 A LYS 127 ? CD ? A LYS 78 CD 3 1 Y 1 A LYS 127 ? CE ? A LYS 78 CE 4 1 Y 1 A LYS 127 ? NZ ? A LYS 78 NZ 5 1 Y 1 A LYS 136 ? CG ? A LYS 87 CG 6 1 Y 1 A LYS 136 ? CD ? A LYS 87 CD 7 1 Y 1 A LYS 136 ? CE ? A LYS 87 CE 8 1 Y 1 A LYS 136 ? NZ ? A LYS 87 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 50 ? A MET 1 2 1 Y 1 A HIS 51 ? A HIS 2 3 1 Y 1 A GLY 52 ? A GLY 3 4 1 Y 1 A GLN 53 ? A GLN 4 5 1 Y 1 A VAL 54 ? A VAL 5 6 1 Y 1 A ASP 55 ? A ASP 6 7 1 Y 1 A TYR 143 ? A TYR 94 8 1 Y 1 A ASN 144 ? A ASN 95 9 1 Y 1 A PRO 145 ? A PRO 96 10 1 Y 1 A GLN 146 ? A GLN 97 11 1 Y 1 A SER 147 ? A SER 98 12 1 Y 1 A GLN 148 ? A GLN 99 13 1 Y 1 A GLY 149 ? A GLY 100 14 1 Y 1 A VAL 150 ? A VAL 101 15 1 Y 1 A ILE 151 ? A ILE 102 16 1 Y 1 A ILE 208 ? A ILE 159 17 1 Y 1 A GLN 209 ? A GLN 160 18 1 Y 1 A THR 210 ? A THR 161 19 1 Y 1 A LYS 211 ? A LYS 162 20 1 Y 1 A GLU 212 ? A GLU 163 21 1 Y 1 B MET 50 ? B MET 1 22 1 Y 1 B HIS 51 ? B HIS 2 23 1 Y 1 B GLY 52 ? B GLY 3 24 1 Y 1 B GLN 53 ? B GLN 4 25 1 Y 1 B VAL 54 ? B VAL 5 26 1 Y 1 B ASP 55 ? B ASP 6 27 1 Y 1 B SER 56 ? B SER 7 28 1 Y 1 B GLY 140 ? B GLY 91 29 1 Y 1 B ILE 141 ? B ILE 92 30 1 Y 1 B PRO 142 ? B PRO 93 31 1 Y 1 B TYR 143 ? B TYR 94 32 1 Y 1 B ASN 144 ? B ASN 95 33 1 Y 1 B PRO 145 ? B PRO 96 34 1 Y 1 B GLN 146 ? B GLN 97 35 1 Y 1 B SER 147 ? B SER 98 36 1 Y 1 B GLN 148 ? B GLN 99 37 1 Y 1 B GLY 149 ? B GLY 100 38 1 Y 1 B VAL 150 ? B VAL 101 39 1 Y 1 B ILE 151 ? B ILE 102 40 1 Y 1 B THR 210 ? B THR 161 41 1 Y 1 B LYS 211 ? B LYS 162 42 1 Y 1 B GLU 212 ? B GLU 163 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CD CD CD N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 FRU C1 C N N 89 FRU C2 C N R 90 FRU C3 C N S 91 FRU C4 C N S 92 FRU C5 C N R 93 FRU C6 C N N 94 FRU O1 O N N 95 FRU O2 O N N 96 FRU O3 O N N 97 FRU O4 O N N 98 FRU O5 O N N 99 FRU O6 O N N 100 FRU H11 H N N 101 FRU H12 H N N 102 FRU H3 H N N 103 FRU H4 H N N 104 FRU H5 H N N 105 FRU H61 H N N 106 FRU H62 H N N 107 FRU HO1 H N N 108 FRU HO2 H N N 109 FRU HO3 H N N 110 FRU HO4 H N N 111 FRU HO6 H N N 112 GLC C1 C N S 113 GLC C2 C N R 114 GLC C3 C N S 115 GLC C4 C N S 116 GLC C5 C N R 117 GLC C6 C N N 118 GLC O1 O N N 119 GLC O2 O N N 120 GLC O3 O N N 121 GLC O4 O N N 122 GLC O5 O N N 123 GLC O6 O N N 124 GLC H1 H N N 125 GLC H2 H N N 126 GLC H3 H N N 127 GLC H4 H N N 128 GLC H5 H N N 129 GLC H61 H N N 130 GLC H62 H N N 131 GLC HO1 H N N 132 GLC HO2 H N N 133 GLC HO3 H N N 134 GLC HO4 H N N 135 GLC HO6 H N N 136 GLN N N N N 137 GLN CA C N S 138 GLN C C N N 139 GLN O O N N 140 GLN CB C N N 141 GLN CG C N N 142 GLN CD C N N 143 GLN OE1 O N N 144 GLN NE2 N N N 145 GLN OXT O N N 146 GLN H H N N 147 GLN H2 H N N 148 GLN HA H N N 149 GLN HB2 H N N 150 GLN HB3 H N N 151 GLN HG2 H N N 152 GLN HG3 H N N 153 GLN HE21 H N N 154 GLN HE22 H N N 155 GLN HXT H N N 156 GLU N N N N 157 GLU CA C N S 158 GLU C C N N 159 GLU O O N N 160 GLU CB C N N 161 GLU CG C N N 162 GLU CD C N N 163 GLU OE1 O N N 164 GLU OE2 O N N 165 GLU OXT O N N 166 GLU H H N N 167 GLU H2 H N N 168 GLU HA H N N 169 GLU HB2 H N N 170 GLU HB3 H N N 171 GLU HG2 H N N 172 GLU HG3 H N N 173 GLU HE2 H N N 174 GLU HXT H N N 175 GLY N N N N 176 GLY CA C N N 177 GLY C C N N 178 GLY O O N N 179 GLY OXT O N N 180 GLY H H N N 181 GLY H2 H N N 182 GLY HA2 H N N 183 GLY HA3 H N N 184 GLY HXT H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 MPV C1 C Y N 299 MPV C2 C Y N 300 MPV N3 N Y N 301 MPV N4 N Y N 302 MPV C5 C Y N 303 MPV C6 C Y N 304 MPV S7 S Y N 305 MPV C8 C Y N 306 MPV C9 C Y N 307 MPV C10 C Y N 308 MPV C11 C N N 309 MPV N12 N N N 310 MPV H1 H N N 311 MPV H8 H N N 312 MPV H9 H N N 313 MPV H10 H N N 314 MPV H11 H N N 315 MPV H11A H N N 316 MPV H11B H N N 317 MPV HN12 H N N 318 MPV HN1A H N N 319 PHE N N N N 320 PHE CA C N S 321 PHE C C N N 322 PHE O O N N 323 PHE CB C N N 324 PHE CG C Y N 325 PHE CD1 C Y N 326 PHE CD2 C Y N 327 PHE CE1 C Y N 328 PHE CE2 C Y N 329 PHE CZ C Y N 330 PHE OXT O N N 331 PHE H H N N 332 PHE H2 H N N 333 PHE HA H N N 334 PHE HB2 H N N 335 PHE HB3 H N N 336 PHE HD1 H N N 337 PHE HD2 H N N 338 PHE HE1 H N N 339 PHE HE2 H N N 340 PHE HZ H N N 341 PHE HXT H N N 342 PRO N N N N 343 PRO CA C N S 344 PRO C C N N 345 PRO O O N N 346 PRO CB C N N 347 PRO CG C N N 348 PRO CD C N N 349 PRO OXT O N N 350 PRO H H N N 351 PRO HA H N N 352 PRO HB2 H N N 353 PRO HB3 H N N 354 PRO HG2 H N N 355 PRO HG3 H N N 356 PRO HD2 H N N 357 PRO HD3 H N N 358 PRO HXT H N N 359 SER N N N N 360 SER CA C N S 361 SER C C N N 362 SER O O N N 363 SER CB C N N 364 SER OG O N N 365 SER OXT O N N 366 SER H H N N 367 SER H2 H N N 368 SER HA H N N 369 SER HB2 H N N 370 SER HB3 H N N 371 SER HG H N N 372 SER HXT H N N 373 SO4 S S N N 374 SO4 O1 O N N 375 SO4 O2 O N N 376 SO4 O3 O N N 377 SO4 O4 O N N 378 THR N N N N 379 THR CA C N S 380 THR C C N N 381 THR O O N N 382 THR CB C N R 383 THR OG1 O N N 384 THR CG2 C N N 385 THR OXT O N N 386 THR H H N N 387 THR H2 H N N 388 THR HA H N N 389 THR HB H N N 390 THR HG1 H N N 391 THR HG21 H N N 392 THR HG22 H N N 393 THR HG23 H N N 394 THR HXT H N N 395 TRP N N N N 396 TRP CA C N S 397 TRP C C N N 398 TRP O O N N 399 TRP CB C N N 400 TRP CG C Y N 401 TRP CD1 C Y N 402 TRP CD2 C Y N 403 TRP NE1 N Y N 404 TRP CE2 C Y N 405 TRP CE3 C Y N 406 TRP CZ2 C Y N 407 TRP CZ3 C Y N 408 TRP CH2 C Y N 409 TRP OXT O N N 410 TRP H H N N 411 TRP H2 H N N 412 TRP HA H N N 413 TRP HB2 H N N 414 TRP HB3 H N N 415 TRP HD1 H N N 416 TRP HE1 H N N 417 TRP HE3 H N N 418 TRP HZ2 H N N 419 TRP HZ3 H N N 420 TRP HH2 H N N 421 TRP HXT H N N 422 TYR N N N N 423 TYR CA C N S 424 TYR C C N N 425 TYR O O N N 426 TYR CB C N N 427 TYR CG C Y N 428 TYR CD1 C Y N 429 TYR CD2 C Y N 430 TYR CE1 C Y N 431 TYR CE2 C Y N 432 TYR CZ C Y N 433 TYR OH O N N 434 TYR OXT O N N 435 TYR H H N N 436 TYR H2 H N N 437 TYR HA H N N 438 TYR HB2 H N N 439 TYR HB3 H N N 440 TYR HD1 H N N 441 TYR HD2 H N N 442 TYR HE1 H N N 443 TYR HE2 H N N 444 TYR HH H N N 445 TYR HXT H N N 446 VAL N N N N 447 VAL CA C N S 448 VAL C C N N 449 VAL O O N N 450 VAL CB C N N 451 VAL CG1 C N N 452 VAL CG2 C N N 453 VAL OXT O N N 454 VAL H H N N 455 VAL H2 H N N 456 VAL HA H N N 457 VAL HB H N N 458 VAL HG11 H N N 459 VAL HG12 H N N 460 VAL HG13 H N N 461 VAL HG21 H N N 462 VAL HG22 H N N 463 VAL HG23 H N N 464 VAL HXT H N N 465 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FRU C1 C2 sing N N 83 FRU C1 O1 sing N N 84 FRU C1 H11 sing N N 85 FRU C1 H12 sing N N 86 FRU C2 C3 sing N N 87 FRU C2 O2 sing N N 88 FRU C2 O5 sing N N 89 FRU C3 C4 sing N N 90 FRU C3 O3 sing N N 91 FRU C3 H3 sing N N 92 FRU C4 C5 sing N N 93 FRU C4 O4 sing N N 94 FRU C4 H4 sing N N 95 FRU C5 C6 sing N N 96 FRU C5 O5 sing N N 97 FRU C5 H5 sing N N 98 FRU C6 O6 sing N N 99 FRU C6 H61 sing N N 100 FRU C6 H62 sing N N 101 FRU O1 HO1 sing N N 102 FRU O2 HO2 sing N N 103 FRU O3 HO3 sing N N 104 FRU O4 HO4 sing N N 105 FRU O6 HO6 sing N N 106 GLC C1 C2 sing N N 107 GLC C1 O1 sing N N 108 GLC C1 O5 sing N N 109 GLC C1 H1 sing N N 110 GLC C2 C3 sing N N 111 GLC C2 O2 sing N N 112 GLC C2 H2 sing N N 113 GLC C3 C4 sing N N 114 GLC C3 O3 sing N N 115 GLC C3 H3 sing N N 116 GLC C4 C5 sing N N 117 GLC C4 O4 sing N N 118 GLC C4 H4 sing N N 119 GLC C5 C6 sing N N 120 GLC C5 O5 sing N N 121 GLC C5 H5 sing N N 122 GLC C6 O6 sing N N 123 GLC C6 H61 sing N N 124 GLC C6 H62 sing N N 125 GLC O1 HO1 sing N N 126 GLC O2 HO2 sing N N 127 GLC O3 HO3 sing N N 128 GLC O4 HO4 sing N N 129 GLC O6 HO6 sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 MPV C1 C2 doub Y N 285 MPV C1 C5 sing Y N 286 MPV C2 N3 sing Y N 287 MPV C2 N12 sing N N 288 MPV N3 N4 sing Y N 289 MPV N3 C11 sing N N 290 MPV N4 C5 doub Y N 291 MPV C5 C6 sing Y N 292 MPV C6 S7 sing Y N 293 MPV C6 C10 doub Y N 294 MPV S7 C8 sing Y N 295 MPV C8 C9 doub Y N 296 MPV C9 C10 sing Y N 297 MPV C1 H1 sing N N 298 MPV C8 H8 sing N N 299 MPV C9 H9 sing N N 300 MPV C10 H10 sing N N 301 MPV C11 H11 sing N N 302 MPV C11 H11A sing N N 303 MPV C11 H11B sing N N 304 MPV N12 HN12 sing N N 305 MPV N12 HN1A sing N N 306 PHE N CA sing N N 307 PHE N H sing N N 308 PHE N H2 sing N N 309 PHE CA C sing N N 310 PHE CA CB sing N N 311 PHE CA HA sing N N 312 PHE C O doub N N 313 PHE C OXT sing N N 314 PHE CB CG sing N N 315 PHE CB HB2 sing N N 316 PHE CB HB3 sing N N 317 PHE CG CD1 doub Y N 318 PHE CG CD2 sing Y N 319 PHE CD1 CE1 sing Y N 320 PHE CD1 HD1 sing N N 321 PHE CD2 CE2 doub Y N 322 PHE CD2 HD2 sing N N 323 PHE CE1 CZ doub Y N 324 PHE CE1 HE1 sing N N 325 PHE CE2 CZ sing Y N 326 PHE CE2 HE2 sing N N 327 PHE CZ HZ sing N N 328 PHE OXT HXT sing N N 329 PRO N CA sing N N 330 PRO N CD sing N N 331 PRO N H sing N N 332 PRO CA C sing N N 333 PRO CA CB sing N N 334 PRO CA HA sing N N 335 PRO C O doub N N 336 PRO C OXT sing N N 337 PRO CB CG sing N N 338 PRO CB HB2 sing N N 339 PRO CB HB3 sing N N 340 PRO CG CD sing N N 341 PRO CG HG2 sing N N 342 PRO CG HG3 sing N N 343 PRO CD HD2 sing N N 344 PRO CD HD3 sing N N 345 PRO OXT HXT sing N N 346 SER N CA sing N N 347 SER N H sing N N 348 SER N H2 sing N N 349 SER CA C sing N N 350 SER CA CB sing N N 351 SER CA HA sing N N 352 SER C O doub N N 353 SER C OXT sing N N 354 SER CB OG sing N N 355 SER CB HB2 sing N N 356 SER CB HB3 sing N N 357 SER OG HG sing N N 358 SER OXT HXT sing N N 359 SO4 S O1 doub N N 360 SO4 S O2 doub N N 361 SO4 S O3 sing N N 362 SO4 S O4 sing N N 363 THR N CA sing N N 364 THR N H sing N N 365 THR N H2 sing N N 366 THR CA C sing N N 367 THR CA CB sing N N 368 THR CA HA sing N N 369 THR C O doub N N 370 THR C OXT sing N N 371 THR CB OG1 sing N N 372 THR CB CG2 sing N N 373 THR CB HB sing N N 374 THR OG1 HG1 sing N N 375 THR CG2 HG21 sing N N 376 THR CG2 HG22 sing N N 377 THR CG2 HG23 sing N N 378 THR OXT HXT sing N N 379 TRP N CA sing N N 380 TRP N H sing N N 381 TRP N H2 sing N N 382 TRP CA C sing N N 383 TRP CA CB sing N N 384 TRP CA HA sing N N 385 TRP C O doub N N 386 TRP C OXT sing N N 387 TRP CB CG sing N N 388 TRP CB HB2 sing N N 389 TRP CB HB3 sing N N 390 TRP CG CD1 doub Y N 391 TRP CG CD2 sing Y N 392 TRP CD1 NE1 sing Y N 393 TRP CD1 HD1 sing N N 394 TRP CD2 CE2 doub Y N 395 TRP CD2 CE3 sing Y N 396 TRP NE1 CE2 sing Y N 397 TRP NE1 HE1 sing N N 398 TRP CE2 CZ2 sing Y N 399 TRP CE3 CZ3 doub Y N 400 TRP CE3 HE3 sing N N 401 TRP CZ2 CH2 doub Y N 402 TRP CZ2 HZ2 sing N N 403 TRP CZ3 CH2 sing Y N 404 TRP CZ3 HZ3 sing N N 405 TRP CH2 HH2 sing N N 406 TRP OXT HXT sing N N 407 TYR N CA sing N N 408 TYR N H sing N N 409 TYR N H2 sing N N 410 TYR CA C sing N N 411 TYR CA CB sing N N 412 TYR CA HA sing N N 413 TYR C O doub N N 414 TYR C OXT sing N N 415 TYR CB CG sing N N 416 TYR CB HB2 sing N N 417 TYR CB HB3 sing N N 418 TYR CG CD1 doub Y N 419 TYR CG CD2 sing Y N 420 TYR CD1 CE1 sing Y N 421 TYR CD1 HD1 sing N N 422 TYR CD2 CE2 doub Y N 423 TYR CD2 HD2 sing N N 424 TYR CE1 CZ doub Y N 425 TYR CE1 HE1 sing N N 426 TYR CE2 CZ sing Y N 427 TYR CE2 HE2 sing N N 428 TYR CZ OH sing N N 429 TYR OH HH sing N N 430 TYR OXT HXT sing N N 431 VAL N CA sing N N 432 VAL N H sing N N 433 VAL N H2 sing N N 434 VAL CA C sing N N 435 VAL CA CB sing N N 436 VAL CA HA sing N N 437 VAL C O doub N N 438 VAL C OXT sing N N 439 VAL CB CG1 sing N N 440 VAL CB CG2 sing N N 441 VAL CB HB sing N N 442 VAL CG1 HG11 sing N N 443 VAL CG1 HG12 sing N N 444 VAL CG1 HG13 sing N N 445 VAL CG2 HG21 sing N N 446 VAL CG2 HG22 sing N N 447 VAL CG2 HG23 sing N N 448 VAL OXT HXT sing N N 449 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 GLC 1 C GLC 1 D SUC 1 n C 2 FRU 2 C FRU 2 D SUC 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FRU 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufb FRU 'COMMON NAME' GMML 1.0 b-D-fructofuranose FRU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Fruf FRU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DFrufb2-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 FRU 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 '1-methyl-3-(thiophen-2-yl)-1H-pyrazol-5-amine' MPV 5 'CADMIUM ION' CD 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3L3U _pdbx_initial_refinement_model.details 'PDB ENTRY 3L3U' #