data_3P06 # _entry.id 3P06 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3P06 RCSB RCSB061791 WWPDB D_1000061791 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2PNL 'Birnavirus VP4 protease' unspecified PDB 2PNM 'Birnavirus VP4 protease' unspecified PDB 2GEF 'Birnavirus VP4 protease' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3P06 _pdbx_database_status.recvd_initial_deposition_date 2010-09-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chung, I.Y.W.' 1 'Paetzel, M.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Crystal Structure of a Viral Protease Intramolecular Acyl-enzyme Complex: INSIGHTS INTO cis-CLEAVAGE AT THE VP4/VP3 JUNCTION OF TELLINA BIRNAVIRUS. ; J.Biol.Chem. 286 12475 12482 2011 JBCHA3 US 0021-9258 0071 ? 21288899 10.1074/jbc.M110.198812 1 'Expression, purification and crystallization of VP4 protease from Tellina virus 1.' 'Acta Crystallogr.,Sect.F' 67 157 160 2011 ? DK 1744-3091 ? ? 21206051 10.1107/S1744309110048803 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chung, I.Y.' 1 primary 'Paetzel, M.' 2 1 'Chung, I.Y.' 3 1 'Paetzel, M.' 4 # _cell.entry_id 3P06 _cell.length_a 59.140 _cell.length_b 59.140 _cell.length_c 208.142 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3P06 _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'VP4 protein' 20563.883 1 3.4.21.115 ? 'UNP residues 637-830' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 4 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 5 non-polymer syn UREA 60.055 1 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 7 water nat water 18.015 47 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;NGVELSAVGVLLPVL(MSE)DSGRRISGGAF(MSE)AVKGDLSEHIKNPKNTRIAQTVAGGTIYGLSE(MSE)VNIDEAE KLPIKGAITVLPVVQATATSILVPDNQPQLAFNSWEAAACAADTLESQQTPFL(MSE)VTGAVESGNLSPNLLAVQKQLL VAKPAGIGLAANSDRALKVVTLEQLRQVVGDKPWRKP(MSE)VTFSSGKNVAQA ; _entity_poly.pdbx_seq_one_letter_code_can ;NGVELSAVGVLLPVLMDSGRRISGGAFMAVKGDLSEHIKNPKNTRIAQTVAGGTIYGLSEMVNIDEAEKLPIKGAITVLP VVQATATSILVPDNQPQLAFNSWEAAACAADTLESQQTPFLMVTGAVESGNLSPNLLAVQKQLLVAKPAGIGLAANSDRA LKVVTLEQLRQVVGDKPWRKPMVTFSSGKNVAQA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 GLY n 1 3 VAL n 1 4 GLU n 1 5 LEU n 1 6 SER n 1 7 ALA n 1 8 VAL n 1 9 GLY n 1 10 VAL n 1 11 LEU n 1 12 LEU n 1 13 PRO n 1 14 VAL n 1 15 LEU n 1 16 MSE n 1 17 ASP n 1 18 SER n 1 19 GLY n 1 20 ARG n 1 21 ARG n 1 22 ILE n 1 23 SER n 1 24 GLY n 1 25 GLY n 1 26 ALA n 1 27 PHE n 1 28 MSE n 1 29 ALA n 1 30 VAL n 1 31 LYS n 1 32 GLY n 1 33 ASP n 1 34 LEU n 1 35 SER n 1 36 GLU n 1 37 HIS n 1 38 ILE n 1 39 LYS n 1 40 ASN n 1 41 PRO n 1 42 LYS n 1 43 ASN n 1 44 THR n 1 45 ARG n 1 46 ILE n 1 47 ALA n 1 48 GLN n 1 49 THR n 1 50 VAL n 1 51 ALA n 1 52 GLY n 1 53 GLY n 1 54 THR n 1 55 ILE n 1 56 TYR n 1 57 GLY n 1 58 LEU n 1 59 SER n 1 60 GLU n 1 61 MSE n 1 62 VAL n 1 63 ASN n 1 64 ILE n 1 65 ASP n 1 66 GLU n 1 67 ALA n 1 68 GLU n 1 69 LYS n 1 70 LEU n 1 71 PRO n 1 72 ILE n 1 73 LYS n 1 74 GLY n 1 75 ALA n 1 76 ILE n 1 77 THR n 1 78 VAL n 1 79 LEU n 1 80 PRO n 1 81 VAL n 1 82 VAL n 1 83 GLN n 1 84 ALA n 1 85 THR n 1 86 ALA n 1 87 THR n 1 88 SER n 1 89 ILE n 1 90 LEU n 1 91 VAL n 1 92 PRO n 1 93 ASP n 1 94 ASN n 1 95 GLN n 1 96 PRO n 1 97 GLN n 1 98 LEU n 1 99 ALA n 1 100 PHE n 1 101 ASN n 1 102 SER n 1 103 TRP n 1 104 GLU n 1 105 ALA n 1 106 ALA n 1 107 ALA n 1 108 CYS n 1 109 ALA n 1 110 ALA n 1 111 ASP n 1 112 THR n 1 113 LEU n 1 114 GLU n 1 115 SER n 1 116 GLN n 1 117 GLN n 1 118 THR n 1 119 PRO n 1 120 PHE n 1 121 LEU n 1 122 MSE n 1 123 VAL n 1 124 THR n 1 125 GLY n 1 126 ALA n 1 127 VAL n 1 128 GLU n 1 129 SER n 1 130 GLY n 1 131 ASN n 1 132 LEU n 1 133 SER n 1 134 PRO n 1 135 ASN n 1 136 LEU n 1 137 LEU n 1 138 ALA n 1 139 VAL n 1 140 GLN n 1 141 LYS n 1 142 GLN n 1 143 LEU n 1 144 LEU n 1 145 VAL n 1 146 ALA n 1 147 LYS n 1 148 PRO n 1 149 ALA n 1 150 GLY n 1 151 ILE n 1 152 GLY n 1 153 LEU n 1 154 ALA n 1 155 ALA n 1 156 ASN n 1 157 SER n 1 158 ASP n 1 159 ARG n 1 160 ALA n 1 161 LEU n 1 162 LYS n 1 163 VAL n 1 164 VAL n 1 165 THR n 1 166 LEU n 1 167 GLU n 1 168 GLN n 1 169 LEU n 1 170 ARG n 1 171 GLN n 1 172 VAL n 1 173 VAL n 1 174 GLY n 1 175 ASP n 1 176 LYS n 1 177 PRO n 1 178 TRP n 1 179 ARG n 1 180 LYS n 1 181 PRO n 1 182 MSE n 1 183 VAL n 1 184 THR n 1 185 PHE n 1 186 SER n 1 187 SER n 1 188 GLY n 1 189 LYS n 1 190 ASN n 1 191 VAL n 1 192 ALA n 1 193 GLN n 1 194 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'viral protein 4 (VP4)' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Tellina virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 321302 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Tuner (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b+ _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2PBR5_9VIRU _struct_ref.pdbx_db_accession Q2PBR5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NGVELSAVGVLLPVLMDSGRRISGGAFMAVKGDLSEHIKNPKNTRIAQTVAGGTIYGLSEMVNIDEAEKLPIKGAITVLP VVQATATSILVPDNQPQLAFNSWEAAACAADTLESQQTPFLMVTGAVESGNLSPNLLAVQKQLLVAKPAGIGLAANSDRA LKVVTLEQLRQVVGDKPWRKPMVTFSSGKNVAQA ; _struct_ref.pdbx_align_begin 637 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3P06 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 194 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2PBR5 _struct_ref_seq.db_align_beg 637 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 830 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 637 _struct_ref_seq.pdbx_auth_seq_align_end 830 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 URE non-polymer . UREA ? 'C H4 N2 O' 60.055 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3P06 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.55 _exptl_crystal.density_percent_sol 51.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;reservoir: 21% PEG8000, 0.55M ammonium sulfate. drop: On a coverslip, 1 microliter of VP4 was mixed with 1 microliter of reservoir reagent(21% PEG8000, 0.55M ammonium sulfate) and 1 microliter of 0.2M urea as additive. To aid in crystal nucleation, this drop was seeded with 1 microliter of selenomethionine- labelled crystal from an older drop, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 296K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2010-05-28 _diffrn_detector.details 'DCM WITH CRYO-COOLED 1ST CRYSTAL SAGITTALLY BENT 2ND CRYSTAL FOLLOWED BY VERTICALLY FOCUSING MIRROR.' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'A DOUBLE CRYSTAL MONOCHROMATOR (DCM)' _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97893 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_wavelength 0.97893 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3P06 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 52.000 _reflns.d_resolution_high 2.100 _reflns.number_obs 13466 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.10700 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.5000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.400 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.20 _reflns_shell.percent_possible_all 98.5 _reflns_shell.Rmerge_I_obs 0.35000 _reflns_shell.pdbx_Rsym_value 0.30000 _reflns_shell.meanI_over_sigI_obs 4.300 _reflns_shell.pdbx_redundancy 5.40 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3P06 _refine.ls_number_reflns_obs 12743 _refine.ls_number_reflns_all 13466 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 52.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.185 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.233 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 662 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.B_iso_mean 28.44 _refine.aniso_B[1][1] -0.02000 _refine.aniso_B[2][2] -0.02000 _refine.aniso_B[3][3] 0.03000 _refine.aniso_B[1][2] -0.01000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.171 _refine.overall_SU_ML 0.113 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.221 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1424 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 47 _refine_hist.number_atoms_total 1503 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 52.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.024 0.022 ? 1471 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.979 1.996 ? 1993 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.422 5.000 ? 193 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.944 26.078 ? 51 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.683 15.000 ? 248 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.371 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.138 0.200 ? 240 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.021 ? 1064 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.186 1.500 ? 968 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.126 2.000 ? 1555 'X-RAY DIFFRACTION' ? r_scbond_it 3.965 3.000 ? 502 'X-RAY DIFFRACTION' ? r_scangle_it 6.446 4.500 ? 437 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.15 _refine_ls_shell.number_reflns_R_work 867 _refine_ls_shell.R_factor_R_work 0.2090 _refine_ls_shell.percent_reflns_obs 96.41 _refine_ls_shell.R_factor_R_free 0.4050 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 3P06 _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _struct.entry_id 3P06 _struct.title 'Crystal structure of Tellina virus 1 VP4 protease in the form of an intra-molecular(cis)acyl-enzyme complex.' _struct.pdbx_descriptor 'VP4 protein (E.C.3.4.21.115)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3P06 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;cis-cleavage, intramolecular acyl-enzyme, ester-linkage, alpha/beta protein, protease, polyprotein processing, acyl-enzyme, HYDROLASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 34 ? ILE A 38 ? LEU A 670 ILE A 674 5 ? 5 HELX_P HELX_P2 2 ASN A 63 ? GLU A 68 ? ASN A 699 GLU A 704 1 ? 6 HELX_P HELX_P3 3 TRP A 103 ? THR A 112 ? TRP A 739 THR A 748 1 ? 10 HELX_P HELX_P4 4 LEU A 137 ? VAL A 145 ? LEU A 773 VAL A 781 1 ? 9 HELX_P HELX_P5 5 VAL A 145 ? GLY A 150 ? VAL A 781 GLY A 786 1 ? 6 HELX_P HELX_P6 6 THR A 165 ? GLY A 174 ? THR A 801 GLY A 810 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 15 C ? ? ? 1_555 A MSE 16 N ? ? A LEU 651 A MSE 652 1_555 ? ? ? ? ? ? ? 1.339 ? covale2 covale ? ? A MSE 16 C ? ? ? 1_555 A ASP 17 N ? ? A MSE 652 A ASP 653 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A PHE 27 C ? ? ? 1_555 A MSE 28 N ? ? A PHE 663 A MSE 664 1_555 ? ? ? ? ? ? ? 1.312 ? covale4 covale ? ? A MSE 28 C ? ? ? 1_555 A ALA 29 N ? ? A MSE 664 A ALA 665 1_555 ? ? ? ? ? ? ? 1.324 ? covale5 covale ? ? A GLU 60 C ? ? ? 1_555 A MSE 61 N ? ? A GLU 696 A MSE 697 1_555 ? ? ? ? ? ? ? 1.333 ? covale6 covale ? ? A MSE 61 C ? ? ? 1_555 A VAL 62 N ? ? A MSE 697 A VAL 698 1_555 ? ? ? ? ? ? ? 1.316 ? covale7 covale ? ? A LEU 121 C ? ? ? 1_555 A MSE 122 N ? ? A LEU 757 A MSE 758 1_555 ? ? ? ? ? ? ? 1.315 ? covale8 covale ? ? A MSE 122 C ? ? ? 1_555 A VAL 123 N ? ? A MSE 758 A VAL 759 1_555 ? ? ? ? ? ? ? 1.324 ? covale9 covale ? ? A PRO 181 C ? ? ? 1_555 A MSE 182 N ? ? A PRO 817 A MSE 818 1_555 ? ? ? ? ? ? ? 1.320 ? covale10 covale ? ? A MSE 182 C ? ? ? 1_555 A VAL 183 N ? ? A MSE 818 A VAL 819 1_555 ? ? ? ? ? ? ? 1.335 ? covale11 covale ? ? A SER 102 OG ? ? ? 1_555 A ALA 194 C ? ? A SER 738 A ALA 830 1_555 ? ? ? ? ? ? ? 1.338 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 7 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? parallel C 1 2 ? parallel C 2 3 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 2 ? SER A 6 ? GLY A 638 SER A 642 A 2 SER A 88 ? PRO A 92 ? SER A 724 PRO A 728 A 3 GLN A 83 ? ALA A 84 ? GLN A 719 ALA A 720 A 4 VAL A 183 ? THR A 184 ? VAL A 819 THR A 820 B 1 ARG A 45 ? GLN A 48 ? ARG A 681 GLN A 684 B 2 THR A 54 ? LEU A 58 ? THR A 690 LEU A 694 B 3 ALA A 75 ? VAL A 81 ? ALA A 711 VAL A 717 B 4 ARG A 21 ? LYS A 31 ? ARG A 657 LYS A 667 B 5 GLY A 9 ? SER A 18 ? GLY A 645 SER A 654 B 6 ALA A 192 ? GLN A 193 ? ALA A 828 GLN A 829 B 7 LEU A 98 ? ALA A 99 ? LEU A 734 ALA A 735 C 1 MSE A 122 ? VAL A 123 ? MSE A 758 VAL A 759 C 2 LEU A 153 ? ALA A 155 ? LEU A 789 ALA A 791 C 3 LEU A 161 ? LYS A 162 ? LEU A 797 LYS A 798 D 1 VAL A 127 ? GLU A 128 ? VAL A 763 GLU A 764 D 2 ASN A 131 ? LEU A 132 ? ASN A 767 LEU A 768 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 3 ? N VAL A 639 O VAL A 91 ? O VAL A 727 A 2 3 O LEU A 90 ? O LEU A 726 N GLN A 83 ? N GLN A 719 A 3 4 N ALA A 84 ? N ALA A 720 O VAL A 183 ? O VAL A 819 B 1 2 N ALA A 47 ? N ALA A 683 O ILE A 55 ? O ILE A 691 B 2 3 N TYR A 56 ? N TYR A 692 O ILE A 76 ? O ILE A 712 B 3 4 O THR A 77 ? O THR A 713 N VAL A 30 ? N VAL A 666 B 4 5 O PHE A 27 ? O PHE A 663 N LEU A 12 ? N LEU A 648 B 5 6 N LEU A 15 ? N LEU A 651 O GLN A 193 ? O GLN A 829 B 6 7 O ALA A 192 ? O ALA A 828 N ALA A 99 ? N ALA A 735 C 1 2 N MSE A 122 ? N MSE A 758 O ALA A 154 ? O ALA A 790 C 2 3 N LEU A 153 ? N LEU A 789 O LEU A 161 ? O LEU A 797 D 1 2 N GLU A 128 ? N GLU A 764 O ASN A 131 ? O ASN A 767 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 A 100' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A 101' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE GOL A 102' AC4 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE GOL A 103' AC5 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE BME A 104' AC6 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE URE A 105' AC7 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE CL A 106' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 SER A 102 ? SER A 738 . ? 1_555 ? 2 AC1 8 THR A 124 ? THR A 760 . ? 1_555 ? 3 AC1 8 GLY A 125 ? GLY A 761 . ? 1_555 ? 4 AC1 8 ASN A 135 ? ASN A 771 . ? 1_555 ? 5 AC1 8 LEU A 136 ? LEU A 772 . ? 1_555 ? 6 AC1 8 LEU A 137 ? LEU A 773 . ? 1_555 ? 7 AC1 8 ALA A 138 ? ALA A 774 . ? 1_555 ? 8 AC1 8 LYS A 141 ? LYS A 777 . ? 1_555 ? 9 AC2 4 HOH I . ? HOH A 7 . ? 1_555 ? 10 AC2 4 HOH I . ? HOH A 12 . ? 1_555 ? 11 AC2 4 LYS A 147 ? LYS A 783 . ? 1_555 ? 12 AC2 4 GLY A 150 ? GLY A 786 . ? 1_555 ? 13 AC3 2 ASN A 1 ? ASN A 637 . ? 4_565 ? 14 AC3 2 HIS A 37 ? HIS A 673 . ? 1_555 ? 15 AC4 8 GLY A 24 ? GLY A 660 . ? 1_555 ? 16 AC4 8 GLY A 25 ? GLY A 661 . ? 1_555 ? 17 AC4 8 LEU A 144 ? LEU A 780 . ? 1_555 ? 18 AC4 8 VAL A 145 ? VAL A 781 . ? 1_555 ? 19 AC4 8 ALA A 149 ? ALA A 785 . ? 1_555 ? 20 AC4 8 THR A 184 ? THR A 820 . ? 1_555 ? 21 AC4 8 PHE A 185 ? PHE A 821 . ? 1_555 ? 22 AC4 8 SER A 186 ? SER A 822 . ? 1_555 ? 23 AC5 8 GLY A 25 ? GLY A 661 . ? 1_555 ? 24 AC5 8 ALA A 26 ? ALA A 662 . ? 1_555 ? 25 AC5 8 PRO A 80 ? PRO A 716 . ? 1_555 ? 26 AC5 8 VAL A 81 ? VAL A 717 . ? 1_555 ? 27 AC5 8 PRO A 96 ? PRO A 732 . ? 1_555 ? 28 AC5 8 SER A 186 ? SER A 822 . ? 1_555 ? 29 AC5 8 SER A 187 ? SER A 823 . ? 1_555 ? 30 AC5 8 GLY A 188 ? GLY A 824 . ? 1_555 ? 31 AC6 5 HOH I . ? HOH A 15 . ? 1_555 ? 32 AC6 5 GLN A 117 ? GLN A 753 . ? 1_555 ? 33 AC6 5 VAL A 173 ? VAL A 809 . ? 1_555 ? 34 AC6 5 GLY A 174 ? GLY A 810 . ? 1_555 ? 35 AC6 5 LYS A 176 ? LYS A 812 . ? 1_555 ? 36 AC7 1 LYS A 162 ? LYS A 798 . ? 12_554 ? # _database_PDB_matrix.entry_id 3P06 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3P06 _atom_sites.fract_transf_matrix[1][1] 0.016909 _atom_sites.fract_transf_matrix[1][2] 0.009762 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019525 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004804 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 637 637 ASN ASN A . n A 1 2 GLY 2 638 638 GLY GLY A . n A 1 3 VAL 3 639 639 VAL VAL A . n A 1 4 GLU 4 640 640 GLU GLU A . n A 1 5 LEU 5 641 641 LEU LEU A . n A 1 6 SER 6 642 642 SER SER A . n A 1 7 ALA 7 643 643 ALA ALA A . n A 1 8 VAL 8 644 644 VAL VAL A . n A 1 9 GLY 9 645 645 GLY GLY A . n A 1 10 VAL 10 646 646 VAL VAL A . n A 1 11 LEU 11 647 647 LEU LEU A . n A 1 12 LEU 12 648 648 LEU LEU A . n A 1 13 PRO 13 649 649 PRO PRO A . n A 1 14 VAL 14 650 650 VAL VAL A . n A 1 15 LEU 15 651 651 LEU LEU A . n A 1 16 MSE 16 652 652 MSE MSE A . n A 1 17 ASP 17 653 653 ASP ASP A . n A 1 18 SER 18 654 654 SER SER A . n A 1 19 GLY 19 655 655 GLY GLY A . n A 1 20 ARG 20 656 656 ARG ARG A . n A 1 21 ARG 21 657 657 ARG ARG A . n A 1 22 ILE 22 658 658 ILE ILE A . n A 1 23 SER 23 659 659 SER SER A . n A 1 24 GLY 24 660 660 GLY GLY A . n A 1 25 GLY 25 661 661 GLY GLY A . n A 1 26 ALA 26 662 662 ALA ALA A . n A 1 27 PHE 27 663 663 PHE PHE A . n A 1 28 MSE 28 664 664 MSE MSE A . n A 1 29 ALA 29 665 665 ALA ALA A . n A 1 30 VAL 30 666 666 VAL VAL A . n A 1 31 LYS 31 667 667 LYS LYS A . n A 1 32 GLY 32 668 668 GLY GLY A . n A 1 33 ASP 33 669 669 ASP ASP A . n A 1 34 LEU 34 670 670 LEU LEU A . n A 1 35 SER 35 671 671 SER SER A . n A 1 36 GLU 36 672 672 GLU GLU A . n A 1 37 HIS 37 673 673 HIS HIS A . n A 1 38 ILE 38 674 674 ILE ILE A . n A 1 39 LYS 39 675 675 LYS LYS A . n A 1 40 ASN 40 676 676 ASN ASN A . n A 1 41 PRO 41 677 677 PRO PRO A . n A 1 42 LYS 42 678 678 LYS LYS A . n A 1 43 ASN 43 679 679 ASN ASN A . n A 1 44 THR 44 680 680 THR THR A . n A 1 45 ARG 45 681 681 ARG ARG A . n A 1 46 ILE 46 682 682 ILE ILE A . n A 1 47 ALA 47 683 683 ALA ALA A . n A 1 48 GLN 48 684 684 GLN GLN A . n A 1 49 THR 49 685 685 THR THR A . n A 1 50 VAL 50 686 686 VAL VAL A . n A 1 51 ALA 51 687 687 ALA ALA A . n A 1 52 GLY 52 688 688 GLY GLY A . n A 1 53 GLY 53 689 689 GLY GLY A . n A 1 54 THR 54 690 690 THR THR A . n A 1 55 ILE 55 691 691 ILE ILE A . n A 1 56 TYR 56 692 692 TYR TYR A . n A 1 57 GLY 57 693 693 GLY GLY A . n A 1 58 LEU 58 694 694 LEU LEU A . n A 1 59 SER 59 695 695 SER SER A . n A 1 60 GLU 60 696 696 GLU GLU A . n A 1 61 MSE 61 697 697 MSE MSE A . n A 1 62 VAL 62 698 698 VAL VAL A . n A 1 63 ASN 63 699 699 ASN ASN A . n A 1 64 ILE 64 700 700 ILE ILE A . n A 1 65 ASP 65 701 701 ASP ASP A . n A 1 66 GLU 66 702 702 GLU GLU A . n A 1 67 ALA 67 703 703 ALA ALA A . n A 1 68 GLU 68 704 704 GLU GLU A . n A 1 69 LYS 69 705 705 LYS LYS A . n A 1 70 LEU 70 706 706 LEU LEU A . n A 1 71 PRO 71 707 707 PRO PRO A . n A 1 72 ILE 72 708 708 ILE ILE A . n A 1 73 LYS 73 709 709 LYS LYS A . n A 1 74 GLY 74 710 710 GLY GLY A . n A 1 75 ALA 75 711 711 ALA ALA A . n A 1 76 ILE 76 712 712 ILE ILE A . n A 1 77 THR 77 713 713 THR THR A . n A 1 78 VAL 78 714 714 VAL VAL A . n A 1 79 LEU 79 715 715 LEU LEU A . n A 1 80 PRO 80 716 716 PRO PRO A . n A 1 81 VAL 81 717 717 VAL VAL A . n A 1 82 VAL 82 718 718 VAL VAL A . n A 1 83 GLN 83 719 719 GLN GLN A . n A 1 84 ALA 84 720 720 ALA ALA A . n A 1 85 THR 85 721 721 THR THR A . n A 1 86 ALA 86 722 722 ALA ALA A . n A 1 87 THR 87 723 723 THR THR A . n A 1 88 SER 88 724 724 SER SER A . n A 1 89 ILE 89 725 725 ILE ILE A . n A 1 90 LEU 90 726 726 LEU LEU A . n A 1 91 VAL 91 727 727 VAL VAL A . n A 1 92 PRO 92 728 728 PRO PRO A . n A 1 93 ASP 93 729 729 ASP ASP A . n A 1 94 ASN 94 730 730 ASN ASN A . n A 1 95 GLN 95 731 731 GLN GLN A . n A 1 96 PRO 96 732 732 PRO PRO A . n A 1 97 GLN 97 733 733 GLN GLN A . n A 1 98 LEU 98 734 734 LEU LEU A . n A 1 99 ALA 99 735 735 ALA ALA A . n A 1 100 PHE 100 736 736 PHE PHE A . n A 1 101 ASN 101 737 737 ASN ASN A . n A 1 102 SER 102 738 738 SER SER A . n A 1 103 TRP 103 739 739 TRP TRP A . n A 1 104 GLU 104 740 740 GLU GLU A . n A 1 105 ALA 105 741 741 ALA ALA A . n A 1 106 ALA 106 742 742 ALA ALA A . n A 1 107 ALA 107 743 743 ALA ALA A . n A 1 108 CYS 108 744 744 CYS CYS A . n A 1 109 ALA 109 745 745 ALA ALA A . n A 1 110 ALA 110 746 746 ALA ALA A . n A 1 111 ASP 111 747 747 ASP ASP A . n A 1 112 THR 112 748 748 THR THR A . n A 1 113 LEU 113 749 749 LEU LEU A . n A 1 114 GLU 114 750 750 GLU GLU A . n A 1 115 SER 115 751 751 SER SER A . n A 1 116 GLN 116 752 752 GLN GLN A . n A 1 117 GLN 117 753 753 GLN GLN A . n A 1 118 THR 118 754 754 THR THR A . n A 1 119 PRO 119 755 755 PRO PRO A . n A 1 120 PHE 120 756 756 PHE PHE A . n A 1 121 LEU 121 757 757 LEU LEU A . n A 1 122 MSE 122 758 758 MSE MSE A . n A 1 123 VAL 123 759 759 VAL VAL A . n A 1 124 THR 124 760 760 THR THR A . n A 1 125 GLY 125 761 761 GLY GLY A . n A 1 126 ALA 126 762 762 ALA ALA A . n A 1 127 VAL 127 763 763 VAL VAL A . n A 1 128 GLU 128 764 764 GLU GLU A . n A 1 129 SER 129 765 765 SER SER A . n A 1 130 GLY 130 766 766 GLY GLY A . n A 1 131 ASN 131 767 767 ASN ASN A . n A 1 132 LEU 132 768 768 LEU LEU A . n A 1 133 SER 133 769 769 SER SER A . n A 1 134 PRO 134 770 770 PRO PRO A . n A 1 135 ASN 135 771 771 ASN ASN A . n A 1 136 LEU 136 772 772 LEU LEU A . n A 1 137 LEU 137 773 773 LEU LEU A . n A 1 138 ALA 138 774 774 ALA ALA A . n A 1 139 VAL 139 775 775 VAL VAL A . n A 1 140 GLN 140 776 776 GLN GLN A . n A 1 141 LYS 141 777 777 LYS LYS A . n A 1 142 GLN 142 778 778 GLN GLN A . n A 1 143 LEU 143 779 779 LEU LEU A . n A 1 144 LEU 144 780 780 LEU LEU A . n A 1 145 VAL 145 781 781 VAL VAL A . n A 1 146 ALA 146 782 782 ALA ALA A . n A 1 147 LYS 147 783 783 LYS LYS A . n A 1 148 PRO 148 784 784 PRO PRO A . n A 1 149 ALA 149 785 785 ALA ALA A . n A 1 150 GLY 150 786 786 GLY GLY A . n A 1 151 ILE 151 787 787 ILE ILE A . n A 1 152 GLY 152 788 788 GLY GLY A . n A 1 153 LEU 153 789 789 LEU LEU A . n A 1 154 ALA 154 790 790 ALA ALA A . n A 1 155 ALA 155 791 791 ALA ALA A . n A 1 156 ASN 156 792 792 ASN ASN A . n A 1 157 SER 157 793 793 SER SER A . n A 1 158 ASP 158 794 794 ASP ASP A . n A 1 159 ARG 159 795 795 ARG ARG A . n A 1 160 ALA 160 796 796 ALA ALA A . n A 1 161 LEU 161 797 797 LEU LEU A . n A 1 162 LYS 162 798 798 LYS LYS A . n A 1 163 VAL 163 799 799 VAL VAL A . n A 1 164 VAL 164 800 800 VAL VAL A . n A 1 165 THR 165 801 801 THR THR A . n A 1 166 LEU 166 802 802 LEU LEU A . n A 1 167 GLU 167 803 803 GLU GLU A . n A 1 168 GLN 168 804 804 GLN GLN A . n A 1 169 LEU 169 805 805 LEU LEU A . n A 1 170 ARG 170 806 806 ARG ARG A . n A 1 171 GLN 171 807 807 GLN GLN A . n A 1 172 VAL 172 808 808 VAL VAL A . n A 1 173 VAL 173 809 809 VAL VAL A . n A 1 174 GLY 174 810 810 GLY GLY A . n A 1 175 ASP 175 811 811 ASP ASP A . n A 1 176 LYS 176 812 812 LYS LYS A . n A 1 177 PRO 177 813 813 PRO PRO A . n A 1 178 TRP 178 814 814 TRP TRP A . n A 1 179 ARG 179 815 815 ARG ARG A . n A 1 180 LYS 180 816 816 LYS LYS A . n A 1 181 PRO 181 817 817 PRO PRO A . n A 1 182 MSE 182 818 818 MSE MSE A . n A 1 183 VAL 183 819 819 VAL VAL A . n A 1 184 THR 184 820 820 THR THR A . n A 1 185 PHE 185 821 821 PHE PHE A . n A 1 186 SER 186 822 822 SER SER A . n A 1 187 SER 187 823 823 SER SER A . n A 1 188 GLY 188 824 824 GLY GLY A . n A 1 189 LYS 189 825 825 LYS LYS A . n A 1 190 ASN 190 826 826 ASN ASN A . n A 1 191 VAL 191 827 827 VAL VAL A . n A 1 192 ALA 192 828 828 ALA ALA A . n A 1 193 GLN 193 829 829 GLN GLN A . n A 1 194 ALA 194 830 830 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 100 100 SO4 SO4 A . C 3 GOL 1 101 101 GOL GOL A . D 3 GOL 1 102 102 GOL GOL A . E 3 GOL 1 103 103 GOL GOL A . F 4 BME 1 104 104 BME BME A . G 5 URE 1 105 105 URE URE A . H 6 CL 1 106 106 CL CL A . I 7 HOH 1 1 1 HOH HOH A . I 7 HOH 2 2 2 HOH HOH A . I 7 HOH 3 3 3 HOH HOH A . I 7 HOH 4 4 4 HOH HOH A . I 7 HOH 5 5 5 HOH HOH A . I 7 HOH 6 6 6 HOH HOH A . I 7 HOH 7 7 7 HOH HOH A . I 7 HOH 8 8 8 HOH HOH A . I 7 HOH 9 9 9 HOH HOH A . I 7 HOH 10 10 10 HOH HOH A . I 7 HOH 11 11 11 HOH HOH A . I 7 HOH 12 12 12 HOH HOH A . I 7 HOH 13 13 13 HOH HOH A . I 7 HOH 14 14 14 HOH HOH A . I 7 HOH 15 15 15 HOH HOH A . I 7 HOH 16 16 16 HOH HOH A . I 7 HOH 17 17 17 HOH HOH A . I 7 HOH 18 18 18 HOH HOH A . I 7 HOH 19 19 19 HOH HOH A . I 7 HOH 20 20 20 HOH HOH A . I 7 HOH 21 21 21 HOH HOH A . I 7 HOH 22 22 22 HOH HOH A . I 7 HOH 23 23 23 HOH HOH A . I 7 HOH 24 24 24 HOH HOH A . I 7 HOH 25 25 25 HOH HOH A . I 7 HOH 26 26 26 HOH HOH A . I 7 HOH 27 27 27 HOH HOH A . I 7 HOH 28 28 28 HOH HOH A . I 7 HOH 29 29 29 HOH HOH A . I 7 HOH 30 30 30 HOH HOH A . I 7 HOH 31 31 31 HOH HOH A . I 7 HOH 32 32 32 HOH HOH A . I 7 HOH 33 33 33 HOH HOH A . I 7 HOH 34 34 34 HOH HOH A . I 7 HOH 35 35 35 HOH HOH A . I 7 HOH 36 36 36 HOH HOH A . I 7 HOH 37 37 37 HOH HOH A . I 7 HOH 38 38 38 HOH HOH A . I 7 HOH 39 39 39 HOH HOH A . I 7 HOH 40 40 40 HOH HOH A . I 7 HOH 41 41 41 HOH HOH A . I 7 HOH 42 42 42 HOH HOH A . I 7 HOH 43 43 43 HOH HOH A . I 7 HOH 44 44 44 HOH HOH A . I 7 HOH 45 45 45 HOH HOH A . I 7 HOH 46 46 46 HOH HOH A . I 7 HOH 47 47 47 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 16 A MSE 652 ? MET SELENOMETHIONINE 2 A MSE 28 A MSE 664 ? MET SELENOMETHIONINE 3 A MSE 61 A MSE 697 ? MET SELENOMETHIONINE 4 A MSE 122 A MSE 758 ? MET SELENOMETHIONINE 5 A MSE 182 A MSE 818 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I 2 1,2 A,B,C,D,E,F,G,H,I 3 1,2,3,4 A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 4390 ? 2 MORE -51 ? 2 'SSA (A^2)' 15450 ? 3 'ABSA (A^2)' 11480 ? 3 MORE -155 ? 3 'SSA (A^2)' 28700 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -69.3806666667 4 'crystal symmetry operation' 12_554 x,x-y,-z-1/3 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -69.3806666667 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-02 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -8.4734 14.2418 -18.0287 0.0983 0.0840 0.0944 0.0225 -0.0484 -0.0121 2.4647 3.5219 1.8471 -1.6644 -0.5737 0.2362 0.0648 0.1334 -0.2991 -0.0673 -0.0676 0.4071 0.0658 -0.3428 0.0027 'X-RAY DIFFRACTION' 2 ? refined 0.1444 14.2549 -10.6512 0.1142 0.0242 0.1014 0.0108 -0.0400 -0.0058 1.1936 1.1832 2.3123 -0.2706 0.2426 0.1719 0.0773 -0.0973 -0.0910 0.1745 0.0277 -0.0532 0.0904 0.1115 -0.1050 'X-RAY DIFFRACTION' 3 ? refined 5.3892 15.3881 -25.9335 0.0823 0.0532 0.0981 0.0126 -0.0006 -0.0177 2.8957 2.5618 2.2086 -0.6013 -0.0588 0.2021 0.0007 -0.0121 0.0862 -0.0892 0.0794 -0.4584 -0.0171 0.2152 -0.0800 'X-RAY DIFFRACTION' 4 ? refined -8.9064 15.6744 -21.8862 0.0869 0.0949 0.0814 0.0172 -0.0216 -0.0088 2.6124 15.7599 6.2677 -1.4949 1.4984 -7.4892 0.0196 0.1674 -0.1219 -0.1192 0.4434 0.8148 0.2270 -0.3866 -0.4630 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 637 ? ? A 657 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 658 ? ? A 748 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 749 ? ? A 814 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 815 ? ? A 830 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Mx 'data collection' 'Data Collector' ? 1 PHENIX 'model building' Autosol ? 2 REFMAC refinement 5.5.0102 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 PHENIX phasing AUTOSOL ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 654 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 656 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 672 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 672 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.607 _pdbx_validate_rmsd_bond.bond_target_value 1.515 _pdbx_validate_rmsd_bond.bond_deviation 0.092 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.015 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 654 ? ? -109.34 62.67 2 1 ASN A 679 ? ? -90.81 46.06 3 1 PHE A 736 ? ? 75.13 -165.99 4 1 GLN A 752 ? ? 81.13 3.72 5 1 LEU A 757 ? ? -170.75 135.89 6 1 VAL A 781 ? ? -126.59 -61.92 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 BETA-MERCAPTOETHANOL BME 5 UREA URE 6 'CHLORIDE ION' CL 7 water HOH #