data_3PDF # _entry.id 3PDF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3PDF pdb_00003pdf 10.2210/pdb3pdf/pdb RCSB RCSB062242 ? ? WWPDB D_1000062242 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PDF _pdbx_database_status.recvd_initial_deposition_date 2010-10-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhao, B.' 1 'Laine, D.' 2 # _citation.id primary _citation.title 'Discovery of novel cyanamide-based inhibitors of cathepsin C.' _citation.journal_abbrev 'Acs Med.Chem.Lett.' _citation.journal_volume 2 _citation.page_first 142 _citation.page_last 147 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1948-5875 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24900293 _citation.pdbx_database_id_DOI 10.1021/ml100212k # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Laine, D.' 1 ? primary 'Palovich, M.' 2 ? primary 'McCleland, B.' 3 ? primary 'Petitjean, E.' 4 ? primary 'Delhom, I.' 5 ? primary 'Xie, H.' 6 ? primary 'Deng, J.' 7 ? primary 'Lin, G.' 8 ? primary 'Davis, R.' 9 ? primary 'Jolit, A.' 10 ? primary 'Nevins, N.' 11 ? primary 'Zhao, B.' 12 ? primary 'Villa, J.' 13 ? primary 'Schneck, J.' 14 ? primary 'McDevitt, P.' 15 ? primary 'Midgett, R.' 16 ? primary 'Kmett, C.' 17 ? primary 'Umbrecht, S.' 18 ? primary 'Peck, B.' 19 ? primary 'Davis, A.B.' 20 ? primary 'Bettoun, D.' 21 ? # _cell.entry_id 3PDF _cell.length_a 85.084 _cell.length_b 88.784 _cell.length_c 114.554 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PDF _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dipeptidyl peptidase 1' 49855.016 1 3.4.14.1 ? ? ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer syn '2,5-dibromo-N-{(3R,5S)-1-[(Z)-iminomethyl]-5-methylpyrrolidin-3-yl}benzenesulfonamide' 425.139 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 283 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cathepsin C' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQEKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAF FKYKEEGSKVTTYCNETMTGWVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQEKYSNRLYKYDHNFVKAINAIQKS WTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASM GMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSE YHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWI VKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPKLEN ; _entity_poly.pdbx_seq_one_letter_code_can ;DTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQEKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAF FKYKEEGSKVTTYCNETMTGWVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQEKYSNRLYKYDHNFVKAINAIQKS WTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASM GMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSE YHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWI VKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPKLEN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 THR n 1 3 PRO n 1 4 ALA n 1 5 ASN n 1 6 CYS n 1 7 THR n 1 8 TYR n 1 9 LEU n 1 10 ASP n 1 11 LEU n 1 12 LEU n 1 13 GLY n 1 14 THR n 1 15 TRP n 1 16 VAL n 1 17 PHE n 1 18 GLN n 1 19 VAL n 1 20 GLY n 1 21 SER n 1 22 SER n 1 23 GLY n 1 24 SER n 1 25 GLN n 1 26 ARG n 1 27 ASP n 1 28 VAL n 1 29 ASN n 1 30 CYS n 1 31 SER n 1 32 VAL n 1 33 MET n 1 34 GLY n 1 35 PRO n 1 36 GLN n 1 37 GLU n 1 38 LYS n 1 39 LYS n 1 40 VAL n 1 41 VAL n 1 42 VAL n 1 43 TYR n 1 44 LEU n 1 45 GLN n 1 46 LYS n 1 47 LEU n 1 48 ASP n 1 49 THR n 1 50 ALA n 1 51 TYR n 1 52 ASP n 1 53 ASP n 1 54 LEU n 1 55 GLY n 1 56 ASN n 1 57 SER n 1 58 GLY n 1 59 HIS n 1 60 PHE n 1 61 THR n 1 62 ILE n 1 63 ILE n 1 64 TYR n 1 65 ASN n 1 66 GLN n 1 67 GLY n 1 68 PHE n 1 69 GLU n 1 70 ILE n 1 71 VAL n 1 72 LEU n 1 73 ASN n 1 74 ASP n 1 75 TYR n 1 76 LYS n 1 77 TRP n 1 78 PHE n 1 79 ALA n 1 80 PHE n 1 81 PHE n 1 82 LYS n 1 83 TYR n 1 84 LYS n 1 85 GLU n 1 86 GLU n 1 87 GLY n 1 88 SER n 1 89 LYS n 1 90 VAL n 1 91 THR n 1 92 THR n 1 93 TYR n 1 94 CYS n 1 95 ASN n 1 96 GLU n 1 97 THR n 1 98 MET n 1 99 THR n 1 100 GLY n 1 101 TRP n 1 102 VAL n 1 103 HIS n 1 104 ASP n 1 105 VAL n 1 106 LEU n 1 107 GLY n 1 108 ARG n 1 109 ASN n 1 110 TRP n 1 111 ALA n 1 112 CYS n 1 113 PHE n 1 114 THR n 1 115 GLY n 1 116 LYS n 1 117 LYS n 1 118 VAL n 1 119 GLY n 1 120 THR n 1 121 ALA n 1 122 SER n 1 123 GLU n 1 124 ASN n 1 125 VAL n 1 126 TYR n 1 127 VAL n 1 128 ASN n 1 129 THR n 1 130 ALA n 1 131 HIS n 1 132 LEU n 1 133 LYS n 1 134 ASN n 1 135 SER n 1 136 GLN n 1 137 GLU n 1 138 LYS n 1 139 TYR n 1 140 SER n 1 141 ASN n 1 142 ARG n 1 143 LEU n 1 144 TYR n 1 145 LYS n 1 146 TYR n 1 147 ASP n 1 148 HIS n 1 149 ASN n 1 150 PHE n 1 151 VAL n 1 152 LYS n 1 153 ALA n 1 154 ILE n 1 155 ASN n 1 156 ALA n 1 157 ILE n 1 158 GLN n 1 159 LYS n 1 160 SER n 1 161 TRP n 1 162 THR n 1 163 ALA n 1 164 THR n 1 165 THR n 1 166 TYR n 1 167 MET n 1 168 GLU n 1 169 TYR n 1 170 GLU n 1 171 THR n 1 172 LEU n 1 173 THR n 1 174 LEU n 1 175 GLY n 1 176 ASP n 1 177 MET n 1 178 ILE n 1 179 ARG n 1 180 ARG n 1 181 SER n 1 182 GLY n 1 183 GLY n 1 184 HIS n 1 185 SER n 1 186 ARG n 1 187 LYS n 1 188 ILE n 1 189 PRO n 1 190 ARG n 1 191 PRO n 1 192 LYS n 1 193 PRO n 1 194 ALA n 1 195 PRO n 1 196 LEU n 1 197 THR n 1 198 ALA n 1 199 GLU n 1 200 ILE n 1 201 GLN n 1 202 GLN n 1 203 LYS n 1 204 ILE n 1 205 LEU n 1 206 PHE n 1 207 LEU n 1 208 PRO n 1 209 THR n 1 210 SER n 1 211 TRP n 1 212 ASP n 1 213 TRP n 1 214 ARG n 1 215 ASN n 1 216 VAL n 1 217 HIS n 1 218 GLY n 1 219 ILE n 1 220 ASN n 1 221 PHE n 1 222 VAL n 1 223 SER n 1 224 PRO n 1 225 VAL n 1 226 ARG n 1 227 ASN n 1 228 GLN n 1 229 ALA n 1 230 SER n 1 231 CYS n 1 232 GLY n 1 233 SER n 1 234 CYS n 1 235 TYR n 1 236 SER n 1 237 PHE n 1 238 ALA n 1 239 SER n 1 240 MET n 1 241 GLY n 1 242 MET n 1 243 LEU n 1 244 GLU n 1 245 ALA n 1 246 ARG n 1 247 ILE n 1 248 ARG n 1 249 ILE n 1 250 LEU n 1 251 THR n 1 252 ASN n 1 253 ASN n 1 254 SER n 1 255 GLN n 1 256 THR n 1 257 PRO n 1 258 ILE n 1 259 LEU n 1 260 SER n 1 261 PRO n 1 262 GLN n 1 263 GLU n 1 264 VAL n 1 265 VAL n 1 266 SER n 1 267 CYS n 1 268 SER n 1 269 GLN n 1 270 TYR n 1 271 ALA n 1 272 GLN n 1 273 GLY n 1 274 CYS n 1 275 GLU n 1 276 GLY n 1 277 GLY n 1 278 PHE n 1 279 PRO n 1 280 TYR n 1 281 LEU n 1 282 ILE n 1 283 ALA n 1 284 GLY n 1 285 LYS n 1 286 TYR n 1 287 ALA n 1 288 GLN n 1 289 ASP n 1 290 PHE n 1 291 GLY n 1 292 LEU n 1 293 VAL n 1 294 GLU n 1 295 GLU n 1 296 ALA n 1 297 CYS n 1 298 PHE n 1 299 PRO n 1 300 TYR n 1 301 THR n 1 302 GLY n 1 303 THR n 1 304 ASP n 1 305 SER n 1 306 PRO n 1 307 CYS n 1 308 LYS n 1 309 MET n 1 310 LYS n 1 311 GLU n 1 312 ASP n 1 313 CYS n 1 314 PHE n 1 315 ARG n 1 316 TYR n 1 317 TYR n 1 318 SER n 1 319 SER n 1 320 GLU n 1 321 TYR n 1 322 HIS n 1 323 TYR n 1 324 VAL n 1 325 GLY n 1 326 GLY n 1 327 PHE n 1 328 TYR n 1 329 GLY n 1 330 GLY n 1 331 CYS n 1 332 ASN n 1 333 GLU n 1 334 ALA n 1 335 LEU n 1 336 MET n 1 337 LYS n 1 338 LEU n 1 339 GLU n 1 340 LEU n 1 341 VAL n 1 342 HIS n 1 343 HIS n 1 344 GLY n 1 345 PRO n 1 346 MET n 1 347 ALA n 1 348 VAL n 1 349 ALA n 1 350 PHE n 1 351 GLU n 1 352 VAL n 1 353 TYR n 1 354 ASP n 1 355 ASP n 1 356 PHE n 1 357 LEU n 1 358 HIS n 1 359 TYR n 1 360 LYS n 1 361 LYS n 1 362 GLY n 1 363 ILE n 1 364 TYR n 1 365 HIS n 1 366 HIS n 1 367 THR n 1 368 GLY n 1 369 LEU n 1 370 ARG n 1 371 ASP n 1 372 PRO n 1 373 PHE n 1 374 ASN n 1 375 PRO n 1 376 PHE n 1 377 GLU n 1 378 LEU n 1 379 THR n 1 380 ASN n 1 381 HIS n 1 382 ALA n 1 383 VAL n 1 384 LEU n 1 385 LEU n 1 386 VAL n 1 387 GLY n 1 388 TYR n 1 389 GLY n 1 390 THR n 1 391 ASP n 1 392 SER n 1 393 ALA n 1 394 SER n 1 395 GLY n 1 396 MET n 1 397 ASP n 1 398 TYR n 1 399 TRP n 1 400 ILE n 1 401 VAL n 1 402 LYS n 1 403 ASN n 1 404 SER n 1 405 TRP n 1 406 GLY n 1 407 THR n 1 408 GLY n 1 409 TRP n 1 410 GLY n 1 411 GLU n 1 412 ASN n 1 413 GLY n 1 414 TYR n 1 415 PHE n 1 416 ARG n 1 417 ILE n 1 418 ARG n 1 419 ARG n 1 420 GLY n 1 421 THR n 1 422 ASP n 1 423 GLU n 1 424 CYS n 1 425 ALA n 1 426 ILE n 1 427 GLU n 1 428 SER n 1 429 ILE n 1 430 ALA n 1 431 VAL n 1 432 ALA n 1 433 ALA n 1 434 THR n 1 435 PRO n 1 436 ILE n 1 437 PRO n 1 438 LYS n 1 439 LEU n 1 440 GLU n 1 441 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CTSC, CPPI' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Cricetulus griseus' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 10029 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell 'CHO-Lec cell' _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CATC_HUMAN _struct_ref.pdbx_db_accession P53634 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DTPANCTYLDLLGTWVFQVGSSGSQRDVNCSVMGPQEKKVVVYLQKLDTAYDDLGNSGHFTIIYNQGFEIVLNDYKWFAF FKYKEEGSKVTTYCNETMTGWVHDVLGRNWACFTGKKVGTASENVYVNTAHLKNSQEKYSNRLYKYDHNFVKAINAIQKS WTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASM GMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSE YHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWI VKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPKL ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3PDF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 439 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P53634 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 463 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 439 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3PDF THR A 129 ? UNP P53634 ILE 153 conflict 129 1 1 3PDF PHE A 206 ? UNP P53634 HIS 230 conflict 206 2 1 3PDF GLU A 440 ? UNP P53634 ? ? 'expression tag' 440 3 1 3PDF ASN A 441 ? UNP P53634 ? ? 'expression tag' 441 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LXV non-polymer . '2,5-dibromo-N-{(3R,5S)-1-[(Z)-iminomethyl]-5-methylpyrrolidin-3-yl}benzenesulfonamide' ? 'C12 H15 Br2 N3 O2 S' 425.139 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3PDF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.31 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 173 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3PDF _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.85 _reflns.number_obs 39791 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3PDF _refine.ls_number_reflns_obs 33128 _refine.ls_number_reflns_all 3979 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.41 _refine.ls_d_res_high 1.85 _refine.ls_percent_reflns_obs 94.21 _refine.ls_R_factor_obs 0.19031 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18901 _refine.ls_R_factor_R_free 0.21038 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.9 _refine.ls_number_reflns_R_free 2086 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 17.814 _refine.aniso_B[1][1] 1.57 _refine.aniso_B[2][2] -0.48 _refine.aniso_B[3][3] -1.09 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.124 _refine.overall_SU_ML 0.084 _refine.overall_SU_B 2.756 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2763 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 77 _refine_hist.number_atoms_solvent 283 _refine_hist.number_atoms_total 3123 _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 44.41 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.022 ? 2932 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1916 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.007 1.954 ? 3991 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.767 3.005 ? 4609 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.543 5.000 ? 348 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.558 23.926 ? 135 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.998 15.000 ? 425 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.397 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.056 0.200 ? 419 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 3270 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 631 'X-RAY DIFFRACTION' ? r_nbd_refined 0.184 0.200 ? 628 'X-RAY DIFFRACTION' ? r_nbd_other 0.181 0.200 ? 1983 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.186 0.200 ? 1445 'X-RAY DIFFRACTION' ? r_nbtor_other 0.084 0.200 ? 1401 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.106 0.200 ? 235 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.141 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.211 0.200 ? 51 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.085 0.200 ? 21 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.412 1.500 ? 1761 'X-RAY DIFFRACTION' ? r_mcbond_other 0.056 1.500 ? 723 'X-RAY DIFFRACTION' ? r_mcangle_it 0.731 2.000 ? 2774 'X-RAY DIFFRACTION' ? r_scbond_it 0.838 3.000 ? 1364 'X-RAY DIFFRACTION' ? r_scangle_it 1.324 4.500 ? 1217 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.850 _refine_ls_shell.d_res_low 1.898 _refine_ls_shell.number_reflns_R_work 2218 _refine_ls_shell.R_factor_R_work 0.236 _refine_ls_shell.percent_reflns_obs 86.18 _refine_ls_shell.R_factor_R_free 0.243 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 127 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3PDF _struct.title 'Discovery of Novel Cyanamide-Based Inhibitors of Cathepsin C' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PDF _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'Two domains, Cystein Protease, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 7 ? LEU A 12 ? THR A 7 LEU A 12 1 ? 6 HELX_P HELX_P2 2 ASN A 29 ? MET A 33 ? ASN A 29 MET A 33 5 ? 5 HELX_P HELX_P3 3 SER A 233 ? ASN A 252 ? SER A 233 ASN A 252 1 ? 20 HELX_P HELX_P4 4 SER A 260 ? SER A 268 ? SER A 260 SER A 268 1 ? 9 HELX_P HELX_P5 5 GLN A 272 ? GLY A 276 ? GLN A 272 GLY A 276 5 ? 5 HELX_P HELX_P6 6 PHE A 278 ? ALA A 283 ? PHE A 278 ALA A 283 1 ? 6 HELX_P HELX_P7 7 GLY A 284 ? PHE A 290 ? GLY A 284 PHE A 290 1 ? 7 HELX_P HELX_P8 8 GLU A 294 ? PHE A 298 ? GLU A 294 PHE A 298 5 ? 5 HELX_P HELX_P9 9 ASN A 332 ? GLY A 344 ? ASN A 332 GLY A 344 1 ? 13 HELX_P HELX_P10 10 TYR A 353 ? TYR A 359 ? TYR A 353 TYR A 359 5 ? 7 HELX_P HELX_P11 11 ASP A 422 ? ILE A 426 ? ASP A 422 ILE A 426 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 6 A CYS 94 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 112 SG ? ? A CYS 30 A CYS 112 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 231 SG ? ? ? 1_555 A CYS 274 SG ? ? A CYS 231 A CYS 274 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? A CYS 267 SG ? ? ? 1_555 A CYS 307 SG ? ? A CYS 267 A CYS 307 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf5 disulf ? ? A CYS 297 SG ? ? ? 1_555 A CYS 313 SG ? ? A CYS 297 A CYS 313 1_555 ? ? ? ? ? ? ? 2.022 ? ? covale1 covale one ? A ASN 5 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 5 A NAG 604 1_555 ? ? ? ? ? ? ? 1.446 ? N-Glycosylation covale2 covale one ? A ASN 95 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 95 A NAG 603 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale3 covale none ? A CYS 234 SG ? ? ? 1_555 C LXV . C18 ? ? A CYS 234 A LXV 442 1_555 ? ? ? ? ? ? ? 1.625 ? ? covale4 covale one ? A ASN 252 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 252 B NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale5 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.442 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 46 A . ? LYS 46 A LEU 47 A ? LEU 47 A 1 4.10 2 ASP 371 A . ? ASP 371 A PRO 372 A ? PRO 372 A 1 -11.77 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 12 ? B ? 3 ? C ? 5 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 75 ? GLU A 86 ? TYR A 75 GLU A 86 A 2 LYS A 89 ? THR A 97 ? LYS A 89 THR A 97 A 3 TRP A 110 ? LYS A 117 ? TRP A 110 LYS A 117 A 4 TYR A 75 ? GLU A 86 ? TYR A 75 GLU A 86 A 5 GLY A 67 ? LEU A 72 ? GLY A 67 LEU A 72 A 6 SER A 57 ? ILE A 63 ? SER A 57 ILE A 63 A 7 THR A 49 ? ASP A 52 ? THR A 49 ASP A 52 A 8 GLN A 36 ? GLN A 45 ? GLN A 36 GLN A 45 A 9 GLY A 13 ? SER A 24 ? GLY A 13 SER A 24 A 10 TRP A 110 ? LYS A 117 ? TRP A 110 LYS A 117 A 11 GLY A 100 ? ASP A 104 ? GLY A 100 ASP A 104 A 12 TRP A 110 ? LYS A 117 ? TRP A 110 LYS A 117 B 1 TRP A 211 ? ASP A 212 ? TRP A 211 ASP A 212 B 2 HIS A 381 ? THR A 390 ? HIS A 381 THR A 390 B 3 MET A 346 ? PHE A 350 ? MET A 346 PHE A 350 C 1 TRP A 211 ? ASP A 212 ? TRP A 211 ASP A 212 C 2 HIS A 381 ? THR A 390 ? HIS A 381 THR A 390 C 3 ASP A 397 ? LYS A 402 ? ASP A 397 LYS A 402 C 4 TYR A 414 ? ARG A 418 ? TYR A 414 ARG A 418 C 5 ILE A 363 ? TYR A 364 ? ILE A 363 TYR A 364 D 1 SER A 318 ? TYR A 323 ? SER A 318 TYR A 323 D 2 VAL A 431 ? PRO A 435 ? VAL A 431 PRO A 435 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 82 ? N LYS A 82 O TYR A 93 ? O TYR A 93 A 2 3 N ASN A 95 ? N ASN A 95 O LYS A 117 ? O LYS A 117 A 4 5 O TRP A 77 ? O TRP A 77 N ILE A 70 ? N ILE A 70 A 5 6 O GLY A 67 ? O GLY A 67 N ILE A 63 ? N ILE A 63 A 6 7 O GLY A 58 ? O GLY A 58 N ALA A 50 ? N ALA A 50 A 7 8 O TYR A 51 ? O TYR A 51 N TYR A 43 ? N TYR A 43 A 8 9 O VAL A 40 ? O VAL A 40 N PHE A 17 ? N PHE A 17 A 9 10 N GLY A 20 ? N GLY A 20 O CYS A 112 ? O CYS A 112 A 10 11 O PHE A 113 ? O PHE A 113 N GLY A 100 ? N GLY A 100 A 11 12 N GLY A 100 ? N GLY A 100 O PHE A 113 ? O PHE A 113 B 1 2 N TRP A 211 ? N TRP A 211 O TYR A 388 ? O TYR A 388 B 2 3 O LEU A 385 ? O LEU A 385 N MET A 346 ? N MET A 346 C 1 2 N TRP A 211 ? N TRP A 211 O TYR A 388 ? O TYR A 388 C 2 3 N LEU A 384 ? N LEU A 384 O LYS A 402 ? O LYS A 402 C 3 4 N VAL A 401 ? N VAL A 401 O PHE A 415 ? O PHE A 415 C 4 5 O ARG A 416 ? O ARG A 416 N TYR A 364 ? N TYR A 364 D 1 2 N GLU A 320 ? N GLU A 320 O THR A 434 ? O THR A 434 # _database_PDB_matrix.entry_id 3PDF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3PDF _atom_sites.fract_transf_matrix[1][1] 0.011753 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011263 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008730 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 TRP 15 15 15 TRP TRP A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 HIS 59 59 59 HIS HIS A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 TRP 77 77 77 TRP TRP A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 TYR 93 93 93 TYR TYR A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 MET 98 98 98 MET MET A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 TRP 101 101 101 TRP TRP A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 HIS 103 103 103 HIS HIS A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 TRP 110 110 110 TRP TRP A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 GLY 119 119 ? ? ? A . n A 1 120 THR 120 120 ? ? ? A . n A 1 121 ALA 121 121 ? ? ? A . n A 1 122 SER 122 122 ? ? ? A . n A 1 123 GLU 123 123 ? ? ? A . n A 1 124 ASN 124 124 ? ? ? A . n A 1 125 VAL 125 125 ? ? ? A . n A 1 126 TYR 126 126 ? ? ? A . n A 1 127 VAL 127 127 ? ? ? A . n A 1 128 ASN 128 128 ? ? ? A . n A 1 129 THR 129 129 ? ? ? A . n A 1 130 ALA 130 130 ? ? ? A . n A 1 131 HIS 131 131 ? ? ? A . n A 1 132 LEU 132 132 ? ? ? A . n A 1 133 LYS 133 133 ? ? ? A . n A 1 134 ASN 134 134 ? ? ? A . n A 1 135 SER 135 135 ? ? ? A . n A 1 136 GLN 136 136 ? ? ? A . n A 1 137 GLU 137 137 ? ? ? A . n A 1 138 LYS 138 138 ? ? ? A . n A 1 139 TYR 139 139 ? ? ? A . n A 1 140 SER 140 140 ? ? ? A . n A 1 141 ASN 141 141 ? ? ? A . n A 1 142 ARG 142 142 ? ? ? A . n A 1 143 LEU 143 143 ? ? ? A . n A 1 144 TYR 144 144 ? ? ? A . n A 1 145 LYS 145 145 ? ? ? A . n A 1 146 TYR 146 146 ? ? ? A . n A 1 147 ASP 147 147 ? ? ? A . n A 1 148 HIS 148 148 ? ? ? A . n A 1 149 ASN 149 149 ? ? ? A . n A 1 150 PHE 150 150 ? ? ? A . n A 1 151 VAL 151 151 ? ? ? A . n A 1 152 LYS 152 152 ? ? ? A . n A 1 153 ALA 153 153 ? ? ? A . n A 1 154 ILE 154 154 ? ? ? A . n A 1 155 ASN 155 155 ? ? ? A . n A 1 156 ALA 156 156 ? ? ? A . n A 1 157 ILE 157 157 ? ? ? A . n A 1 158 GLN 158 158 ? ? ? A . n A 1 159 LYS 159 159 ? ? ? A . n A 1 160 SER 160 160 ? ? ? A . n A 1 161 TRP 161 161 ? ? ? A . n A 1 162 THR 162 162 ? ? ? A . n A 1 163 ALA 163 163 ? ? ? A . n A 1 164 THR 164 164 ? ? ? A . n A 1 165 THR 165 165 ? ? ? A . n A 1 166 TYR 166 166 ? ? ? A . n A 1 167 MET 167 167 ? ? ? A . n A 1 168 GLU 168 168 ? ? ? A . n A 1 169 TYR 169 169 ? ? ? A . n A 1 170 GLU 170 170 ? ? ? A . n A 1 171 THR 171 171 ? ? ? A . n A 1 172 LEU 172 172 ? ? ? A . n A 1 173 THR 173 173 ? ? ? A . n A 1 174 LEU 174 174 ? ? ? A . n A 1 175 GLY 175 175 ? ? ? A . n A 1 176 ASP 176 176 ? ? ? A . n A 1 177 MET 177 177 ? ? ? A . n A 1 178 ILE 178 178 ? ? ? A . n A 1 179 ARG 179 179 ? ? ? A . n A 1 180 ARG 180 180 ? ? ? A . n A 1 181 SER 181 181 ? ? ? A . n A 1 182 GLY 182 182 ? ? ? A . n A 1 183 GLY 183 183 ? ? ? A . n A 1 184 HIS 184 184 ? ? ? A . n A 1 185 SER 185 185 ? ? ? A . n A 1 186 ARG 186 186 ? ? ? A . n A 1 187 LYS 187 187 ? ? ? A . n A 1 188 ILE 188 188 ? ? ? A . n A 1 189 PRO 189 189 ? ? ? A . n A 1 190 ARG 190 190 ? ? ? A . n A 1 191 PRO 191 191 ? ? ? A . n A 1 192 LYS 192 192 ? ? ? A . n A 1 193 PRO 193 193 ? ? ? A . n A 1 194 ALA 194 194 ? ? ? A . n A 1 195 PRO 195 195 ? ? ? A . n A 1 196 LEU 196 196 ? ? ? A . n A 1 197 THR 197 197 ? ? ? A . n A 1 198 ALA 198 198 ? ? ? A . n A 1 199 GLU 199 199 ? ? ? A . n A 1 200 ILE 200 200 ? ? ? A . n A 1 201 GLN 201 201 ? ? ? A . n A 1 202 GLN 202 202 ? ? ? A . n A 1 203 LYS 203 203 ? ? ? A . n A 1 204 ILE 204 204 ? ? ? A . n A 1 205 LEU 205 205 ? ? ? A . n A 1 206 PHE 206 206 206 PHE PHE A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 TRP 211 211 211 TRP TRP A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 TRP 213 213 213 TRP TRP A . n A 1 214 ARG 214 214 214 ARG ARG A . n A 1 215 ASN 215 215 215 ASN ASN A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 HIS 217 217 217 HIS HIS A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 ASN 220 220 220 ASN ASN A . n A 1 221 PHE 221 221 221 PHE PHE A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 SER 223 223 223 SER SER A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 VAL 225 225 225 VAL VAL A . n A 1 226 ARG 226 226 226 ARG ARG A . n A 1 227 ASN 227 227 227 ASN ASN A . n A 1 228 GLN 228 228 228 GLN GLN A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 SER 230 230 230 SER SER A . n A 1 231 CYS 231 231 231 CYS CYS A . n A 1 232 GLY 232 232 232 GLY GLY A . n A 1 233 SER 233 233 233 SER SER A . n A 1 234 CYS 234 234 234 CYS CYS A . n A 1 235 TYR 235 235 235 TYR TYR A . n A 1 236 SER 236 236 236 SER SER A . n A 1 237 PHE 237 237 237 PHE PHE A . n A 1 238 ALA 238 238 238 ALA ALA A . n A 1 239 SER 239 239 239 SER SER A . n A 1 240 MET 240 240 240 MET MET A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 MET 242 242 242 MET MET A . n A 1 243 LEU 243 243 243 LEU LEU A . n A 1 244 GLU 244 244 244 GLU GLU A . n A 1 245 ALA 245 245 245 ALA ALA A . n A 1 246 ARG 246 246 246 ARG ARG A . n A 1 247 ILE 247 247 247 ILE ILE A . n A 1 248 ARG 248 248 248 ARG ARG A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 THR 251 251 251 THR THR A . n A 1 252 ASN 252 252 252 ASN ASN A . n A 1 253 ASN 253 253 253 ASN ASN A . n A 1 254 SER 254 254 254 SER SER A . n A 1 255 GLN 255 255 255 GLN GLN A . n A 1 256 THR 256 256 256 THR THR A . n A 1 257 PRO 257 257 257 PRO PRO A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 SER 260 260 260 SER SER A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 GLU 263 263 263 GLU GLU A . n A 1 264 VAL 264 264 264 VAL VAL A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 SER 266 266 266 SER SER A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 SER 268 268 268 SER SER A . n A 1 269 GLN 269 269 269 GLN GLN A . n A 1 270 TYR 270 270 270 TYR TYR A . n A 1 271 ALA 271 271 271 ALA ALA A . n A 1 272 GLN 272 272 272 GLN GLN A . n A 1 273 GLY 273 273 273 GLY GLY A . n A 1 274 CYS 274 274 274 CYS CYS A . n A 1 275 GLU 275 275 275 GLU GLU A . n A 1 276 GLY 276 276 276 GLY GLY A . n A 1 277 GLY 277 277 277 GLY GLY A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 PRO 279 279 279 PRO PRO A . n A 1 280 TYR 280 280 280 TYR TYR A . n A 1 281 LEU 281 281 281 LEU LEU A . n A 1 282 ILE 282 282 282 ILE ILE A . n A 1 283 ALA 283 283 283 ALA ALA A . n A 1 284 GLY 284 284 284 GLY GLY A . n A 1 285 LYS 285 285 285 LYS LYS A . n A 1 286 TYR 286 286 286 TYR TYR A . n A 1 287 ALA 287 287 287 ALA ALA A . n A 1 288 GLN 288 288 288 GLN GLN A . n A 1 289 ASP 289 289 289 ASP ASP A . n A 1 290 PHE 290 290 290 PHE PHE A . n A 1 291 GLY 291 291 291 GLY GLY A . n A 1 292 LEU 292 292 292 LEU LEU A . n A 1 293 VAL 293 293 293 VAL VAL A . n A 1 294 GLU 294 294 294 GLU GLU A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 CYS 297 297 297 CYS CYS A . n A 1 298 PHE 298 298 298 PHE PHE A . n A 1 299 PRO 299 299 299 PRO PRO A . n A 1 300 TYR 300 300 300 TYR TYR A . n A 1 301 THR 301 301 301 THR THR A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 THR 303 303 303 THR THR A . n A 1 304 ASP 304 304 304 ASP ASP A . n A 1 305 SER 305 305 305 SER SER A . n A 1 306 PRO 306 306 306 PRO PRO A . n A 1 307 CYS 307 307 307 CYS CYS A . n A 1 308 LYS 308 308 308 LYS LYS A . n A 1 309 MET 309 309 309 MET MET A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 GLU 311 311 311 GLU GLU A . n A 1 312 ASP 312 312 312 ASP ASP A . n A 1 313 CYS 313 313 313 CYS CYS A . n A 1 314 PHE 314 314 314 PHE PHE A . n A 1 315 ARG 315 315 315 ARG ARG A . n A 1 316 TYR 316 316 316 TYR TYR A . n A 1 317 TYR 317 317 317 TYR TYR A . n A 1 318 SER 318 318 318 SER SER A . n A 1 319 SER 319 319 319 SER SER A . n A 1 320 GLU 320 320 320 GLU GLU A . n A 1 321 TYR 321 321 321 TYR TYR A . n A 1 322 HIS 322 322 322 HIS HIS A . n A 1 323 TYR 323 323 323 TYR TYR A . n A 1 324 VAL 324 324 324 VAL VAL A . n A 1 325 GLY 325 325 325 GLY GLY A . n A 1 326 GLY 326 326 326 GLY GLY A . n A 1 327 PHE 327 327 327 PHE PHE A . n A 1 328 TYR 328 328 328 TYR TYR A . n A 1 329 GLY 329 329 329 GLY GLY A . n A 1 330 GLY 330 330 330 GLY GLY A . n A 1 331 CYS 331 331 331 CYS CYS A . n A 1 332 ASN 332 332 332 ASN ASN A . n A 1 333 GLU 333 333 333 GLU GLU A . n A 1 334 ALA 334 334 334 ALA ALA A . n A 1 335 LEU 335 335 335 LEU LEU A . n A 1 336 MET 336 336 336 MET MET A . n A 1 337 LYS 337 337 337 LYS LYS A . n A 1 338 LEU 338 338 338 LEU LEU A . n A 1 339 GLU 339 339 339 GLU GLU A . n A 1 340 LEU 340 340 340 LEU LEU A . n A 1 341 VAL 341 341 341 VAL VAL A . n A 1 342 HIS 342 342 342 HIS HIS A . n A 1 343 HIS 343 343 343 HIS HIS A . n A 1 344 GLY 344 344 344 GLY GLY A . n A 1 345 PRO 345 345 345 PRO PRO A . n A 1 346 MET 346 346 346 MET MET A . n A 1 347 ALA 347 347 347 ALA ALA A . n A 1 348 VAL 348 348 348 VAL VAL A . n A 1 349 ALA 349 349 349 ALA ALA A . n A 1 350 PHE 350 350 350 PHE PHE A . n A 1 351 GLU 351 351 351 GLU GLU A . n A 1 352 VAL 352 352 352 VAL VAL A . n A 1 353 TYR 353 353 353 TYR TYR A . n A 1 354 ASP 354 354 354 ASP ASP A . n A 1 355 ASP 355 355 355 ASP ASP A . n A 1 356 PHE 356 356 356 PHE PHE A . n A 1 357 LEU 357 357 357 LEU LEU A . n A 1 358 HIS 358 358 358 HIS HIS A . n A 1 359 TYR 359 359 359 TYR TYR A . n A 1 360 LYS 360 360 360 LYS LYS A . n A 1 361 LYS 361 361 361 LYS LYS A . n A 1 362 GLY 362 362 362 GLY GLY A . n A 1 363 ILE 363 363 363 ILE ILE A . n A 1 364 TYR 364 364 364 TYR TYR A . n A 1 365 HIS 365 365 365 HIS HIS A . n A 1 366 HIS 366 366 366 HIS HIS A . n A 1 367 THR 367 367 367 THR THR A . n A 1 368 GLY 368 368 ? ? ? A . n A 1 369 LEU 369 369 ? ? ? A . n A 1 370 ARG 370 370 ? ? ? A . n A 1 371 ASP 371 371 371 ASP ASP A . n A 1 372 PRO 372 372 372 PRO PRO A . n A 1 373 PHE 373 373 373 PHE PHE A . n A 1 374 ASN 374 374 374 ASN ASN A . n A 1 375 PRO 375 375 375 PRO PRO A . n A 1 376 PHE 376 376 376 PHE PHE A . n A 1 377 GLU 377 377 377 GLU GLU A . n A 1 378 LEU 378 378 378 LEU LEU A . n A 1 379 THR 379 379 379 THR THR A . n A 1 380 ASN 380 380 380 ASN ASN A . n A 1 381 HIS 381 381 381 HIS HIS A . n A 1 382 ALA 382 382 382 ALA ALA A . n A 1 383 VAL 383 383 383 VAL VAL A . n A 1 384 LEU 384 384 384 LEU LEU A . n A 1 385 LEU 385 385 385 LEU LEU A . n A 1 386 VAL 386 386 386 VAL VAL A . n A 1 387 GLY 387 387 387 GLY GLY A . n A 1 388 TYR 388 388 388 TYR TYR A . n A 1 389 GLY 389 389 389 GLY GLY A . n A 1 390 THR 390 390 390 THR THR A . n A 1 391 ASP 391 391 391 ASP ASP A . n A 1 392 SER 392 392 392 SER SER A . n A 1 393 ALA 393 393 393 ALA ALA A . n A 1 394 SER 394 394 394 SER SER A . n A 1 395 GLY 395 395 395 GLY GLY A . n A 1 396 MET 396 396 396 MET MET A . n A 1 397 ASP 397 397 397 ASP ASP A . n A 1 398 TYR 398 398 398 TYR TYR A . n A 1 399 TRP 399 399 399 TRP TRP A . n A 1 400 ILE 400 400 400 ILE ILE A . n A 1 401 VAL 401 401 401 VAL VAL A . n A 1 402 LYS 402 402 402 LYS LYS A . n A 1 403 ASN 403 403 403 ASN ASN A . n A 1 404 SER 404 404 404 SER SER A . n A 1 405 TRP 405 405 405 TRP TRP A . n A 1 406 GLY 406 406 406 GLY GLY A . n A 1 407 THR 407 407 407 THR THR A . n A 1 408 GLY 408 408 408 GLY GLY A . n A 1 409 TRP 409 409 409 TRP TRP A . n A 1 410 GLY 410 410 410 GLY GLY A . n A 1 411 GLU 411 411 411 GLU GLU A . n A 1 412 ASN 412 412 412 ASN ASN A . n A 1 413 GLY 413 413 413 GLY GLY A . n A 1 414 TYR 414 414 414 TYR TYR A . n A 1 415 PHE 415 415 415 PHE PHE A . n A 1 416 ARG 416 416 416 ARG ARG A . n A 1 417 ILE 417 417 417 ILE ILE A . n A 1 418 ARG 418 418 418 ARG ARG A . n A 1 419 ARG 419 419 419 ARG ARG A . n A 1 420 GLY 420 420 420 GLY GLY A . n A 1 421 THR 421 421 421 THR THR A . n A 1 422 ASP 422 422 422 ASP ASP A . n A 1 423 GLU 423 423 423 GLU GLU A . n A 1 424 CYS 424 424 424 CYS CYS A . n A 1 425 ALA 425 425 425 ALA ALA A . n A 1 426 ILE 426 426 426 ILE ILE A . n A 1 427 GLU 427 427 427 GLU GLU A . n A 1 428 SER 428 428 428 SER SER A . n A 1 429 ILE 429 429 429 ILE ILE A . n A 1 430 ALA 430 430 430 ALA ALA A . n A 1 431 VAL 431 431 431 VAL VAL A . n A 1 432 ALA 432 432 432 ALA ALA A . n A 1 433 ALA 433 433 433 ALA ALA A . n A 1 434 THR 434 434 434 THR THR A . n A 1 435 PRO 435 435 435 PRO PRO A . n A 1 436 ILE 436 436 436 ILE ILE A . n A 1 437 PRO 437 437 437 PRO PRO A . n A 1 438 LYS 438 438 438 LYS LYS A . n A 1 439 LEU 439 439 439 LEU LEU A . n A 1 440 GLU 440 440 440 GLU GLU A . n A 1 441 ASN 441 441 441 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 LXV 1 442 1 LXV LXV A . D 4 NAG 1 603 603 NAG NAG A . E 4 NAG 1 604 604 NAG NAG A . F 5 CL 1 443 1 CL CL A . G 6 HOH 1 444 1 HOH HOH A . G 6 HOH 2 445 2 HOH HOH A . G 6 HOH 3 446 3 HOH HOH A . G 6 HOH 4 447 4 HOH HOH A . G 6 HOH 5 448 5 HOH HOH A . G 6 HOH 6 449 6 HOH HOH A . G 6 HOH 7 450 7 HOH HOH A . G 6 HOH 8 451 8 HOH HOH A . G 6 HOH 9 452 9 HOH HOH A . G 6 HOH 10 453 10 HOH HOH A . G 6 HOH 11 454 11 HOH HOH A . G 6 HOH 12 455 12 HOH HOH A . G 6 HOH 13 456 13 HOH HOH A . G 6 HOH 14 457 14 HOH HOH A . G 6 HOH 15 458 15 HOH HOH A . G 6 HOH 16 459 16 HOH HOH A . G 6 HOH 17 460 17 HOH HOH A . G 6 HOH 18 461 18 HOH HOH A . G 6 HOH 19 462 19 HOH HOH A . G 6 HOH 20 463 20 HOH HOH A . G 6 HOH 21 464 21 HOH HOH A . G 6 HOH 22 465 22 HOH HOH A . G 6 HOH 23 466 23 HOH HOH A . G 6 HOH 24 467 24 HOH HOH A . G 6 HOH 25 468 25 HOH HOH A . G 6 HOH 26 469 26 HOH HOH A . G 6 HOH 27 470 27 HOH HOH A . G 6 HOH 28 471 28 HOH HOH A . G 6 HOH 29 472 29 HOH HOH A . G 6 HOH 30 473 30 HOH HOH A . G 6 HOH 31 474 31 HOH HOH A . G 6 HOH 32 475 32 HOH HOH A . G 6 HOH 33 476 33 HOH HOH A . G 6 HOH 34 477 34 HOH HOH A . G 6 HOH 35 478 35 HOH HOH A . G 6 HOH 36 479 36 HOH HOH A . G 6 HOH 37 480 37 HOH HOH A . G 6 HOH 38 481 38 HOH HOH A . G 6 HOH 39 482 39 HOH HOH A . G 6 HOH 40 483 40 HOH HOH A . G 6 HOH 41 484 41 HOH HOH A . G 6 HOH 42 485 42 HOH HOH A . G 6 HOH 43 486 43 HOH HOH A . G 6 HOH 44 487 44 HOH HOH A . G 6 HOH 45 488 45 HOH HOH A . G 6 HOH 46 489 46 HOH HOH A . G 6 HOH 47 490 47 HOH HOH A . G 6 HOH 48 491 48 HOH HOH A . G 6 HOH 49 492 49 HOH HOH A . G 6 HOH 50 493 50 HOH HOH A . G 6 HOH 51 494 51 HOH HOH A . G 6 HOH 52 495 52 HOH HOH A . G 6 HOH 53 496 53 HOH HOH A . G 6 HOH 54 497 54 HOH HOH A . G 6 HOH 55 498 55 HOH HOH A . G 6 HOH 56 499 56 HOH HOH A . G 6 HOH 57 500 57 HOH HOH A . G 6 HOH 58 501 58 HOH HOH A . G 6 HOH 59 502 59 HOH HOH A . G 6 HOH 60 503 60 HOH HOH A . G 6 HOH 61 504 61 HOH HOH A . G 6 HOH 62 505 62 HOH HOH A . G 6 HOH 63 506 63 HOH HOH A . G 6 HOH 64 507 64 HOH HOH A . G 6 HOH 65 508 65 HOH HOH A . G 6 HOH 66 509 66 HOH HOH A . G 6 HOH 67 510 67 HOH HOH A . G 6 HOH 68 511 68 HOH HOH A . G 6 HOH 69 512 69 HOH HOH A . G 6 HOH 70 513 70 HOH HOH A . G 6 HOH 71 514 71 HOH HOH A . G 6 HOH 72 515 72 HOH HOH A . G 6 HOH 73 516 73 HOH HOH A . G 6 HOH 74 517 74 HOH HOH A . G 6 HOH 75 518 75 HOH HOH A . G 6 HOH 76 519 76 HOH HOH A . G 6 HOH 77 520 77 HOH HOH A . G 6 HOH 78 521 78 HOH HOH A . G 6 HOH 79 522 79 HOH HOH A . G 6 HOH 80 523 80 HOH HOH A . G 6 HOH 81 524 81 HOH HOH A . G 6 HOH 82 525 82 HOH HOH A . G 6 HOH 83 526 83 HOH HOH A . G 6 HOH 84 527 84 HOH HOH A . G 6 HOH 85 528 85 HOH HOH A . G 6 HOH 86 529 86 HOH HOH A . G 6 HOH 87 530 87 HOH HOH A . G 6 HOH 88 531 88 HOH HOH A . G 6 HOH 89 532 90 HOH HOH A . G 6 HOH 90 533 91 HOH HOH A . G 6 HOH 91 534 92 HOH HOH A . G 6 HOH 92 535 93 HOH HOH A . G 6 HOH 93 536 94 HOH HOH A . G 6 HOH 94 537 95 HOH HOH A . G 6 HOH 95 538 96 HOH HOH A . G 6 HOH 96 539 97 HOH HOH A . G 6 HOH 97 540 98 HOH HOH A . G 6 HOH 98 541 99 HOH HOH A . G 6 HOH 99 542 100 HOH HOH A . G 6 HOH 100 543 101 HOH HOH A . G 6 HOH 101 544 102 HOH HOH A . G 6 HOH 102 545 103 HOH HOH A . G 6 HOH 103 546 104 HOH HOH A . G 6 HOH 104 547 105 HOH HOH A . G 6 HOH 105 548 106 HOH HOH A . G 6 HOH 106 549 107 HOH HOH A . G 6 HOH 107 550 108 HOH HOH A . G 6 HOH 108 551 109 HOH HOH A . G 6 HOH 109 552 110 HOH HOH A . G 6 HOH 110 553 111 HOH HOH A . G 6 HOH 111 554 112 HOH HOH A . G 6 HOH 112 555 113 HOH HOH A . G 6 HOH 113 556 114 HOH HOH A . G 6 HOH 114 557 115 HOH HOH A . G 6 HOH 115 558 116 HOH HOH A . G 6 HOH 116 559 117 HOH HOH A . G 6 HOH 117 560 118 HOH HOH A . G 6 HOH 118 561 119 HOH HOH A . G 6 HOH 119 562 120 HOH HOH A . G 6 HOH 120 563 121 HOH HOH A . G 6 HOH 121 564 122 HOH HOH A . G 6 HOH 122 565 123 HOH HOH A . G 6 HOH 123 566 124 HOH HOH A . G 6 HOH 124 567 126 HOH HOH A . G 6 HOH 125 568 127 HOH HOH A . G 6 HOH 126 569 128 HOH HOH A . G 6 HOH 127 570 129 HOH HOH A . G 6 HOH 128 571 130 HOH HOH A . G 6 HOH 129 572 131 HOH HOH A . G 6 HOH 130 573 132 HOH HOH A . G 6 HOH 131 574 133 HOH HOH A . G 6 HOH 132 575 134 HOH HOH A . G 6 HOH 133 576 135 HOH HOH A . G 6 HOH 134 577 136 HOH HOH A . G 6 HOH 135 578 137 HOH HOH A . G 6 HOH 136 579 138 HOH HOH A . G 6 HOH 137 580 139 HOH HOH A . G 6 HOH 138 581 140 HOH HOH A . G 6 HOH 139 582 141 HOH HOH A . G 6 HOH 140 583 142 HOH HOH A . G 6 HOH 141 584 143 HOH HOH A . G 6 HOH 142 585 144 HOH HOH A . G 6 HOH 143 586 145 HOH HOH A . G 6 HOH 144 587 146 HOH HOH A . G 6 HOH 145 588 147 HOH HOH A . G 6 HOH 146 589 148 HOH HOH A . G 6 HOH 147 590 149 HOH HOH A . G 6 HOH 148 591 150 HOH HOH A . G 6 HOH 149 592 151 HOH HOH A . G 6 HOH 150 593 152 HOH HOH A . G 6 HOH 151 594 153 HOH HOH A . G 6 HOH 152 595 154 HOH HOH A . G 6 HOH 153 596 155 HOH HOH A . G 6 HOH 154 597 156 HOH HOH A . G 6 HOH 155 598 157 HOH HOH A . G 6 HOH 156 599 158 HOH HOH A . G 6 HOH 157 600 159 HOH HOH A . G 6 HOH 158 605 160 HOH HOH A . G 6 HOH 159 606 161 HOH HOH A . G 6 HOH 160 607 162 HOH HOH A . G 6 HOH 161 608 163 HOH HOH A . G 6 HOH 162 609 164 HOH HOH A . G 6 HOH 163 610 165 HOH HOH A . G 6 HOH 164 611 166 HOH HOH A . G 6 HOH 165 612 167 HOH HOH A . G 6 HOH 166 613 168 HOH HOH A . G 6 HOH 167 614 171 HOH HOH A . G 6 HOH 168 615 172 HOH HOH A . G 6 HOH 169 616 173 HOH HOH A . G 6 HOH 170 617 174 HOH HOH A . G 6 HOH 171 618 175 HOH HOH A . G 6 HOH 172 619 176 HOH HOH A . G 6 HOH 173 620 177 HOH HOH A . G 6 HOH 174 621 178 HOH HOH A . G 6 HOH 175 622 179 HOH HOH A . G 6 HOH 176 623 181 HOH HOH A . G 6 HOH 177 624 182 HOH HOH A . G 6 HOH 178 625 183 HOH HOH A . G 6 HOH 179 626 184 HOH HOH A . G 6 HOH 180 627 185 HOH HOH A . G 6 HOH 181 628 186 HOH HOH A . G 6 HOH 182 629 187 HOH HOH A . G 6 HOH 183 630 188 HOH HOH A . G 6 HOH 184 631 190 HOH HOH A . G 6 HOH 185 632 191 HOH HOH A . G 6 HOH 186 633 192 HOH HOH A . G 6 HOH 187 634 193 HOH HOH A . G 6 HOH 188 635 194 HOH HOH A . G 6 HOH 189 636 195 HOH HOH A . G 6 HOH 190 637 196 HOH HOH A . G 6 HOH 191 638 197 HOH HOH A . G 6 HOH 192 639 199 HOH HOH A . G 6 HOH 193 640 200 HOH HOH A . G 6 HOH 194 641 201 HOH HOH A . G 6 HOH 195 642 202 HOH HOH A . G 6 HOH 196 643 203 HOH HOH A . G 6 HOH 197 644 204 HOH HOH A . G 6 HOH 198 645 205 HOH HOH A . G 6 HOH 199 646 206 HOH HOH A . G 6 HOH 200 647 207 HOH HOH A . G 6 HOH 201 648 208 HOH HOH A . G 6 HOH 202 649 209 HOH HOH A . G 6 HOH 203 650 210 HOH HOH A . G 6 HOH 204 651 211 HOH HOH A . G 6 HOH 205 652 212 HOH HOH A . G 6 HOH 206 653 213 HOH HOH A . G 6 HOH 207 654 214 HOH HOH A . G 6 HOH 208 655 215 HOH HOH A . G 6 HOH 209 656 216 HOH HOH A . G 6 HOH 210 657 217 HOH HOH A . G 6 HOH 211 658 218 HOH HOH A . G 6 HOH 212 659 219 HOH HOH A . G 6 HOH 213 660 220 HOH HOH A . G 6 HOH 214 661 221 HOH HOH A . G 6 HOH 215 662 223 HOH HOH A . G 6 HOH 216 663 225 HOH HOH A . G 6 HOH 217 664 226 HOH HOH A . G 6 HOH 218 665 227 HOH HOH A . G 6 HOH 219 666 228 HOH HOH A . G 6 HOH 220 667 229 HOH HOH A . G 6 HOH 221 668 230 HOH HOH A . G 6 HOH 222 669 231 HOH HOH A . G 6 HOH 223 670 232 HOH HOH A . G 6 HOH 224 671 233 HOH HOH A . G 6 HOH 225 672 234 HOH HOH A . G 6 HOH 226 673 235 HOH HOH A . G 6 HOH 227 674 236 HOH HOH A . G 6 HOH 228 675 237 HOH HOH A . G 6 HOH 229 676 238 HOH HOH A . G 6 HOH 230 677 239 HOH HOH A . G 6 HOH 231 678 240 HOH HOH A . G 6 HOH 232 679 241 HOH HOH A . G 6 HOH 233 680 242 HOH HOH A . G 6 HOH 234 681 243 HOH HOH A . G 6 HOH 235 682 245 HOH HOH A . G 6 HOH 236 683 246 HOH HOH A . G 6 HOH 237 684 247 HOH HOH A . G 6 HOH 238 685 248 HOH HOH A . G 6 HOH 239 686 249 HOH HOH A . G 6 HOH 240 687 250 HOH HOH A . G 6 HOH 241 688 251 HOH HOH A . G 6 HOH 242 689 252 HOH HOH A . G 6 HOH 243 690 253 HOH HOH A . G 6 HOH 244 691 254 HOH HOH A . G 6 HOH 245 692 255 HOH HOH A . G 6 HOH 246 693 256 HOH HOH A . G 6 HOH 247 694 257 HOH HOH A . G 6 HOH 248 695 258 HOH HOH A . G 6 HOH 249 696 259 HOH HOH A . G 6 HOH 250 697 260 HOH HOH A . G 6 HOH 251 698 262 HOH HOH A . G 6 HOH 252 699 263 HOH HOH A . G 6 HOH 253 700 264 HOH HOH A . G 6 HOH 254 701 265 HOH HOH A . G 6 HOH 255 702 266 HOH HOH A . G 6 HOH 256 703 267 HOH HOH A . G 6 HOH 257 704 268 HOH HOH A . G 6 HOH 258 705 269 HOH HOH A . G 6 HOH 259 706 270 HOH HOH A . G 6 HOH 260 707 271 HOH HOH A . G 6 HOH 261 708 272 HOH HOH A . G 6 HOH 262 709 274 HOH HOH A . G 6 HOH 263 710 275 HOH HOH A . G 6 HOH 264 711 276 HOH HOH A . G 6 HOH 265 712 277 HOH HOH A . G 6 HOH 266 713 278 HOH HOH A . G 6 HOH 267 714 279 HOH HOH A . G 6 HOH 268 715 280 HOH HOH A . G 6 HOH 269 716 281 HOH HOH A . G 6 HOH 270 717 282 HOH HOH A . G 6 HOH 271 718 283 HOH HOH A . G 6 HOH 272 719 284 HOH HOH A . G 6 HOH 273 720 285 HOH HOH A . G 6 HOH 274 721 286 HOH HOH A . G 6 HOH 275 722 287 HOH HOH A . G 6 HOH 276 723 288 HOH HOH A . G 6 HOH 277 724 289 HOH HOH A . G 6 HOH 278 725 290 HOH HOH A . G 6 HOH 279 726 291 HOH HOH A . G 6 HOH 280 727 292 HOH HOH A . G 6 HOH 281 728 293 HOH HOH A . G 6 HOH 282 729 294 HOH HOH A . G 6 HOH 283 730 295 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 5 A ASN 5 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 95 A ASN 95 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 252 A ASN 252 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 16170 ? 1 MORE -42 ? 1 'SSA (A^2)' 51420 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 85.0840000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 85.0840000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-26 2 'Structure model' 1 1 2019-07-17 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-07-26 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Refinement description' 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Structure summary' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 2 'Structure model' struct_conn 3 3 'Structure model' atom_site 4 3 'Structure model' chem_comp 5 3 'Structure model' entity 6 3 'Structure model' pdbx_branch_scheme 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' struct_asym 16 3 'Structure model' struct_conn 17 3 'Structure model' struct_ref_seq_dif 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen 20 4 'Structure model' chem_comp 21 4 'Structure model' citation 22 4 'Structure model' citation_author 23 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_atom_site.B_iso_or_equiv' 5 3 'Structure model' '_atom_site.Cartn_x' 6 3 'Structure model' '_atom_site.Cartn_y' 7 3 'Structure model' '_atom_site.Cartn_z' 8 3 'Structure model' '_atom_site.auth_asym_id' 9 3 'Structure model' '_atom_site.auth_atom_id' 10 3 'Structure model' '_atom_site.auth_comp_id' 11 3 'Structure model' '_atom_site.auth_seq_id' 12 3 'Structure model' '_atom_site.label_asym_id' 13 3 'Structure model' '_atom_site.label_atom_id' 14 3 'Structure model' '_atom_site.label_comp_id' 15 3 'Structure model' '_atom_site.label_entity_id' 16 3 'Structure model' '_atom_site.occupancy' 17 3 'Structure model' '_atom_site.type_symbol' 18 3 'Structure model' '_chem_comp.name' 19 3 'Structure model' '_chem_comp.type' 20 3 'Structure model' '_pdbx_entity_nonpoly.entity_id' 21 3 'Structure model' '_pdbx_entity_nonpoly.name' 22 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 23 3 'Structure model' '_struct_conn.pdbx_dist_value' 24 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 3 'Structure model' '_struct_conn.pdbx_role' 26 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 3 'Structure model' '_struct_ref_seq_dif.details' 40 4 'Structure model' '_chem_comp.pdbx_synonyms' 41 4 'Structure model' '_citation.country' 42 4 'Structure model' '_citation.journal_abbrev' 43 4 'Structure model' '_citation.journal_id_CSD' 44 4 'Structure model' '_citation.journal_id_ISSN' 45 4 'Structure model' '_citation.journal_volume' 46 4 'Structure model' '_citation.page_first' 47 4 'Structure model' '_citation.page_last' 48 4 'Structure model' '_citation.pdbx_database_id_DOI' 49 4 'Structure model' '_citation.pdbx_database_id_PubMed' 50 4 'Structure model' '_citation.title' 51 4 'Structure model' '_citation.year' 52 4 'Structure model' '_database_2.pdbx_DOI' 53 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement . ? 1 CNS refinement . ? 2 HKL-2000 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CNS phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 48 ? ? -154.39 30.27 2 1 TYR A 64 ? ? 52.28 -118.64 3 1 SER A 88 ? ? 72.56 -48.44 4 1 ALA A 229 ? ? 66.94 -151.43 5 1 ILE A 282 ? ? -108.20 -62.79 6 1 ASN A 374 ? ? -167.36 73.90 7 1 ASN A 380 ? ? -148.47 13.70 8 1 ILE A 429 ? ? -150.83 45.48 9 1 GLU A 440 ? ? -66.63 86.30 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 22 ? OG ? A SER 22 OG 2 1 Y 1 A LYS 84 ? CG ? A LYS 84 CG 3 1 Y 1 A LYS 84 ? CD ? A LYS 84 CD 4 1 Y 1 A LYS 84 ? CE ? A LYS 84 CE 5 1 Y 1 A LYS 84 ? NZ ? A LYS 84 NZ 6 1 Y 1 A GLU 86 ? CG ? A GLU 86 CG 7 1 Y 1 A GLU 86 ? CD ? A GLU 86 CD 8 1 Y 1 A GLU 86 ? OE1 ? A GLU 86 OE1 9 1 Y 1 A GLU 86 ? OE2 ? A GLU 86 OE2 10 1 Y 1 A GLU 311 ? CG ? A GLU 311 CG 11 1 Y 1 A GLU 311 ? CD ? A GLU 311 CD 12 1 Y 1 A GLU 311 ? OE1 ? A GLU 311 OE1 13 1 Y 1 A GLU 311 ? OE2 ? A GLU 311 OE2 14 1 Y 1 A GLU 440 ? CG ? A GLU 440 CG 15 1 Y 1 A GLU 440 ? CD ? A GLU 440 CD 16 1 Y 1 A GLU 440 ? OE1 ? A GLU 440 OE1 17 1 Y 1 A GLU 440 ? OE2 ? A GLU 440 OE2 18 1 Y 1 A ASN 441 ? CG ? A ASN 441 CG 19 1 Y 1 A ASN 441 ? OD1 ? A ASN 441 OD1 20 1 Y 1 A ASN 441 ? ND2 ? A ASN 441 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 119 ? A GLY 119 2 1 Y 1 A THR 120 ? A THR 120 3 1 Y 1 A ALA 121 ? A ALA 121 4 1 Y 1 A SER 122 ? A SER 122 5 1 Y 1 A GLU 123 ? A GLU 123 6 1 Y 1 A ASN 124 ? A ASN 124 7 1 Y 1 A VAL 125 ? A VAL 125 8 1 Y 1 A TYR 126 ? A TYR 126 9 1 Y 1 A VAL 127 ? A VAL 127 10 1 Y 1 A ASN 128 ? A ASN 128 11 1 Y 1 A THR 129 ? A THR 129 12 1 Y 1 A ALA 130 ? A ALA 130 13 1 Y 1 A HIS 131 ? A HIS 131 14 1 Y 1 A LEU 132 ? A LEU 132 15 1 Y 1 A LYS 133 ? A LYS 133 16 1 Y 1 A ASN 134 ? A ASN 134 17 1 Y 1 A SER 135 ? A SER 135 18 1 Y 1 A GLN 136 ? A GLN 136 19 1 Y 1 A GLU 137 ? A GLU 137 20 1 Y 1 A LYS 138 ? A LYS 138 21 1 Y 1 A TYR 139 ? A TYR 139 22 1 Y 1 A SER 140 ? A SER 140 23 1 Y 1 A ASN 141 ? A ASN 141 24 1 Y 1 A ARG 142 ? A ARG 142 25 1 Y 1 A LEU 143 ? A LEU 143 26 1 Y 1 A TYR 144 ? A TYR 144 27 1 Y 1 A LYS 145 ? A LYS 145 28 1 Y 1 A TYR 146 ? A TYR 146 29 1 Y 1 A ASP 147 ? A ASP 147 30 1 Y 1 A HIS 148 ? A HIS 148 31 1 Y 1 A ASN 149 ? A ASN 149 32 1 Y 1 A PHE 150 ? A PHE 150 33 1 Y 1 A VAL 151 ? A VAL 151 34 1 Y 1 A LYS 152 ? A LYS 152 35 1 Y 1 A ALA 153 ? A ALA 153 36 1 Y 1 A ILE 154 ? A ILE 154 37 1 Y 1 A ASN 155 ? A ASN 155 38 1 Y 1 A ALA 156 ? A ALA 156 39 1 Y 1 A ILE 157 ? A ILE 157 40 1 Y 1 A GLN 158 ? A GLN 158 41 1 Y 1 A LYS 159 ? A LYS 159 42 1 Y 1 A SER 160 ? A SER 160 43 1 Y 1 A TRP 161 ? A TRP 161 44 1 Y 1 A THR 162 ? A THR 162 45 1 Y 1 A ALA 163 ? A ALA 163 46 1 Y 1 A THR 164 ? A THR 164 47 1 Y 1 A THR 165 ? A THR 165 48 1 Y 1 A TYR 166 ? A TYR 166 49 1 Y 1 A MET 167 ? A MET 167 50 1 Y 1 A GLU 168 ? A GLU 168 51 1 Y 1 A TYR 169 ? A TYR 169 52 1 Y 1 A GLU 170 ? A GLU 170 53 1 Y 1 A THR 171 ? A THR 171 54 1 Y 1 A LEU 172 ? A LEU 172 55 1 Y 1 A THR 173 ? A THR 173 56 1 Y 1 A LEU 174 ? A LEU 174 57 1 Y 1 A GLY 175 ? A GLY 175 58 1 Y 1 A ASP 176 ? A ASP 176 59 1 Y 1 A MET 177 ? A MET 177 60 1 Y 1 A ILE 178 ? A ILE 178 61 1 Y 1 A ARG 179 ? A ARG 179 62 1 Y 1 A ARG 180 ? A ARG 180 63 1 Y 1 A SER 181 ? A SER 181 64 1 Y 1 A GLY 182 ? A GLY 182 65 1 Y 1 A GLY 183 ? A GLY 183 66 1 Y 1 A HIS 184 ? A HIS 184 67 1 Y 1 A SER 185 ? A SER 185 68 1 Y 1 A ARG 186 ? A ARG 186 69 1 Y 1 A LYS 187 ? A LYS 187 70 1 Y 1 A ILE 188 ? A ILE 188 71 1 Y 1 A PRO 189 ? A PRO 189 72 1 Y 1 A ARG 190 ? A ARG 190 73 1 Y 1 A PRO 191 ? A PRO 191 74 1 Y 1 A LYS 192 ? A LYS 192 75 1 Y 1 A PRO 193 ? A PRO 193 76 1 Y 1 A ALA 194 ? A ALA 194 77 1 Y 1 A PRO 195 ? A PRO 195 78 1 Y 1 A LEU 196 ? A LEU 196 79 1 Y 1 A THR 197 ? A THR 197 80 1 Y 1 A ALA 198 ? A ALA 198 81 1 Y 1 A GLU 199 ? A GLU 199 82 1 Y 1 A ILE 200 ? A ILE 200 83 1 Y 1 A GLN 201 ? A GLN 201 84 1 Y 1 A GLN 202 ? A GLN 202 85 1 Y 1 A LYS 203 ? A LYS 203 86 1 Y 1 A ILE 204 ? A ILE 204 87 1 Y 1 A LEU 205 ? A LEU 205 88 1 Y 1 A GLY 368 ? A GLY 368 89 1 Y 1 A LEU 369 ? A LEU 369 90 1 Y 1 A ARG 370 ? A ARG 370 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 D NAG 601 n B 2 NAG 2 B NAG 2 D NAG 602 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '2,5-dibromo-N-{(3R,5S)-1-[(Z)-iminomethyl]-5-methylpyrrolidin-3-yl}benzenesulfonamide' LXV 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'CHLORIDE ION' CL 6 water HOH #