HEADER DNA BINDING PROTEIN 03-NOV-10 3PGZ TITLE CRYSTAL STRUCTURE OF A SINGLE STRAND BINDING PROTEIN (SSB) FROM TITLE 2 BARTONELLA HENSELAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SINGLE-STRANDED DNA-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA HENSELAE; SOURCE 3 ORGANISM_COMMON: ROCHALIMAEA HENSELAE; SOURCE 4 ORGANISM_TAXID: 38323; SOURCE 5 STRAIN: HOUSTON-1; SOURCE 6 GENE: BH10130, SSB4; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SSGCID, BARTONELLA HENSELAE, SINGLE-STRAND BINDING PROTEIN, SEATTLE KEYWDS 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, DNA BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID), AUTHOR 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 06-SEP-23 3PGZ 1 SEQADV REVDAT 2 24-JAN-18 3PGZ 1 AUTHOR JRNL REVDAT 1 22-DEC-10 3PGZ 0 JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, JRNL AUTH 2 J.ABENDROTH,T.E.EDWARDS,B.STAKER JRNL TITL CRYSTAL STRUCTURE OF A SINGLE STRAND BINDING PROTEIN (SSB) JRNL TITL 2 FROM BARTONELLA HENSELAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 18828 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 972 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1265 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1804 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 134 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.14000 REMARK 3 B22 (A**2) : -0.14000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : -0.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.621 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1871 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1296 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2531 ; 1.596 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3149 ; 0.859 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 232 ; 6.164 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;37.649 ;24.563 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 357 ;14.716 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;22.153 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 280 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2093 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 376 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1116 ; 0.838 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 464 ; 0.176 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1799 ; 1.639 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 755 ; 2.578 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 726 ; 4.387 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 36 REMARK 3 ORIGIN FOR THE GROUP (A): -9.2799 44.5711 12.9969 REMARK 3 T TENSOR REMARK 3 T11: 0.0640 T22: 0.1098 REMARK 3 T33: 0.0643 T12: -0.0277 REMARK 3 T13: 0.0229 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 3.0277 L22: 1.2994 REMARK 3 L33: 0.7544 L12: 0.5248 REMARK 3 L13: -0.4235 L23: 0.0977 REMARK 3 S TENSOR REMARK 3 S11: -0.0450 S12: 0.0793 S13: -0.1692 REMARK 3 S21: -0.1256 S22: 0.0558 S23: -0.1509 REMARK 3 S31: -0.0030 S32: 0.0356 S33: -0.0108 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 52 REMARK 3 ORIGIN FOR THE GROUP (A): -28.2977 30.9548 3.1081 REMARK 3 T TENSOR REMARK 3 T11: 0.2645 T22: 0.3066 REMARK 3 T33: 0.3527 T12: -0.1179 REMARK 3 T13: -0.1519 T23: -0.1152 REMARK 3 L TENSOR REMARK 3 L11: 26.4060 L22: 10.6479 REMARK 3 L33: 9.2594 L12: 13.7781 REMARK 3 L13: 5.6925 L23: 8.2406 REMARK 3 S TENSOR REMARK 3 S11: -0.2263 S12: 0.8256 S13: -0.1643 REMARK 3 S21: -0.3992 S22: -0.0569 S23: 0.1564 REMARK 3 S31: -0.4816 S32: -0.5196 S33: 0.2832 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 53 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): -10.2860 44.6730 10.3882 REMARK 3 T TENSOR REMARK 3 T11: 0.0650 T22: 0.1078 REMARK 3 T33: 0.0731 T12: -0.0210 REMARK 3 T13: 0.0182 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 2.3149 L22: 0.7509 REMARK 3 L33: 1.1501 L12: 0.4005 REMARK 3 L13: -0.5514 L23: -0.4754 REMARK 3 S TENSOR REMARK 3 S11: -0.0434 S12: 0.0991 S13: -0.0854 REMARK 3 S21: -0.0659 S22: 0.0503 S23: -0.0745 REMARK 3 S31: 0.0144 S32: 0.0136 S33: -0.0069 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 97 A 115 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6233 47.3807 14.5618 REMARK 3 T TENSOR REMARK 3 T11: 0.0470 T22: 0.1038 REMARK 3 T33: 0.0670 T12: -0.0062 REMARK 3 T13: -0.0059 T23: -0.0257 REMARK 3 L TENSOR REMARK 3 L11: 2.2228 L22: 1.3594 REMARK 3 L33: 2.0885 L12: 0.6192 REMARK 3 L13: -0.8321 L23: -0.6492 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: 0.0277 S13: -0.0217 REMARK 3 S21: 0.0726 S22: -0.0190 S23: -0.1538 REMARK 3 S31: -0.1903 S32: 0.1344 S33: -0.0192 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 35 REMARK 3 ORIGIN FOR THE GROUP (A): -33.0720 50.5876 4.8916 REMARK 3 T TENSOR REMARK 3 T11: 0.0584 T22: 0.2045 REMARK 3 T33: 0.0871 T12: -0.0509 REMARK 3 T13: -0.0323 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 2.3755 L22: 0.9670 REMARK 3 L33: 1.2228 L12: 0.6091 REMARK 3 L13: 0.4497 L23: 0.5004 REMARK 3 S TENSOR REMARK 3 S11: -0.2241 S12: 0.4093 S13: 0.2075 REMARK 3 S21: -0.1168 S22: 0.0859 S23: 0.1476 REMARK 3 S31: -0.1303 S32: -0.1334 S33: 0.1383 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 36 B 51 REMARK 3 ORIGIN FOR THE GROUP (A): -10.1526 63.5980 19.0348 REMARK 3 T TENSOR REMARK 3 T11: 0.1591 T22: 0.2356 REMARK 3 T33: 0.0863 T12: -0.1016 REMARK 3 T13: 0.0170 T23: -0.0379 REMARK 3 L TENSOR REMARK 3 L11: 19.9634 L22: 2.6732 REMARK 3 L33: 2.7439 L12: 6.3866 REMARK 3 L13: 7.3322 L23: 2.1724 REMARK 3 S TENSOR REMARK 3 S11: 0.0478 S12: -0.1038 S13: 0.1286 REMARK 3 S21: 0.0427 S22: -0.0627 S23: 0.1066 REMARK 3 S31: -0.0026 S32: -0.0059 S33: 0.0149 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 52 B 96 REMARK 3 ORIGIN FOR THE GROUP (A): -30.3952 50.6246 4.1446 REMARK 3 T TENSOR REMARK 3 T11: 0.0574 T22: 0.1790 REMARK 3 T33: 0.0674 T12: -0.0091 REMARK 3 T13: -0.0501 T23: 0.0531 REMARK 3 L TENSOR REMARK 3 L11: 2.6215 L22: 1.6824 REMARK 3 L33: 1.5225 L12: 0.3522 REMARK 3 L13: -0.3969 L23: 0.9842 REMARK 3 S TENSOR REMARK 3 S11: -0.1426 S12: 0.4485 S13: 0.1457 REMARK 3 S21: -0.1875 S22: 0.0035 S23: 0.2243 REMARK 3 S31: -0.1206 S32: -0.1051 S33: 0.1391 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 97 B 115 REMARK 3 ORIGIN FOR THE GROUP (A): -31.1453 46.6689 7.3503 REMARK 3 T TENSOR REMARK 3 T11: 0.0153 T22: 0.1375 REMARK 3 T33: 0.0940 T12: -0.0180 REMARK 3 T13: -0.0314 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 3.2332 L22: 1.5979 REMARK 3 L33: 2.1997 L12: -0.3880 REMARK 3 L13: -0.7942 L23: 1.2290 REMARK 3 S TENSOR REMARK 3 S11: -0.1029 S12: 0.4361 S13: 0.0405 REMARK 3 S21: -0.1054 S22: -0.0549 S23: 0.2526 REMARK 3 S31: -0.0245 S32: -0.2505 S33: 0.1578 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 4 REMARK 4 3PGZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000062361. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18898 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.6700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.52700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3LGJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 % PEG 3350, 200 MM NACL, 100 MM REMARK 280 TRIS HCL, PROTEIN AT 4.5 MG/ML, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K, PH 9.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.34000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.17000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 21.17000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.34000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ARG A 43 REMARK 465 ASN A 44 REMARK 465 THR A 45 REMARK 465 ASN A 46 REMARK 465 GLU A 47 REMARK 465 GLY A 116 REMARK 465 ARG A 117 REMARK 465 ALA A 118 REMARK 465 ALA A 119 REMARK 465 ALA A 120 REMARK 465 GLY A 121 REMARK 465 GLY A 122 REMARK 465 GLU A 123 REMARK 465 GLN A 124 REMARK 465 MET A 125 REMARK 465 GLN A 126 REMARK 465 GLY A 127 REMARK 465 ALA A 128 REMARK 465 ASN A 129 REMARK 465 GLN A 130 REMARK 465 SER A 131 REMARK 465 SER A 132 REMARK 465 GLY A 133 REMARK 465 ALA A 134 REMARK 465 TYR A 135 REMARK 465 SER A 136 REMARK 465 SER A 137 REMARK 465 VAL A 138 REMARK 465 GLY A 139 REMARK 465 PHE A 140 REMARK 465 GLY A 141 REMARK 465 ASP A 142 REMARK 465 ASN A 143 REMARK 465 SER A 144 REMARK 465 ALA A 145 REMARK 465 ASN A 146 REMARK 465 GLN A 147 REMARK 465 ARG A 148 REMARK 465 ASP A 149 REMARK 465 VAL A 150 REMARK 465 PHE A 151 REMARK 465 GLY A 152 REMARK 465 SER A 153 REMARK 465 ASN A 154 REMARK 465 ASN A 155 REMARK 465 SER A 156 REMARK 465 GLN A 157 REMARK 465 LEU A 158 REMARK 465 GLY A 159 REMARK 465 GLU A 160 REMARK 465 SER A 161 REMARK 465 PHE A 162 REMARK 465 SER A 163 REMARK 465 HIS A 164 REMARK 465 LYS A 165 REMARK 465 LEU A 166 REMARK 465 ASP A 167 REMARK 465 ASP A 168 REMARK 465 ASP A 169 REMARK 465 VAL A 170 REMARK 465 PRO A 171 REMARK 465 PHE A 172 REMARK 465 MET B -20 REMARK 465 ALA B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 THR B -10 REMARK 465 LEU B -9 REMARK 465 GLU B -8 REMARK 465 ALA B -7 REMARK 465 GLN B -6 REMARK 465 THR B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLY B 116 REMARK 465 ARG B 117 REMARK 465 ALA B 118 REMARK 465 ALA B 119 REMARK 465 ALA B 120 REMARK 465 GLY B 121 REMARK 465 GLY B 122 REMARK 465 GLU B 123 REMARK 465 GLN B 124 REMARK 465 MET B 125 REMARK 465 GLN B 126 REMARK 465 GLY B 127 REMARK 465 ALA B 128 REMARK 465 ASN B 129 REMARK 465 GLN B 130 REMARK 465 SER B 131 REMARK 465 SER B 132 REMARK 465 GLY B 133 REMARK 465 ALA B 134 REMARK 465 TYR B 135 REMARK 465 SER B 136 REMARK 465 SER B 137 REMARK 465 VAL B 138 REMARK 465 GLY B 139 REMARK 465 PHE B 140 REMARK 465 GLY B 141 REMARK 465 ASP B 142 REMARK 465 ASN B 143 REMARK 465 SER B 144 REMARK 465 ALA B 145 REMARK 465 ASN B 146 REMARK 465 GLN B 147 REMARK 465 ARG B 148 REMARK 465 ASP B 149 REMARK 465 VAL B 150 REMARK 465 PHE B 151 REMARK 465 GLY B 152 REMARK 465 SER B 153 REMARK 465 ASN B 154 REMARK 465 ASN B 155 REMARK 465 SER B 156 REMARK 465 GLN B 157 REMARK 465 LEU B 158 REMARK 465 GLY B 159 REMARK 465 GLU B 160 REMARK 465 SER B 161 REMARK 465 PHE B 162 REMARK 465 SER B 163 REMARK 465 HIS B 164 REMARK 465 LYS B 165 REMARK 465 LEU B 166 REMARK 465 ASP B 167 REMARK 465 ASP B 168 REMARK 465 ASP B 169 REMARK 465 VAL B 170 REMARK 465 PRO B 171 REMARK 465 PHE B 172 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 41 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 48 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 LYS A 66 CG CD CE NZ REMARK 470 ASN B 24 CG OD1 ND2 REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 LYS B 73 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 85 NE2 GLN A 105 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 107 9.56 58.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BAHEA.01619.A RELATED DB: TARGETDB DBREF 3PGZ A 1 172 UNP Q6G302 Q6G302_BARHE 1 172 DBREF 3PGZ B 1 172 UNP Q6G302 Q6G302_BARHE 1 172 SEQADV 3PGZ MET A -20 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ ALA A -19 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS A -18 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS A -17 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS A -16 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS A -15 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS A -14 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS A -13 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ MET A -12 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLY A -11 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ THR A -10 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ LEU A -9 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLU A -8 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ ALA A -7 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLN A -6 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ THR A -5 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLN A -4 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLY A -3 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ PRO A -2 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLY A -1 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ SER A 0 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ MET B -20 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ ALA B -19 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS B -18 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS B -17 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS B -16 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS B -15 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS B -14 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ HIS B -13 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ MET B -12 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLY B -11 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ THR B -10 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ LEU B -9 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLU B -8 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ ALA B -7 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLN B -6 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ THR B -5 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLN B -4 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLY B -3 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ PRO B -2 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ GLY B -1 UNP Q6G302 EXPRESSION TAG SEQADV 3PGZ SER B 0 UNP Q6G302 EXPRESSION TAG SEQRES 1 A 193 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 193 ALA GLN THR GLN GLY PRO GLY SER MET ALA GLY SER LEU SEQRES 3 A 193 ASN LYS VAL ILE LEU ILE GLY ASN LEU GLY ALA ASP PRO SEQRES 4 A 193 GLU ILE ARG ARG LEU ASN SER GLY ASP GLN VAL ALA ASN SEQRES 5 A 193 LEU ARG ILE ALA THR SER GLU SER TRP ARG ASP ARG ASN SEQRES 6 A 193 THR ASN GLU ARG LYS GLU ARG THR GLU TRP HIS ASN ILE SEQRES 7 A 193 VAL ILE PHE ASN GLU ASN LEU VAL LYS VAL VAL GLU GLN SEQRES 8 A 193 TYR LEU LYS LYS GLY SER LYS ILE TYR ILE GLU GLY GLN SEQRES 9 A 193 LEU GLN THR ARG LYS TRP GLN ASP GLN ASN GLY ASN ASP SEQRES 10 A 193 ARG TYR THR THR GLU ILE VAL LEU GLN LYS TYR ARG GLY SEQRES 11 A 193 GLU LEU GLN MET LEU ASP GLY ARG ALA ALA ALA GLY GLY SEQRES 12 A 193 GLU GLN MET GLN GLY ALA ASN GLN SER SER GLY ALA TYR SEQRES 13 A 193 SER SER VAL GLY PHE GLY ASP ASN SER ALA ASN GLN ARG SEQRES 14 A 193 ASP VAL PHE GLY SER ASN ASN SER GLN LEU GLY GLU SER SEQRES 15 A 193 PHE SER HIS LYS LEU ASP ASP ASP VAL PRO PHE SEQRES 1 B 193 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 B 193 ALA GLN THR GLN GLY PRO GLY SER MET ALA GLY SER LEU SEQRES 3 B 193 ASN LYS VAL ILE LEU ILE GLY ASN LEU GLY ALA ASP PRO SEQRES 4 B 193 GLU ILE ARG ARG LEU ASN SER GLY ASP GLN VAL ALA ASN SEQRES 5 B 193 LEU ARG ILE ALA THR SER GLU SER TRP ARG ASP ARG ASN SEQRES 6 B 193 THR ASN GLU ARG LYS GLU ARG THR GLU TRP HIS ASN ILE SEQRES 7 B 193 VAL ILE PHE ASN GLU ASN LEU VAL LYS VAL VAL GLU GLN SEQRES 8 B 193 TYR LEU LYS LYS GLY SER LYS ILE TYR ILE GLU GLY GLN SEQRES 9 B 193 LEU GLN THR ARG LYS TRP GLN ASP GLN ASN GLY ASN ASP SEQRES 10 B 193 ARG TYR THR THR GLU ILE VAL LEU GLN LYS TYR ARG GLY SEQRES 11 B 193 GLU LEU GLN MET LEU ASP GLY ARG ALA ALA ALA GLY GLY SEQRES 12 B 193 GLU GLN MET GLN GLY ALA ASN GLN SER SER GLY ALA TYR SEQRES 13 B 193 SER SER VAL GLY PHE GLY ASP ASN SER ALA ASN GLN ARG SEQRES 14 B 193 ASP VAL PHE GLY SER ASN ASN SER GLN LEU GLY GLU SER SEQRES 15 B 193 PHE SER HIS LYS LEU ASP ASP ASP VAL PRO PHE HET UNX B 173 1 HET UNX B 174 1 HET UNX B 175 1 HET UNX B 176 1 HET UNX B 177 1 HET UNX B 178 1 HETNAM UNX UNKNOWN ATOM OR ION FORMUL 3 UNX 6(X) FORMUL 9 HOH *134(H2 O) HELIX 1 1 ASN A 61 LEU A 72 1 12 HELIX 2 2 ASN B 61 LEU B 72 1 12 SHEET 1 A 7 GLU A 19 ARG A 22 0 SHEET 2 A 7 GLN A 28 TRP A 40 -1 O VAL A 29 N ARG A 21 SHEET 3 A 7 LEU A 5 LEU A 14 -1 N ASN A 13 O ALA A 35 SHEET 4 A 7 LEU B 5 LEU B 14 -1 O LYS B 7 N ILE A 9 SHEET 5 A 7 GLN B 28 ARG B 41 -1 O ALA B 35 N ASN B 13 SHEET 6 A 7 ARG B 48 ILE B 59 -1 O LYS B 49 N TRP B 40 SHEET 7 A 7 ASP B 96 LEU B 104 1 O ILE B 102 N VAL B 58 SHEET 1 B 5 GLN A 28 TRP A 40 0 SHEET 2 B 5 LYS A 49 ILE A 59 -1 O LYS A 49 N TRP A 40 SHEET 3 B 5 ASP A 96 LEU A 104 1 O ILE A 102 N VAL A 58 SHEET 4 B 5 LYS A 77 GLN A 90 -1 N GLN A 83 O VAL A 103 SHEET 5 B 5 GLU A 110 MET A 113 -1 O GLU A 110 N GLU A 81 SHEET 1 C 6 GLU B 110 MET B 113 0 SHEET 2 C 6 LYS B 77 GLN B 90 -1 N TYR B 79 O GLN B 112 SHEET 3 C 6 ASP B 96 LEU B 104 -1 O VAL B 103 N GLN B 83 SHEET 4 C 6 ARG B 48 ILE B 59 1 N VAL B 58 O ILE B 102 SHEET 5 C 6 GLN B 28 ARG B 41 -1 N TRP B 40 O LYS B 49 SHEET 6 C 6 GLU B 19 ARG B 22 -1 N GLU B 19 O ASN B 31 CRYST1 93.760 93.760 63.510 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010666 0.006158 0.000000 0.00000 SCALE2 0.000000 0.012315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015746 0.00000