data_3PIS # _entry.id 3PIS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3PIS RCSB RCSB062422 WWPDB D_1000062422 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PIS _pdbx_database_status.recvd_initial_deposition_date 2010-11-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Giri, P.K.' 1 'Tang, X.H.' 2 'Sivaraman, J.' 3 # _citation.id primary _citation.title 'Modifying the Substrate Specificity of Carcinoscorpius rotundicauda Serine Protease Inhibitor Domain 1 to Target Thrombin' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Giri, P.K.' 1 primary 'Tang, X.H.' 2 primary 'Thangamani, S.' 3 primary 'Shenoy, R.T.' 4 primary 'Ding, J.L.' 5 primary 'Swaminathan, K.' 6 primary 'Sivaraman, J.' 7 # _cell.entry_id 3PIS _cell.length_a 25.480 _cell.length_b 37.214 _cell.length_c 36.500 _cell.angle_alpha 90.00 _cell.angle_beta 99.80 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PIS _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Kazal-type serine protease inhibitor SPI-1' 4605.021 2 ? ? 'UNP RESIDUES 26-65' ? 2 water nat water 18.015 55 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSCPHTYKPVCGANGEVYDNECFLNKAGIEPAESWETCRGHE _entity_poly.pdbx_seq_one_letter_code_can GSCPHTYKPVCGANGEVYDNECFLNKAGIEPAESWETCRGHE _entity_poly.pdbx_strand_id D,A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 CYS n 1 4 PRO n 1 5 HIS n 1 6 THR n 1 7 TYR n 1 8 LYS n 1 9 PRO n 1 10 VAL n 1 11 CYS n 1 12 GLY n 1 13 ALA n 1 14 ASN n 1 15 GLY n 1 16 GLU n 1 17 VAL n 1 18 TYR n 1 19 ASP n 1 20 ASN n 1 21 GLU n 1 22 CYS n 1 23 PHE n 1 24 LEU n 1 25 ASN n 1 26 LYS n 1 27 ALA n 1 28 GLY n 1 29 ILE n 1 30 GLU n 1 31 PRO n 1 32 ALA n 1 33 GLU n 1 34 SER n 1 35 TRP n 1 36 GLU n 1 37 THR n 1 38 CYS n 1 39 ARG n 1 40 GLY n 1 41 HIS n 1 42 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'mangrove horseshoe crab' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SPI-1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Carcinoscorpius rotundicauda' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6848 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A1X1V8_CARRO _struct_ref.pdbx_db_accession A1X1V8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code CPHTYKPVCGANGEVYDNECFLNKAGIEPAESWETCRGHE _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PIS D 3 ? 42 ? A1X1V8 26 ? 65 ? 2 41 2 1 3PIS A 3 ? 42 ? A1X1V8 26 ? 65 ? 2 41 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3PIS GLY D 1 ? UNP A1X1V8 ? ? 'EXPRESSION TAG' 0 1 1 3PIS SER D 2 ? UNP A1X1V8 ? ? 'EXPRESSION TAG' 1 2 2 3PIS GLY A 1 ? UNP A1X1V8 ? ? 'EXPRESSION TAG' 0 3 2 3PIS SER A 2 ? UNP A1X1V8 ? ? 'EXPRESSION TAG' 1 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3PIS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.85 _exptl_crystal.density_percent_sol 33.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.4M mono ammonium dihydrogen sulphate, 0.1M Tris-HCl pH8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'Bruker Platinum 135' _diffrn_detector.pdbx_collection_date 2009-11-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3PIS _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.0 _reflns.number_obs 4535 _reflns.number_all 4535 _reflns.percent_possible_obs 97.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 80.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 381 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3PIS _refine.ls_number_reflns_obs 4488 _refine.ls_number_reflns_all 4648 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 96.55 _refine.ls_R_factor_obs 0.2227 _refine.ls_R_factor_all 0.2227 _refine.ls_R_factor_R_work 0.2147 _refine.ls_R_factor_R_free 0.2556 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 273 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 574 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 629 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.66 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 3PIS _struct.title 'Crystal Structure of Carcinoscorpius rotundicauda Serine Protease Inhibitor Domain 1' _struct.pdbx_descriptor 'Kazal-type serine protease inhibitor SPI-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PIS _struct_keywords.pdbx_keywords 'HYDROLASE INHIBITOR' _struct_keywords.text 'typical non-classical Kazal type inhibitor Fold, serine protease inhibitors (uncharacterized), HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 20 ? ALA A 27 ? ASN D 19 ALA D 26 1 ? 8 HELX_P HELX_P2 2 SER A 34 ? ARG A 39 ? SER D 33 ARG D 38 5 ? 6 HELX_P HELX_P3 3 ASN B 20 ? ALA B 27 ? ASN A 19 ALA A 26 1 ? 8 HELX_P HELX_P4 4 SER B 34 ? ARG B 39 ? SER A 33 ARG A 38 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 22 SG ? ? D CYS 2 D CYS 21 1_555 ? ? ? ? ? ? ? 2.009 ? disulf2 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 38 SG ? ? D CYS 10 D CYS 37 1_555 ? ? ? ? ? ? ? 2.033 ? disulf3 disulf ? ? B CYS 3 SG ? ? ? 1_555 B CYS 22 SG ? ? A CYS 2 A CYS 21 1_555 ? ? ? ? ? ? ? 2.021 ? disulf4 disulf ? ? B CYS 11 SG ? ? ? 1_555 B CYS 38 SG ? ? A CYS 10 A CYS 37 1_555 ? ? ? ? ? ? ? 2.039 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 10 ? CYS A 11 ? VAL D 9 CYS D 10 A 2 VAL A 17 ? TYR A 18 ? VAL D 16 TYR D 17 B 1 VAL B 10 ? CYS B 11 ? VAL A 9 CYS A 10 B 2 VAL B 17 ? TYR B 18 ? VAL A 16 TYR A 17 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 10 ? N VAL D 9 O TYR A 18 ? O TYR D 17 B 1 2 N VAL B 10 ? N VAL A 9 O TYR B 18 ? O TYR A 17 # _database_PDB_matrix.entry_id 3PIS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3PIS _atom_sites.fract_transf_matrix[1][1] 0.039246 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006779 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026872 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027803 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? D . n A 1 2 SER 2 1 ? ? ? D . n A 1 3 CYS 3 2 2 CYS CYS D . n A 1 4 PRO 4 3 3 PRO PRO D . n A 1 5 HIS 5 4 4 HIS HIS D . n A 1 6 THR 6 5 5 THR THR D . n A 1 7 TYR 7 6 6 TYR TYR D . n A 1 8 LYS 8 7 7 LYS ALA D . n A 1 9 PRO 9 8 8 PRO PRO D . n A 1 10 VAL 10 9 9 VAL VAL D . n A 1 11 CYS 11 10 10 CYS CYS D . n A 1 12 GLY 12 11 11 GLY GLY D . n A 1 13 ALA 13 12 12 ALA ALA D . n A 1 14 ASN 14 13 13 ASN ASN D . n A 1 15 GLY 15 14 14 GLY GLY D . n A 1 16 GLU 16 15 15 GLU GLU D . n A 1 17 VAL 17 16 16 VAL VAL D . n A 1 18 TYR 18 17 17 TYR TYR D . n A 1 19 ASP 19 18 18 ASP ASP D . n A 1 20 ASN 20 19 19 ASN ASN D . n A 1 21 GLU 21 20 20 GLU GLU D . n A 1 22 CYS 22 21 21 CYS CYS D . n A 1 23 PHE 23 22 22 PHE PHE D . n A 1 24 LEU 24 23 23 LEU LEU D . n A 1 25 ASN 25 24 24 ASN ASN D . n A 1 26 LYS 26 25 25 LYS LYS D . n A 1 27 ALA 27 26 26 ALA ALA D . n A 1 28 GLY 28 27 27 GLY GLY D . n A 1 29 ILE 29 28 28 ILE ILE D . n A 1 30 GLU 30 29 29 GLU GLU D . n A 1 31 PRO 31 30 30 PRO PRO D . n A 1 32 ALA 32 31 31 ALA ALA D . n A 1 33 GLU 33 32 32 GLU GLU D . n A 1 34 SER 34 33 33 SER SER D . n A 1 35 TRP 35 34 34 TRP TRP D . n A 1 36 GLU 36 35 35 GLU ALA D . n A 1 37 THR 37 36 36 THR THR D . n A 1 38 CYS 38 37 37 CYS CYS D . n A 1 39 ARG 39 38 38 ARG ALA D . n A 1 40 GLY 40 39 39 GLY GLY D . n A 1 41 HIS 41 40 40 HIS HIS D . n A 1 42 GLU 42 41 ? ? ? D . n B 1 1 GLY 1 0 ? ? ? A . n B 1 2 SER 2 1 1 SER SER A . n B 1 3 CYS 3 2 2 CYS CYS A . n B 1 4 PRO 4 3 3 PRO PRO A . n B 1 5 HIS 5 4 4 HIS HIS A . n B 1 6 THR 6 5 5 THR THR A . n B 1 7 TYR 7 6 6 TYR TYR A . n B 1 8 LYS 8 7 7 LYS ALA A . n B 1 9 PRO 9 8 8 PRO PRO A . n B 1 10 VAL 10 9 9 VAL VAL A . n B 1 11 CYS 11 10 10 CYS CYS A . n B 1 12 GLY 12 11 11 GLY GLY A . n B 1 13 ALA 13 12 12 ALA ALA A . n B 1 14 ASN 14 13 13 ASN ASN A . n B 1 15 GLY 15 14 14 GLY GLY A . n B 1 16 GLU 16 15 15 GLU GLU A . n B 1 17 VAL 17 16 16 VAL VAL A . n B 1 18 TYR 18 17 17 TYR TYR A . n B 1 19 ASP 19 18 18 ASP ASP A . n B 1 20 ASN 20 19 19 ASN ASN A . n B 1 21 GLU 21 20 20 GLU GLU A . n B 1 22 CYS 22 21 21 CYS CYS A . n B 1 23 PHE 23 22 22 PHE PHE A . n B 1 24 LEU 24 23 23 LEU LEU A . n B 1 25 ASN 25 24 24 ASN ASN A . n B 1 26 LYS 26 25 25 LYS LYS A . n B 1 27 ALA 27 26 26 ALA ALA A . n B 1 28 GLY 28 27 27 GLY GLY A . n B 1 29 ILE 29 28 28 ILE ILE A . n B 1 30 GLU 30 29 29 GLU GLU A . n B 1 31 PRO 31 30 30 PRO PRO A . n B 1 32 ALA 32 31 31 ALA ALA A . n B 1 33 GLU 33 32 32 GLU GLU A . n B 1 34 SER 34 33 33 SER SER A . n B 1 35 TRP 35 34 34 TRP TRP A . n B 1 36 GLU 36 35 35 GLU GLU A . n B 1 37 THR 37 36 36 THR THR A . n B 1 38 CYS 38 37 37 CYS CYS A . n B 1 39 ARG 39 38 38 ARG ALA A . n B 1 40 GLY 40 39 39 GLY GLY A . n B 1 41 HIS 41 40 ? ? ? A . n B 1 42 GLU 42 41 ? ? ? A . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-08 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 CNS refinement . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 23 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 23 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 23 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 131.17 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 15.87 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS D 4 ? ? -84.86 34.60 2 1 ARG A 38 ? ? 157.09 160.55 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D LYS 7 ? CG ? A LYS 8 CG 2 1 Y 1 D LYS 7 ? CD ? A LYS 8 CD 3 1 Y 1 D LYS 7 ? CE ? A LYS 8 CE 4 1 Y 1 D LYS 7 ? NZ ? A LYS 8 NZ 5 1 Y 1 D GLU 35 ? CG ? A GLU 36 CG 6 1 Y 1 D GLU 35 ? CD ? A GLU 36 CD 7 1 Y 1 D GLU 35 ? OE1 ? A GLU 36 OE1 8 1 Y 1 D GLU 35 ? OE2 ? A GLU 36 OE2 9 1 Y 1 D ARG 38 ? CG ? A ARG 39 CG 10 1 Y 1 D ARG 38 ? CD ? A ARG 39 CD 11 1 Y 1 D ARG 38 ? NE ? A ARG 39 NE 12 1 Y 1 D ARG 38 ? CZ ? A ARG 39 CZ 13 1 Y 1 D ARG 38 ? NH1 ? A ARG 39 NH1 14 1 Y 1 D ARG 38 ? NH2 ? A ARG 39 NH2 15 1 Y 1 A LYS 7 ? CG ? B LYS 8 CG 16 1 Y 1 A LYS 7 ? CD ? B LYS 8 CD 17 1 Y 1 A LYS 7 ? CE ? B LYS 8 CE 18 1 Y 1 A LYS 7 ? NZ ? B LYS 8 NZ 19 1 Y 1 A ARG 38 ? CG ? B ARG 39 CG 20 1 Y 1 A ARG 38 ? CD ? B ARG 39 CD 21 1 Y 1 A ARG 38 ? NE ? B ARG 39 NE 22 1 Y 1 A ARG 38 ? CZ ? B ARG 39 CZ 23 1 Y 1 A ARG 38 ? NH1 ? B ARG 39 NH1 24 1 Y 1 A ARG 38 ? NH2 ? B ARG 39 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D GLY 0 ? A GLY 1 2 1 Y 1 D SER 1 ? A SER 2 3 1 Y 1 D GLU 41 ? A GLU 42 4 1 Y 1 A GLY 0 ? B GLY 1 5 1 Y 1 A HIS 40 ? B HIS 41 6 1 Y 1 A GLU 41 ? B GLU 42 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 43 43 HOH TIP D . C 2 HOH 2 44 9 HOH TIP D . C 2 HOH 3 45 10 HOH TIP D . C 2 HOH 4 46 12 HOH TIP D . C 2 HOH 5 47 13 HOH TIP D . C 2 HOH 6 48 21 HOH TIP D . C 2 HOH 7 49 22 HOH TIP D . C 2 HOH 8 50 23 HOH TIP D . C 2 HOH 9 51 25 HOH TIP D . C 2 HOH 10 52 26 HOH TIP D . C 2 HOH 11 53 27 HOH TIP D . C 2 HOH 12 54 28 HOH TIP D . C 2 HOH 13 55 30 HOH TIP D . C 2 HOH 14 57 57 HOH TIP D . C 2 HOH 15 58 32 HOH TIP D . C 2 HOH 16 59 33 HOH TIP D . C 2 HOH 17 60 34 HOH TIP D . C 2 HOH 18 61 35 HOH TIP D . C 2 HOH 19 62 62 HOH TIP D . C 2 HOH 20 66 66 HOH TIP D . C 2 HOH 21 67 67 HOH TIP D . C 2 HOH 22 69 69 HOH TIP D . C 2 HOH 23 71 71 HOH TIP D . D 2 HOH 1 42 42 HOH TIP A . D 2 HOH 2 43 4 HOH TIP A . D 2 HOH 3 44 44 HOH TIP A . D 2 HOH 4 45 5 HOH TIP A . D 2 HOH 5 46 6 HOH TIP A . D 2 HOH 6 47 7 HOH TIP A . D 2 HOH 7 48 8 HOH TIP A . D 2 HOH 8 49 11 HOH TIP A . D 2 HOH 9 50 14 HOH TIP A . D 2 HOH 10 51 16 HOH TIP A . D 2 HOH 11 52 17 HOH TIP A . D 2 HOH 12 53 18 HOH TIP A . D 2 HOH 13 54 19 HOH TIP A . D 2 HOH 14 55 24 HOH TIP A . D 2 HOH 15 56 56 HOH TIP A . D 2 HOH 16 57 31 HOH TIP A . D 2 HOH 17 58 58 HOH TIP A . D 2 HOH 18 59 59 HOH TIP A . D 2 HOH 19 60 60 HOH TIP A . D 2 HOH 20 61 61 HOH TIP A . D 2 HOH 21 62 36 HOH TIP A . D 2 HOH 22 63 63 HOH TIP A . D 2 HOH 23 64 64 HOH TIP A . D 2 HOH 24 65 65 HOH TIP A . D 2 HOH 25 66 37 HOH TIP A . D 2 HOH 26 67 38 HOH TIP A . D 2 HOH 27 68 68 HOH TIP A . D 2 HOH 28 69 39 HOH TIP A . D 2 HOH 29 70 70 HOH TIP A . D 2 HOH 30 71 40 HOH TIP A . D 2 HOH 31 72 41 HOH TIP A . D 2 HOH 32 73 29 HOH TIP A . #