data_3PJI # _entry.id 3PJI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.290 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3PJI RCSB RCSB062448 WWPDB D_1000062448 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3L47 'Crystal structure of AgamOBP22a golden derivatives.' unspecified PDB 3L4A 'Crystal structure of AgamOBP22a natively binding with Glycerol in the close status.' unspecified PDB 3L4L 'Crystal structure of AgamOBP22a complex with benzaldehyde.' unspecified PDB 3QME 'Crystal structure of AgamOBP22a complex with cyclohexanone.' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PJI _pdbx_database_status.recvd_initial_deposition_date 2010-11-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, S.' 1 'Ren, H.' 2 # _citation.id primary _citation.title 'Crystal Structures of Anopheles gambiae Odorant-binding Protein AgamOBP22a and Complexes with Bound Odorants' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ren, H.' 1 primary 'Yang, G.' 2 primary 'Winberg, G.' 3 primary 'Turin, L.' 4 primary 'Zhang, S.' 5 # _cell.entry_id 3PJI _cell.length_a 72.263 _cell.length_b 37.702 _cell.length_c 43.639 _cell.angle_alpha 90.00 _cell.angle_beta 99.46 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PJI _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Odorant binding protein (AGAP010409-PA)' 16043.329 1 ? ? 'AgamOBP22a, UNP residues 22-144' ? 2 non-polymer syn 'AMMONIUM ION' 18.038 3 ? ? ? ? 3 water nat water 18.015 118 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Odorant-binding protein OBPjj83b' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADNNESVIESCSNAVQGAANDELKVHYRANEFPDDPVTHCFVRCIGLELNLYDDKYGVDLQANWENLGNSDDADEEFVAK HRACLEAKNLETIEDLCERAYSAFQCLREDYEMYQNNNNATSELVPRGSSGELWSHPQFEK ; _entity_poly.pdbx_seq_one_letter_code_can ;ADNNESVIESCSNAVQGAANDELKVHYRANEFPDDPVTHCFVRCIGLELNLYDDKYGVDLQANWENLGNSDDADEEFVAK HRACLEAKNLETIEDLCERAYSAFQCLREDYEMYQNNNNATSELVPRGSSGELWSHPQFEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 ASN n 1 4 ASN n 1 5 GLU n 1 6 SER n 1 7 VAL n 1 8 ILE n 1 9 GLU n 1 10 SER n 1 11 CYS n 1 12 SER n 1 13 ASN n 1 14 ALA n 1 15 VAL n 1 16 GLN n 1 17 GLY n 1 18 ALA n 1 19 ALA n 1 20 ASN n 1 21 ASP n 1 22 GLU n 1 23 LEU n 1 24 LYS n 1 25 VAL n 1 26 HIS n 1 27 TYR n 1 28 ARG n 1 29 ALA n 1 30 ASN n 1 31 GLU n 1 32 PHE n 1 33 PRO n 1 34 ASP n 1 35 ASP n 1 36 PRO n 1 37 VAL n 1 38 THR n 1 39 HIS n 1 40 CYS n 1 41 PHE n 1 42 VAL n 1 43 ARG n 1 44 CYS n 1 45 ILE n 1 46 GLY n 1 47 LEU n 1 48 GLU n 1 49 LEU n 1 50 ASN n 1 51 LEU n 1 52 TYR n 1 53 ASP n 1 54 ASP n 1 55 LYS n 1 56 TYR n 1 57 GLY n 1 58 VAL n 1 59 ASP n 1 60 LEU n 1 61 GLN n 1 62 ALA n 1 63 ASN n 1 64 TRP n 1 65 GLU n 1 66 ASN n 1 67 LEU n 1 68 GLY n 1 69 ASN n 1 70 SER n 1 71 ASP n 1 72 ASP n 1 73 ALA n 1 74 ASP n 1 75 GLU n 1 76 GLU n 1 77 PHE n 1 78 VAL n 1 79 ALA n 1 80 LYS n 1 81 HIS n 1 82 ARG n 1 83 ALA n 1 84 CYS n 1 85 LEU n 1 86 GLU n 1 87 ALA n 1 88 LYS n 1 89 ASN n 1 90 LEU n 1 91 GLU n 1 92 THR n 1 93 ILE n 1 94 GLU n 1 95 ASP n 1 96 LEU n 1 97 CYS n 1 98 GLU n 1 99 ARG n 1 100 ALA n 1 101 TYR n 1 102 SER n 1 103 ALA n 1 104 PHE n 1 105 GLN n 1 106 CYS n 1 107 LEU n 1 108 ARG n 1 109 GLU n 1 110 ASP n 1 111 TYR n 1 112 GLU n 1 113 MET n 1 114 TYR n 1 115 GLN n 1 116 ASN n 1 117 ASN n 1 118 ASN n 1 119 ASN n 1 120 ALA n 1 121 THR n 1 122 SER n 1 123 GLU n 1 124 LEU n 1 125 VAL n 1 126 PRO n 1 127 ARG n 1 128 GLY n 1 129 SER n 1 130 SER n 1 131 GLY n 1 132 GLU n 1 133 LEU n 1 134 TRP n 1 135 SER n 1 136 HIS n 1 137 PRO n 1 138 GLN n 1 139 PHE n 1 140 GLU n 1 141 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'African malaria mosquito' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'OBP22, OBPjj83b, AGAP010409' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PEST _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Anopheles gambiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 180454 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-pLysS-Star' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7PGA3_ANOGA _struct_ref.pdbx_db_accession Q7PGA3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADNNESVIESCSNAVQGAANDELKVHYRANEFPDDPVTHCFVRCIGLELNLYDDKYGVDLQANWENLGNSDDADEEFVAK HRACLEAKNLETIEDLCERAYSAFQCLREDYEMYQNNNNATSE ; _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3PJI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 123 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q7PGA3 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 144 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 144 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3PJI LEU A 124 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 145 1 1 3PJI VAL A 125 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 146 2 1 3PJI PRO A 126 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 147 3 1 3PJI ARG A 127 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 148 4 1 3PJI GLY A 128 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 149 5 1 3PJI SER A 129 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 150 6 1 3PJI SER A 130 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 151 7 1 3PJI GLY A 131 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 152 8 1 3PJI GLU A 132 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 153 9 1 3PJI LEU A 133 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 154 10 1 3PJI TRP A 134 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 155 11 1 3PJI SER A 135 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 156 12 1 3PJI HIS A 136 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 157 13 1 3PJI PRO A 137 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 158 14 1 3PJI GLN A 138 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 159 15 1 3PJI PHE A 139 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 160 16 1 3PJI GLU A 140 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 161 17 1 3PJI LYS A 141 ? UNP Q7PGA3 ? ? 'EXPRESSION TAG' 162 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH4 non-polymer . 'AMMONIUM ION' ? 'H4 N 1' 18.038 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3PJI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_percent_sol 32.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;1.8 M Ammonium citrate tribasic, 3.5% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.pdbx_collection_date 2009-08-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3PJI _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.7 _reflns.number_obs 11797 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.062 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3PJI _refine.ls_number_reflns_obs 11406 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.424 _refine.ls_d_res_high 1.704 _refine.ls_percent_reflns_obs 88.94 _refine.ls_R_factor_obs 0.1822 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1793 _refine.ls_R_factor_R_free 0.2081 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.89 _refine.ls_number_reflns_R_free 1128 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.6938 _refine.aniso_B[2][2] 0.2469 _refine.aniso_B[3][3] -0.9407 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 1.9905 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.395 _refine.solvent_model_param_bsol 50.345 _refine.pdbx_solvent_vdw_probe_radii 0.80 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.49 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.19 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 961 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 118 _refine_hist.number_atoms_total 1082 _refine_hist.d_res_high 1.704 _refine_hist.d_res_low 25.424 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 1020 'X-RAY DIFFRACTION' ? f_angle_d 0.932 ? ? 1384 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.388 ? ? 377 'X-RAY DIFFRACTION' ? f_chiral_restr 0.080 ? ? 145 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 189 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.7042 1.7817 1024 0.2245 71.00 0.2661 . . 111 . . . . 'X-RAY DIFFRACTION' . 1.7817 1.8756 1142 0.2100 81.00 0.2755 . . 129 . . . . 'X-RAY DIFFRACTION' . 1.8756 1.9931 1243 0.1983 86.00 0.2206 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.9931 2.1469 1288 0.1757 89.00 0.2306 . . 126 . . . . 'X-RAY DIFFRACTION' . 2.1469 2.3628 1344 0.1771 94.00 0.2266 . . 150 . . . . 'X-RAY DIFFRACTION' . 2.3628 2.7044 1368 0.1835 95.00 0.2421 . . 150 . . . . 'X-RAY DIFFRACTION' . 2.7044 3.4059 1412 0.1774 97.00 0.2038 . . 155 . . . . 'X-RAY DIFFRACTION' . 3.4059 25.4266 1457 0.1653 98.00 0.1646 . . 166 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3PJI _struct.title 'Crystal structure of AgamOBP22a at 1.7 angstrom in the open status for ligand binding.' _struct.pdbx_descriptor 'Odorant binding protein (AGAP010409-PA)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PJI _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'PBP-GOBP alpha helices., TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 4 ? VAL A 15 ? ASN A 25 VAL A 36 1 ? 12 HELX_P HELX_P2 2 ASN A 20 ? ALA A 29 ? ASN A 41 ALA A 50 1 ? 10 HELX_P HELX_P3 3 ASP A 35 ? LEU A 49 ? ASP A 56 LEU A 70 1 ? 15 HELX_P HELX_P4 4 ASP A 59 ? LEU A 67 ? ASP A 80 LEU A 88 1 ? 9 HELX_P HELX_P5 5 ASP A 74 ? LYS A 88 ? ASP A 95 LYS A 109 1 ? 15 HELX_P HELX_P6 6 ASN A 89 ? ILE A 93 ? ASN A 110 ILE A 114 5 ? 5 HELX_P HELX_P7 7 ASP A 95 ? CYS A 106 ? ASP A 116 CYS A 127 1 ? 12 HELX_P HELX_P8 8 LEU A 107 ? ASN A 116 ? LEU A 128 ASN A 137 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 32 A CYS 65 1_555 ? ? ? ? ? ? ? 2.021 ? disulf2 disulf ? ? A CYS 40 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 61 A CYS 118 1_555 ? ? ? ? ? ? ? 2.032 ? disulf3 disulf ? ? A CYS 84 SG ? ? ? 1_555 A CYS 106 SG ? ? A CYS 105 A CYS 127 1_555 ? ? ? ? ? ? ? 2.026 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 52 ? ASP A 53 ? TYR A 73 ASP A 74 A 2 GLY A 57 ? VAL A 58 ? GLY A 78 VAL A 79 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ASP _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 53 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ASP _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 74 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id GLY _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 57 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id GLY _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 78 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NH4 A 200' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NH4 A 201' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE NH4 A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 LEU A 23 ? LEU A 44 . ? 3_545 ? 2 AC1 4 GLU A 75 ? GLU A 96 . ? 1_555 ? 3 AC1 4 HOH E . ? HOH A 204 . ? 3_545 ? 4 AC1 4 HOH E . ? HOH A 208 . ? 3_545 ? 5 AC2 6 LEU A 85 ? LEU A 106 . ? 1_555 ? 6 AC2 6 GLU A 86 ? GLU A 107 . ? 1_555 ? 7 AC2 6 ASN A 89 ? ASN A 110 . ? 1_555 ? 8 AC2 6 LEU A 90 ? LEU A 111 . ? 1_555 ? 9 AC2 6 HIS A 136 ? HIS A 157 . ? 1_555 ? 10 AC2 6 HOH E . ? HOH A 248 . ? 1_555 ? 11 AC3 5 CYS A 40 ? CYS A 61 . ? 1_555 ? 12 AC3 5 ARG A 43 ? ARG A 64 . ? 1_555 ? 13 AC3 5 CYS A 44 ? CYS A 65 . ? 1_555 ? 14 AC3 5 HOH E . ? HOH A 220 . ? 1_555 ? 15 AC3 5 HOH E . ? HOH A 244 . ? 1_555 ? # _database_PDB_matrix.entry_id 3PJI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3PJI _atom_sites.fract_transf_matrix[1][1] 0.013838 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002306 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026524 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023231 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 22 ? ? ? A . n A 1 2 ASP 2 23 ? ? ? A . n A 1 3 ASN 3 24 ? ? ? A . n A 1 4 ASN 4 25 25 ASN ASN A . n A 1 5 GLU 5 26 26 GLU GLU A . n A 1 6 SER 6 27 27 SER SER A . n A 1 7 VAL 7 28 28 VAL VAL A . n A 1 8 ILE 8 29 29 ILE ILE A . n A 1 9 GLU 9 30 30 GLU GLU A . n A 1 10 SER 10 31 31 SER SER A . n A 1 11 CYS 11 32 32 CYS CYS A . n A 1 12 SER 12 33 33 SER SER A . n A 1 13 ASN 13 34 34 ASN ASN A . n A 1 14 ALA 14 35 35 ALA ALA A . n A 1 15 VAL 15 36 36 VAL VAL A . n A 1 16 GLN 16 37 37 GLN GLN A . n A 1 17 GLY 17 38 38 GLY GLY A . n A 1 18 ALA 18 39 39 ALA ALA A . n A 1 19 ALA 19 40 40 ALA ALA A . n A 1 20 ASN 20 41 41 ASN ASN A . n A 1 21 ASP 21 42 42 ASP ASP A . n A 1 22 GLU 22 43 43 GLU GLU A . n A 1 23 LEU 23 44 44 LEU LEU A . n A 1 24 LYS 24 45 45 LYS LYS A . n A 1 25 VAL 25 46 46 VAL VAL A . n A 1 26 HIS 26 47 47 HIS HIS A . n A 1 27 TYR 27 48 48 TYR TYR A . n A 1 28 ARG 28 49 49 ARG ARG A . n A 1 29 ALA 29 50 50 ALA ALA A . n A 1 30 ASN 30 51 51 ASN ASN A . n A 1 31 GLU 31 52 52 GLU GLU A . n A 1 32 PHE 32 53 53 PHE PHE A . n A 1 33 PRO 33 54 54 PRO PRO A . n A 1 34 ASP 34 55 55 ASP ASP A . n A 1 35 ASP 35 56 56 ASP ASP A . n A 1 36 PRO 36 57 57 PRO PRO A . n A 1 37 VAL 37 58 58 VAL VAL A . n A 1 38 THR 38 59 59 THR THR A . n A 1 39 HIS 39 60 60 HIS HIS A . n A 1 40 CYS 40 61 61 CYS CYS A . n A 1 41 PHE 41 62 62 PHE PHE A . n A 1 42 VAL 42 63 63 VAL VAL A . n A 1 43 ARG 43 64 64 ARG ARG A . n A 1 44 CYS 44 65 65 CYS CYS A . n A 1 45 ILE 45 66 66 ILE ILE A . n A 1 46 GLY 46 67 67 GLY GLY A . n A 1 47 LEU 47 68 68 LEU LEU A . n A 1 48 GLU 48 69 69 GLU GLU A . n A 1 49 LEU 49 70 70 LEU LEU A . n A 1 50 ASN 50 71 71 ASN ASN A . n A 1 51 LEU 51 72 72 LEU LEU A . n A 1 52 TYR 52 73 73 TYR TYR A . n A 1 53 ASP 53 74 74 ASP ASP A . n A 1 54 ASP 54 75 75 ASP ASP A . n A 1 55 LYS 55 76 76 LYS LYS A . n A 1 56 TYR 56 77 77 TYR TYR A . n A 1 57 GLY 57 78 78 GLY GLY A . n A 1 58 VAL 58 79 79 VAL VAL A . n A 1 59 ASP 59 80 80 ASP ASP A . n A 1 60 LEU 60 81 81 LEU LEU A . n A 1 61 GLN 61 82 82 GLN GLN A . n A 1 62 ALA 62 83 83 ALA ALA A . n A 1 63 ASN 63 84 84 ASN ASN A . n A 1 64 TRP 64 85 85 TRP TRP A . n A 1 65 GLU 65 86 86 GLU GLU A . n A 1 66 ASN 66 87 87 ASN ASN A . n A 1 67 LEU 67 88 88 LEU LEU A . n A 1 68 GLY 68 89 89 GLY GLY A . n A 1 69 ASN 69 90 90 ASN ASN A . n A 1 70 SER 70 91 91 SER SER A . n A 1 71 ASP 71 92 92 ASP ASP A . n A 1 72 ASP 72 93 93 ASP ASP A . n A 1 73 ALA 73 94 94 ALA ALA A . n A 1 74 ASP 74 95 95 ASP ASP A . n A 1 75 GLU 75 96 96 GLU GLU A . n A 1 76 GLU 76 97 97 GLU GLU A . n A 1 77 PHE 77 98 98 PHE PHE A . n A 1 78 VAL 78 99 99 VAL VAL A . n A 1 79 ALA 79 100 100 ALA ALA A . n A 1 80 LYS 80 101 101 LYS LYS A . n A 1 81 HIS 81 102 102 HIS HIS A . n A 1 82 ARG 82 103 103 ARG ARG A . n A 1 83 ALA 83 104 104 ALA ALA A . n A 1 84 CYS 84 105 105 CYS CYS A . n A 1 85 LEU 85 106 106 LEU LEU A . n A 1 86 GLU 86 107 107 GLU GLU A . n A 1 87 ALA 87 108 108 ALA ALA A . n A 1 88 LYS 88 109 109 LYS LYS A . n A 1 89 ASN 89 110 110 ASN ASN A . n A 1 90 LEU 90 111 111 LEU LEU A . n A 1 91 GLU 91 112 112 GLU GLU A . n A 1 92 THR 92 113 113 THR THR A . n A 1 93 ILE 93 114 114 ILE ILE A . n A 1 94 GLU 94 115 115 GLU GLU A . n A 1 95 ASP 95 116 116 ASP ASP A . n A 1 96 LEU 96 117 117 LEU LEU A . n A 1 97 CYS 97 118 118 CYS CYS A . n A 1 98 GLU 98 119 119 GLU GLU A . n A 1 99 ARG 99 120 120 ARG ARG A . n A 1 100 ALA 100 121 121 ALA ALA A . n A 1 101 TYR 101 122 122 TYR TYR A . n A 1 102 SER 102 123 123 SER SER A . n A 1 103 ALA 103 124 124 ALA ALA A . n A 1 104 PHE 104 125 125 PHE PHE A . n A 1 105 GLN 105 126 126 GLN GLN A . n A 1 106 CYS 106 127 127 CYS CYS A . n A 1 107 LEU 107 128 128 LEU LEU A . n A 1 108 ARG 108 129 129 ARG ARG A . n A 1 109 GLU 109 130 130 GLU GLU A . n A 1 110 ASP 110 131 131 ASP ASP A . n A 1 111 TYR 111 132 132 TYR TYR A . n A 1 112 GLU 112 133 133 GLU GLU A . n A 1 113 MET 113 134 134 MET MET A . n A 1 114 TYR 114 135 135 TYR TYR A . n A 1 115 GLN 115 136 136 GLN GLN A . n A 1 116 ASN 116 137 137 ASN ASN A . n A 1 117 ASN 117 138 ? ? ? A . n A 1 118 ASN 118 139 ? ? ? A . n A 1 119 ASN 119 140 ? ? ? A . n A 1 120 ALA 120 141 ? ? ? A . n A 1 121 THR 121 142 ? ? ? A . n A 1 122 SER 122 143 ? ? ? A . n A 1 123 GLU 123 144 ? ? ? A . n A 1 124 LEU 124 145 ? ? ? A . n A 1 125 VAL 125 146 ? ? ? A . n A 1 126 PRO 126 147 ? ? ? A . n A 1 127 ARG 127 148 ? ? ? A . n A 1 128 GLY 128 149 ? ? ? A . n A 1 129 SER 129 150 ? ? ? A . n A 1 130 SER 130 151 ? ? ? A . n A 1 131 GLY 131 152 ? ? ? A . n A 1 132 GLU 132 153 153 GLU GLU A . n A 1 133 LEU 133 154 154 LEU LEU A . n A 1 134 TRP 134 155 155 TRP TRP A . n A 1 135 SER 135 156 156 SER SER A . n A 1 136 HIS 136 157 157 HIS HIS A . n A 1 137 PRO 137 158 158 PRO PRO A . n A 1 138 GLN 138 159 ? ? ? A . n A 1 139 PHE 139 160 ? ? ? A . n A 1 140 GLU 140 161 ? ? ? A . n A 1 141 LYS 141 162 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NH4 1 200 200 NH4 NH4 A . C 2 NH4 1 201 201 NH4 NH4 A . D 2 NH4 1 202 202 NH4 NH4 A . E 3 HOH 1 203 203 HOH HOH A . E 3 HOH 2 204 204 HOH HOH A . E 3 HOH 3 205 205 HOH HOH A . E 3 HOH 4 206 206 HOH HOH A . E 3 HOH 5 207 207 HOH HOH A . E 3 HOH 6 208 208 HOH HOH A . E 3 HOH 7 209 209 HOH HOH A . E 3 HOH 8 210 210 HOH HOH A . E 3 HOH 9 211 211 HOH HOH A . E 3 HOH 10 212 212 HOH HOH A . E 3 HOH 11 213 213 HOH HOH A . E 3 HOH 12 214 214 HOH HOH A . E 3 HOH 13 215 215 HOH HOH A . E 3 HOH 14 216 216 HOH HOH A . E 3 HOH 15 217 217 HOH HOH A . E 3 HOH 16 218 218 HOH HOH A . E 3 HOH 17 219 219 HOH HOH A . E 3 HOH 18 220 220 HOH HOH A . E 3 HOH 19 221 221 HOH HOH A . E 3 HOH 20 222 222 HOH HOH A . E 3 HOH 21 223 223 HOH HOH A . E 3 HOH 22 224 224 HOH HOH A . E 3 HOH 23 225 225 HOH HOH A . E 3 HOH 24 226 226 HOH HOH A . E 3 HOH 25 227 227 HOH HOH A . E 3 HOH 26 228 228 HOH HOH A . E 3 HOH 27 229 229 HOH HOH A . E 3 HOH 28 230 230 HOH HOH A . E 3 HOH 29 231 231 HOH HOH A . E 3 HOH 30 232 232 HOH HOH A . E 3 HOH 31 233 233 HOH HOH A . E 3 HOH 32 234 234 HOH HOH A . E 3 HOH 33 235 235 HOH HOH A . E 3 HOH 34 236 236 HOH HOH A . E 3 HOH 35 237 237 HOH HOH A . E 3 HOH 36 238 238 HOH HOH A . E 3 HOH 37 239 239 HOH HOH A . E 3 HOH 38 240 240 HOH HOH A . E 3 HOH 39 241 241 HOH HOH A . E 3 HOH 40 242 242 HOH HOH A . E 3 HOH 41 243 243 HOH HOH A . E 3 HOH 42 244 244 HOH HOH A . E 3 HOH 43 245 245 HOH HOH A . E 3 HOH 44 246 246 HOH HOH A . E 3 HOH 45 247 247 HOH HOH A . E 3 HOH 46 248 248 HOH HOH A . E 3 HOH 47 249 249 HOH HOH A . E 3 HOH 48 250 250 HOH HOH A . E 3 HOH 49 251 251 HOH HOH A . E 3 HOH 50 252 252 HOH HOH A . E 3 HOH 51 253 253 HOH HOH A . E 3 HOH 52 254 254 HOH HOH A . E 3 HOH 53 255 255 HOH HOH A . E 3 HOH 54 256 256 HOH HOH A . E 3 HOH 55 257 257 HOH HOH A . E 3 HOH 56 258 258 HOH HOH A . E 3 HOH 57 259 259 HOH HOH A . E 3 HOH 58 260 260 HOH HOH A . E 3 HOH 59 261 261 HOH HOH A . E 3 HOH 60 262 262 HOH HOH A . E 3 HOH 61 263 263 HOH HOH A . E 3 HOH 62 264 264 HOH HOH A . E 3 HOH 63 265 265 HOH HOH A . E 3 HOH 64 266 266 HOH HOH A . E 3 HOH 65 267 267 HOH HOH A . E 3 HOH 66 268 268 HOH HOH A . E 3 HOH 67 269 269 HOH HOH A . E 3 HOH 68 270 270 HOH HOH A . E 3 HOH 69 271 271 HOH HOH A . E 3 HOH 70 272 272 HOH HOH A . E 3 HOH 71 273 273 HOH HOH A . E 3 HOH 72 274 274 HOH HOH A . E 3 HOH 73 275 275 HOH HOH A . E 3 HOH 74 276 276 HOH HOH A . E 3 HOH 75 277 277 HOH HOH A . E 3 HOH 76 278 278 HOH HOH A . E 3 HOH 77 279 279 HOH HOH A . E 3 HOH 78 280 280 HOH HOH A . E 3 HOH 79 281 281 HOH HOH A . E 3 HOH 80 282 282 HOH HOH A . E 3 HOH 81 283 283 HOH HOH A . E 3 HOH 82 284 284 HOH HOH A . E 3 HOH 83 285 285 HOH HOH A . E 3 HOH 84 286 286 HOH HOH A . E 3 HOH 85 287 287 HOH HOH A . E 3 HOH 86 288 288 HOH HOH A . E 3 HOH 87 289 289 HOH HOH A . E 3 HOH 88 290 290 HOH HOH A . E 3 HOH 89 291 291 HOH HOH A . E 3 HOH 90 292 292 HOH HOH A . E 3 HOH 91 293 293 HOH HOH A . E 3 HOH 92 294 294 HOH HOH A . E 3 HOH 93 295 295 HOH HOH A . E 3 HOH 94 296 296 HOH HOH A . E 3 HOH 95 297 297 HOH HOH A . E 3 HOH 96 298 298 HOH HOH A . E 3 HOH 97 299 299 HOH HOH A . E 3 HOH 98 300 300 HOH HOH A . E 3 HOH 99 301 301 HOH HOH A . E 3 HOH 100 302 302 HOH HOH A . E 3 HOH 101 303 303 HOH HOH A . E 3 HOH 102 304 304 HOH HOH A . E 3 HOH 103 305 305 HOH HOH A . E 3 HOH 104 306 306 HOH HOH A . E 3 HOH 105 307 307 HOH HOH A . E 3 HOH 106 308 308 HOH HOH A . E 3 HOH 107 309 309 HOH HOH A . E 3 HOH 108 310 310 HOH HOH A . E 3 HOH 109 311 311 HOH HOH A . E 3 HOH 110 312 312 HOH HOH A . E 3 HOH 111 313 313 HOH HOH A . E 3 HOH 112 314 314 HOH HOH A . E 3 HOH 113 315 315 HOH HOH A . E 3 HOH 114 316 316 HOH HOH A . E 3 HOH 115 317 317 HOH HOH A . E 3 HOH 116 318 318 HOH HOH A . E 3 HOH 117 319 319 HOH HOH A . E 3 HOH 118 320 320 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 215 ? E HOH . 2 1 A HOH 252 ? E HOH . 3 1 A HOH 314 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-01-11 2 'Structure model' 1 1 2012-01-25 3 'Structure model' 1 2 2018-03-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category diffrn_source # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_diffrn_source.source' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 294 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.12 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 157 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -118.90 _pdbx_validate_torsion.psi 68.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 22 ? A ALA 1 2 1 Y 1 A ASP 23 ? A ASP 2 3 1 Y 1 A ASN 24 ? A ASN 3 4 1 Y 1 A ASN 138 ? A ASN 117 5 1 Y 1 A ASN 139 ? A ASN 118 6 1 Y 1 A ASN 140 ? A ASN 119 7 1 Y 1 A ALA 141 ? A ALA 120 8 1 Y 1 A THR 142 ? A THR 121 9 1 Y 1 A SER 143 ? A SER 122 10 1 Y 1 A GLU 144 ? A GLU 123 11 1 Y 1 A LEU 145 ? A LEU 124 12 1 Y 1 A VAL 146 ? A VAL 125 13 1 Y 1 A PRO 147 ? A PRO 126 14 1 Y 1 A ARG 148 ? A ARG 127 15 1 Y 1 A GLY 149 ? A GLY 128 16 1 Y 1 A SER 150 ? A SER 129 17 1 Y 1 A SER 151 ? A SER 130 18 1 Y 1 A GLY 152 ? A GLY 131 19 1 Y 1 A GLN 159 ? A GLN 138 20 1 Y 1 A PHE 160 ? A PHE 139 21 1 Y 1 A GLU 161 ? A GLU 140 22 1 Y 1 A LYS 162 ? A LYS 141 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'AMMONIUM ION' NH4 3 water HOH #