data_3PNC # _entry.id 3PNC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3PNC pdb_00003pnc 10.2210/pdb3pnc/pdb NDB NA0838 ? ? RCSB RCSB062584 ? ? WWPDB D_1000062584 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.value' 24 3 'Structure model' '_struct_conn.pdbx_dist_value' 25 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PNC _pdbx_database_status.recvd_initial_deposition_date 2010-11-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3PML . unspecified PDB 3PMN . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bebenek, K.' 1 'Pedersen, L.C.' 2 'Kunkel, T.A.' 3 # _citation.id primary _citation.title 'Replication infidelity via a mismatch with Watson-Crick geometry.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 108 _citation.page_first 1862 _citation.page_last 1867 _citation.year 2011 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21233421 _citation.pdbx_database_id_DOI 10.1073/pnas.1012825108 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bebenek, K.' 1 ? primary 'Pedersen, L.C.' 2 ? primary 'Kunkel, T.A.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase lambda' 36736.039 1 '2.7.7.7, 4.2.99.-' ? 'UNP residues 242-575' ? 2 polymer syn "5'-D(*CP*AP*GP*TP*AP*G)-3'" 1833.242 1 ? ? ? 'Primer DNA' 3 polymer syn "5'-D(*CP*GP*GP*CP*CP*TP*TP*AP*CP*TP*G)-3'" 3325.172 1 ? ? ? 'Template DNA' 4 polymer syn "5'-D(*GP*CP*CP*G)-3'" 1191.818 1 ? ? ? 'Downstream DNA' 5 non-polymer syn "2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine" 505.208 1 ? ? ? ? 6 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 8 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 9 water nat water 18.015 310 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol Lambda, DNA polymerase beta-2, Pol beta2, DNA polymerase kappa' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVKGETKYLGVCRLPGPGRRH RRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLP YREPAERDW ; ;AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVKGETKYLGVCRLPGPGRRH RRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLP YREPAERDW ; A ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DG)(DT)(DA)(DG)' CAGTAG B ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DC)(DC)(DT)(DT)(DA)(DC)(DT)(DG)' CGGCCTTACTG C ? 4 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DG)' GCCG D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 "2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine" 1GC 6 'MAGNESIUM ION' MG 7 'SODIUM ION' NA 8 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 9 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLN n 1 3 PRO n 1 4 SER n 1 5 SER n 1 6 GLN n 1 7 LYS n 1 8 ALA n 1 9 THR n 1 10 ASN n 1 11 HIS n 1 12 ASN n 1 13 LEU n 1 14 HIS n 1 15 ILE n 1 16 THR n 1 17 GLU n 1 18 LYS n 1 19 LEU n 1 20 GLU n 1 21 VAL n 1 22 LEU n 1 23 ALA n 1 24 LYS n 1 25 ALA n 1 26 TYR n 1 27 SER n 1 28 VAL n 1 29 GLN n 1 30 GLY n 1 31 ASP n 1 32 LYS n 1 33 TRP n 1 34 ARG n 1 35 ALA n 1 36 LEU n 1 37 GLY n 1 38 TYR n 1 39 ALA n 1 40 LYS n 1 41 ALA n 1 42 ILE n 1 43 ASN n 1 44 ALA n 1 45 LEU n 1 46 LYS n 1 47 SER n 1 48 PHE n 1 49 HIS n 1 50 LYS n 1 51 PRO n 1 52 VAL n 1 53 THR n 1 54 SER n 1 55 TYR n 1 56 GLN n 1 57 GLU n 1 58 ALA n 1 59 CYS n 1 60 SER n 1 61 ILE n 1 62 PRO n 1 63 GLY n 1 64 ILE n 1 65 GLY n 1 66 LYS n 1 67 ARG n 1 68 MET n 1 69 ALA n 1 70 GLU n 1 71 LYS n 1 72 ILE n 1 73 ILE n 1 74 GLU n 1 75 ILE n 1 76 LEU n 1 77 GLU n 1 78 SER n 1 79 GLY n 1 80 HIS n 1 81 LEU n 1 82 ARG n 1 83 LYS n 1 84 LEU n 1 85 ASP n 1 86 HIS n 1 87 ILE n 1 88 SER n 1 89 GLU n 1 90 SER n 1 91 VAL n 1 92 PRO n 1 93 VAL n 1 94 LEU n 1 95 GLU n 1 96 LEU n 1 97 PHE n 1 98 SER n 1 99 ASN n 1 100 ILE n 1 101 TRP n 1 102 GLY n 1 103 ALA n 1 104 GLY n 1 105 THR n 1 106 LYS n 1 107 THR n 1 108 ALA n 1 109 GLN n 1 110 MET n 1 111 TRP n 1 112 TYR n 1 113 GLN n 1 114 GLN n 1 115 GLY n 1 116 PHE n 1 117 ARG n 1 118 SER n 1 119 LEU n 1 120 GLU n 1 121 ASP n 1 122 ILE n 1 123 ARG n 1 124 SER n 1 125 GLN n 1 126 ALA n 1 127 SER n 1 128 LEU n 1 129 THR n 1 130 THR n 1 131 GLN n 1 132 GLN n 1 133 ALA n 1 134 ILE n 1 135 GLY n 1 136 LEU n 1 137 LYS n 1 138 HIS n 1 139 TYR n 1 140 SER n 1 141 ASP n 1 142 PHE n 1 143 LEU n 1 144 GLU n 1 145 ARG n 1 146 MET n 1 147 PRO n 1 148 ARG n 1 149 GLU n 1 150 GLU n 1 151 ALA n 1 152 THR n 1 153 GLU n 1 154 ILE n 1 155 GLU n 1 156 GLN n 1 157 THR n 1 158 VAL n 1 159 GLN n 1 160 LYS n 1 161 ALA n 1 162 ALA n 1 163 GLN n 1 164 ALA n 1 165 PHE n 1 166 ASN n 1 167 SER n 1 168 GLY n 1 169 LEU n 1 170 LEU n 1 171 CYS n 1 172 VAL n 1 173 ALA n 1 174 CYS n 1 175 GLY n 1 176 SER n 1 177 TYR n 1 178 ARG n 1 179 ARG n 1 180 GLY n 1 181 LYS n 1 182 ALA n 1 183 THR n 1 184 CYS n 1 185 GLY n 1 186 ASP n 1 187 VAL n 1 188 ASP n 1 189 VAL n 1 190 LEU n 1 191 ILE n 1 192 THR n 1 193 HIS n 1 194 PRO n 1 195 ASP n 1 196 GLY n 1 197 ARG n 1 198 SER n 1 199 HIS n 1 200 ARG n 1 201 GLY n 1 202 ILE n 1 203 PHE n 1 204 SER n 1 205 ARG n 1 206 LEU n 1 207 LEU n 1 208 ASP n 1 209 SER n 1 210 LEU n 1 211 ARG n 1 212 GLN n 1 213 GLU n 1 214 GLY n 1 215 PHE n 1 216 LEU n 1 217 THR n 1 218 ASP n 1 219 ASP n 1 220 LEU n 1 221 VAL n 1 222 LYS n 1 223 GLY n 1 224 GLU n 1 225 THR n 1 226 LYS n 1 227 TYR n 1 228 LEU n 1 229 GLY n 1 230 VAL n 1 231 CYS n 1 232 ARG n 1 233 LEU n 1 234 PRO n 1 235 GLY n 1 236 PRO n 1 237 GLY n 1 238 ARG n 1 239 ARG n 1 240 HIS n 1 241 ARG n 1 242 ARG n 1 243 LEU n 1 244 ASP n 1 245 ILE n 1 246 ILE n 1 247 VAL n 1 248 VAL n 1 249 PRO n 1 250 TYR n 1 251 SER n 1 252 GLU n 1 253 PHE n 1 254 ALA n 1 255 CYS n 1 256 ALA n 1 257 LEU n 1 258 LEU n 1 259 TYR n 1 260 PHE n 1 261 THR n 1 262 GLY n 1 263 SER n 1 264 ALA n 1 265 HIS n 1 266 PHE n 1 267 ASN n 1 268 ARG n 1 269 SER n 1 270 MET n 1 271 ARG n 1 272 ALA n 1 273 LEU n 1 274 ALA n 1 275 LYS n 1 276 THR n 1 277 LYS n 1 278 GLY n 1 279 MET n 1 280 SER n 1 281 LEU n 1 282 SER n 1 283 GLU n 1 284 HIS n 1 285 ALA n 1 286 LEU n 1 287 SER n 1 288 THR n 1 289 ALA n 1 290 VAL n 1 291 VAL n 1 292 ARG n 1 293 ASN n 1 294 THR n 1 295 HIS n 1 296 GLY n 1 297 CYS n 1 298 LYS n 1 299 VAL n 1 300 GLY n 1 301 PRO n 1 302 GLY n 1 303 ARG n 1 304 VAL n 1 305 LEU n 1 306 PRO n 1 307 THR n 1 308 PRO n 1 309 THR n 1 310 GLU n 1 311 LYS n 1 312 ASP n 1 313 VAL n 1 314 PHE n 1 315 ARG n 1 316 LEU n 1 317 LEU n 1 318 GLY n 1 319 LEU n 1 320 PRO n 1 321 TYR n 1 322 ARG n 1 323 GLU n 1 324 PRO n 1 325 ALA n 1 326 GLU n 1 327 ARG n 1 328 ASP n 1 329 TRP n 2 1 DC n 2 2 DA n 2 3 DG n 2 4 DT n 2 5 DA n 2 6 DG n 3 1 DC n 3 2 DG n 3 3 DG n 3 4 DC n 3 5 DC n 3 6 DT n 3 7 DT n 3 8 DA n 3 9 DC n 3 10 DT n 3 11 DG n 4 1 DG n 4 2 DC n 4 3 DC n 4 4 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLL _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET22 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1GC non-polymer . "2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine" ? 'C11 H18 N5 O12 P3' 505.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 242 ? ? ? A . n A 1 2 GLN 2 243 ? ? ? A . n A 1 3 PRO 3 244 ? ? ? A . n A 1 4 SER 4 245 ? ? ? A . n A 1 5 SER 5 246 ? ? ? A . n A 1 6 GLN 6 247 ? ? ? A . n A 1 7 LYS 7 248 ? ? ? A . n A 1 8 ALA 8 249 ? ? ? A . n A 1 9 THR 9 250 250 THR THR A . n A 1 10 ASN 10 251 251 ASN ASN A . n A 1 11 HIS 11 252 252 HIS HIS A . n A 1 12 ASN 12 253 253 ASN ASN A . n A 1 13 LEU 13 254 254 LEU LEU A . n A 1 14 HIS 14 255 255 HIS HIS A . n A 1 15 ILE 15 256 256 ILE ILE A . n A 1 16 THR 16 257 257 THR THR A . n A 1 17 GLU 17 258 258 GLU GLU A . n A 1 18 LYS 18 259 259 LYS LYS A . n A 1 19 LEU 19 260 260 LEU LEU A . n A 1 20 GLU 20 261 261 GLU GLU A . n A 1 21 VAL 21 262 262 VAL VAL A . n A 1 22 LEU 22 263 263 LEU LEU A . n A 1 23 ALA 23 264 264 ALA ALA A . n A 1 24 LYS 24 265 265 LYS LYS A . n A 1 25 ALA 25 266 266 ALA ALA A . n A 1 26 TYR 26 267 267 TYR TYR A . n A 1 27 SER 27 268 268 SER SER A . n A 1 28 VAL 28 269 269 VAL VAL A . n A 1 29 GLN 29 270 270 GLN GLN A . n A 1 30 GLY 30 271 271 GLY GLY A . n A 1 31 ASP 31 272 272 ASP ASP A . n A 1 32 LYS 32 273 273 LYS LYS A . n A 1 33 TRP 33 274 274 TRP TRP A . n A 1 34 ARG 34 275 275 ARG ARG A . n A 1 35 ALA 35 276 276 ALA ALA A . n A 1 36 LEU 36 277 277 LEU LEU A . n A 1 37 GLY 37 278 278 GLY GLY A . n A 1 38 TYR 38 279 279 TYR TYR A . n A 1 39 ALA 39 280 280 ALA ALA A . n A 1 40 LYS 40 281 281 LYS LYS A . n A 1 41 ALA 41 282 282 ALA ALA A . n A 1 42 ILE 42 283 283 ILE ILE A . n A 1 43 ASN 43 284 284 ASN ASN A . n A 1 44 ALA 44 285 285 ALA ALA A . n A 1 45 LEU 45 286 286 LEU LEU A . n A 1 46 LYS 46 287 287 LYS LYS A . n A 1 47 SER 47 288 288 SER SER A . n A 1 48 PHE 48 289 289 PHE PHE A . n A 1 49 HIS 49 290 290 HIS HIS A . n A 1 50 LYS 50 291 291 LYS LYS A . n A 1 51 PRO 51 292 292 PRO PRO A . n A 1 52 VAL 52 293 293 VAL VAL A . n A 1 53 THR 53 294 294 THR THR A . n A 1 54 SER 54 295 295 SER SER A . n A 1 55 TYR 55 296 296 TYR TYR A . n A 1 56 GLN 56 297 297 GLN GLN A . n A 1 57 GLU 57 298 298 GLU GLU A . n A 1 58 ALA 58 299 299 ALA ALA A . n A 1 59 CYS 59 300 300 CYS CYS A . n A 1 60 SER 60 301 301 SER SER A . n A 1 61 ILE 61 302 302 ILE ILE A . n A 1 62 PRO 62 303 303 PRO PRO A . n A 1 63 GLY 63 304 304 GLY GLY A . n A 1 64 ILE 64 305 305 ILE ILE A . n A 1 65 GLY 65 306 306 GLY GLY A . n A 1 66 LYS 66 307 307 LYS LYS A . n A 1 67 ARG 67 308 308 ARG ARG A . n A 1 68 MET 68 309 309 MET MET A . n A 1 69 ALA 69 310 310 ALA ALA A . n A 1 70 GLU 70 311 311 GLU GLU A . n A 1 71 LYS 71 312 312 LYS LYS A . n A 1 72 ILE 72 313 313 ILE ILE A . n A 1 73 ILE 73 314 314 ILE ILE A . n A 1 74 GLU 74 315 315 GLU GLU A . n A 1 75 ILE 75 316 316 ILE ILE A . n A 1 76 LEU 76 317 317 LEU LEU A . n A 1 77 GLU 77 318 318 GLU GLU A . n A 1 78 SER 78 319 319 SER SER A . n A 1 79 GLY 79 320 320 GLY GLY A . n A 1 80 HIS 80 321 321 HIS HIS A . n A 1 81 LEU 81 322 322 LEU LEU A . n A 1 82 ARG 82 323 323 ARG ARG A . n A 1 83 LYS 83 324 324 LYS LYS A . n A 1 84 LEU 84 325 325 LEU LEU A . n A 1 85 ASP 85 326 326 ASP ASP A . n A 1 86 HIS 86 327 327 HIS HIS A . n A 1 87 ILE 87 328 328 ILE ILE A . n A 1 88 SER 88 329 329 SER SER A . n A 1 89 GLU 89 330 330 GLU GLU A . n A 1 90 SER 90 331 331 SER SER A . n A 1 91 VAL 91 332 332 VAL VAL A . n A 1 92 PRO 92 333 333 PRO PRO A . n A 1 93 VAL 93 334 334 VAL VAL A . n A 1 94 LEU 94 335 335 LEU LEU A . n A 1 95 GLU 95 336 336 GLU GLU A . n A 1 96 LEU 96 337 337 LEU LEU A . n A 1 97 PHE 97 338 338 PHE PHE A . n A 1 98 SER 98 339 339 SER SER A . n A 1 99 ASN 99 340 340 ASN ASN A . n A 1 100 ILE 100 341 341 ILE ILE A . n A 1 101 TRP 101 342 342 TRP TRP A . n A 1 102 GLY 102 343 343 GLY GLY A . n A 1 103 ALA 103 344 344 ALA ALA A . n A 1 104 GLY 104 345 345 GLY GLY A . n A 1 105 THR 105 346 346 THR THR A . n A 1 106 LYS 106 347 347 LYS LYS A . n A 1 107 THR 107 348 348 THR THR A . n A 1 108 ALA 108 349 349 ALA ALA A . n A 1 109 GLN 109 350 350 GLN GLN A . n A 1 110 MET 110 351 351 MET MET A . n A 1 111 TRP 111 352 352 TRP TRP A . n A 1 112 TYR 112 353 353 TYR TYR A . n A 1 113 GLN 113 354 354 GLN GLN A . n A 1 114 GLN 114 355 355 GLN GLN A . n A 1 115 GLY 115 356 356 GLY GLY A . n A 1 116 PHE 116 357 357 PHE PHE A . n A 1 117 ARG 117 358 358 ARG ARG A . n A 1 118 SER 118 359 359 SER SER A . n A 1 119 LEU 119 360 360 LEU LEU A . n A 1 120 GLU 120 361 361 GLU GLU A . n A 1 121 ASP 121 362 362 ASP ASP A . n A 1 122 ILE 122 363 363 ILE ILE A . n A 1 123 ARG 123 364 364 ARG ARG A . n A 1 124 SER 124 365 365 SER SER A . n A 1 125 GLN 125 366 366 GLN GLN A . n A 1 126 ALA 126 367 367 ALA ALA A . n A 1 127 SER 127 368 368 SER SER A . n A 1 128 LEU 128 369 369 LEU LEU A . n A 1 129 THR 129 370 370 THR THR A . n A 1 130 THR 130 371 371 THR THR A . n A 1 131 GLN 131 372 372 GLN GLN A . n A 1 132 GLN 132 373 373 GLN GLN A . n A 1 133 ALA 133 374 374 ALA ALA A . n A 1 134 ILE 134 375 375 ILE ILE A . n A 1 135 GLY 135 376 376 GLY GLY A . n A 1 136 LEU 136 377 377 LEU LEU A . n A 1 137 LYS 137 378 378 LYS LYS A . n A 1 138 HIS 138 379 379 HIS HIS A . n A 1 139 TYR 139 380 380 TYR TYR A . n A 1 140 SER 140 381 381 SER SER A . n A 1 141 ASP 141 382 382 ASP ASP A . n A 1 142 PHE 142 383 383 PHE PHE A . n A 1 143 LEU 143 384 384 LEU LEU A . n A 1 144 GLU 144 385 385 GLU GLU A . n A 1 145 ARG 145 386 386 ARG ARG A . n A 1 146 MET 146 387 387 MET MET A . n A 1 147 PRO 147 388 388 PRO PRO A . n A 1 148 ARG 148 389 389 ARG ARG A . n A 1 149 GLU 149 390 390 GLU GLU A . n A 1 150 GLU 150 391 391 GLU GLU A . n A 1 151 ALA 151 392 392 ALA ALA A . n A 1 152 THR 152 393 393 THR THR A . n A 1 153 GLU 153 394 394 GLU GLU A . n A 1 154 ILE 154 395 395 ILE ILE A . n A 1 155 GLU 155 396 396 GLU GLU A . n A 1 156 GLN 156 397 397 GLN GLN A . n A 1 157 THR 157 398 398 THR THR A . n A 1 158 VAL 158 399 399 VAL VAL A . n A 1 159 GLN 159 400 400 GLN GLN A . n A 1 160 LYS 160 401 401 LYS LYS A . n A 1 161 ALA 161 402 402 ALA ALA A . n A 1 162 ALA 162 403 403 ALA ALA A . n A 1 163 GLN 163 404 404 GLN GLN A . n A 1 164 ALA 164 405 405 ALA ALA A . n A 1 165 PHE 165 406 406 PHE PHE A . n A 1 166 ASN 166 407 407 ASN ASN A . n A 1 167 SER 167 408 408 SER SER A . n A 1 168 GLY 168 409 409 GLY GLY A . n A 1 169 LEU 169 410 410 LEU LEU A . n A 1 170 LEU 170 411 411 LEU LEU A . n A 1 171 CYS 171 412 412 CYS CYS A . n A 1 172 VAL 172 413 413 VAL VAL A . n A 1 173 ALA 173 414 414 ALA ALA A . n A 1 174 CYS 174 415 415 CYS CYS A . n A 1 175 GLY 175 416 416 GLY GLY A . n A 1 176 SER 176 417 417 SER SER A . n A 1 177 TYR 177 418 418 TYR TYR A . n A 1 178 ARG 178 419 419 ARG ARG A . n A 1 179 ARG 179 420 420 ARG ARG A . n A 1 180 GLY 180 421 421 GLY GLY A . n A 1 181 LYS 181 422 422 LYS LYS A . n A 1 182 ALA 182 423 423 ALA ALA A . n A 1 183 THR 183 424 424 THR THR A . n A 1 184 CYS 184 425 425 CYS CYS A . n A 1 185 GLY 185 426 426 GLY GLY A . n A 1 186 ASP 186 427 427 ASP ASP A . n A 1 187 VAL 187 428 428 VAL VAL A . n A 1 188 ASP 188 429 429 ASP ASP A . n A 1 189 VAL 189 430 430 VAL VAL A . n A 1 190 LEU 190 431 431 LEU LEU A . n A 1 191 ILE 191 432 432 ILE ILE A . n A 1 192 THR 192 433 433 THR THR A . n A 1 193 HIS 193 434 434 HIS HIS A . n A 1 194 PRO 194 435 435 PRO PRO A . n A 1 195 ASP 195 436 436 ASP ASP A . n A 1 196 GLY 196 437 437 GLY GLY A . n A 1 197 ARG 197 438 438 ARG ARG A . n A 1 198 SER 198 439 439 SER SER A . n A 1 199 HIS 199 440 440 HIS HIS A . n A 1 200 ARG 200 441 441 ARG ARG A . n A 1 201 GLY 201 442 442 GLY GLY A . n A 1 202 ILE 202 443 443 ILE ILE A . n A 1 203 PHE 203 444 444 PHE PHE A . n A 1 204 SER 204 445 445 SER SER A . n A 1 205 ARG 205 446 446 ARG ARG A . n A 1 206 LEU 206 447 447 LEU LEU A . n A 1 207 LEU 207 448 448 LEU LEU A . n A 1 208 ASP 208 449 449 ASP ASP A . n A 1 209 SER 209 450 450 SER SER A . n A 1 210 LEU 210 451 451 LEU LEU A . n A 1 211 ARG 211 452 452 ARG ARG A . n A 1 212 GLN 212 453 453 GLN GLN A . n A 1 213 GLU 213 454 454 GLU GLU A . n A 1 214 GLY 214 455 455 GLY GLY A . n A 1 215 PHE 215 456 456 PHE PHE A . n A 1 216 LEU 216 457 457 LEU LEU A . n A 1 217 THR 217 458 458 THR THR A . n A 1 218 ASP 218 459 459 ASP ASP A . n A 1 219 ASP 219 460 460 ASP ASP A . n A 1 220 LEU 220 461 461 LEU LEU A . n A 1 221 VAL 221 462 462 VAL VAL A . n A 1 222 LYS 222 463 463 LYS LYS A . n A 1 223 GLY 223 464 464 GLY GLY A . n A 1 224 GLU 224 470 470 GLU GLU A . n A 1 225 THR 225 471 471 THR THR A . n A 1 226 LYS 226 472 472 LYS LYS A . n A 1 227 TYR 227 473 473 TYR TYR A . n A 1 228 LEU 228 474 474 LEU LEU A . n A 1 229 GLY 229 475 475 GLY GLY A . n A 1 230 VAL 230 476 476 VAL VAL A . n A 1 231 CYS 231 477 477 CYS CYS A . n A 1 232 ARG 232 478 478 ARG ARG A . n A 1 233 LEU 233 479 479 LEU LEU A . n A 1 234 PRO 234 480 480 PRO PRO A . n A 1 235 GLY 235 481 481 GLY GLY A . n A 1 236 PRO 236 482 482 PRO PRO A . n A 1 237 GLY 237 483 483 GLY GLY A . n A 1 238 ARG 238 484 484 ARG ARG A . n A 1 239 ARG 239 485 485 ARG ARG A . n A 1 240 HIS 240 486 486 HIS HIS A . n A 1 241 ARG 241 487 487 ARG ARG A . n A 1 242 ARG 242 488 488 ARG ARG A . n A 1 243 LEU 243 489 489 LEU LEU A . n A 1 244 ASP 244 490 490 ASP ASP A . n A 1 245 ILE 245 491 491 ILE ILE A . n A 1 246 ILE 246 492 492 ILE ILE A . n A 1 247 VAL 247 493 493 VAL VAL A . n A 1 248 VAL 248 494 494 VAL VAL A . n A 1 249 PRO 249 495 495 PRO PRO A . n A 1 250 TYR 250 496 496 TYR TYR A . n A 1 251 SER 251 497 497 SER SER A . n A 1 252 GLU 252 498 498 GLU GLU A . n A 1 253 PHE 253 499 499 PHE PHE A . n A 1 254 ALA 254 500 500 ALA ALA A . n A 1 255 CYS 255 501 501 CYS CYS A . n A 1 256 ALA 256 502 502 ALA ALA A . n A 1 257 LEU 257 503 503 LEU LEU A . n A 1 258 LEU 258 504 504 LEU LEU A . n A 1 259 TYR 259 505 505 TYR TYR A . n A 1 260 PHE 260 506 506 PHE PHE A . n A 1 261 THR 261 507 507 THR THR A . n A 1 262 GLY 262 508 508 GLY GLY A . n A 1 263 SER 263 509 509 SER SER A . n A 1 264 ALA 264 510 510 ALA ALA A . n A 1 265 HIS 265 511 511 HIS HIS A . n A 1 266 PHE 266 512 512 PHE PHE A . n A 1 267 ASN 267 513 513 ASN ASN A . n A 1 268 ARG 268 514 514 ARG ARG A . n A 1 269 SER 269 515 515 SER SER A . n A 1 270 MET 270 516 516 MET MET A . n A 1 271 ARG 271 517 517 ARG ARG A . n A 1 272 ALA 272 518 518 ALA ALA A . n A 1 273 LEU 273 519 519 LEU LEU A . n A 1 274 ALA 274 520 520 ALA ALA A . n A 1 275 LYS 275 521 521 LYS LYS A . n A 1 276 THR 276 522 522 THR THR A . n A 1 277 LYS 277 523 523 LYS LYS A . n A 1 278 GLY 278 524 524 GLY GLY A . n A 1 279 MET 279 525 525 MET MET A . n A 1 280 SER 280 526 526 SER SER A . n A 1 281 LEU 281 527 527 LEU LEU A . n A 1 282 SER 282 528 528 SER SER A . n A 1 283 GLU 283 529 529 GLU GLU A . n A 1 284 HIS 284 530 530 HIS HIS A . n A 1 285 ALA 285 531 531 ALA ALA A . n A 1 286 LEU 286 532 532 LEU LEU A . n A 1 287 SER 287 533 533 SER SER A . n A 1 288 THR 288 534 534 THR THR A . n A 1 289 ALA 289 535 535 ALA ALA A . n A 1 290 VAL 290 536 536 VAL VAL A . n A 1 291 VAL 291 537 537 VAL VAL A . n A 1 292 ARG 292 538 538 ARG ARG A . n A 1 293 ASN 293 539 ? ? ? A . n A 1 294 THR 294 540 ? ? ? A . n A 1 295 HIS 295 541 ? ? ? A . n A 1 296 GLY 296 542 ? ? ? A . n A 1 297 CYS 297 543 ? ? ? A . n A 1 298 LYS 298 544 544 LYS LYS A . n A 1 299 VAL 299 545 545 VAL VAL A . n A 1 300 GLY 300 546 546 GLY GLY A . n A 1 301 PRO 301 547 547 PRO PRO A . n A 1 302 GLY 302 548 548 GLY GLY A . n A 1 303 ARG 303 549 549 ARG ARG A . n A 1 304 VAL 304 550 550 VAL VAL A . n A 1 305 LEU 305 551 551 LEU LEU A . n A 1 306 PRO 306 552 552 PRO PRO A . n A 1 307 THR 307 553 553 THR THR A . n A 1 308 PRO 308 554 554 PRO PRO A . n A 1 309 THR 309 555 555 THR THR A . n A 1 310 GLU 310 556 556 GLU GLU A . n A 1 311 LYS 311 557 557 LYS LYS A . n A 1 312 ASP 312 558 558 ASP ASP A . n A 1 313 VAL 313 559 559 VAL VAL A . n A 1 314 PHE 314 560 560 PHE PHE A . n A 1 315 ARG 315 561 561 ARG ARG A . n A 1 316 LEU 316 562 562 LEU LEU A . n A 1 317 LEU 317 563 563 LEU LEU A . n A 1 318 GLY 318 564 564 GLY GLY A . n A 1 319 LEU 319 565 565 LEU LEU A . n A 1 320 PRO 320 566 566 PRO PRO A . n A 1 321 TYR 321 567 567 TYR TYR A . n A 1 322 ARG 322 568 568 ARG ARG A . n A 1 323 GLU 323 569 569 GLU GLU A . n A 1 324 PRO 324 570 570 PRO PRO A . n A 1 325 ALA 325 571 571 ALA ALA A . n A 1 326 GLU 326 572 572 GLU GLU A . n A 1 327 ARG 327 573 573 ARG ARG A . n A 1 328 ASP 328 574 574 ASP ASP A . n A 1 329 TRP 329 575 575 TRP TRP A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DA 2 2 2 DA DA B . n B 2 3 DG 3 3 3 DG DG B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DA 5 5 5 DA DA B . n B 2 6 DG 6 6 6 DG DG B . n C 3 1 DC 1 1 1 DC DC C . n C 3 2 DG 2 2 2 DG DG C . n C 3 3 DG 3 3 3 DG DG C . n C 3 4 DC 4 4 4 DC DC C . n C 3 5 DC 5 5 5 DC DC C . n C 3 6 DT 6 6 6 DT DT C . n C 3 7 DT 7 7 7 DT DT C . n C 3 8 DA 8 8 8 DA DA C . n C 3 9 DC 9 9 9 DC DC C . n C 3 10 DT 10 10 10 DT DT C . n C 3 11 DG 11 11 11 DG DG C . n D 4 1 DG 1 1 1 DG DG D . n D 4 2 DC 2 2 2 DC DC D . n D 4 3 DC 3 3 3 DC DC D . n D 4 4 DG 4 4 4 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 1GC 1 1 1 1GC 1GC A . F 6 MG 1 576 576 MG MG A . G 7 NA 1 2 2 NA NA A . H 7 NA 1 5 5 NA NA A . I 8 TRS 1 577 577 TRS TRS A . J 7 NA 1 7 7 NA NA B . K 9 HOH 1 3 3 HOH HOH A . K 9 HOH 2 6 6 HOH HOH A . K 9 HOH 3 7 7 HOH HOH A . K 9 HOH 4 9 9 HOH HOH A . K 9 HOH 5 10 10 HOH HOH A . K 9 HOH 6 12 12 HOH HOH A . K 9 HOH 7 14 14 HOH HOH A . K 9 HOH 8 15 15 HOH HOH A . K 9 HOH 9 16 16 HOH HOH A . K 9 HOH 10 20 20 HOH HOH A . K 9 HOH 11 23 23 HOH HOH A . K 9 HOH 12 25 25 HOH HOH A . K 9 HOH 13 26 26 HOH HOH A . K 9 HOH 14 28 28 HOH HOH A . K 9 HOH 15 29 29 HOH HOH A . K 9 HOH 16 30 30 HOH HOH A . K 9 HOH 17 31 31 HOH HOH A . K 9 HOH 18 32 32 HOH HOH A . K 9 HOH 19 33 33 HOH HOH A . K 9 HOH 20 36 36 HOH HOH A . K 9 HOH 21 39 39 HOH HOH A . K 9 HOH 22 40 40 HOH HOH A . K 9 HOH 23 41 41 HOH HOH A . K 9 HOH 24 43 43 HOH HOH A . K 9 HOH 25 44 44 HOH HOH A . K 9 HOH 26 45 45 HOH HOH A . K 9 HOH 27 47 47 HOH HOH A . K 9 HOH 28 48 48 HOH HOH A . K 9 HOH 29 49 49 HOH HOH A . K 9 HOH 30 50 50 HOH HOH A . K 9 HOH 31 51 51 HOH HOH A . K 9 HOH 32 52 52 HOH HOH A . K 9 HOH 33 53 53 HOH HOH A . K 9 HOH 34 55 55 HOH HOH A . K 9 HOH 35 56 56 HOH HOH A . K 9 HOH 36 58 58 HOH HOH A . K 9 HOH 37 59 59 HOH HOH A . K 9 HOH 38 60 60 HOH HOH A . K 9 HOH 39 61 61 HOH HOH A . K 9 HOH 40 63 63 HOH HOH A . K 9 HOH 41 64 64 HOH HOH A . K 9 HOH 42 65 65 HOH HOH A . K 9 HOH 43 67 67 HOH HOH A . K 9 HOH 44 70 70 HOH HOH A . K 9 HOH 45 71 71 HOH HOH A . K 9 HOH 46 72 72 HOH HOH A . K 9 HOH 47 73 73 HOH HOH A . K 9 HOH 48 74 74 HOH HOH A . K 9 HOH 49 75 75 HOH HOH A . K 9 HOH 50 76 76 HOH HOH A . K 9 HOH 51 77 77 HOH HOH A . K 9 HOH 52 79 79 HOH HOH A . K 9 HOH 53 80 80 HOH HOH A . K 9 HOH 54 81 81 HOH HOH A . K 9 HOH 55 82 82 HOH HOH A . K 9 HOH 56 84 84 HOH HOH A . K 9 HOH 57 86 86 HOH HOH A . K 9 HOH 58 87 87 HOH HOH A . K 9 HOH 59 88 88 HOH HOH A . K 9 HOH 60 89 89 HOH HOH A . K 9 HOH 61 90 90 HOH HOH A . K 9 HOH 62 91 91 HOH HOH A . K 9 HOH 63 93 93 HOH HOH A . K 9 HOH 64 94 94 HOH HOH A . K 9 HOH 65 95 95 HOH HOH A . K 9 HOH 66 96 96 HOH HOH A . K 9 HOH 67 97 97 HOH HOH A . K 9 HOH 68 98 98 HOH HOH A . K 9 HOH 69 100 100 HOH HOH A . K 9 HOH 70 101 101 HOH HOH A . K 9 HOH 71 102 102 HOH HOH A . K 9 HOH 72 103 103 HOH HOH A . K 9 HOH 73 104 104 HOH HOH A . K 9 HOH 74 106 106 HOH HOH A . K 9 HOH 75 108 108 HOH HOH A . K 9 HOH 76 109 109 HOH HOH A . K 9 HOH 77 111 111 HOH HOH A . K 9 HOH 78 112 112 HOH HOH A . K 9 HOH 79 113 113 HOH HOH A . K 9 HOH 80 115 115 HOH HOH A . K 9 HOH 81 116 116 HOH HOH A . K 9 HOH 82 118 118 HOH HOH A . K 9 HOH 83 119 119 HOH HOH A . K 9 HOH 84 120 120 HOH HOH A . K 9 HOH 85 121 121 HOH HOH A . K 9 HOH 86 122 122 HOH HOH A . K 9 HOH 87 124 124 HOH HOH A . K 9 HOH 88 126 126 HOH HOH A . K 9 HOH 89 127 127 HOH HOH A . K 9 HOH 90 128 128 HOH HOH A . K 9 HOH 91 129 129 HOH HOH A . K 9 HOH 92 130 130 HOH HOH A . K 9 HOH 93 131 131 HOH HOH A . K 9 HOH 94 132 132 HOH HOH A . K 9 HOH 95 134 134 HOH HOH A . K 9 HOH 96 140 140 HOH HOH A . K 9 HOH 97 142 142 HOH HOH A . K 9 HOH 98 144 144 HOH HOH A . K 9 HOH 99 145 145 HOH HOH A . K 9 HOH 100 147 147 HOH HOH A . K 9 HOH 101 149 149 HOH HOH A . K 9 HOH 102 150 150 HOH HOH A . K 9 HOH 103 152 152 HOH HOH A . K 9 HOH 104 154 154 HOH HOH A . K 9 HOH 105 155 155 HOH HOH A . K 9 HOH 106 156 156 HOH HOH A . K 9 HOH 107 162 162 HOH HOH A . K 9 HOH 108 200 200 HOH HOH A . K 9 HOH 109 201 201 HOH HOH A . K 9 HOH 110 202 202 HOH HOH A . K 9 HOH 111 203 203 HOH HOH A . K 9 HOH 112 207 207 HOH HOH A . K 9 HOH 113 208 208 HOH HOH A . K 9 HOH 114 209 209 HOH HOH A . K 9 HOH 115 210 210 HOH HOH A . K 9 HOH 116 213 213 HOH HOH A . K 9 HOH 117 214 214 HOH HOH A . K 9 HOH 118 215 215 HOH HOH A . K 9 HOH 119 216 216 HOH HOH A . K 9 HOH 120 217 217 HOH HOH A . K 9 HOH 121 218 218 HOH HOH A . K 9 HOH 122 219 219 HOH HOH A . K 9 HOH 123 220 220 HOH HOH A . K 9 HOH 124 221 221 HOH HOH A . K 9 HOH 125 222 222 HOH HOH A . K 9 HOH 126 223 223 HOH HOH A . K 9 HOH 127 228 228 HOH HOH A . K 9 HOH 128 229 229 HOH HOH A . K 9 HOH 129 230 230 HOH HOH A . K 9 HOH 130 231 231 HOH HOH A . K 9 HOH 131 232 232 HOH HOH A . K 9 HOH 132 234 234 HOH HOH A . K 9 HOH 133 236 236 HOH HOH A . K 9 HOH 134 237 237 HOH HOH A . K 9 HOH 135 238 238 HOH HOH A . K 9 HOH 136 239 239 HOH HOH A . K 9 HOH 137 240 240 HOH HOH A . K 9 HOH 138 241 241 HOH HOH A . K 9 HOH 139 578 578 HOH HOH A . K 9 HOH 140 579 579 HOH HOH A . K 9 HOH 141 580 580 HOH HOH A . K 9 HOH 142 581 581 HOH HOH A . K 9 HOH 143 582 582 HOH HOH A . K 9 HOH 144 583 583 HOH HOH A . K 9 HOH 145 584 584 HOH HOH A . K 9 HOH 146 585 585 HOH HOH A . K 9 HOH 147 586 586 HOH HOH A . K 9 HOH 148 587 587 HOH HOH A . K 9 HOH 149 588 588 HOH HOH A . K 9 HOH 150 589 589 HOH HOH A . K 9 HOH 151 590 590 HOH HOH A . K 9 HOH 152 591 591 HOH HOH A . K 9 HOH 153 592 592 HOH HOH A . K 9 HOH 154 593 593 HOH HOH A . K 9 HOH 155 594 594 HOH HOH A . K 9 HOH 156 595 595 HOH HOH A . K 9 HOH 157 596 596 HOH HOH A . K 9 HOH 158 597 597 HOH HOH A . K 9 HOH 159 598 598 HOH HOH A . K 9 HOH 160 599 599 HOH HOH A . K 9 HOH 161 600 600 HOH HOH A . K 9 HOH 162 601 601 HOH HOH A . K 9 HOH 163 602 602 HOH HOH A . K 9 HOH 164 603 603 HOH HOH A . K 9 HOH 165 604 604 HOH HOH A . K 9 HOH 166 605 605 HOH HOH A . K 9 HOH 167 606 606 HOH HOH A . K 9 HOH 168 607 607 HOH HOH A . K 9 HOH 169 608 608 HOH HOH A . K 9 HOH 170 609 609 HOH HOH A . K 9 HOH 171 610 610 HOH HOH A . K 9 HOH 172 611 611 HOH HOH A . K 9 HOH 173 612 612 HOH HOH A . K 9 HOH 174 613 613 HOH HOH A . K 9 HOH 175 614 614 HOH HOH A . K 9 HOH 176 615 615 HOH HOH A . K 9 HOH 177 616 616 HOH HOH A . K 9 HOH 178 617 617 HOH HOH A . K 9 HOH 179 618 618 HOH HOH A . K 9 HOH 180 619 619 HOH HOH A . K 9 HOH 181 620 620 HOH HOH A . K 9 HOH 182 621 621 HOH HOH A . K 9 HOH 183 622 622 HOH HOH A . K 9 HOH 184 623 623 HOH HOH A . K 9 HOH 185 624 624 HOH HOH A . K 9 HOH 186 625 625 HOH HOH A . K 9 HOH 187 626 626 HOH HOH A . K 9 HOH 188 627 627 HOH HOH A . K 9 HOH 189 628 628 HOH HOH A . K 9 HOH 190 629 629 HOH HOH A . K 9 HOH 191 630 630 HOH HOH A . K 9 HOH 192 631 631 HOH HOH A . K 9 HOH 193 632 632 HOH HOH A . K 9 HOH 194 633 633 HOH HOH A . K 9 HOH 195 634 634 HOH HOH A . K 9 HOH 196 635 635 HOH HOH A . K 9 HOH 197 636 636 HOH HOH A . K 9 HOH 198 637 637 HOH HOH A . K 9 HOH 199 638 638 HOH HOH A . K 9 HOH 200 639 639 HOH HOH A . K 9 HOH 201 640 640 HOH HOH A . K 9 HOH 202 641 641 HOH HOH A . K 9 HOH 203 642 642 HOH HOH A . K 9 HOH 204 643 643 HOH HOH A . K 9 HOH 205 644 644 HOH HOH A . K 9 HOH 206 645 645 HOH HOH A . K 9 HOH 207 646 646 HOH HOH A . K 9 HOH 208 647 647 HOH HOH A . K 9 HOH 209 648 648 HOH HOH A . K 9 HOH 210 649 649 HOH HOH A . K 9 HOH 211 650 650 HOH HOH A . K 9 HOH 212 651 651 HOH HOH A . K 9 HOH 213 652 652 HOH HOH A . K 9 HOH 214 653 653 HOH HOH A . K 9 HOH 215 654 654 HOH HOH A . K 9 HOH 216 655 655 HOH HOH A . K 9 HOH 217 656 656 HOH HOH A . K 9 HOH 218 657 657 HOH HOH A . K 9 HOH 219 658 658 HOH HOH A . K 9 HOH 220 659 659 HOH HOH A . K 9 HOH 221 660 660 HOH HOH A . L 9 HOH 1 8 8 HOH HOH B . L 9 HOH 2 9 9 HOH HOH B . L 9 HOH 3 13 13 HOH HOH B . L 9 HOH 4 17 17 HOH HOH B . L 9 HOH 5 21 21 HOH HOH B . L 9 HOH 6 27 27 HOH HOH B . L 9 HOH 7 42 42 HOH HOH B . L 9 HOH 8 46 46 HOH HOH B . L 9 HOH 9 54 54 HOH HOH B . L 9 HOH 10 57 57 HOH HOH B . L 9 HOH 11 69 69 HOH HOH B . L 9 HOH 12 83 83 HOH HOH B . L 9 HOH 13 92 92 HOH HOH B . L 9 HOH 14 99 99 HOH HOH B . L 9 HOH 15 105 105 HOH HOH B . L 9 HOH 16 110 110 HOH HOH B . L 9 HOH 17 114 114 HOH HOH B . L 9 HOH 18 141 141 HOH HOH B . L 9 HOH 19 153 153 HOH HOH B . L 9 HOH 20 157 157 HOH HOH B . L 9 HOH 21 160 160 HOH HOH B . L 9 HOH 22 211 211 HOH HOH B . L 9 HOH 23 212 212 HOH HOH B . L 9 HOH 24 252 252 HOH HOH B . L 9 HOH 25 516 516 HOH HOH B . L 9 HOH 26 556 556 HOH HOH B . L 9 HOH 27 557 557 HOH HOH B . L 9 HOH 28 558 558 HOH HOH B . L 9 HOH 29 559 559 HOH HOH B . L 9 HOH 30 560 560 HOH HOH B . L 9 HOH 31 562 562 HOH HOH B . L 9 HOH 32 604 604 HOH HOH B . L 9 HOH 33 626 626 HOH HOH B . L 9 HOH 34 627 627 HOH HOH B . M 9 HOH 1 12 12 HOH HOH C . M 9 HOH 2 18 18 HOH HOH C . M 9 HOH 3 19 19 HOH HOH C . M 9 HOH 4 22 22 HOH HOH C . M 9 HOH 5 24 24 HOH HOH C . M 9 HOH 6 34 34 HOH HOH C . M 9 HOH 7 37 37 HOH HOH C . M 9 HOH 8 38 38 HOH HOH C . M 9 HOH 9 66 66 HOH HOH C . M 9 HOH 10 68 68 HOH HOH C . M 9 HOH 11 78 78 HOH HOH C . M 9 HOH 12 85 85 HOH HOH C . M 9 HOH 13 107 107 HOH HOH C . M 9 HOH 14 125 125 HOH HOH C . M 9 HOH 15 135 135 HOH HOH C . M 9 HOH 16 137 137 HOH HOH C . M 9 HOH 17 138 138 HOH HOH C . M 9 HOH 18 139 139 HOH HOH C . M 9 HOH 19 143 143 HOH HOH C . M 9 HOH 20 146 146 HOH HOH C . M 9 HOH 21 148 148 HOH HOH C . M 9 HOH 22 159 159 HOH HOH C . M 9 HOH 23 163 163 HOH HOH C . M 9 HOH 24 204 204 HOH HOH C . M 9 HOH 25 205 205 HOH HOH C . M 9 HOH 26 224 224 HOH HOH C . M 9 HOH 27 225 225 HOH HOH C . M 9 HOH 28 226 226 HOH HOH C . M 9 HOH 29 227 227 HOH HOH C . M 9 HOH 30 242 242 HOH HOH C . M 9 HOH 31 254 254 HOH HOH C . M 9 HOH 32 255 255 HOH HOH C . M 9 HOH 33 256 256 HOH HOH C . M 9 HOH 34 257 257 HOH HOH C . M 9 HOH 35 540 540 HOH HOH C . M 9 HOH 36 543 543 HOH HOH C . M 9 HOH 37 544 544 HOH HOH C . M 9 HOH 38 545 545 HOH HOH C . M 9 HOH 39 546 546 HOH HOH C . M 9 HOH 40 547 547 HOH HOH C . M 9 HOH 41 548 548 HOH HOH C . M 9 HOH 42 563 563 HOH HOH C . M 9 HOH 43 564 564 HOH HOH C . M 9 HOH 44 629 629 HOH HOH C . N 9 HOH 1 117 117 HOH HOH D . N 9 HOH 2 123 123 HOH HOH D . N 9 HOH 3 133 133 HOH HOH D . N 9 HOH 4 136 136 HOH HOH D . N 9 HOH 5 158 158 HOH HOH D . N 9 HOH 6 161 161 HOH HOH D . N 9 HOH 7 505 505 HOH HOH D . N 9 HOH 8 507 507 HOH HOH D . N 9 HOH 9 508 508 HOH HOH D . N 9 HOH 10 628 628 HOH HOH D . N 9 HOH 11 631 631 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 291 ? CG ? A LYS 50 CG 2 1 Y 1 A LYS 291 ? CD ? A LYS 50 CD 3 1 Y 1 A LYS 291 ? CE ? A LYS 50 CE 4 1 Y 1 A LYS 291 ? NZ ? A LYS 50 NZ 5 1 Y 1 A GLN 297 ? CG ? A GLN 56 CG 6 1 Y 1 A GLN 297 ? CD ? A GLN 56 CD 7 1 Y 1 A GLN 297 ? OE1 ? A GLN 56 OE1 8 1 Y 1 A GLN 297 ? NE2 ? A GLN 56 NE2 9 1 Y 1 A LYS 307 ? CG ? A LYS 66 CG 10 1 Y 1 A LYS 307 ? CD ? A LYS 66 CD 11 1 Y 1 A LYS 307 ? CE ? A LYS 66 CE 12 1 Y 1 A LYS 307 ? NZ ? A LYS 66 NZ 13 1 Y 1 A ARG 323 ? CG ? A ARG 82 CG 14 1 Y 1 A ARG 323 ? CD ? A ARG 82 CD 15 1 Y 1 A ARG 323 ? NE ? A ARG 82 NE 16 1 Y 1 A ARG 323 ? CZ ? A ARG 82 CZ 17 1 Y 1 A ARG 323 ? NH1 ? A ARG 82 NH1 18 1 Y 1 A ARG 323 ? NH2 ? A ARG 82 NH2 19 1 Y 1 A ARG 438 ? CG ? A ARG 197 CG 20 1 Y 1 A ARG 438 ? CD ? A ARG 197 CD 21 1 Y 1 A ARG 438 ? NE ? A ARG 197 NE 22 1 Y 1 A ARG 438 ? CZ ? A ARG 197 CZ 23 1 Y 1 A ARG 438 ? NH1 ? A ARG 197 NH1 24 1 Y 1 A ARG 438 ? NH2 ? A ARG 197 NH2 25 1 Y 1 A ARG 441 ? CG ? A ARG 200 CG 26 1 Y 1 A ARG 441 ? CD ? A ARG 200 CD 27 1 Y 1 A ARG 441 ? NE ? A ARG 200 NE 28 1 Y 1 A ARG 441 ? CZ ? A ARG 200 CZ 29 1 Y 1 A ARG 441 ? NH1 ? A ARG 200 NH1 30 1 Y 1 A ARG 441 ? NH2 ? A ARG 200 NH2 31 1 Y 1 A ARG 538 ? CG ? A ARG 292 CG 32 1 Y 1 A ARG 538 ? CD ? A ARG 292 CD 33 1 Y 1 A ARG 538 ? NE ? A ARG 292 NE 34 1 Y 1 A ARG 538 ? CZ ? A ARG 292 CZ 35 1 Y 1 A ARG 538 ? NH1 ? A ARG 292 NH1 36 1 Y 1 A ARG 538 ? NH2 ? A ARG 292 NH2 37 1 Y 1 A VAL 545 ? CG1 ? A VAL 299 CG1 38 1 Y 1 A VAL 545 ? CG2 ? A VAL 299 CG2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 MOLREP phasing . ? 2 CNS refinement 1.1 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3PNC _cell.length_a 56.161 _cell.length_b 62.254 _cell.length_c 139.834 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PNC _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 3PNC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.84 _exptl_crystal.density_percent_sol 56.64 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2M formate, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 92' _diffrn_detector.pdbx_collection_date 2008-11-19 _diffrn_detector.details VARIMAX-HF # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator MIRRORS _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3PNC _reflns.observed_criterion_sigma_I 320923.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.000 _reflns.number_obs 33148 _reflns.number_all ? _reflns.percent_possible_obs 97.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.08200 _reflns.pdbx_netI_over_sigmaI 9.5000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.700 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 87.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.53000 _reflns_shell.meanI_over_sigI_obs 2.500 _reflns_shell.pdbx_redundancy 5.70 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3PNC _refine.ls_number_reflns_obs 30630 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF 360562.350 _refine.pdbx_data_cutoff_low_absF 0.0000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.44 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 90.4 _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.236 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1526 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.36 _refine.solvent_model_param_bsol 52.31 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3PNC _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.28 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.29 _refine_analyze.Luzzati_sigma_a_free 0.31 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2452 _refine_hist.pdbx_number_atoms_nucleic_acid 421 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 310 _refine_hist.number_atoms_total 3226 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 22.44 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.30 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.60 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.94 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.13 _refine_ls_shell.number_reflns_R_work 4312 _refine_ls_shell.R_factor_R_work 0.3140 _refine_ls_shell.percent_reflns_obs 82.30 _refine_ls_shell.R_factor_R_free 0.3280 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 5.20 _refine_ls_shell.number_reflns_R_free 235 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file ALL.PAR _pdbx_xplor_file.topol_file ALL.TOP # _database_PDB_matrix.entry_id 3PNC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3PNC _struct.title ;Ternary crystal structure of a polymerase lambda variant with a GT mispair at the primer terminus and sodium at catalytic metal site ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PNC _struct_keywords.pdbx_keywords LYASE,TRANSFERASE/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, LYASE, TRANSFERASE, DNA, TRANSFERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 8 ? J N N 7 ? K N N 9 ? L N N 9 ? M N N 9 ? N N N 9 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLL_HUMAN Q9UGP5 1 ;AQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGH LRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQK AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLPG PGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFR LLGLPYREPAERDW ; 242 ? 2 PDB 3PNC 3PNC 2 CAGTAG ? ? 3 PDB 3PNC 3PNC 3 CGGCCTTACTG ? ? 4 PDB 3PNC 3PNC 4 GCCG ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PNC A 1 ? 329 ? Q9UGP5 242 ? 575 ? 242 575 2 2 3PNC B 1 ? 6 ? 3PNC 1 ? 6 ? 1 6 3 3 3PNC C 1 ? 11 ? 3PNC 1 ? 11 ? 1 11 4 4 3PNC D 1 ? 4 ? 3PNC 1 ? 4 ? 1 4 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3PNC LYS A 222 ? UNP Q9UGP5 SER 463 'SEE REMARK 999' 463 1 1 3PNC GLY A 223 ? UNP Q9UGP5 GLN 464 'SEE REMARK 999' 464 2 1 3PNC ? A ? ? UNP Q9UGP5 GLU 465 'SEE REMARK 999' ? 3 1 3PNC ? A ? ? UNP Q9UGP5 GLU 466 'SEE REMARK 999' ? 4 1 3PNC ? A ? ? UNP Q9UGP5 ASN 467 'SEE REMARK 999' ? 5 1 3PNC ? A ? ? UNP Q9UGP5 GLY 468 'SEE REMARK 999' ? 6 1 3PNC ? A ? ? UNP Q9UGP5 GLN 469 'SEE REMARK 999' ? 7 1 3PNC GLU A 224 ? UNP Q9UGP5 GLN 470 'SEE REMARK 999' 470 8 1 3PNC THR A 225 ? UNP Q9UGP5 GLN 471 'SEE REMARK 999' 471 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5040 ? 1 MORE -64 ? 1 'SSA (A^2)' 16960 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 12 ? GLY A 30 ? ASN A 253 GLY A 271 1 ? 19 HELX_P HELX_P2 2 ASP A 31 ? SER A 47 ? ASP A 272 SER A 288 1 ? 17 HELX_P HELX_P3 3 SER A 54 ? ILE A 61 ? SER A 295 ILE A 302 1 ? 8 HELX_P HELX_P4 4 GLY A 65 ? GLY A 79 ? GLY A 306 GLY A 320 1 ? 15 HELX_P HELX_P5 5 LEU A 81 ? ILE A 87 ? LEU A 322 ILE A 328 5 ? 7 HELX_P HELX_P6 6 SER A 90 ? ASN A 99 ? SER A 331 ASN A 340 1 ? 10 HELX_P HELX_P7 7 GLY A 104 ? GLN A 114 ? GLY A 345 GLN A 355 1 ? 11 HELX_P HELX_P8 8 SER A 118 ? ALA A 126 ? SER A 359 ALA A 367 1 ? 9 HELX_P HELX_P9 9 THR A 129 ? HIS A 138 ? THR A 370 HIS A 379 1 ? 10 HELX_P HELX_P10 10 HIS A 138 ? GLU A 144 ? HIS A 379 GLU A 385 1 ? 7 HELX_P HELX_P11 11 ARG A 148 ? ALA A 164 ? ARG A 389 ALA A 405 1 ? 17 HELX_P HELX_P12 12 CYS A 174 ? ARG A 179 ? CYS A 415 ARG A 420 1 ? 6 HELX_P HELX_P13 13 ILE A 202 ? GLU A 213 ? ILE A 443 GLU A 454 1 ? 12 HELX_P HELX_P14 14 PRO A 249 ? SER A 251 ? PRO A 495 SER A 497 5 ? 3 HELX_P HELX_P15 15 GLU A 252 ? GLY A 262 ? GLU A 498 GLY A 508 1 ? 11 HELX_P HELX_P16 16 SER A 263 ? LYS A 277 ? SER A 509 LYS A 523 1 ? 15 HELX_P HELX_P17 17 THR A 309 ? LEU A 317 ? THR A 555 LEU A 563 1 ? 9 HELX_P HELX_P18 18 GLU A 323 ? ARG A 327 ? GLU A 569 ARG A 573 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E 1GC . O2A ? ? ? 1_555 G NA . NA ? ? A 1GC 1 A NA 2 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc2 metalc ? ? E 1GC . O2B ? ? ? 1_555 F MG . MG ? ? A 1GC 1 A MG 576 1_555 ? ? ? ? ? ? ? 1.963 ? ? metalc3 metalc ? ? E 1GC . O2A ? ? ? 1_555 F MG . MG ? ? A 1GC 1 A MG 576 1_555 ? ? ? ? ? ? ? 2.074 ? ? metalc4 metalc ? ? E 1GC . O1G ? ? ? 1_555 F MG . MG ? ? A 1GC 1 A MG 576 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc5 metalc ? ? E 1GC . O6 ? ? ? 1_555 J NA . NA ? ? A 1GC 1 B NA 7 1_555 ? ? ? ? ? ? ? 2.849 ? ? metalc6 metalc ? ? G NA . NA ? ? ? 1_555 A ASP 186 OD1 ? ? A NA 2 A ASP 427 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc7 metalc ? ? G NA . NA ? ? ? 1_555 A ASP 186 OD2 ? ? A NA 2 A ASP 427 1_555 ? ? ? ? ? ? ? 3.030 ? ? metalc8 metalc ? ? G NA . NA ? ? ? 1_555 A ASP 188 OD2 ? ? A NA 2 A ASP 429 1_555 ? ? ? ? ? ? ? 2.161 ? ? metalc9 metalc ? ? G NA . NA ? ? ? 1_555 A ASP 244 OD2 ? ? A NA 2 A ASP 490 1_555 ? ? ? ? ? ? ? 2.367 ? ? metalc10 metalc ? ? K HOH . O ? ? ? 1_555 H NA . NA ? ? A HOH 3 A NA 5 1_555 ? ? ? ? ? ? ? 2.342 ? ? metalc11 metalc ? ? H NA . NA ? ? ? 1_555 A SER 98 O ? ? A NA 5 A SER 339 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc12 metalc ? ? H NA . NA ? ? ? 1_555 A ILE 100 O ? ? A NA 5 A ILE 341 1_555 ? ? ? ? ? ? ? 2.475 ? ? metalc13 metalc ? ? H NA . NA ? ? ? 1_555 A ALA 103 O ? ? A NA 5 A ALA 344 1_555 ? ? ? ? ? ? ? 2.340 ? ? metalc14 metalc ? ? H NA . NA ? ? ? 1_555 B DA 5 OP1 ? ? A NA 5 B DA 5 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc15 metalc ? ? H NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 5 B HOH 8 1_555 ? ? ? ? ? ? ? 2.647 ? ? metalc16 metalc ? ? K HOH . O ? ? ? 1_555 J NA . NA ? ? A HOH 44 B NA 7 1_555 ? ? ? ? ? ? ? 2.867 ? ? metalc17 metalc ? ? K HOH . O ? ? ? 1_555 J NA . NA ? ? A HOH 64 B NA 7 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc18 metalc ? ? A ASP 186 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 427 A MG 576 1_555 ? ? ? ? ? ? ? 2.048 ? ? metalc19 metalc ? ? A ASP 188 OD1 ? ? ? 1_555 F MG . MG ? ? A ASP 429 A MG 576 1_555 ? ? ? ? ? ? ? 2.118 ? ? metalc20 metalc ? ? F MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 576 A HOH 578 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc21 metalc ? ? J NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 7 B HOH 42 1_555 ? ? ? ? ? ? ? 2.386 ? ? metalc22 metalc ? ? J NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 7 B HOH 54 1_555 ? ? ? ? ? ? ? 2.430 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 11 N1 ? ? B DC 1 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 11 O6 ? ? B DC 1 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 11 N2 ? ? B DC 1 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 10 N3 ? ? B DA 2 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 10 O4 ? ? B DA 2 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 3 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 3 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 3 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 8 N1 ? ? B DT 4 C DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 8 N6 ? ? B DT 4 C DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 5 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 7 O4 ? ? B DA 5 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DT 6 O2 ? ? B DG 6 C DT 6 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DT 6 N3 ? ? B DG 6 C DT 6 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog15 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 4 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 4 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 4 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2A ? E 1GC . ? A 1GC 1 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 96.2 ? 2 O2A ? E 1GC . ? A 1GC 1 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 69.8 ? 3 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 46.3 ? 4 O2A ? E 1GC . ? A 1GC 1 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 92.0 ? 5 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 118.8 ? 6 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 81.7 ? 7 O2A ? E 1GC . ? A 1GC 1 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 153.5 ? 8 OD1 ? A ASP 186 ? A ASP 427 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 103.5 ? 9 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 136.6 ? 10 OD2 ? A ASP 188 ? A ASP 429 ? 1_555 NA ? G NA . ? A NA 2 ? 1_555 OD2 ? A ASP 244 ? A ASP 490 ? 1_555 93.9 ? 11 O2B ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 O2A ? E 1GC . ? A 1GC 1 ? 1_555 87.7 ? 12 O2B ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 O1G ? E 1GC . ? A 1GC 1 ? 1_555 79.6 ? 13 O2A ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 O1G ? E 1GC . ? A 1GC 1 ? 1_555 93.4 ? 14 O2B ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 168.5 ? 15 O2A ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 96.5 ? 16 O1G ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 89.4 ? 17 O2B ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 93.8 ? 18 O2A ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 92.0 ? 19 O1G ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 171.3 ? 20 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 96.7 ? 21 O2B ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 O ? K HOH . ? A HOH 578 ? 1_555 89.2 ? 22 O2A ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 O ? K HOH . ? A HOH 578 ? 1_555 176.3 ? 23 O1G ? E 1GC . ? A 1GC 1 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 O ? K HOH . ? A HOH 578 ? 1_555 88.0 ? 24 OD2 ? A ASP 186 ? A ASP 427 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 O ? K HOH . ? A HOH 578 ? 1_555 86.9 ? 25 OD1 ? A ASP 188 ? A ASP 429 ? 1_555 MG ? F MG . ? A MG 576 ? 1_555 O ? K HOH . ? A HOH 578 ? 1_555 86.2 ? 26 O6 ? E 1GC . ? A 1GC 1 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? K HOH . ? A HOH 44 ? 1_555 79.8 ? 27 O6 ? E 1GC . ? A 1GC 1 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? K HOH . ? A HOH 64 ? 1_555 66.3 ? 28 O ? K HOH . ? A HOH 44 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? K HOH . ? A HOH 64 ? 1_555 74.1 ? 29 O6 ? E 1GC . ? A 1GC 1 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? L HOH . ? B HOH 42 ? 1_555 149.3 ? 30 O ? K HOH . ? A HOH 44 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? L HOH . ? B HOH 42 ? 1_555 95.9 ? 31 O ? K HOH . ? A HOH 64 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? L HOH . ? B HOH 42 ? 1_555 83.2 ? 32 O6 ? E 1GC . ? A 1GC 1 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? L HOH . ? B HOH 54 ? 1_555 77.1 ? 33 O ? K HOH . ? A HOH 44 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? L HOH . ? B HOH 54 ? 1_555 156.5 ? 34 O ? K HOH . ? A HOH 64 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? L HOH . ? B HOH 54 ? 1_555 92.4 ? 35 O ? L HOH . ? B HOH 42 ? 1_555 NA ? J NA . ? B NA 7 ? 1_555 O ? L HOH . ? B HOH 54 ? 1_555 101.6 ? 36 O ? K HOH . ? A HOH 3 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? A SER 98 ? A SER 339 ? 1_555 87.4 ? 37 O ? K HOH . ? A HOH 3 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? A ILE 100 ? A ILE 341 ? 1_555 96.9 ? 38 O ? A SER 98 ? A SER 339 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? A ILE 100 ? A ILE 341 ? 1_555 97.2 ? 39 O ? K HOH . ? A HOH 3 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? A ALA 103 ? A ALA 344 ? 1_555 174.1 ? 40 O ? A SER 98 ? A SER 339 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? A ALA 103 ? A ALA 344 ? 1_555 89.4 ? 41 O ? A ILE 100 ? A ILE 341 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? A ALA 103 ? A ALA 344 ? 1_555 88.4 ? 42 O ? K HOH . ? A HOH 3 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 OP1 ? B DA 5 ? B DA 5 ? 1_555 89.9 ? 43 O ? A SER 98 ? A SER 339 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 OP1 ? B DA 5 ? B DA 5 ? 1_555 162.7 ? 44 O ? A ILE 100 ? A ILE 341 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 OP1 ? B DA 5 ? B DA 5 ? 1_555 100.1 ? 45 O ? A ALA 103 ? A ALA 344 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 OP1 ? B DA 5 ? B DA 5 ? 1_555 91.7 ? 46 O ? K HOH . ? A HOH 3 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? L HOH . ? B HOH 8 ? 1_555 85.8 ? 47 O ? A SER 98 ? A SER 339 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? L HOH . ? B HOH 8 ? 1_555 75.8 ? 48 O ? A ILE 100 ? A ILE 341 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? L HOH . ? B HOH 8 ? 1_555 172.4 ? 49 O ? A ALA 103 ? A ALA 344 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? L HOH . ? B HOH 8 ? 1_555 88.6 ? 50 OP1 ? B DA 5 ? B DA 5 ? 1_555 NA ? H NA . ? A NA 5 ? 1_555 O ? L HOH . ? B HOH 8 ? 1_555 87.0 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 262 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 508 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 263 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 509 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 146 ? PRO A 147 ? MET A 387 PRO A 388 A 2 THR A 183 ? CYS A 184 ? THR A 424 CYS A 425 B 1 LEU A 170 ? ALA A 173 ? LEU A 411 ALA A 414 B 2 VAL A 187 ? THR A 192 ? VAL A 428 THR A 433 B 3 ARG A 241 ? VAL A 247 ? ARG A 487 VAL A 493 B 4 LYS A 226 ? CYS A 231 ? LYS A 472 CYS A 477 B 5 LEU A 216 ? LYS A 222 ? LEU A 457 LYS A 463 C 1 MET A 279 ? LEU A 281 ? MET A 525 LEU A 527 C 2 LEU A 286 ? THR A 288 ? LEU A 532 THR A 534 C 3 ARG A 303 ? LEU A 305 ? ARG A 549 LEU A 551 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET A 146 ? N MET A 387 O CYS A 184 ? O CYS A 425 B 1 2 N VAL A 172 ? N VAL A 413 O LEU A 190 ? O LEU A 431 B 2 3 N VAL A 187 ? N VAL A 428 O ASP A 244 ? O ASP A 490 B 3 4 O ARG A 241 ? O ARG A 487 N CYS A 231 ? N CYS A 477 B 4 5 O LEU A 228 ? O LEU A 474 N LEU A 220 ? N LEU A 461 C 1 2 N SER A 280 ? N SER A 526 O SER A 287 ? O SER A 533 C 2 3 N THR A 288 ? N THR A 534 O ARG A 303 ? O ARG A 549 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 1GC 1 ? 26 'BINDING SITE FOR RESIDUE 1GC A 1' AC2 Software A MG 576 ? 5 'BINDING SITE FOR RESIDUE MG A 576' AC3 Software A NA 2 ? 7 'BINDING SITE FOR RESIDUE NA A 2' AC4 Software A NA 5 ? 6 'BINDING SITE FOR RESIDUE NA A 5' AC5 Software A TRS 577 ? 9 'BINDING SITE FOR RESIDUE TRS A 577' AC6 Software B NA 7 ? 6 'BINDING SITE FOR RESIDUE NA B 7' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 26 NA G . ? NA A 2 . ? 1_555 ? 2 AC1 26 HOH K . ? HOH A 9 . ? 1_555 ? 3 AC1 26 HOH K . ? HOH A 44 . ? 1_555 ? 4 AC1 26 HOH K . ? HOH A 64 . ? 1_555 ? 5 AC1 26 ARG A 145 ? ARG A 386 . ? 1_555 ? 6 AC1 26 GLY A 175 ? GLY A 416 . ? 1_555 ? 7 AC1 26 SER A 176 ? SER A 417 . ? 1_555 ? 8 AC1 26 ARG A 179 ? ARG A 420 . ? 1_555 ? 9 AC1 26 GLY A 185 ? GLY A 426 . ? 1_555 ? 10 AC1 26 ASP A 186 ? ASP A 427 . ? 1_555 ? 11 AC1 26 ASP A 188 ? ASP A 429 . ? 1_555 ? 12 AC1 26 TYR A 259 ? TYR A 505 . ? 1_555 ? 13 AC1 26 PHE A 260 ? PHE A 506 . ? 1_555 ? 14 AC1 26 THR A 261 ? THR A 507 . ? 1_555 ? 15 AC1 26 GLY A 262 ? GLY A 508 . ? 1_555 ? 16 AC1 26 ALA A 264 ? ALA A 510 . ? 1_555 ? 17 AC1 26 ASN A 267 ? ASN A 513 . ? 1_555 ? 18 AC1 26 ARG A 271 ? ARG A 517 . ? 1_555 ? 19 AC1 26 MG F . ? MG A 576 . ? 1_555 ? 20 AC1 26 TRS I . ? TRS A 577 . ? 1_555 ? 21 AC1 26 HOH K . ? HOH A 578 . ? 1_555 ? 22 AC1 26 HOH K . ? HOH A 605 . ? 1_555 ? 23 AC1 26 DG B 6 ? DG B 6 . ? 1_555 ? 24 AC1 26 NA J . ? NA B 7 . ? 1_555 ? 25 AC1 26 HOH L . ? HOH B 212 . ? 1_555 ? 26 AC1 26 DC C 5 ? DC C 5 . ? 1_555 ? 27 AC2 5 1GC E . ? 1GC A 1 . ? 1_555 ? 28 AC2 5 NA G . ? NA A 2 . ? 1_555 ? 29 AC2 5 ASP A 186 ? ASP A 427 . ? 1_555 ? 30 AC2 5 ASP A 188 ? ASP A 429 . ? 1_555 ? 31 AC2 5 HOH K . ? HOH A 578 . ? 1_555 ? 32 AC3 7 1GC E . ? 1GC A 1 . ? 1_555 ? 33 AC3 7 ASP A 186 ? ASP A 427 . ? 1_555 ? 34 AC3 7 ASP A 188 ? ASP A 429 . ? 1_555 ? 35 AC3 7 ASP A 244 ? ASP A 490 . ? 1_555 ? 36 AC3 7 MG F . ? MG A 576 . ? 1_555 ? 37 AC3 7 TRS I . ? TRS A 577 . ? 1_555 ? 38 AC3 7 DG B 6 ? DG B 6 . ? 1_555 ? 39 AC4 6 HOH K . ? HOH A 3 . ? 1_555 ? 40 AC4 6 SER A 98 ? SER A 339 . ? 1_555 ? 41 AC4 6 ILE A 100 ? ILE A 341 . ? 1_555 ? 42 AC4 6 ALA A 103 ? ALA A 344 . ? 1_555 ? 43 AC4 6 DA B 5 ? DA B 5 . ? 1_555 ? 44 AC4 6 HOH L . ? HOH B 8 . ? 1_555 ? 45 AC5 9 1GC E . ? 1GC A 1 . ? 1_555 ? 46 AC5 9 NA G . ? NA A 2 . ? 1_555 ? 47 AC5 9 TRP A 101 ? TRP A 342 . ? 1_555 ? 48 AC5 9 GLY A 185 ? GLY A 426 . ? 1_555 ? 49 AC5 9 ASP A 186 ? ASP A 427 . ? 1_555 ? 50 AC5 9 ARG A 242 ? ARG A 488 . ? 1_555 ? 51 AC5 9 HOH K . ? HOH A 604 . ? 1_555 ? 52 AC5 9 DG B 6 ? DG B 6 . ? 1_555 ? 53 AC5 9 HOH L . ? HOH B 212 . ? 1_555 ? 54 AC6 6 1GC E . ? 1GC A 1 . ? 1_555 ? 55 AC6 6 HOH K . ? HOH A 44 . ? 1_555 ? 56 AC6 6 HOH K . ? HOH A 64 . ? 1_555 ? 57 AC6 6 DG B 6 ? DG B 6 . ? 1_555 ? 58 AC6 6 HOH L . ? HOH B 42 . ? 1_555 ? 59 AC6 6 HOH L . ? HOH B 54 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 449 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 NE2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLN _pdbx_validate_close_contact.auth_seq_id_2 453 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.02 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A GLU 572 ? ? N A ARG 573 ? B 1.513 1.336 0.177 0.023 Y 2 1 C A TRP 575 ? B O A TRP 575 ? B 1.085 1.229 -0.144 0.019 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 TRP _pdbx_validate_rmsd_angle.auth_seq_id_1 575 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 B _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 TRP _pdbx_validate_rmsd_angle.auth_seq_id_2 575 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 B _pdbx_validate_rmsd_angle.auth_atom_id_3 O _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 TRP _pdbx_validate_rmsd_angle.auth_seq_id_3 575 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 B _pdbx_validate_rmsd_angle.angle_value 93.20 _pdbx_validate_rmsd_angle.angle_target_value 120.10 _pdbx_validate_rmsd_angle.angle_deviation -26.90 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 288 ? ? -73.73 21.55 2 1 THR A 294 ? ? -140.03 -10.88 3 1 CYS A 415 ? ? -104.53 -134.20 4 1 ARG A 438 ? ? -151.86 -30.70 5 1 ILE A 443 ? ? -136.54 -44.49 6 1 ALA A 531 ? ? 178.27 172.58 7 1 VAL A 545 ? ? -155.56 -27.04 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;Author states that polymerase lambda loop residues from 463 to 471 (SQEENGQQQ) are replaced by residues "KGET" ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 242 ? A ALA 1 2 1 Y 1 A GLN 243 ? A GLN 2 3 1 Y 1 A PRO 244 ? A PRO 3 4 1 Y 1 A SER 245 ? A SER 4 5 1 Y 1 A SER 246 ? A SER 5 6 1 Y 1 A GLN 247 ? A GLN 6 7 1 Y 1 A LYS 248 ? A LYS 7 8 1 Y 1 A ALA 249 ? A ALA 8 9 1 Y 1 A ASN 539 ? A ASN 293 10 1 Y 1 A THR 540 ? A THR 294 11 1 Y 1 A HIS 541 ? A HIS 295 12 1 Y 1 A GLY 542 ? A GLY 296 13 1 Y 1 A CYS 543 ? A CYS 297 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1GC N1 N N N 1 1GC C2 C N N 2 1GC N2 N N N 3 1GC N3 N N N 4 1GC C4 C Y N 5 1GC C5 C Y N 6 1GC C6 C N N 7 1GC O6 O N N 8 1GC N7 N Y N 9 1GC C8 C Y N 10 1GC N9 N Y N 11 1GC PA P N N 12 1GC PB P N N 13 1GC PG P N N 14 1GC "C1'" C N R 15 1GC O1A O N N 16 1GC O1B O N N 17 1GC O1G O N N 18 1GC "C2'" C N N 19 1GC O2A O N N 20 1GC O2B O N N 21 1GC O2G O N N 22 1GC "C3'" C N S 23 1GC "O3'" O N N 24 1GC C3A C N N 25 1GC O3B O N N 26 1GC O3G O N N 27 1GC "C4'" C N R 28 1GC "O4'" O N N 29 1GC "C5'" C N N 30 1GC "O5'" O N N 31 1GC HN1 H N N 32 1GC HN2 H N N 33 1GC HN2A H N N 34 1GC H8 H N N 35 1GC "H1'" H N N 36 1GC HO1A H N N 37 1GC HO1G H N N 38 1GC "H2'" H N N 39 1GC "H2'A" H N N 40 1GC HO2B H N N 41 1GC HO2G H N N 42 1GC "H3'" H N N 43 1GC "HO3'" H N N 44 1GC H3A H N N 45 1GC H3AA H N N 46 1GC "H4'" H N N 47 1GC "H5'" H N N 48 1GC "H5'A" H N N 49 ALA N N N N 50 ALA CA C N S 51 ALA C C N N 52 ALA O O N N 53 ALA CB C N N 54 ALA OXT O N N 55 ALA H H N N 56 ALA H2 H N N 57 ALA HA H N N 58 ALA HB1 H N N 59 ALA HB2 H N N 60 ALA HB3 H N N 61 ALA HXT H N N 62 ARG N N N N 63 ARG CA C N S 64 ARG C C N N 65 ARG O O N N 66 ARG CB C N N 67 ARG CG C N N 68 ARG CD C N N 69 ARG NE N N N 70 ARG CZ C N N 71 ARG NH1 N N N 72 ARG NH2 N N N 73 ARG OXT O N N 74 ARG H H N N 75 ARG H2 H N N 76 ARG HA H N N 77 ARG HB2 H N N 78 ARG HB3 H N N 79 ARG HG2 H N N 80 ARG HG3 H N N 81 ARG HD2 H N N 82 ARG HD3 H N N 83 ARG HE H N N 84 ARG HH11 H N N 85 ARG HH12 H N N 86 ARG HH21 H N N 87 ARG HH22 H N N 88 ARG HXT H N N 89 ASN N N N N 90 ASN CA C N S 91 ASN C C N N 92 ASN O O N N 93 ASN CB C N N 94 ASN CG C N N 95 ASN OD1 O N N 96 ASN ND2 N N N 97 ASN OXT O N N 98 ASN H H N N 99 ASN H2 H N N 100 ASN HA H N N 101 ASN HB2 H N N 102 ASN HB3 H N N 103 ASN HD21 H N N 104 ASN HD22 H N N 105 ASN HXT H N N 106 ASP N N N N 107 ASP CA C N S 108 ASP C C N N 109 ASP O O N N 110 ASP CB C N N 111 ASP CG C N N 112 ASP OD1 O N N 113 ASP OD2 O N N 114 ASP OXT O N N 115 ASP H H N N 116 ASP H2 H N N 117 ASP HA H N N 118 ASP HB2 H N N 119 ASP HB3 H N N 120 ASP HD2 H N N 121 ASP HXT H N N 122 CYS N N N N 123 CYS CA C N R 124 CYS C C N N 125 CYS O O N N 126 CYS CB C N N 127 CYS SG S N N 128 CYS OXT O N N 129 CYS H H N N 130 CYS H2 H N N 131 CYS HA H N N 132 CYS HB2 H N N 133 CYS HB3 H N N 134 CYS HG H N N 135 CYS HXT H N N 136 DA OP3 O N N 137 DA P P N N 138 DA OP1 O N N 139 DA OP2 O N N 140 DA "O5'" O N N 141 DA "C5'" C N N 142 DA "C4'" C N R 143 DA "O4'" O N N 144 DA "C3'" C N S 145 DA "O3'" O N N 146 DA "C2'" C N N 147 DA "C1'" C N R 148 DA N9 N Y N 149 DA C8 C Y N 150 DA N7 N Y N 151 DA C5 C Y N 152 DA C6 C Y N 153 DA N6 N N N 154 DA N1 N Y N 155 DA C2 C Y N 156 DA N3 N Y N 157 DA C4 C Y N 158 DA HOP3 H N N 159 DA HOP2 H N N 160 DA "H5'" H N N 161 DA "H5''" H N N 162 DA "H4'" H N N 163 DA "H3'" H N N 164 DA "HO3'" H N N 165 DA "H2'" H N N 166 DA "H2''" H N N 167 DA "H1'" H N N 168 DA H8 H N N 169 DA H61 H N N 170 DA H62 H N N 171 DA H2 H N N 172 DC OP3 O N N 173 DC P P N N 174 DC OP1 O N N 175 DC OP2 O N N 176 DC "O5'" O N N 177 DC "C5'" C N N 178 DC "C4'" C N R 179 DC "O4'" O N N 180 DC "C3'" C N S 181 DC "O3'" O N N 182 DC "C2'" C N N 183 DC "C1'" C N R 184 DC N1 N N N 185 DC C2 C N N 186 DC O2 O N N 187 DC N3 N N N 188 DC C4 C N N 189 DC N4 N N N 190 DC C5 C N N 191 DC C6 C N N 192 DC HOP3 H N N 193 DC HOP2 H N N 194 DC "H5'" H N N 195 DC "H5''" H N N 196 DC "H4'" H N N 197 DC "H3'" H N N 198 DC "HO3'" H N N 199 DC "H2'" H N N 200 DC "H2''" H N N 201 DC "H1'" H N N 202 DC H41 H N N 203 DC H42 H N N 204 DC H5 H N N 205 DC H6 H N N 206 DG OP3 O N N 207 DG P P N N 208 DG OP1 O N N 209 DG OP2 O N N 210 DG "O5'" O N N 211 DG "C5'" C N N 212 DG "C4'" C N R 213 DG "O4'" O N N 214 DG "C3'" C N S 215 DG "O3'" O N N 216 DG "C2'" C N N 217 DG "C1'" C N R 218 DG N9 N Y N 219 DG C8 C Y N 220 DG N7 N Y N 221 DG C5 C Y N 222 DG C6 C N N 223 DG O6 O N N 224 DG N1 N N N 225 DG C2 C N N 226 DG N2 N N N 227 DG N3 N N N 228 DG C4 C Y N 229 DG HOP3 H N N 230 DG HOP2 H N N 231 DG "H5'" H N N 232 DG "H5''" H N N 233 DG "H4'" H N N 234 DG "H3'" H N N 235 DG "HO3'" H N N 236 DG "H2'" H N N 237 DG "H2''" H N N 238 DG "H1'" H N N 239 DG H8 H N N 240 DG H1 H N N 241 DG H21 H N N 242 DG H22 H N N 243 DT OP3 O N N 244 DT P P N N 245 DT OP1 O N N 246 DT OP2 O N N 247 DT "O5'" O N N 248 DT "C5'" C N N 249 DT "C4'" C N R 250 DT "O4'" O N N 251 DT "C3'" C N S 252 DT "O3'" O N N 253 DT "C2'" C N N 254 DT "C1'" C N R 255 DT N1 N N N 256 DT C2 C N N 257 DT O2 O N N 258 DT N3 N N N 259 DT C4 C N N 260 DT O4 O N N 261 DT C5 C N N 262 DT C7 C N N 263 DT C6 C N N 264 DT HOP3 H N N 265 DT HOP2 H N N 266 DT "H5'" H N N 267 DT "H5''" H N N 268 DT "H4'" H N N 269 DT "H3'" H N N 270 DT "HO3'" H N N 271 DT "H2'" H N N 272 DT "H2''" H N N 273 DT "H1'" H N N 274 DT H3 H N N 275 DT H71 H N N 276 DT H72 H N N 277 DT H73 H N N 278 DT H6 H N N 279 GLN N N N N 280 GLN CA C N S 281 GLN C C N N 282 GLN O O N N 283 GLN CB C N N 284 GLN CG C N N 285 GLN CD C N N 286 GLN OE1 O N N 287 GLN NE2 N N N 288 GLN OXT O N N 289 GLN H H N N 290 GLN H2 H N N 291 GLN HA H N N 292 GLN HB2 H N N 293 GLN HB3 H N N 294 GLN HG2 H N N 295 GLN HG3 H N N 296 GLN HE21 H N N 297 GLN HE22 H N N 298 GLN HXT H N N 299 GLU N N N N 300 GLU CA C N S 301 GLU C C N N 302 GLU O O N N 303 GLU CB C N N 304 GLU CG C N N 305 GLU CD C N N 306 GLU OE1 O N N 307 GLU OE2 O N N 308 GLU OXT O N N 309 GLU H H N N 310 GLU H2 H N N 311 GLU HA H N N 312 GLU HB2 H N N 313 GLU HB3 H N N 314 GLU HG2 H N N 315 GLU HG3 H N N 316 GLU HE2 H N N 317 GLU HXT H N N 318 GLY N N N N 319 GLY CA C N N 320 GLY C C N N 321 GLY O O N N 322 GLY OXT O N N 323 GLY H H N N 324 GLY H2 H N N 325 GLY HA2 H N N 326 GLY HA3 H N N 327 GLY HXT H N N 328 HIS N N N N 329 HIS CA C N S 330 HIS C C N N 331 HIS O O N N 332 HIS CB C N N 333 HIS CG C Y N 334 HIS ND1 N Y N 335 HIS CD2 C Y N 336 HIS CE1 C Y N 337 HIS NE2 N Y N 338 HIS OXT O N N 339 HIS H H N N 340 HIS H2 H N N 341 HIS HA H N N 342 HIS HB2 H N N 343 HIS HB3 H N N 344 HIS HD1 H N N 345 HIS HD2 H N N 346 HIS HE1 H N N 347 HIS HE2 H N N 348 HIS HXT H N N 349 HOH O O N N 350 HOH H1 H N N 351 HOH H2 H N N 352 ILE N N N N 353 ILE CA C N S 354 ILE C C N N 355 ILE O O N N 356 ILE CB C N S 357 ILE CG1 C N N 358 ILE CG2 C N N 359 ILE CD1 C N N 360 ILE OXT O N N 361 ILE H H N N 362 ILE H2 H N N 363 ILE HA H N N 364 ILE HB H N N 365 ILE HG12 H N N 366 ILE HG13 H N N 367 ILE HG21 H N N 368 ILE HG22 H N N 369 ILE HG23 H N N 370 ILE HD11 H N N 371 ILE HD12 H N N 372 ILE HD13 H N N 373 ILE HXT H N N 374 LEU N N N N 375 LEU CA C N S 376 LEU C C N N 377 LEU O O N N 378 LEU CB C N N 379 LEU CG C N N 380 LEU CD1 C N N 381 LEU CD2 C N N 382 LEU OXT O N N 383 LEU H H N N 384 LEU H2 H N N 385 LEU HA H N N 386 LEU HB2 H N N 387 LEU HB3 H N N 388 LEU HG H N N 389 LEU HD11 H N N 390 LEU HD12 H N N 391 LEU HD13 H N N 392 LEU HD21 H N N 393 LEU HD22 H N N 394 LEU HD23 H N N 395 LEU HXT H N N 396 LYS N N N N 397 LYS CA C N S 398 LYS C C N N 399 LYS O O N N 400 LYS CB C N N 401 LYS CG C N N 402 LYS CD C N N 403 LYS CE C N N 404 LYS NZ N N N 405 LYS OXT O N N 406 LYS H H N N 407 LYS H2 H N N 408 LYS HA H N N 409 LYS HB2 H N N 410 LYS HB3 H N N 411 LYS HG2 H N N 412 LYS HG3 H N N 413 LYS HD2 H N N 414 LYS HD3 H N N 415 LYS HE2 H N N 416 LYS HE3 H N N 417 LYS HZ1 H N N 418 LYS HZ2 H N N 419 LYS HZ3 H N N 420 LYS HXT H N N 421 MET N N N N 422 MET CA C N S 423 MET C C N N 424 MET O O N N 425 MET CB C N N 426 MET CG C N N 427 MET SD S N N 428 MET CE C N N 429 MET OXT O N N 430 MET H H N N 431 MET H2 H N N 432 MET HA H N N 433 MET HB2 H N N 434 MET HB3 H N N 435 MET HG2 H N N 436 MET HG3 H N N 437 MET HE1 H N N 438 MET HE2 H N N 439 MET HE3 H N N 440 MET HXT H N N 441 MG MG MG N N 442 NA NA NA N N 443 PHE N N N N 444 PHE CA C N S 445 PHE C C N N 446 PHE O O N N 447 PHE CB C N N 448 PHE CG C Y N 449 PHE CD1 C Y N 450 PHE CD2 C Y N 451 PHE CE1 C Y N 452 PHE CE2 C Y N 453 PHE CZ C Y N 454 PHE OXT O N N 455 PHE H H N N 456 PHE H2 H N N 457 PHE HA H N N 458 PHE HB2 H N N 459 PHE HB3 H N N 460 PHE HD1 H N N 461 PHE HD2 H N N 462 PHE HE1 H N N 463 PHE HE2 H N N 464 PHE HZ H N N 465 PHE HXT H N N 466 PRO N N N N 467 PRO CA C N S 468 PRO C C N N 469 PRO O O N N 470 PRO CB C N N 471 PRO CG C N N 472 PRO CD C N N 473 PRO OXT O N N 474 PRO H H N N 475 PRO HA H N N 476 PRO HB2 H N N 477 PRO HB3 H N N 478 PRO HG2 H N N 479 PRO HG3 H N N 480 PRO HD2 H N N 481 PRO HD3 H N N 482 PRO HXT H N N 483 SER N N N N 484 SER CA C N S 485 SER C C N N 486 SER O O N N 487 SER CB C N N 488 SER OG O N N 489 SER OXT O N N 490 SER H H N N 491 SER H2 H N N 492 SER HA H N N 493 SER HB2 H N N 494 SER HB3 H N N 495 SER HG H N N 496 SER HXT H N N 497 THR N N N N 498 THR CA C N S 499 THR C C N N 500 THR O O N N 501 THR CB C N R 502 THR OG1 O N N 503 THR CG2 C N N 504 THR OXT O N N 505 THR H H N N 506 THR H2 H N N 507 THR HA H N N 508 THR HB H N N 509 THR HG1 H N N 510 THR HG21 H N N 511 THR HG22 H N N 512 THR HG23 H N N 513 THR HXT H N N 514 TRP N N N N 515 TRP CA C N S 516 TRP C C N N 517 TRP O O N N 518 TRP CB C N N 519 TRP CG C Y N 520 TRP CD1 C Y N 521 TRP CD2 C Y N 522 TRP NE1 N Y N 523 TRP CE2 C Y N 524 TRP CE3 C Y N 525 TRP CZ2 C Y N 526 TRP CZ3 C Y N 527 TRP CH2 C Y N 528 TRP OXT O N N 529 TRP H H N N 530 TRP H2 H N N 531 TRP HA H N N 532 TRP HB2 H N N 533 TRP HB3 H N N 534 TRP HD1 H N N 535 TRP HE1 H N N 536 TRP HE3 H N N 537 TRP HZ2 H N N 538 TRP HZ3 H N N 539 TRP HH2 H N N 540 TRP HXT H N N 541 TRS C C N N 542 TRS C1 C N N 543 TRS C2 C N N 544 TRS C3 C N N 545 TRS N N N N 546 TRS O1 O N N 547 TRS O2 O N N 548 TRS O3 O N N 549 TRS H11 H N N 550 TRS H12 H N N 551 TRS H21 H N N 552 TRS H22 H N N 553 TRS H31 H N N 554 TRS H32 H N N 555 TRS HN1 H N N 556 TRS HN2 H N N 557 TRS HN3 H N N 558 TRS HO1 H N N 559 TRS HO2 H N N 560 TRS HO3 H N N 561 TYR N N N N 562 TYR CA C N S 563 TYR C C N N 564 TYR O O N N 565 TYR CB C N N 566 TYR CG C Y N 567 TYR CD1 C Y N 568 TYR CD2 C Y N 569 TYR CE1 C Y N 570 TYR CE2 C Y N 571 TYR CZ C Y N 572 TYR OH O N N 573 TYR OXT O N N 574 TYR H H N N 575 TYR H2 H N N 576 TYR HA H N N 577 TYR HB2 H N N 578 TYR HB3 H N N 579 TYR HD1 H N N 580 TYR HD2 H N N 581 TYR HE1 H N N 582 TYR HE2 H N N 583 TYR HH H N N 584 TYR HXT H N N 585 VAL N N N N 586 VAL CA C N S 587 VAL C C N N 588 VAL O O N N 589 VAL CB C N N 590 VAL CG1 C N N 591 VAL CG2 C N N 592 VAL OXT O N N 593 VAL H H N N 594 VAL H2 H N N 595 VAL HA H N N 596 VAL HB H N N 597 VAL HG11 H N N 598 VAL HG12 H N N 599 VAL HG13 H N N 600 VAL HG21 H N N 601 VAL HG22 H N N 602 VAL HG23 H N N 603 VAL HXT H N N 604 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1GC C2 N1 sing N N 1 1GC N1 C6 sing N N 2 1GC N1 HN1 sing N N 3 1GC N2 C2 sing N N 4 1GC N3 C2 doub N N 5 1GC N2 HN2 sing N N 6 1GC N2 HN2A sing N N 7 1GC N3 C4 sing N N 8 1GC C4 N9 sing Y N 9 1GC C4 C5 doub Y N 10 1GC C5 C6 sing N N 11 1GC C5 N7 sing Y N 12 1GC C6 O6 doub N N 13 1GC C8 N7 doub Y N 14 1GC N9 C8 sing Y N 15 1GC C8 H8 sing N N 16 1GC "C1'" N9 sing N N 17 1GC "O5'" PA sing N N 18 1GC C3A PA sing N N 19 1GC PA O2A doub N N 20 1GC PA O1A sing N N 21 1GC O1B PB doub N N 22 1GC O2B PB sing N N 23 1GC PB O3B sing N N 24 1GC PB C3A sing N N 25 1GC O3B PG sing N N 26 1GC O3G PG doub N N 27 1GC PG O1G sing N N 28 1GC PG O2G sing N N 29 1GC "C2'" "C1'" sing N N 30 1GC "C1'" "O4'" sing N N 31 1GC "C1'" "H1'" sing N N 32 1GC O1A HO1A sing N N 33 1GC O1G HO1G sing N N 34 1GC "C2'" "C3'" sing N N 35 1GC "C2'" "H2'" sing N N 36 1GC "C2'" "H2'A" sing N N 37 1GC O2B HO2B sing N N 38 1GC O2G HO2G sing N N 39 1GC "O3'" "C3'" sing N N 40 1GC "C3'" "C4'" sing N N 41 1GC "C3'" "H3'" sing N N 42 1GC "O3'" "HO3'" sing N N 43 1GC C3A H3A sing N N 44 1GC C3A H3AA sing N N 45 1GC "C4'" "O4'" sing N N 46 1GC "C4'" "C5'" sing N N 47 1GC "C4'" "H4'" sing N N 48 1GC "C5'" "O5'" sing N N 49 1GC "C5'" "H5'" sing N N 50 1GC "C5'" "H5'A" sing N N 51 ALA N CA sing N N 52 ALA N H sing N N 53 ALA N H2 sing N N 54 ALA CA C sing N N 55 ALA CA CB sing N N 56 ALA CA HA sing N N 57 ALA C O doub N N 58 ALA C OXT sing N N 59 ALA CB HB1 sing N N 60 ALA CB HB2 sing N N 61 ALA CB HB3 sing N N 62 ALA OXT HXT sing N N 63 ARG N CA sing N N 64 ARG N H sing N N 65 ARG N H2 sing N N 66 ARG CA C sing N N 67 ARG CA CB sing N N 68 ARG CA HA sing N N 69 ARG C O doub N N 70 ARG C OXT sing N N 71 ARG CB CG sing N N 72 ARG CB HB2 sing N N 73 ARG CB HB3 sing N N 74 ARG CG CD sing N N 75 ARG CG HG2 sing N N 76 ARG CG HG3 sing N N 77 ARG CD NE sing N N 78 ARG CD HD2 sing N N 79 ARG CD HD3 sing N N 80 ARG NE CZ sing N N 81 ARG NE HE sing N N 82 ARG CZ NH1 sing N N 83 ARG CZ NH2 doub N N 84 ARG NH1 HH11 sing N N 85 ARG NH1 HH12 sing N N 86 ARG NH2 HH21 sing N N 87 ARG NH2 HH22 sing N N 88 ARG OXT HXT sing N N 89 ASN N CA sing N N 90 ASN N H sing N N 91 ASN N H2 sing N N 92 ASN CA C sing N N 93 ASN CA CB sing N N 94 ASN CA HA sing N N 95 ASN C O doub N N 96 ASN C OXT sing N N 97 ASN CB CG sing N N 98 ASN CB HB2 sing N N 99 ASN CB HB3 sing N N 100 ASN CG OD1 doub N N 101 ASN CG ND2 sing N N 102 ASN ND2 HD21 sing N N 103 ASN ND2 HD22 sing N N 104 ASN OXT HXT sing N N 105 ASP N CA sing N N 106 ASP N H sing N N 107 ASP N H2 sing N N 108 ASP CA C sing N N 109 ASP CA CB sing N N 110 ASP CA HA sing N N 111 ASP C O doub N N 112 ASP C OXT sing N N 113 ASP CB CG sing N N 114 ASP CB HB2 sing N N 115 ASP CB HB3 sing N N 116 ASP CG OD1 doub N N 117 ASP CG OD2 sing N N 118 ASP OD2 HD2 sing N N 119 ASP OXT HXT sing N N 120 CYS N CA sing N N 121 CYS N H sing N N 122 CYS N H2 sing N N 123 CYS CA C sing N N 124 CYS CA CB sing N N 125 CYS CA HA sing N N 126 CYS C O doub N N 127 CYS C OXT sing N N 128 CYS CB SG sing N N 129 CYS CB HB2 sing N N 130 CYS CB HB3 sing N N 131 CYS SG HG sing N N 132 CYS OXT HXT sing N N 133 DA OP3 P sing N N 134 DA OP3 HOP3 sing N N 135 DA P OP1 doub N N 136 DA P OP2 sing N N 137 DA P "O5'" sing N N 138 DA OP2 HOP2 sing N N 139 DA "O5'" "C5'" sing N N 140 DA "C5'" "C4'" sing N N 141 DA "C5'" "H5'" sing N N 142 DA "C5'" "H5''" sing N N 143 DA "C4'" "O4'" sing N N 144 DA "C4'" "C3'" sing N N 145 DA "C4'" "H4'" sing N N 146 DA "O4'" "C1'" sing N N 147 DA "C3'" "O3'" sing N N 148 DA "C3'" "C2'" sing N N 149 DA "C3'" "H3'" sing N N 150 DA "O3'" "HO3'" sing N N 151 DA "C2'" "C1'" sing N N 152 DA "C2'" "H2'" sing N N 153 DA "C2'" "H2''" sing N N 154 DA "C1'" N9 sing N N 155 DA "C1'" "H1'" sing N N 156 DA N9 C8 sing Y N 157 DA N9 C4 sing Y N 158 DA C8 N7 doub Y N 159 DA C8 H8 sing N N 160 DA N7 C5 sing Y N 161 DA C5 C6 sing Y N 162 DA C5 C4 doub Y N 163 DA C6 N6 sing N N 164 DA C6 N1 doub Y N 165 DA N6 H61 sing N N 166 DA N6 H62 sing N N 167 DA N1 C2 sing Y N 168 DA C2 N3 doub Y N 169 DA C2 H2 sing N N 170 DA N3 C4 sing Y N 171 DC OP3 P sing N N 172 DC OP3 HOP3 sing N N 173 DC P OP1 doub N N 174 DC P OP2 sing N N 175 DC P "O5'" sing N N 176 DC OP2 HOP2 sing N N 177 DC "O5'" "C5'" sing N N 178 DC "C5'" "C4'" sing N N 179 DC "C5'" "H5'" sing N N 180 DC "C5'" "H5''" sing N N 181 DC "C4'" "O4'" sing N N 182 DC "C4'" "C3'" sing N N 183 DC "C4'" "H4'" sing N N 184 DC "O4'" "C1'" sing N N 185 DC "C3'" "O3'" sing N N 186 DC "C3'" "C2'" sing N N 187 DC "C3'" "H3'" sing N N 188 DC "O3'" "HO3'" sing N N 189 DC "C2'" "C1'" sing N N 190 DC "C2'" "H2'" sing N N 191 DC "C2'" "H2''" sing N N 192 DC "C1'" N1 sing N N 193 DC "C1'" "H1'" sing N N 194 DC N1 C2 sing N N 195 DC N1 C6 sing N N 196 DC C2 O2 doub N N 197 DC C2 N3 sing N N 198 DC N3 C4 doub N N 199 DC C4 N4 sing N N 200 DC C4 C5 sing N N 201 DC N4 H41 sing N N 202 DC N4 H42 sing N N 203 DC C5 C6 doub N N 204 DC C5 H5 sing N N 205 DC C6 H6 sing N N 206 DG OP3 P sing N N 207 DG OP3 HOP3 sing N N 208 DG P OP1 doub N N 209 DG P OP2 sing N N 210 DG P "O5'" sing N N 211 DG OP2 HOP2 sing N N 212 DG "O5'" "C5'" sing N N 213 DG "C5'" "C4'" sing N N 214 DG "C5'" "H5'" sing N N 215 DG "C5'" "H5''" sing N N 216 DG "C4'" "O4'" sing N N 217 DG "C4'" "C3'" sing N N 218 DG "C4'" "H4'" sing N N 219 DG "O4'" "C1'" sing N N 220 DG "C3'" "O3'" sing N N 221 DG "C3'" "C2'" sing N N 222 DG "C3'" "H3'" sing N N 223 DG "O3'" "HO3'" sing N N 224 DG "C2'" "C1'" sing N N 225 DG "C2'" "H2'" sing N N 226 DG "C2'" "H2''" sing N N 227 DG "C1'" N9 sing N N 228 DG "C1'" "H1'" sing N N 229 DG N9 C8 sing Y N 230 DG N9 C4 sing Y N 231 DG C8 N7 doub Y N 232 DG C8 H8 sing N N 233 DG N7 C5 sing Y N 234 DG C5 C6 sing N N 235 DG C5 C4 doub Y N 236 DG C6 O6 doub N N 237 DG C6 N1 sing N N 238 DG N1 C2 sing N N 239 DG N1 H1 sing N N 240 DG C2 N2 sing N N 241 DG C2 N3 doub N N 242 DG N2 H21 sing N N 243 DG N2 H22 sing N N 244 DG N3 C4 sing N N 245 DT OP3 P sing N N 246 DT OP3 HOP3 sing N N 247 DT P OP1 doub N N 248 DT P OP2 sing N N 249 DT P "O5'" sing N N 250 DT OP2 HOP2 sing N N 251 DT "O5'" "C5'" sing N N 252 DT "C5'" "C4'" sing N N 253 DT "C5'" "H5'" sing N N 254 DT "C5'" "H5''" sing N N 255 DT "C4'" "O4'" sing N N 256 DT "C4'" "C3'" sing N N 257 DT "C4'" "H4'" sing N N 258 DT "O4'" "C1'" sing N N 259 DT "C3'" "O3'" sing N N 260 DT "C3'" "C2'" sing N N 261 DT "C3'" "H3'" sing N N 262 DT "O3'" "HO3'" sing N N 263 DT "C2'" "C1'" sing N N 264 DT "C2'" "H2'" sing N N 265 DT "C2'" "H2''" sing N N 266 DT "C1'" N1 sing N N 267 DT "C1'" "H1'" sing N N 268 DT N1 C2 sing N N 269 DT N1 C6 sing N N 270 DT C2 O2 doub N N 271 DT C2 N3 sing N N 272 DT N3 C4 sing N N 273 DT N3 H3 sing N N 274 DT C4 O4 doub N N 275 DT C4 C5 sing N N 276 DT C5 C7 sing N N 277 DT C5 C6 doub N N 278 DT C7 H71 sing N N 279 DT C7 H72 sing N N 280 DT C7 H73 sing N N 281 DT C6 H6 sing N N 282 GLN N CA sing N N 283 GLN N H sing N N 284 GLN N H2 sing N N 285 GLN CA C sing N N 286 GLN CA CB sing N N 287 GLN CA HA sing N N 288 GLN C O doub N N 289 GLN C OXT sing N N 290 GLN CB CG sing N N 291 GLN CB HB2 sing N N 292 GLN CB HB3 sing N N 293 GLN CG CD sing N N 294 GLN CG HG2 sing N N 295 GLN CG HG3 sing N N 296 GLN CD OE1 doub N N 297 GLN CD NE2 sing N N 298 GLN NE2 HE21 sing N N 299 GLN NE2 HE22 sing N N 300 GLN OXT HXT sing N N 301 GLU N CA sing N N 302 GLU N H sing N N 303 GLU N H2 sing N N 304 GLU CA C sing N N 305 GLU CA CB sing N N 306 GLU CA HA sing N N 307 GLU C O doub N N 308 GLU C OXT sing N N 309 GLU CB CG sing N N 310 GLU CB HB2 sing N N 311 GLU CB HB3 sing N N 312 GLU CG CD sing N N 313 GLU CG HG2 sing N N 314 GLU CG HG3 sing N N 315 GLU CD OE1 doub N N 316 GLU CD OE2 sing N N 317 GLU OE2 HE2 sing N N 318 GLU OXT HXT sing N N 319 GLY N CA sing N N 320 GLY N H sing N N 321 GLY N H2 sing N N 322 GLY CA C sing N N 323 GLY CA HA2 sing N N 324 GLY CA HA3 sing N N 325 GLY C O doub N N 326 GLY C OXT sing N N 327 GLY OXT HXT sing N N 328 HIS N CA sing N N 329 HIS N H sing N N 330 HIS N H2 sing N N 331 HIS CA C sing N N 332 HIS CA CB sing N N 333 HIS CA HA sing N N 334 HIS C O doub N N 335 HIS C OXT sing N N 336 HIS CB CG sing N N 337 HIS CB HB2 sing N N 338 HIS CB HB3 sing N N 339 HIS CG ND1 sing Y N 340 HIS CG CD2 doub Y N 341 HIS ND1 CE1 doub Y N 342 HIS ND1 HD1 sing N N 343 HIS CD2 NE2 sing Y N 344 HIS CD2 HD2 sing N N 345 HIS CE1 NE2 sing Y N 346 HIS CE1 HE1 sing N N 347 HIS NE2 HE2 sing N N 348 HIS OXT HXT sing N N 349 HOH O H1 sing N N 350 HOH O H2 sing N N 351 ILE N CA sing N N 352 ILE N H sing N N 353 ILE N H2 sing N N 354 ILE CA C sing N N 355 ILE CA CB sing N N 356 ILE CA HA sing N N 357 ILE C O doub N N 358 ILE C OXT sing N N 359 ILE CB CG1 sing N N 360 ILE CB CG2 sing N N 361 ILE CB HB sing N N 362 ILE CG1 CD1 sing N N 363 ILE CG1 HG12 sing N N 364 ILE CG1 HG13 sing N N 365 ILE CG2 HG21 sing N N 366 ILE CG2 HG22 sing N N 367 ILE CG2 HG23 sing N N 368 ILE CD1 HD11 sing N N 369 ILE CD1 HD12 sing N N 370 ILE CD1 HD13 sing N N 371 ILE OXT HXT sing N N 372 LEU N CA sing N N 373 LEU N H sing N N 374 LEU N H2 sing N N 375 LEU CA C sing N N 376 LEU CA CB sing N N 377 LEU CA HA sing N N 378 LEU C O doub N N 379 LEU C OXT sing N N 380 LEU CB CG sing N N 381 LEU CB HB2 sing N N 382 LEU CB HB3 sing N N 383 LEU CG CD1 sing N N 384 LEU CG CD2 sing N N 385 LEU CG HG sing N N 386 LEU CD1 HD11 sing N N 387 LEU CD1 HD12 sing N N 388 LEU CD1 HD13 sing N N 389 LEU CD2 HD21 sing N N 390 LEU CD2 HD22 sing N N 391 LEU CD2 HD23 sing N N 392 LEU OXT HXT sing N N 393 LYS N CA sing N N 394 LYS N H sing N N 395 LYS N H2 sing N N 396 LYS CA C sing N N 397 LYS CA CB sing N N 398 LYS CA HA sing N N 399 LYS C O doub N N 400 LYS C OXT sing N N 401 LYS CB CG sing N N 402 LYS CB HB2 sing N N 403 LYS CB HB3 sing N N 404 LYS CG CD sing N N 405 LYS CG HG2 sing N N 406 LYS CG HG3 sing N N 407 LYS CD CE sing N N 408 LYS CD HD2 sing N N 409 LYS CD HD3 sing N N 410 LYS CE NZ sing N N 411 LYS CE HE2 sing N N 412 LYS CE HE3 sing N N 413 LYS NZ HZ1 sing N N 414 LYS NZ HZ2 sing N N 415 LYS NZ HZ3 sing N N 416 LYS OXT HXT sing N N 417 MET N CA sing N N 418 MET N H sing N N 419 MET N H2 sing N N 420 MET CA C sing N N 421 MET CA CB sing N N 422 MET CA HA sing N N 423 MET C O doub N N 424 MET C OXT sing N N 425 MET CB CG sing N N 426 MET CB HB2 sing N N 427 MET CB HB3 sing N N 428 MET CG SD sing N N 429 MET CG HG2 sing N N 430 MET CG HG3 sing N N 431 MET SD CE sing N N 432 MET CE HE1 sing N N 433 MET CE HE2 sing N N 434 MET CE HE3 sing N N 435 MET OXT HXT sing N N 436 PHE N CA sing N N 437 PHE N H sing N N 438 PHE N H2 sing N N 439 PHE CA C sing N N 440 PHE CA CB sing N N 441 PHE CA HA sing N N 442 PHE C O doub N N 443 PHE C OXT sing N N 444 PHE CB CG sing N N 445 PHE CB HB2 sing N N 446 PHE CB HB3 sing N N 447 PHE CG CD1 doub Y N 448 PHE CG CD2 sing Y N 449 PHE CD1 CE1 sing Y N 450 PHE CD1 HD1 sing N N 451 PHE CD2 CE2 doub Y N 452 PHE CD2 HD2 sing N N 453 PHE CE1 CZ doub Y N 454 PHE CE1 HE1 sing N N 455 PHE CE2 CZ sing Y N 456 PHE CE2 HE2 sing N N 457 PHE CZ HZ sing N N 458 PHE OXT HXT sing N N 459 PRO N CA sing N N 460 PRO N CD sing N N 461 PRO N H sing N N 462 PRO CA C sing N N 463 PRO CA CB sing N N 464 PRO CA HA sing N N 465 PRO C O doub N N 466 PRO C OXT sing N N 467 PRO CB CG sing N N 468 PRO CB HB2 sing N N 469 PRO CB HB3 sing N N 470 PRO CG CD sing N N 471 PRO CG HG2 sing N N 472 PRO CG HG3 sing N N 473 PRO CD HD2 sing N N 474 PRO CD HD3 sing N N 475 PRO OXT HXT sing N N 476 SER N CA sing N N 477 SER N H sing N N 478 SER N H2 sing N N 479 SER CA C sing N N 480 SER CA CB sing N N 481 SER CA HA sing N N 482 SER C O doub N N 483 SER C OXT sing N N 484 SER CB OG sing N N 485 SER CB HB2 sing N N 486 SER CB HB3 sing N N 487 SER OG HG sing N N 488 SER OXT HXT sing N N 489 THR N CA sing N N 490 THR N H sing N N 491 THR N H2 sing N N 492 THR CA C sing N N 493 THR CA CB sing N N 494 THR CA HA sing N N 495 THR C O doub N N 496 THR C OXT sing N N 497 THR CB OG1 sing N N 498 THR CB CG2 sing N N 499 THR CB HB sing N N 500 THR OG1 HG1 sing N N 501 THR CG2 HG21 sing N N 502 THR CG2 HG22 sing N N 503 THR CG2 HG23 sing N N 504 THR OXT HXT sing N N 505 TRP N CA sing N N 506 TRP N H sing N N 507 TRP N H2 sing N N 508 TRP CA C sing N N 509 TRP CA CB sing N N 510 TRP CA HA sing N N 511 TRP C O doub N N 512 TRP C OXT sing N N 513 TRP CB CG sing N N 514 TRP CB HB2 sing N N 515 TRP CB HB3 sing N N 516 TRP CG CD1 doub Y N 517 TRP CG CD2 sing Y N 518 TRP CD1 NE1 sing Y N 519 TRP CD1 HD1 sing N N 520 TRP CD2 CE2 doub Y N 521 TRP CD2 CE3 sing Y N 522 TRP NE1 CE2 sing Y N 523 TRP NE1 HE1 sing N N 524 TRP CE2 CZ2 sing Y N 525 TRP CE3 CZ3 doub Y N 526 TRP CE3 HE3 sing N N 527 TRP CZ2 CH2 doub Y N 528 TRP CZ2 HZ2 sing N N 529 TRP CZ3 CH2 sing Y N 530 TRP CZ3 HZ3 sing N N 531 TRP CH2 HH2 sing N N 532 TRP OXT HXT sing N N 533 TRS C C1 sing N N 534 TRS C C2 sing N N 535 TRS C C3 sing N N 536 TRS C N sing N N 537 TRS C1 O1 sing N N 538 TRS C1 H11 sing N N 539 TRS C1 H12 sing N N 540 TRS C2 O2 sing N N 541 TRS C2 H21 sing N N 542 TRS C2 H22 sing N N 543 TRS C3 O3 sing N N 544 TRS C3 H31 sing N N 545 TRS C3 H32 sing N N 546 TRS N HN1 sing N N 547 TRS N HN2 sing N N 548 TRS N HN3 sing N N 549 TRS O1 HO1 sing N N 550 TRS O2 HO2 sing N N 551 TRS O3 HO3 sing N N 552 TYR N CA sing N N 553 TYR N H sing N N 554 TYR N H2 sing N N 555 TYR CA C sing N N 556 TYR CA CB sing N N 557 TYR CA HA sing N N 558 TYR C O doub N N 559 TYR C OXT sing N N 560 TYR CB CG sing N N 561 TYR CB HB2 sing N N 562 TYR CB HB3 sing N N 563 TYR CG CD1 doub Y N 564 TYR CG CD2 sing Y N 565 TYR CD1 CE1 sing Y N 566 TYR CD1 HD1 sing N N 567 TYR CD2 CE2 doub Y N 568 TYR CD2 HD2 sing N N 569 TYR CE1 CZ doub Y N 570 TYR CE1 HE1 sing N N 571 TYR CE2 CZ sing Y N 572 TYR CE2 HE2 sing N N 573 TYR CZ OH sing N N 574 TYR OH HH sing N N 575 TYR OXT HXT sing N N 576 VAL N CA sing N N 577 VAL N H sing N N 578 VAL N H2 sing N N 579 VAL CA C sing N N 580 VAL CA CB sing N N 581 VAL CA HA sing N N 582 VAL C O doub N N 583 VAL C OXT sing N N 584 VAL CB CG1 sing N N 585 VAL CB CG2 sing N N 586 VAL CB HB sing N N 587 VAL CG1 HG11 sing N N 588 VAL CG1 HG12 sing N N 589 VAL CG1 HG13 sing N N 590 VAL CG2 HG21 sing N N 591 VAL CG2 HG22 sing N N 592 VAL CG2 HG23 sing N N 593 VAL OXT HXT sing N N 594 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3PNC 'double helix' 3PNC 'b-form double helix' 3PNC 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 11 1_555 0.061 -0.193 0.448 -20.997 -15.633 -0.215 1 B_DC1:DG11_C B 1 ? C 11 ? 19 1 1 B DA 2 1_555 C DT 10 1_555 -0.024 -0.134 0.057 -5.235 -8.605 2.883 2 B_DA2:DT10_C B 2 ? C 10 ? 20 1 1 B DG 3 1_555 C DC 9 1_555 -0.294 -0.113 0.217 -0.702 -11.027 -2.178 3 B_DG3:DC9_C B 3 ? C 9 ? 19 1 1 B DT 4 1_555 C DA 8 1_555 -0.149 -0.184 -0.018 0.436 -7.656 0.320 4 B_DT4:DA8_C B 4 ? C 8 ? 20 1 1 B DA 5 1_555 C DT 7 1_555 0.017 -0.059 -0.114 -6.241 -10.182 1.233 5 B_DA5:DT7_C B 5 ? C 7 ? 20 1 1 B DG 6 1_555 C DT 6 1_555 -2.057 -0.419 0.248 6.364 -7.428 0.567 6 B_DG6:DT6_C B 6 ? C 6 ? 28 1 1 C DC 1 1_555 D DG 4 1_555 -0.185 -0.270 0.302 -14.240 -1.135 -5.017 7 C_DC1:DG4_D C 1 ? D 4 ? 19 1 1 C DG 2 1_555 D DC 3 1_555 -0.079 -0.250 -0.140 2.536 0.313 -2.235 8 C_DG2:DC3_D C 2 ? D 3 ? 19 1 1 C DG 3 1_555 D DC 2 1_555 -0.248 -0.164 0.071 8.130 -0.494 -1.023 9 C_DG3:DC2_D C 3 ? D 2 ? 19 1 1 C DC 4 1_555 D DG 1 1_555 0.446 -0.084 -0.045 14.132 -12.774 1.352 10 C_DC4:DG1_D C 4 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 11 1_555 B DA 2 1_555 C DT 10 1_555 -0.355 0.560 3.018 2.614 12.945 31.647 -0.997 0.997 2.976 22.548 -4.552 34.227 1 BB_DC1DA2:DT10DG11_CC B 1 ? C 11 ? B 2 ? C 10 ? 1 B DA 2 1_555 C DT 10 1_555 B DG 3 1_555 C DC 9 1_555 0.047 -0.411 3.163 -2.777 4.757 31.824 -1.547 -0.556 3.056 8.595 5.018 32.286 2 BB_DA2DG3:DC9DT10_CC B 2 ? C 10 ? B 3 ? C 9 ? 1 B DG 3 1_555 C DC 9 1_555 B DT 4 1_555 C DA 8 1_555 0.599 -0.514 3.252 3.105 3.399 32.056 -1.519 -0.529 3.224 6.115 -5.586 32.376 3 BB_DG3DT4:DA8DC9_CC B 3 ? C 9 ? B 4 ? C 8 ? 1 B DT 4 1_555 C DA 8 1_555 B DA 5 1_555 C DT 7 1_555 0.285 -0.675 3.468 1.055 6.228 30.113 -2.542 -0.323 3.273 11.824 -2.003 30.753 4 BB_DT4DA5:DT7DA8_CC B 4 ? C 8 ? B 5 ? C 7 ? 1 B DA 5 1_555 C DT 7 1_555 B DG 6 1_555 C DT 6 1_555 -0.360 -0.616 2.915 -3.700 5.691 24.493 -2.842 -0.117 2.728 13.096 8.513 25.403 5 BB_DA5DG6:DT6DT7_CC B 5 ? C 7 ? B 6 ? C 6 ? 1 C DC 1 1_555 D DG 4 1_555 C DG 2 1_555 D DC 3 1_555 0.873 0.154 2.986 4.709 3.889 30.897 -0.396 -0.785 3.078 7.212 -8.733 31.481 6 CC_DC1DG2:DC3DG4_DD C 1 ? D 4 ? C 2 ? D 3 ? 1 C DG 2 1_555 D DC 3 1_555 C DG 3 1_555 D DC 2 1_555 -0.616 -0.137 3.213 -3.864 0.070 35.826 -0.232 0.452 3.259 0.113 6.259 36.027 7 CC_DG2DG3:DC2DC3_DD C 2 ? D 3 ? C 3 ? D 2 ? 1 C DG 3 1_555 D DC 2 1_555 C DC 4 1_555 D DG 1 1_555 0.534 -1.076 3.198 -1.793 6.363 35.221 -2.614 -1.111 2.936 10.403 2.930 35.817 8 CC_DG3DC4:DG1DC2_DD C 3 ? D 2 ? C 4 ? D 1 ? # _atom_sites.entry_id 3PNC _atom_sites.fract_transf_matrix[1][1] 0.017806 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016063 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007151 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S # loop_