HEADER TRANSFERASE/TRANSFERASE INHIBITOR 23-NOV-10 3PP0 TITLE CRYSTAL STRUCTURE OF THE KINASE DOMAIN OF HUMAN HER2 (ERBB2). COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 706-1009; COMPND 5 SYNONYM: METASTATIC LYMPH NODE GENE 19 PROTEIN, MLN 19, PROTO- COMPND 6 ONCOGENE NEU, PROTO-ONCOGENE C-ERBB-2, TYROSINE KINASE-TYPE CELL COMPND 7 SURFACE RECEPTOR HER2, P185ERBB2; COMPND 8 EC: 2.7.10.1; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERBB2, HER2, MLN19, NEU, NGL; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7118; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1 KEYWDS KINASE DOMAIN, ANTI-ONCOGENE, ATP-BINDING, CELL CYCLE, DISEASE KEYWDS 2 MUTATION, GLYCOPROTEIN, MEMBRANE, NUCLEOTIDE-BINDING, KEYWDS 3 PHOSPHOPROTEIN, RECEPTOR, SECRETED, TRANSFERASE, TRANSMEMBRANE, KEYWDS 4 TYROSINE-PROTEIN KINASE, TYROSINE KINASE INHIBITOR, TRANSFERASE- KEYWDS 5 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.J.SKENE,K.AERTGEERTS,S.SOGABE REVDAT 4 06-SEP-23 3PP0 1 REMARK SEQADV REVDAT 3 08-NOV-17 3PP0 1 REMARK REVDAT 2 15-JUN-11 3PP0 1 JRNL REVDAT 1 30-MAR-11 3PP0 0 JRNL AUTH K.AERTGEERTS,R.SKENE,J.YANO,B.C.SANG,H.ZOU,G.SNELL, JRNL AUTH 2 A.JENNINGS,K.IWAMOTO,N.HABUKA,A.HIROKAWA,T.ISHIKAWA, JRNL AUTH 3 T.TANAKA,H.MIKI,Y.OHTA,S.SOGABE JRNL TITL STRUCTURAL ANALYSIS OF THE MECHANISM OF INHIBITION AND JRNL TITL 2 ALLOSTERIC ACTIVATION OF THE KINASE DOMAIN OF HER2 PROTEIN. JRNL REF J.BIOL.CHEM. V. 286 18756 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21454582 JRNL DOI 10.1074/JBC.M110.206193 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 27014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1438 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1893 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 104 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4657 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.38000 REMARK 3 B22 (A**2) : -0.50000 REMARK 3 B33 (A**2) : -2.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.255 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.193 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.529 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4837 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6553 ; 1.270 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 579 ; 5.949 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 208 ;38.178 ;22.981 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 869 ;16.610 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 45 ;17.091 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 728 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3598 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2907 ; 2.012 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4726 ; 3.360 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1930 ; 5.467 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1826 ; 7.862 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 706 A 1009 REMARK 3 RESIDUE RANGE : A 1 A 1 REMARK 3 ORIGIN FOR THE GROUP (A): 12.4799 21.6250 34.0645 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0129 REMARK 3 T33: 0.0445 T12: 0.0000 REMARK 3 T13: -0.0220 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.8172 L22: 1.1047 REMARK 3 L33: 3.2472 L12: -0.3151 REMARK 3 L13: -0.7549 L23: 0.2095 REMARK 3 S TENSOR REMARK 3 S11: 0.0255 S12: -0.0362 S13: -0.0746 REMARK 3 S21: -0.1536 S22: 0.0304 S23: 0.0280 REMARK 3 S31: -0.0897 S32: -0.0576 S33: -0.0559 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 706 B 1009 REMARK 3 RESIDUE RANGE : B 2 B 2 REMARK 3 ORIGIN FOR THE GROUP (A): 30.1008 40.4937 -4.0860 REMARK 3 T TENSOR REMARK 3 T11: 0.0388 T22: 0.0181 REMARK 3 T33: 0.0624 T12: 0.0026 REMARK 3 T13: 0.0069 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 1.0269 L22: 0.7641 REMARK 3 L33: 2.5967 L12: 0.0926 REMARK 3 L13: -0.3131 L23: -0.3915 REMARK 3 S TENSOR REMARK 3 S11: 0.0446 S12: 0.0178 S13: 0.0333 REMARK 3 S21: -0.0318 S22: 0.0039 S23: -0.0354 REMARK 3 S31: 0.0881 S32: 0.0031 S33: -0.0485 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3PP0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000062642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI (220) SINGLE MONO REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28773 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.55300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1M14 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3550, 200MM DI-AMMONIUM REMARK 280 TARTRATE, 100 MM PIPES, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.35250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.33750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.47550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.33750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.35250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.47550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 702 REMARK 465 SER A 703 REMARK 465 GLY A 704 REMARK 465 ALA A 705 REMARK 465 ASP A 880 REMARK 465 GLY A 881 REMARK 465 LEU A 994 REMARK 465 GLY A 995 REMARK 465 PRO A 996 REMARK 465 ALA A 997 REMARK 465 SER A 998 REMARK 465 PRO A 999 REMARK 465 LEU A 1000 REMARK 465 ASP A 1001 REMARK 465 SER A 1002 REMARK 465 THR A 1003 REMARK 465 PHE A 1004 REMARK 465 TYR A 1005 REMARK 465 ARG A 1006 REMARK 465 SER A 1007 REMARK 465 LEU A 1008 REMARK 465 LEU A 1009 REMARK 465 GLU A 1010 REMARK 465 ASP A 1011 REMARK 465 ASP A 1012 REMARK 465 ASP A 1013 REMARK 465 MET A 1014 REMARK 465 GLY A 1015 REMARK 465 ASP A 1016 REMARK 465 LEU A 1017 REMARK 465 VAL A 1018 REMARK 465 ASP A 1019 REMARK 465 ALA A 1020 REMARK 465 GLU A 1021 REMARK 465 GLU A 1022 REMARK 465 TYR A 1023 REMARK 465 LEU A 1024 REMARK 465 VAL A 1025 REMARK 465 PRO A 1026 REMARK 465 GLN A 1027 REMARK 465 GLN A 1028 REMARK 465 GLY A 1029 REMARK 465 ALA A 1030 REMARK 465 ALA A 1031 REMARK 465 ALA A 1032 REMARK 465 SER A 1033 REMARK 465 HIS A 1034 REMARK 465 HIS A 1035 REMARK 465 HIS A 1036 REMARK 465 HIS A 1037 REMARK 465 HIS A 1038 REMARK 465 HIS A 1039 REMARK 465 MET B 702 REMARK 465 SER B 703 REMARK 465 GLY B 704 REMARK 465 ALA B 705 REMARK 465 ASP B 880 REMARK 465 GLY B 881 REMARK 465 ASP B 993 REMARK 465 LEU B 994 REMARK 465 GLY B 995 REMARK 465 PRO B 996 REMARK 465 ALA B 997 REMARK 465 SER B 998 REMARK 465 GLU B 1010 REMARK 465 ASP B 1011 REMARK 465 ASP B 1012 REMARK 465 ASP B 1013 REMARK 465 MET B 1014 REMARK 465 GLY B 1015 REMARK 465 ASP B 1016 REMARK 465 LEU B 1017 REMARK 465 VAL B 1018 REMARK 465 ASP B 1019 REMARK 465 ALA B 1020 REMARK 465 GLU B 1021 REMARK 465 GLU B 1022 REMARK 465 TYR B 1023 REMARK 465 LEU B 1024 REMARK 465 VAL B 1025 REMARK 465 PRO B 1026 REMARK 465 GLN B 1027 REMARK 465 GLN B 1028 REMARK 465 GLY B 1029 REMARK 465 ALA B 1030 REMARK 465 ALA B 1031 REMARK 465 ALA B 1032 REMARK 465 SER B 1033 REMARK 465 HIS B 1034 REMARK 465 HIS B 1035 REMARK 465 HIS B 1036 REMARK 465 HIS B 1037 REMARK 465 HIS B 1038 REMARK 465 HIS B 1039 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 895 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 844 -6.56 67.05 REMARK 500 ASP A 845 35.39 -144.32 REMARK 500 ASP A 863 -72.25 74.00 REMARK 500 ASP A 873 51.73 38.24 REMARK 500 GLN B 709 36.94 -98.59 REMARK 500 ASN B 758 50.77 -105.23 REMARK 500 VAL B 777 82.07 -54.79 REMARK 500 LEU B 790 43.05 -94.99 REMARK 500 ARG B 844 -10.52 79.07 REMARK 500 ASP B 845 40.78 -141.82 REMARK 500 ASP B 863 -78.34 85.39 REMARK 500 LEU B1008 5.62 -69.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 03Q A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 03Q B 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3POZ RELATED DB: PDB DBREF 3PP0 A 706 1009 UNP P04626 ERBB2_HUMAN 706 1009 DBREF 3PP0 B 706 1009 UNP P04626 ERBB2_HUMAN 706 1009 SEQADV 3PP0 ALA A 706 UNP P04626 MET 706 ENGINEERED MUTATION SEQADV 3PP0 LEU A 711 UNP P04626 GLN 711 ENGINEERED MUTATION SEQADV 3PP0 LEU A 712 UNP P04626 MET 712 ENGINEERED MUTATION SEQADV 3PP0 ALA B 706 UNP P04626 MET 706 ENGINEERED MUTATION SEQADV 3PP0 LEU B 711 UNP P04626 GLN 711 ENGINEERED MUTATION SEQADV 3PP0 LEU B 712 UNP P04626 MET 712 ENGINEERED MUTATION SEQRES 1 A 338 MET SER GLY ALA ALA PRO ASN GLN ALA LEU LEU ARG ILE SEQRES 2 A 338 LEU LYS GLU THR GLU LEU ARG LYS VAL LYS VAL LEU GLY SEQRES 3 A 338 SER GLY ALA PHE GLY THR VAL TYR LYS GLY ILE TRP ILE SEQRES 4 A 338 PRO ASP GLY GLU ASN VAL LYS ILE PRO VAL ALA ILE LYS SEQRES 5 A 338 VAL LEU ARG GLU ASN THR SER PRO LYS ALA ASN LYS GLU SEQRES 6 A 338 ILE LEU ASP GLU ALA TYR VAL MET ALA GLY VAL GLY SER SEQRES 7 A 338 PRO TYR VAL SER ARG LEU LEU GLY ILE CYS LEU THR SER SEQRES 8 A 338 THR VAL GLN LEU VAL THR GLN LEU MET PRO TYR GLY CYS SEQRES 9 A 338 LEU LEU ASP HIS VAL ARG GLU ASN ARG GLY ARG LEU GLY SEQRES 10 A 338 SER GLN ASP LEU LEU ASN TRP CYS MET GLN ILE ALA LYS SEQRES 11 A 338 GLY MET SER TYR LEU GLU ASP VAL ARG LEU VAL HIS ARG SEQRES 12 A 338 ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS SER PRO ASN SEQRES 13 A 338 HIS VAL LYS ILE THR ASP PHE GLY LEU ALA ARG LEU LEU SEQRES 14 A 338 ASP ILE ASP GLU THR GLU TYR HIS ALA ASP GLY GLY LYS SEQRES 15 A 338 VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU ARG SEQRES 16 A 338 ARG ARG PHE THR HIS GLN SER ASP VAL TRP SER TYR GLY SEQRES 17 A 338 VAL THR VAL TRP GLU LEU MET THR PHE GLY ALA LYS PRO SEQRES 18 A 338 TYR ASP GLY ILE PRO ALA ARG GLU ILE PRO ASP LEU LEU SEQRES 19 A 338 GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR SEQRES 20 A 338 ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET ILE SEQRES 21 A 338 ASP SER GLU CYS ARG PRO ARG PHE ARG GLU LEU VAL SER SEQRES 22 A 338 GLU PHE SER ARG MET ALA ARG ASP PRO GLN ARG PHE VAL SEQRES 23 A 338 VAL ILE GLN ASN GLU ASP LEU GLY PRO ALA SER PRO LEU SEQRES 24 A 338 ASP SER THR PHE TYR ARG SER LEU LEU GLU ASP ASP ASP SEQRES 25 A 338 MET GLY ASP LEU VAL ASP ALA GLU GLU TYR LEU VAL PRO SEQRES 26 A 338 GLN GLN GLY ALA ALA ALA SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 338 MET SER GLY ALA ALA PRO ASN GLN ALA LEU LEU ARG ILE SEQRES 2 B 338 LEU LYS GLU THR GLU LEU ARG LYS VAL LYS VAL LEU GLY SEQRES 3 B 338 SER GLY ALA PHE GLY THR VAL TYR LYS GLY ILE TRP ILE SEQRES 4 B 338 PRO ASP GLY GLU ASN VAL LYS ILE PRO VAL ALA ILE LYS SEQRES 5 B 338 VAL LEU ARG GLU ASN THR SER PRO LYS ALA ASN LYS GLU SEQRES 6 B 338 ILE LEU ASP GLU ALA TYR VAL MET ALA GLY VAL GLY SER SEQRES 7 B 338 PRO TYR VAL SER ARG LEU LEU GLY ILE CYS LEU THR SER SEQRES 8 B 338 THR VAL GLN LEU VAL THR GLN LEU MET PRO TYR GLY CYS SEQRES 9 B 338 LEU LEU ASP HIS VAL ARG GLU ASN ARG GLY ARG LEU GLY SEQRES 10 B 338 SER GLN ASP LEU LEU ASN TRP CYS MET GLN ILE ALA LYS SEQRES 11 B 338 GLY MET SER TYR LEU GLU ASP VAL ARG LEU VAL HIS ARG SEQRES 12 B 338 ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS SER PRO ASN SEQRES 13 B 338 HIS VAL LYS ILE THR ASP PHE GLY LEU ALA ARG LEU LEU SEQRES 14 B 338 ASP ILE ASP GLU THR GLU TYR HIS ALA ASP GLY GLY LYS SEQRES 15 B 338 VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU ARG SEQRES 16 B 338 ARG ARG PHE THR HIS GLN SER ASP VAL TRP SER TYR GLY SEQRES 17 B 338 VAL THR VAL TRP GLU LEU MET THR PHE GLY ALA LYS PRO SEQRES 18 B 338 TYR ASP GLY ILE PRO ALA ARG GLU ILE PRO ASP LEU LEU SEQRES 19 B 338 GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR SEQRES 20 B 338 ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET ILE SEQRES 21 B 338 ASP SER GLU CYS ARG PRO ARG PHE ARG GLU LEU VAL SER SEQRES 22 B 338 GLU PHE SER ARG MET ALA ARG ASP PRO GLN ARG PHE VAL SEQRES 23 B 338 VAL ILE GLN ASN GLU ASP LEU GLY PRO ALA SER PRO LEU SEQRES 24 B 338 ASP SER THR PHE TYR ARG SER LEU LEU GLU ASP ASP ASP SEQRES 25 B 338 MET GLY ASP LEU VAL ASP ALA GLU GLU TYR LEU VAL PRO SEQRES 26 B 338 GLN GLN GLY ALA ALA ALA SER HIS HIS HIS HIS HIS HIS HET 03Q A 1 34 HET 03Q B 2 34 HETNAM 03Q 2-{2-[4-({5-CHLORO-6-[3-(TRIFLUOROMETHYL) HETNAM 2 03Q PHENOXY]PYRIDIN-3-YL}AMINO)-5H-PYRROLO[3,2- HETNAM 3 03Q D]PYRIMIDIN-5-YL]ETHOXY}ETHANOL FORMUL 3 03Q 2(C22 H19 CL F3 N5 O3) FORMUL 5 HOH *190(H2 O) HELIX 1 1 LYS A 716 THR A 718 5 3 HELIX 2 2 SER A 760 ALA A 775 1 16 HELIX 3 3 CYS A 805 ASN A 813 1 9 HELIX 4 4 GLY A 818 VAL A 839 1 22 HELIX 5 5 ALA A 847 ARG A 849 5 3 HELIX 6 6 PRO A 885 MET A 889 5 5 HELIX 7 7 ALA A 890 ARG A 897 1 8 HELIX 8 8 THR A 900 THR A 917 1 18 HELIX 9 9 PRO A 927 ARG A 929 5 3 HELIX 10 10 GLU A 930 LYS A 937 1 8 HELIX 11 11 THR A 948 TRP A 959 1 12 HELIX 12 12 ASP A 962 ARG A 966 5 5 HELIX 13 13 ARG A 968 ARG A 981 1 14 HELIX 14 14 ASP A 982 VAL A 987 1 6 HELIX 15 15 VAL A 988 ASP A 993 5 6 HELIX 16 16 LYS B 716 THR B 718 5 3 HELIX 17 17 SER B 760 GLY B 776 1 17 HELIX 18 18 CYS B 805 ASN B 813 1 9 HELIX 19 19 GLY B 818 VAL B 839 1 22 HELIX 20 20 ALA B 847 ARG B 849 5 3 HELIX 21 21 PRO B 885 MET B 889 5 5 HELIX 22 22 ALA B 890 ARG B 897 1 8 HELIX 23 23 THR B 900 THR B 917 1 18 HELIX 24 24 PRO B 927 ARG B 929 5 3 HELIX 25 25 GLU B 930 LYS B 937 1 8 HELIX 26 26 THR B 948 TRP B 959 1 12 HELIX 27 27 ASP B 962 ARG B 966 5 5 HELIX 28 28 ARG B 968 ASP B 982 1 15 HELIX 29 29 ASP B 982 VAL B 987 1 6 HELIX 30 30 VAL B 988 GLU B 992 5 5 HELIX 31 31 SER B 1002 LEU B 1008 1 7 SHEET 1 A 5 LEU A 720 SER A 728 0 SHEET 2 A 5 GLY A 732 TRP A 739 -1 O LYS A 736 N VAL A 723 SHEET 3 A 5 ILE A 748 LEU A 755 -1 O VAL A 754 N THR A 733 SHEET 4 A 5 VAL A 794 GLN A 799 -1 O LEU A 796 N LYS A 753 SHEET 5 A 5 LEU A 785 LEU A 790 -1 N CYS A 789 O GLN A 795 SHEET 1 B 2 LEU A 841 VAL A 842 0 SHEET 2 B 2 ARG A 868 LEU A 869 -1 O ARG A 868 N VAL A 842 SHEET 1 C 2 VAL A 851 SER A 855 0 SHEET 2 C 2 HIS A 858 ILE A 861 -1 O LYS A 860 N LEU A 852 SHEET 1 D 2 TYR A 877 HIS A 878 0 SHEET 2 D 2 ARG A 898 PHE A 899 -1 O PHE A 899 N TYR A 877 SHEET 1 E 6 ARG B 713 ILE B 714 0 SHEET 2 E 6 LEU B 785 CYS B 789 1 O ILE B 788 N ARG B 713 SHEET 3 E 6 GLN B 795 GLN B 799 -1 O VAL B 797 N LEU B 786 SHEET 4 E 6 ILE B 748 LEU B 755 -1 N LYS B 753 O LEU B 796 SHEET 5 E 6 GLY B 732 TRP B 739 -1 N TYR B 735 O ILE B 752 SHEET 6 E 6 LEU B 720 GLY B 729 -1 N LEU B 726 O VAL B 734 SHEET 1 F 2 LEU B 841 VAL B 842 0 SHEET 2 F 2 ARG B 868 LEU B 869 -1 O ARG B 868 N VAL B 842 SHEET 1 G 2 VAL B 851 SER B 855 0 SHEET 2 G 2 HIS B 858 ILE B 861 -1 O LYS B 860 N LEU B 852 SHEET 1 H 2 TYR B 877 HIS B 878 0 SHEET 2 H 2 ARG B 898 PHE B 899 -1 O PHE B 899 N TYR B 877 SITE 1 AC1 21 HOH A 22 LEU A 726 GLY A 729 VAL A 734 SITE 2 AC1 21 ALA A 751 LYS A 753 GLU A 770 MET A 774 SITE 3 AC1 21 SER A 783 LEU A 785 LEU A 796 THR A 798 SITE 4 AC1 21 GLN A 799 LEU A 800 MET A 801 ARG A 849 SITE 5 AC1 21 ASN A 850 LEU A 852 THR A 862 ASP A 863 SITE 6 AC1 21 PHE A 864 SITE 1 AC2 20 HOH B 59 LEU B 726 VAL B 734 ALA B 751 SITE 2 AC2 20 LYS B 753 GLU B 770 ALA B 771 MET B 774 SITE 3 AC2 20 SER B 783 LEU B 785 LEU B 796 THR B 798 SITE 4 AC2 20 GLN B 799 MET B 801 ARG B 849 ASN B 850 SITE 5 AC2 20 LEU B 852 THR B 862 ASP B 863 PHE B1004 CRYST1 48.705 78.951 152.675 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020532 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012666 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006550 0.00000