data_3PRK # _entry.id 3PRK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3PRK WWPDB D_1000179114 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PRK _pdbx_database_status.recvd_initial_deposition_date 1991-08-07 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wolf, W.M.' 1 'Bajorath, J.' 2 'Mueller, A.' 3 'Raghunathan, S.' 4 'Singh, T.P.' 5 'Hinrichs, W.' 6 'Saenger, W.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Inhibition of proteinase K by methoxysuccinyl-Ala-Ala-Pro-Ala-chloromethyl ketone. An x-ray study at 2.2-A resolution.' J.Biol.Chem. 266 17695 17699 1991 JBCHA3 US 0021-9258 0071 ? 1894649 ? 1 ;Synchrotron X-Ray Data Collection and Restrained Least-Squares Refinement of the Crystal Structure of Proteinase K at 1.5 Angstroms Resolution ; 'Acta Crystallogr.,Sect.B' 44 163 ? 1988 ASBSDK DK 0108-7681 0622 ? ? ? 2 'Crystallization of the Bifunctional Proteinase(Slash)Amylase Inhibitor Pki-3 and of its Complex with Proteinase K' 'FEBS Lett.' 197 111 ? 1986 FEBLAL NE 0014-5793 0165 ? ? ? 3 'Active-Site Geometry of Proteinase K. Crystallographic Study of its Complex with a Dipeptide Chloromethyl Ketone Inhibitor' 'FEBS Lett.' 197 105 ? 1986 FEBLAL NE 0014-5793 0165 ? ? ? 4 'Three-Dimensional Structure of Fungal Proteinase K Reveals Similarity to Bacterial Subtilisin' 'Embo J.' 3 1311 ? 1984 EMJODG UK 0261-4189 0897 ? ? ? 5 'Crystallization of the Fungal Enzyme Proteinase K and Amino Acid Composition' J.Mol.Biol. 97 267 ? 1975 JMOBAK UK 0022-2836 0070 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wolf, W.M.' 1 primary 'Bajorath, J.' 2 primary 'Muller, A.' 3 primary 'Raghunathan, S.' 4 primary 'Singh, T.P.' 5 primary 'Hinrichs, W.' 6 primary 'Saenger, W.' 7 1 'Betzel, C.' 8 1 'Pal, G.P.' 9 1 'Saenger, W.' 10 2 'Pal, G.P.' 11 2 'Betzel, C.' 12 2 'Jany, K.-D.' 13 2 'Saenger, W.' 14 3 'Betzel, C.' 15 3 'Pal, G.P.' 16 3 'Struck, M.' 17 3 'Jany, K.-D.' 18 3 'Saenger, W.' 19 4 'Paehler, A.' 20 4 'Banerjee, A.' 21 4 'Dattagupta, J.K.' 22 4 'Fujiwara, T.' 23 4 'Lindner, K.' 24 4 'Pal, G.P.' 25 4 'Suck, D.' 26 4 'Weber, G.' 27 4 'Saenger, W.' 28 5 'Dattagupta, J.K.' 29 5 'Fujiwara, T.' 30 5 'Grishin, E.V.' 31 5 'Lindner, K.' 32 5 'Manor, P.C.' 33 5 'Pieniazek, N.J.' 34 5 'Saenger, W.' 35 5 'Suck, D.' 36 # _cell.entry_id 3PRK _cell.length_a 68.300 _cell.length_b 68.300 _cell.length_c 108.400 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PRK _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEINASE K' 28930.783 1 3.4.21.64 ? ? ? 2 polymer syn 'METHOXYSUCCINYL-ALA-ALA-PRO-ALA-CHLOROMETHYL KETONE' 476.952 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 170 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; E ? 2 'polypeptide(L)' no yes '(MSU)AAP(ALV)(0QE)' XAAPAX I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 GLN n 1 4 THR n 1 5 ASN n 1 6 ALA n 1 7 PRO n 1 8 TRP n 1 9 GLY n 1 10 LEU n 1 11 ALA n 1 12 ARG n 1 13 ILE n 1 14 SER n 1 15 SER n 1 16 THR n 1 17 SER n 1 18 PRO n 1 19 GLY n 1 20 THR n 1 21 SER n 1 22 THR n 1 23 TYR n 1 24 TYR n 1 25 TYR n 1 26 ASP n 1 27 GLU n 1 28 SER n 1 29 ALA n 1 30 GLY n 1 31 GLN n 1 32 GLY n 1 33 SER n 1 34 CYS n 1 35 VAL n 1 36 TYR n 1 37 VAL n 1 38 ILE n 1 39 ASP n 1 40 THR n 1 41 GLY n 1 42 ILE n 1 43 GLU n 1 44 ALA n 1 45 SER n 1 46 HIS n 1 47 PRO n 1 48 GLU n 1 49 PHE n 1 50 GLU n 1 51 GLY n 1 52 ARG n 1 53 ALA n 1 54 GLN n 1 55 MET n 1 56 VAL n 1 57 LYS n 1 58 THR n 1 59 TYR n 1 60 TYR n 1 61 TYR n 1 62 SER n 1 63 SER n 1 64 ARG n 1 65 ASP n 1 66 GLY n 1 67 ASN n 1 68 GLY n 1 69 HIS n 1 70 GLY n 1 71 THR n 1 72 HIS n 1 73 CYS n 1 74 ALA n 1 75 GLY n 1 76 THR n 1 77 VAL n 1 78 GLY n 1 79 SER n 1 80 ARG n 1 81 THR n 1 82 TYR n 1 83 GLY n 1 84 VAL n 1 85 ALA n 1 86 LYS n 1 87 LYS n 1 88 THR n 1 89 GLN n 1 90 LEU n 1 91 PHE n 1 92 GLY n 1 93 VAL n 1 94 LYS n 1 95 VAL n 1 96 LEU n 1 97 ASP n 1 98 ASP n 1 99 ASN n 1 100 GLY n 1 101 SER n 1 102 GLY n 1 103 GLN n 1 104 TYR n 1 105 SER n 1 106 THR n 1 107 ILE n 1 108 ILE n 1 109 ALA n 1 110 GLY n 1 111 MET n 1 112 ASP n 1 113 PHE n 1 114 VAL n 1 115 ALA n 1 116 SER n 1 117 ASP n 1 118 LYS n 1 119 ASN n 1 120 ASN n 1 121 ARG n 1 122 ASN n 1 123 CYS n 1 124 PRO n 1 125 LYS n 1 126 GLY n 1 127 VAL n 1 128 VAL n 1 129 ALA n 1 130 SER n 1 131 LEU n 1 132 SER n 1 133 LEU n 1 134 GLY n 1 135 GLY n 1 136 GLY n 1 137 TYR n 1 138 SER n 1 139 SER n 1 140 SER n 1 141 VAL n 1 142 ASN n 1 143 SER n 1 144 ALA n 1 145 ALA n 1 146 ALA n 1 147 ARG n 1 148 LEU n 1 149 GLN n 1 150 SER n 1 151 SER n 1 152 GLY n 1 153 VAL n 1 154 MET n 1 155 VAL n 1 156 ALA n 1 157 VAL n 1 158 ALA n 1 159 ALA n 1 160 GLY n 1 161 ASN n 1 162 ASN n 1 163 ASN n 1 164 ALA n 1 165 ASP n 1 166 ALA n 1 167 ARG n 1 168 ASN n 1 169 TYR n 1 170 SER n 1 171 PRO n 1 172 ALA n 1 173 SER n 1 174 GLU n 1 175 PRO n 1 176 SER n 1 177 VAL n 1 178 CYS n 1 179 THR n 1 180 VAL n 1 181 GLY n 1 182 ALA n 1 183 SER n 1 184 ASP n 1 185 ARG n 1 186 TYR n 1 187 ASP n 1 188 ARG n 1 189 ARG n 1 190 SER n 1 191 SER n 1 192 PHE n 1 193 SER n 1 194 ASN n 1 195 TYR n 1 196 GLY n 1 197 SER n 1 198 VAL n 1 199 LEU n 1 200 ASP n 1 201 ILE n 1 202 PHE n 1 203 GLY n 1 204 PRO n 1 205 GLY n 1 206 THR n 1 207 SER n 1 208 ILE n 1 209 LEU n 1 210 SER n 1 211 THR n 1 212 TRP n 1 213 ILE n 1 214 GLY n 1 215 GLY n 1 216 SER n 1 217 THR n 1 218 ARG n 1 219 SER n 1 220 ILE n 1 221 SER n 1 222 GLY n 1 223 THR n 1 224 SER n 1 225 MET n 1 226 ALA n 1 227 THR n 1 228 PRO n 1 229 HIS n 1 230 VAL n 1 231 ALA n 1 232 GLY n 1 233 LEU n 1 234 ALA n 1 235 ALA n 1 236 TYR n 1 237 LEU n 1 238 MET n 1 239 THR n 1 240 LEU n 1 241 GLY n 1 242 LYS n 1 243 THR n 1 244 THR n 1 245 ALA n 1 246 ALA n 1 247 SER n 1 248 ALA n 1 249 CYS n 1 250 ARG n 1 251 TYR n 1 252 ILE n 1 253 ALA n 1 254 ASP n 1 255 THR n 1 256 ALA n 1 257 ASN n 1 258 LYS n 1 259 GLY n 1 260 ASP n 1 261 LEU n 1 262 SER n 1 263 ASN n 1 264 ILE n 1 265 PRO n 1 266 PHE n 1 267 GLY n 1 268 THR n 1 269 VAL n 1 270 ASN n 1 271 LEU n 1 272 LEU n 1 273 ALA n 1 274 TYR n 1 275 ASN n 1 276 ASN n 1 277 TYR n 1 278 GLN n 1 279 ALA n 2 1 MSU n 2 2 ALA n 2 3 ALA n 2 4 PRO n 2 5 ALV n 2 6 0QE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PROK _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue limber _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Engyodontium album' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 37998 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP PRTK_TRIAL 1 P06873 1 ;MRLSVLLSLLPLALGAPAVEQRSEAAPLIEARGEMVANKYIVKFKEGSALSALDAAMEKISGKPDHVYKNVFSGFAATLD ENMVRVLRAHPDVEYIEQDAVVTINAAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQM VKTYYYSSRDGNGHGTHCAGTVGSRTYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGG GYSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGG STRSISGTSMATPHVAGLAAYLMTLGKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; ? 2 PDB 3PRK 2 3PRK ? XAAPAX ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PRK E 1 ? 279 ? P06873 106 ? 384 ? 1 279 2 2 3PRK I 1 ? 6 ? 3PRK 280 ? 285 ? 280 285 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0QE non-polymer . chloromethane 'Chloro Methyl group' 'C H3 Cl' 50.488 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ALV peptide-like n '(2S)-2-aminopropane-1,1-diol' ? 'C3 H9 N O2' 91.109 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSU non-polymer . 'SUCCINIC ACID MONOMETHYL ESTER' ? 'C5 H8 O4' 132.115 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3PRK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 3PRK _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 2.2 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2053 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 170 _refine_hist.number_atoms_total 2224 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? t_angle_deg 1.824 ? ? ? 'X-RAY DIFFRACTION' ? t_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_gen_planes ? ? ? ? 'X-RAY DIFFRACTION' ? t_it ? ? ? ? 'X-RAY DIFFRACTION' ? t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 3PRK _struct.title 'INHIBITION OF PROTEINASE K BY METHOXYSUCCINYL-ALA-ALA-PRO-ALA-CHLOROMETHYL KETONE. AN X-RAY STUDY AT 2.2-ANGSTROMS RESOLUTION' _struct.pdbx_descriptor 'PROTEINASE K (E.C.3.4.21.64) COMPLEXED WITH INHIBITOR METHOXYSUCCINYL-ALA-ALA-PRO-ALA-CHLOROMETHYL KETONE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PRK _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'SERINE PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 A1 PRO A 7 ? SER A 15 ? PRO E 7 SER E 15 1 ? 9 HELX_P HELX_P2 A2 GLY A 68 ? SER A 79 ? GLY E 68 SER E 79 1 ? 12 HELX_P HELX_P3 A3 GLN A 103 ? ARG A 121 ? GLN E 103 ARG E 121 1 ? 19 HELX_P HELX_P4 A4 SER A 138 ? VAL A 153 ? SER E 138 VAL E 153 1 ? 16 HELX_P HELX_P5 A5 GLY A 222 ? LYS A 242 ? GLY E 222 LYS E 242 1 ? 21 HELX_P HELX_P6 A6 THR A 244 ? ALA A 256 ? THR E 244 ALA E 256 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 34 SG ? ? ? 1_555 A CYS 123 SG ? ? E CYS 34 E CYS 123 1_555 ? ? ? ? ? ? ? 2.031 ? disulf2 disulf ? ? A CYS 178 SG ? ? ? 1_555 A CYS 249 SG ? ? E CYS 178 E CYS 249 1_555 ? ? ? ? ? ? ? 2.040 ? metalc1 metalc ? ? C CA . CA ? ? ? 1_555 A ASP 200 OD1 ? ? E CA 500 E ASP 200 1_555 ? ? ? ? ? ? ? 2.471 ? metalc2 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? E CA 500 E HOH 293 1_555 ? ? ? ? ? ? ? 2.642 ? metalc3 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? E CA 500 E HOH 295 1_555 ? ? ? ? ? ? ? 2.763 ? metalc4 metalc ? ? C CA . CA ? ? ? 1_555 A ASP 200 OD2 ? ? E CA 500 E ASP 200 1_555 ? ? ? ? ? ? ? 2.540 ? metalc5 metalc ? ? C CA . CA ? ? ? 1_555 A PRO 175 O ? ? E CA 500 E PRO 175 1_555 ? ? ? ? ? ? ? 2.429 ? metalc6 metalc ? ? C CA . CA ? ? ? 1_555 A VAL 177 O ? ? E CA 500 E VAL 177 1_555 ? ? ? ? ? ? ? 2.376 ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? E CA 500 E HOH 294 1_555 ? ? ? ? ? ? ? 2.464 ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? E CA 500 E HOH 296 1_555 ? ? ? ? ? ? ? 2.518 ? covale1 covale ? ? B MSU 1 C1 ? ? ? 1_555 B ALA 2 N ? ? I MSU 280 I ALA 281 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? B 0QE 6 C1 ? ? ? 1_555 A HIS 69 NE2 ? ? I 0QE 285 E HIS 69 1_555 ? ? ? ? ? ? ? 1.405 ? covale3 covale ? ? B PRO 4 C ? ? ? 1_555 B ALV 5 N ? ? I PRO 283 I ALV 284 1_555 ? ? ? ? ? ? ? 1.325 ? covale4 covale ? ? B ALV 5 C ? ? ? 1_555 B 0QE 6 C1 ? ? I ALV 284 I 0QE 285 1_555 ? ? ? ? ? ? ? 1.549 ? covale5 covale ? ? B ALV 5 C ? ? ? 1_555 A SER 224 OG ? ? I ALV 284 E SER 224 1_555 ? ? ? ? ? ? ? 1.351 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 170 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 170 _struct_mon_prot_cis.auth_asym_id E _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 171 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 171 _struct_mon_prot_cis.pdbx_auth_asym_id_2 E _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.36 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details B1 ? 2 ? B2 ? 9 ? B3 ? 2 ? B4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense B1 1 2 ? anti-parallel B2 1 2 ? parallel B2 2 3 ? parallel B2 3 4 ? parallel B2 4 5 ? parallel B2 5 6 ? parallel B2 6 7 ? parallel B2 7 8 ? parallel B2 8 9 ? anti-parallel B3 1 2 ? anti-parallel B4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id B1 1 ALA A 1 ? ALA A 6 ? ALA E 1 ALA E 6 B1 2 SER A 21 ? TYR A 25 ? SER E 21 TYR E 25 B2 1 ARG A 52 ? TYR A 59 ? ARG E 52 TYR E 59 B2 2 GLN A 89 ? LEU A 96 ? GLN E 89 LEU E 96 B2 3 SER A 33 ? THR A 40 ? SER E 33 THR E 40 B2 4 GLY A 126 ? LEU A 131 ? GLY E 126 LEU E 131 B2 5 MET A 154 ? ALA A 159 ? MET E 154 ALA E 159 B2 6 CYS A 178 ? ASP A 184 ? CYS E 178 ASP E 184 B2 7 ASP A 200 ? THR A 206 ? ASP E 200 THR E 206 B2 8 ASN A 270 ? ALA A 273 ? ASN E 270 ALA E 273 B2 9 ASN A 257 ? GLY A 259 ? ASN E 257 GLY E 259 B3 1 GLY A 134 ? TYR A 137 ? GLY E 134 TYR E 137 B3 2 ASN A 168 ? SER A 170 ? ASN E 168 SER E 170 B4 1 SER A 207 ? TRP A 212 ? SER E 207 TRP E 212 B4 2 SER A 216 ? ILE A 220 ? SER E 216 ILE E 220 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE CA E 500' AC2 Software ? ? ? ? 13 'BINDING SITE FOR CHAIN I OF METHOXYSUCCINYL-ALA-ALA-PRO-ALA-CHLOROMETHYL KETONE' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PRO A 175 ? PRO E 175 . ? 1_555 ? 2 AC1 7 VAL A 177 ? VAL E 177 . ? 1_555 ? 3 AC1 7 ASP A 200 ? ASP E 200 . ? 1_555 ? 4 AC1 7 HOH D . ? HOH E 293 . ? 1_555 ? 5 AC1 7 HOH D . ? HOH E 294 . ? 1_555 ? 6 AC1 7 HOH D . ? HOH E 295 . ? 1_555 ? 7 AC1 7 HOH D . ? HOH E 296 . ? 1_555 ? 8 AC2 13 HIS A 69 ? HIS E 69 . ? 1_555 ? 9 AC2 13 LEU A 96 ? LEU E 96 . ? 1_555 ? 10 AC2 13 GLY A 100 ? GLY E 100 . ? 1_555 ? 11 AC2 13 GLY A 102 ? GLY E 102 . ? 1_555 ? 12 AC2 13 TYR A 104 ? TYR E 104 . ? 1_555 ? 13 AC2 13 SER A 132 ? SER E 132 . ? 1_555 ? 14 AC2 13 LEU A 133 ? LEU E 133 . ? 1_555 ? 15 AC2 13 GLY A 134 ? GLY E 134 . ? 1_555 ? 16 AC2 13 ASN A 161 ? ASN E 161 . ? 1_555 ? 17 AC2 13 THR A 223 ? THR E 223 . ? 1_555 ? 18 AC2 13 SER A 224 ? SER E 224 . ? 1_555 ? 19 AC2 13 HOH E . ? HOH I 453 . ? 1_555 ? 20 AC2 13 HOH E . ? HOH I 455 . ? 1_555 ? # _database_PDB_matrix.entry_id 3PRK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3PRK _atom_sites.fract_transf_matrix[1][1] 0.014641 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014641 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009225 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'CIS PROLINE - PRO E 171' # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA E . n A 1 2 ALA 2 2 2 ALA ALA E . n A 1 3 GLN 3 3 3 GLN GLN E . n A 1 4 THR 4 4 4 THR THR E . n A 1 5 ASN 5 5 5 ASN ASN E . n A 1 6 ALA 6 6 6 ALA ALA E . n A 1 7 PRO 7 7 7 PRO PRO E . n A 1 8 TRP 8 8 8 TRP TRP E . n A 1 9 GLY 9 9 9 GLY GLY E . n A 1 10 LEU 10 10 10 LEU LEU E . n A 1 11 ALA 11 11 11 ALA ALA E . n A 1 12 ARG 12 12 12 ARG ARG E . n A 1 13 ILE 13 13 13 ILE ILE E . n A 1 14 SER 14 14 14 SER SER E . n A 1 15 SER 15 15 15 SER SER E . n A 1 16 THR 16 16 16 THR THR E . n A 1 17 SER 17 17 17 SER SER E . n A 1 18 PRO 18 18 18 PRO PRO E . n A 1 19 GLY 19 19 19 GLY GLY E . n A 1 20 THR 20 20 20 THR THR E . n A 1 21 SER 21 21 21 SER SER E . n A 1 22 THR 22 22 22 THR THR E . n A 1 23 TYR 23 23 23 TYR TYR E . n A 1 24 TYR 24 24 24 TYR TYR E . n A 1 25 TYR 25 25 25 TYR TYR E . n A 1 26 ASP 26 26 26 ASP ASP E . n A 1 27 GLU 27 27 27 GLU GLU E . n A 1 28 SER 28 28 28 SER SER E . n A 1 29 ALA 29 29 29 ALA ALA E . n A 1 30 GLY 30 30 30 GLY GLY E . n A 1 31 GLN 31 31 31 GLN GLN E . n A 1 32 GLY 32 32 32 GLY GLY E . n A 1 33 SER 33 33 33 SER SER E . n A 1 34 CYS 34 34 34 CYS CYS E . n A 1 35 VAL 35 35 35 VAL VAL E . n A 1 36 TYR 36 36 36 TYR TYR E . n A 1 37 VAL 37 37 37 VAL VAL E . n A 1 38 ILE 38 38 38 ILE ILE E . n A 1 39 ASP 39 39 39 ASP ASP E . n A 1 40 THR 40 40 40 THR THR E . n A 1 41 GLY 41 41 41 GLY GLY E . n A 1 42 ILE 42 42 42 ILE ILE E . n A 1 43 GLU 43 43 43 GLU GLU E . n A 1 44 ALA 44 44 44 ALA ALA E . n A 1 45 SER 45 45 45 SER SER E . n A 1 46 HIS 46 46 46 HIS HIS E . n A 1 47 PRO 47 47 47 PRO PRO E . n A 1 48 GLU 48 48 48 GLU GLU E . n A 1 49 PHE 49 49 49 PHE PHE E . n A 1 50 GLU 50 50 50 GLU GLU E . n A 1 51 GLY 51 51 51 GLY GLY E . n A 1 52 ARG 52 52 52 ARG ARG E . n A 1 53 ALA 53 53 53 ALA ALA E . n A 1 54 GLN 54 54 54 GLN GLN E . n A 1 55 MET 55 55 55 MET MET E . n A 1 56 VAL 56 56 56 VAL VAL E . n A 1 57 LYS 57 57 57 LYS LYS E . n A 1 58 THR 58 58 58 THR THR E . n A 1 59 TYR 59 59 59 TYR TYR E . n A 1 60 TYR 60 60 60 TYR TYR E . n A 1 61 TYR 61 61 61 TYR TYR E . n A 1 62 SER 62 62 62 SER SER E . n A 1 63 SER 63 63 63 SER SER E . n A 1 64 ARG 64 64 64 ARG ARG E . n A 1 65 ASP 65 65 65 ASP ASP E . n A 1 66 GLY 66 66 66 GLY GLY E . n A 1 67 ASN 67 67 67 ASN ASN E . n A 1 68 GLY 68 68 68 GLY GLY E . n A 1 69 HIS 69 69 69 HIS HIS E . n A 1 70 GLY 70 70 70 GLY GLY E . n A 1 71 THR 71 71 71 THR THR E . n A 1 72 HIS 72 72 72 HIS HIS E . n A 1 73 CYS 73 73 73 CYS CYS E . n A 1 74 ALA 74 74 74 ALA ALA E . n A 1 75 GLY 75 75 75 GLY GLY E . n A 1 76 THR 76 76 76 THR THR E . n A 1 77 VAL 77 77 77 VAL VAL E . n A 1 78 GLY 78 78 78 GLY GLY E . n A 1 79 SER 79 79 79 SER SER E . n A 1 80 ARG 80 80 80 ARG ARG E . n A 1 81 THR 81 81 81 THR THR E . n A 1 82 TYR 82 82 82 TYR TYR E . n A 1 83 GLY 83 83 83 GLY GLY E . n A 1 84 VAL 84 84 84 VAL VAL E . n A 1 85 ALA 85 85 85 ALA ALA E . n A 1 86 LYS 86 86 86 LYS LYS E . n A 1 87 LYS 87 87 87 LYS LYS E . n A 1 88 THR 88 88 88 THR THR E . n A 1 89 GLN 89 89 89 GLN GLN E . n A 1 90 LEU 90 90 90 LEU LEU E . n A 1 91 PHE 91 91 91 PHE PHE E . n A 1 92 GLY 92 92 92 GLY GLY E . n A 1 93 VAL 93 93 93 VAL VAL E . n A 1 94 LYS 94 94 94 LYS LYS E . n A 1 95 VAL 95 95 95 VAL VAL E . n A 1 96 LEU 96 96 96 LEU LEU E . n A 1 97 ASP 97 97 97 ASP ASP E . n A 1 98 ASP 98 98 98 ASP ASP E . n A 1 99 ASN 99 99 99 ASN ASN E . n A 1 100 GLY 100 100 100 GLY GLY E . n A 1 101 SER 101 101 101 SER SER E . n A 1 102 GLY 102 102 102 GLY GLY E . n A 1 103 GLN 103 103 103 GLN GLN E . n A 1 104 TYR 104 104 104 TYR TYR E . n A 1 105 SER 105 105 105 SER SER E . n A 1 106 THR 106 106 106 THR THR E . n A 1 107 ILE 107 107 107 ILE ILE E . n A 1 108 ILE 108 108 108 ILE ILE E . n A 1 109 ALA 109 109 109 ALA ALA E . n A 1 110 GLY 110 110 110 GLY GLY E . n A 1 111 MET 111 111 111 MET MET E . n A 1 112 ASP 112 112 112 ASP ASP E . n A 1 113 PHE 113 113 113 PHE PHE E . n A 1 114 VAL 114 114 114 VAL VAL E . n A 1 115 ALA 115 115 115 ALA ALA E . n A 1 116 SER 116 116 116 SER SER E . n A 1 117 ASP 117 117 117 ASP ASP E . n A 1 118 LYS 118 118 118 LYS LYS E . n A 1 119 ASN 119 119 119 ASN ASN E . n A 1 120 ASN 120 120 120 ASN ASN E . n A 1 121 ARG 121 121 121 ARG ARG E . n A 1 122 ASN 122 122 122 ASN ASN E . n A 1 123 CYS 123 123 123 CYS CYS E . n A 1 124 PRO 124 124 124 PRO PRO E . n A 1 125 LYS 125 125 125 LYS LYS E . n A 1 126 GLY 126 126 126 GLY GLY E . n A 1 127 VAL 127 127 127 VAL VAL E . n A 1 128 VAL 128 128 128 VAL VAL E . n A 1 129 ALA 129 129 129 ALA ALA E . n A 1 130 SER 130 130 130 SER SER E . n A 1 131 LEU 131 131 131 LEU LEU E . n A 1 132 SER 132 132 132 SER SER E . n A 1 133 LEU 133 133 133 LEU LEU E . n A 1 134 GLY 134 134 134 GLY GLY E . n A 1 135 GLY 135 135 135 GLY GLY E . n A 1 136 GLY 136 136 136 GLY GLY E . n A 1 137 TYR 137 137 137 TYR TYR E . n A 1 138 SER 138 138 138 SER SER E . n A 1 139 SER 139 139 139 SER SER E . n A 1 140 SER 140 140 140 SER SER E . n A 1 141 VAL 141 141 141 VAL VAL E . n A 1 142 ASN 142 142 142 ASN ASN E . n A 1 143 SER 143 143 143 SER SER E . n A 1 144 ALA 144 144 144 ALA ALA E . n A 1 145 ALA 145 145 145 ALA ALA E . n A 1 146 ALA 146 146 146 ALA ALA E . n A 1 147 ARG 147 147 147 ARG ARG E . n A 1 148 LEU 148 148 148 LEU LEU E . n A 1 149 GLN 149 149 149 GLN GLN E . n A 1 150 SER 150 150 150 SER SER E . n A 1 151 SER 151 151 151 SER SER E . n A 1 152 GLY 152 152 152 GLY GLY E . n A 1 153 VAL 153 153 153 VAL VAL E . n A 1 154 MET 154 154 154 MET MET E . n A 1 155 VAL 155 155 155 VAL VAL E . n A 1 156 ALA 156 156 156 ALA ALA E . n A 1 157 VAL 157 157 157 VAL VAL E . n A 1 158 ALA 158 158 158 ALA ALA E . n A 1 159 ALA 159 159 159 ALA ALA E . n A 1 160 GLY 160 160 160 GLY GLY E . n A 1 161 ASN 161 161 161 ASN ASN E . n A 1 162 ASN 162 162 162 ASN ASN E . n A 1 163 ASN 163 163 163 ASN ASN E . n A 1 164 ALA 164 164 164 ALA ALA E . n A 1 165 ASP 165 165 165 ASP ASP E . n A 1 166 ALA 166 166 166 ALA ALA E . n A 1 167 ARG 167 167 167 ARG ARG E . n A 1 168 ASN 168 168 168 ASN ASN E . n A 1 169 TYR 169 169 169 TYR TYR E . n A 1 170 SER 170 170 170 SER SER E . n A 1 171 PRO 171 171 171 PRO PRO E . n A 1 172 ALA 172 172 172 ALA ALA E . n A 1 173 SER 173 173 173 SER SER E . n A 1 174 GLU 174 174 174 GLU GLU E . n A 1 175 PRO 175 175 175 PRO PRO E . n A 1 176 SER 176 176 176 SER SER E . n A 1 177 VAL 177 177 177 VAL VAL E . n A 1 178 CYS 178 178 178 CYS CYS E . n A 1 179 THR 179 179 179 THR THR E . n A 1 180 VAL 180 180 180 VAL VAL E . n A 1 181 GLY 181 181 181 GLY GLY E . n A 1 182 ALA 182 182 182 ALA ALA E . n A 1 183 SER 183 183 183 SER SER E . n A 1 184 ASP 184 184 184 ASP ASP E . n A 1 185 ARG 185 185 185 ARG ARG E . n A 1 186 TYR 186 186 186 TYR TYR E . n A 1 187 ASP 187 187 187 ASP ASP E . n A 1 188 ARG 188 188 188 ARG ARG E . n A 1 189 ARG 189 189 189 ARG ARG E . n A 1 190 SER 190 190 190 SER SER E . n A 1 191 SER 191 191 191 SER SER E . n A 1 192 PHE 192 192 192 PHE PHE E . n A 1 193 SER 193 193 193 SER SER E . n A 1 194 ASN 194 194 194 ASN ASN E . n A 1 195 TYR 195 195 195 TYR TYR E . n A 1 196 GLY 196 196 196 GLY GLY E . n A 1 197 SER 197 197 197 SER SER E . n A 1 198 VAL 198 198 198 VAL VAL E . n A 1 199 LEU 199 199 199 LEU LEU E . n A 1 200 ASP 200 200 200 ASP ASP E . n A 1 201 ILE 201 201 201 ILE ILE E . n A 1 202 PHE 202 202 202 PHE PHE E . n A 1 203 GLY 203 203 203 GLY GLY E . n A 1 204 PRO 204 204 204 PRO PRO E . n A 1 205 GLY 205 205 205 GLY GLY E . n A 1 206 THR 206 206 206 THR THR E . n A 1 207 SER 207 207 207 SER SER E . n A 1 208 ILE 208 208 208 ILE ILE E . n A 1 209 LEU 209 209 209 LEU LEU E . n A 1 210 SER 210 210 210 SER SER E . n A 1 211 THR 211 211 211 THR THR E . n A 1 212 TRP 212 212 212 TRP TRP E . n A 1 213 ILE 213 213 213 ILE ILE E . n A 1 214 GLY 214 214 214 GLY GLY E . n A 1 215 GLY 215 215 215 GLY GLY E . n A 1 216 SER 216 216 216 SER SER E . n A 1 217 THR 217 217 217 THR THR E . n A 1 218 ARG 218 218 218 ARG ARG E . n A 1 219 SER 219 219 219 SER SER E . n A 1 220 ILE 220 220 220 ILE ILE E . n A 1 221 SER 221 221 221 SER SER E . n A 1 222 GLY 222 222 222 GLY GLY E . n A 1 223 THR 223 223 223 THR THR E . n A 1 224 SER 224 224 224 SER SER E . n A 1 225 MET 225 225 225 MET MET E . n A 1 226 ALA 226 226 226 ALA ALA E . n A 1 227 THR 227 227 227 THR THR E . n A 1 228 PRO 228 228 228 PRO PRO E . n A 1 229 HIS 229 229 229 HIS HIS E . n A 1 230 VAL 230 230 230 VAL VAL E . n A 1 231 ALA 231 231 231 ALA ALA E . n A 1 232 GLY 232 232 232 GLY GLY E . n A 1 233 LEU 233 233 233 LEU LEU E . n A 1 234 ALA 234 234 234 ALA ALA E . n A 1 235 ALA 235 235 235 ALA ALA E . n A 1 236 TYR 236 236 236 TYR TYR E . n A 1 237 LEU 237 237 237 LEU LEU E . n A 1 238 MET 238 238 238 MET MET E . n A 1 239 THR 239 239 239 THR THR E . n A 1 240 LEU 240 240 240 LEU LEU E . n A 1 241 GLY 241 241 241 GLY GLY E . n A 1 242 LYS 242 242 242 LYS LYS E . n A 1 243 THR 243 243 243 THR THR E . n A 1 244 THR 244 244 244 THR THR E . n A 1 245 ALA 245 245 245 ALA ALA E . n A 1 246 ALA 246 246 246 ALA ALA E . n A 1 247 SER 247 247 247 SER SER E . n A 1 248 ALA 248 248 248 ALA ALA E . n A 1 249 CYS 249 249 249 CYS CYS E . n A 1 250 ARG 250 250 250 ARG ARG E . n A 1 251 TYR 251 251 251 TYR TYR E . n A 1 252 ILE 252 252 252 ILE ILE E . n A 1 253 ALA 253 253 253 ALA ALA E . n A 1 254 ASP 254 254 254 ASP ASP E . n A 1 255 THR 255 255 255 THR THR E . n A 1 256 ALA 256 256 256 ALA ALA E . n A 1 257 ASN 257 257 257 ASN ASN E . n A 1 258 LYS 258 258 258 LYS LYS E . n A 1 259 GLY 259 259 259 GLY GLY E . n A 1 260 ASP 260 260 260 ASP ASP E . n A 1 261 LEU 261 261 261 LEU LEU E . n A 1 262 SER 262 262 262 SER SER E . n A 1 263 ASN 263 263 263 ASN ASN E . n A 1 264 ILE 264 264 264 ILE ILE E . n A 1 265 PRO 265 265 265 PRO PRO E . n A 1 266 PHE 266 266 266 PHE PHE E . n A 1 267 GLY 267 267 267 GLY GLY E . n A 1 268 THR 268 268 268 THR THR E . n A 1 269 VAL 269 269 269 VAL VAL E . n A 1 270 ASN 270 270 270 ASN ASN E . n A 1 271 LEU 271 271 271 LEU LEU E . n A 1 272 LEU 272 272 272 LEU LEU E . n A 1 273 ALA 273 273 273 ALA ALA E . n A 1 274 TYR 274 274 274 TYR TYR E . n A 1 275 ASN 275 275 275 ASN ASN E . n A 1 276 ASN 276 276 276 ASN ASN E . n A 1 277 TYR 277 277 277 TYR TYR E . n A 1 278 GLN 278 278 278 GLN GLN E . n A 1 279 ALA 279 279 279 ALA ALA E . n B 2 1 MSU 1 280 280 MSU MSU I . n B 2 2 ALA 2 281 281 ALA ALA I . n B 2 3 ALA 3 282 282 ALA ALA I . n B 2 4 PRO 4 283 283 PRO PRO I . n B 2 5 ALV 5 284 284 ALV ALV I . n B 2 6 0QE 6 285 285 0QE 0QE I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 500 500 CA CA E . D 4 HOH 1 286 286 HOH HOH E . D 4 HOH 2 293 293 HOH HOH E . D 4 HOH 3 294 294 HOH HOH E . D 4 HOH 4 295 295 HOH HOH E . D 4 HOH 5 296 296 HOH HOH E . D 4 HOH 6 297 297 HOH HOH E . D 4 HOH 7 298 298 HOH HOH E . D 4 HOH 8 299 299 HOH HOH E . D 4 HOH 9 300 300 HOH HOH E . D 4 HOH 10 301 301 HOH HOH E . D 4 HOH 11 302 302 HOH HOH E . D 4 HOH 12 303 303 HOH HOH E . D 4 HOH 13 304 304 HOH HOH E . D 4 HOH 14 305 305 HOH HOH E . D 4 HOH 15 306 306 HOH HOH E . D 4 HOH 16 307 307 HOH HOH E . D 4 HOH 17 308 308 HOH HOH E . D 4 HOH 18 309 309 HOH HOH E . D 4 HOH 19 310 310 HOH HOH E . D 4 HOH 20 311 311 HOH HOH E . D 4 HOH 21 312 312 HOH HOH E . D 4 HOH 22 313 313 HOH HOH E . D 4 HOH 23 314 314 HOH HOH E . D 4 HOH 24 315 315 HOH HOH E . D 4 HOH 25 316 316 HOH HOH E . D 4 HOH 26 317 317 HOH HOH E . D 4 HOH 27 318 318 HOH HOH E . D 4 HOH 28 319 319 HOH HOH E . D 4 HOH 29 320 320 HOH HOH E . D 4 HOH 30 321 321 HOH HOH E . D 4 HOH 31 322 322 HOH HOH E . D 4 HOH 32 323 323 HOH HOH E . D 4 HOH 33 324 324 HOH HOH E . D 4 HOH 34 325 325 HOH HOH E . D 4 HOH 35 326 326 HOH HOH E . D 4 HOH 36 327 327 HOH HOH E . D 4 HOH 37 328 328 HOH HOH E . D 4 HOH 38 329 329 HOH HOH E . D 4 HOH 39 330 330 HOH HOH E . D 4 HOH 40 331 331 HOH HOH E . D 4 HOH 41 332 332 HOH HOH E . D 4 HOH 42 333 333 HOH HOH E . D 4 HOH 43 334 334 HOH HOH E . D 4 HOH 44 335 335 HOH HOH E . D 4 HOH 45 336 336 HOH HOH E . D 4 HOH 46 337 337 HOH HOH E . D 4 HOH 47 338 338 HOH HOH E . D 4 HOH 48 339 339 HOH HOH E . D 4 HOH 49 340 340 HOH HOH E . D 4 HOH 50 341 341 HOH HOH E . D 4 HOH 51 342 342 HOH HOH E . D 4 HOH 52 343 343 HOH HOH E . D 4 HOH 53 344 344 HOH HOH E . D 4 HOH 54 345 345 HOH HOH E . D 4 HOH 55 346 346 HOH HOH E . D 4 HOH 56 347 347 HOH HOH E . D 4 HOH 57 348 348 HOH HOH E . D 4 HOH 58 349 349 HOH HOH E . D 4 HOH 59 350 350 HOH HOH E . D 4 HOH 60 351 351 HOH HOH E . D 4 HOH 61 352 352 HOH HOH E . D 4 HOH 62 353 353 HOH HOH E . D 4 HOH 63 354 354 HOH HOH E . D 4 HOH 64 355 355 HOH HOH E . D 4 HOH 65 356 356 HOH HOH E . D 4 HOH 66 357 357 HOH HOH E . D 4 HOH 67 358 358 HOH HOH E . D 4 HOH 68 359 359 HOH HOH E . D 4 HOH 69 360 360 HOH HOH E . D 4 HOH 70 361 361 HOH HOH E . D 4 HOH 71 362 362 HOH HOH E . D 4 HOH 72 363 363 HOH HOH E . D 4 HOH 73 364 364 HOH HOH E . D 4 HOH 74 365 365 HOH HOH E . D 4 HOH 75 366 366 HOH HOH E . D 4 HOH 76 367 367 HOH HOH E . D 4 HOH 77 368 368 HOH HOH E . D 4 HOH 78 369 369 HOH HOH E . D 4 HOH 79 370 370 HOH HOH E . D 4 HOH 80 371 371 HOH HOH E . D 4 HOH 81 372 372 HOH HOH E . D 4 HOH 82 373 373 HOH HOH E . D 4 HOH 83 374 374 HOH HOH E . D 4 HOH 84 375 375 HOH HOH E . D 4 HOH 85 376 376 HOH HOH E . D 4 HOH 86 377 377 HOH HOH E . D 4 HOH 87 378 378 HOH HOH E . D 4 HOH 88 379 379 HOH HOH E . D 4 HOH 89 380 380 HOH HOH E . D 4 HOH 90 381 381 HOH HOH E . D 4 HOH 91 382 382 HOH HOH E . D 4 HOH 92 383 383 HOH HOH E . D 4 HOH 93 384 384 HOH HOH E . D 4 HOH 94 385 385 HOH HOH E . D 4 HOH 95 386 386 HOH HOH E . D 4 HOH 96 387 387 HOH HOH E . D 4 HOH 97 388 388 HOH HOH E . D 4 HOH 98 389 389 HOH HOH E . D 4 HOH 99 390 390 HOH HOH E . D 4 HOH 100 391 391 HOH HOH E . D 4 HOH 101 392 392 HOH HOH E . D 4 HOH 102 393 393 HOH HOH E . D 4 HOH 103 394 394 HOH HOH E . D 4 HOH 104 395 395 HOH HOH E . D 4 HOH 105 396 396 HOH HOH E . D 4 HOH 106 397 397 HOH HOH E . D 4 HOH 107 398 398 HOH HOH E . D 4 HOH 108 399 399 HOH HOH E . D 4 HOH 109 400 400 HOH HOH E . D 4 HOH 110 401 401 HOH HOH E . D 4 HOH 111 402 402 HOH HOH E . D 4 HOH 112 403 403 HOH HOH E . D 4 HOH 113 404 404 HOH HOH E . D 4 HOH 114 405 405 HOH HOH E . D 4 HOH 115 406 406 HOH HOH E . D 4 HOH 116 407 407 HOH HOH E . D 4 HOH 117 408 408 HOH HOH E . D 4 HOH 118 409 409 HOH HOH E . D 4 HOH 119 410 410 HOH HOH E . D 4 HOH 120 411 411 HOH HOH E . D 4 HOH 121 412 412 HOH HOH E . D 4 HOH 122 413 413 HOH HOH E . D 4 HOH 123 414 414 HOH HOH E . D 4 HOH 124 415 415 HOH HOH E . D 4 HOH 125 416 416 HOH HOH E . D 4 HOH 126 417 417 HOH HOH E . D 4 HOH 127 418 418 HOH HOH E . D 4 HOH 128 419 419 HOH HOH E . D 4 HOH 129 420 420 HOH HOH E . D 4 HOH 130 421 421 HOH HOH E . D 4 HOH 131 422 422 HOH HOH E . D 4 HOH 132 423 423 HOH HOH E . D 4 HOH 133 424 424 HOH HOH E . D 4 HOH 134 425 425 HOH HOH E . D 4 HOH 135 426 426 HOH HOH E . D 4 HOH 136 427 427 HOH HOH E . D 4 HOH 137 428 428 HOH HOH E . D 4 HOH 138 429 429 HOH HOH E . D 4 HOH 139 430 430 HOH HOH E . D 4 HOH 140 431 431 HOH HOH E . D 4 HOH 141 432 432 HOH HOH E . D 4 HOH 142 433 433 HOH HOH E . D 4 HOH 143 434 434 HOH HOH E . D 4 HOH 144 435 435 HOH HOH E . D 4 HOH 145 436 436 HOH HOH E . D 4 HOH 146 437 437 HOH HOH E . D 4 HOH 147 438 438 HOH HOH E . D 4 HOH 148 439 439 HOH HOH E . D 4 HOH 149 440 440 HOH HOH E . D 4 HOH 150 441 441 HOH HOH E . D 4 HOH 151 442 442 HOH HOH E . D 4 HOH 152 443 443 HOH HOH E . D 4 HOH 153 444 444 HOH HOH E . D 4 HOH 154 445 445 HOH HOH E . D 4 HOH 155 446 446 HOH HOH E . D 4 HOH 156 447 447 HOH HOH E . D 4 HOH 157 450 450 HOH HOH E . D 4 HOH 158 451 451 HOH HOH E . D 4 HOH 159 454 454 HOH HOH E . D 4 HOH 160 456 456 HOH HOH E . D 4 HOH 161 458 458 HOH HOH E . D 4 HOH 162 459 459 HOH HOH E . D 4 HOH 163 460 460 HOH HOH E . D 4 HOH 164 461 461 HOH HOH E . E 4 HOH 1 448 448 HOH HOH I . E 4 HOH 2 449 449 HOH HOH I . E 4 HOH 3 452 452 HOH HOH I . E 4 HOH 4 453 453 HOH HOH I . E 4 HOH 5 455 455 HOH HOH I . E 4 HOH 6 457 457 HOH HOH I . # _pdbx_molecule_features.prd_id PRD_000402 _pdbx_molecule_features.name 'methoxysuccinyl-alanyl-alanyl-prolyl-alanine chloromethyl ketone' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000402 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1030 ? 1 MORE -16 ? 1 'SSA (A^2)' 10150 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 E HOH 313 ? D HOH . 2 1 E HOH 430 ? D HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 293 ? 1_555 75.9 ? 2 OD1 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 295 ? 1_555 72.3 ? 3 O ? D HOH . ? E HOH 293 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 295 ? 1_555 67.8 ? 4 OD1 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 OD2 ? A ASP 200 ? E ASP 200 ? 1_555 52.4 ? 5 O ? D HOH . ? E HOH 293 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 OD2 ? A ASP 200 ? E ASP 200 ? 1_555 128.3 ? 6 O ? D HOH . ? E HOH 295 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 OD2 ? A ASP 200 ? E ASP 200 ? 1_555 92.3 ? 7 OD1 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A PRO 175 ? E PRO 175 ? 1_555 153.5 ? 8 O ? D HOH . ? E HOH 293 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A PRO 175 ? E PRO 175 ? 1_555 78.1 ? 9 O ? D HOH . ? E HOH 295 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A PRO 175 ? E PRO 175 ? 1_555 93.3 ? 10 OD2 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A PRO 175 ? E PRO 175 ? 1_555 152.9 ? 11 OD1 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A VAL 177 ? E VAL 177 ? 1_555 116.4 ? 12 O ? D HOH . ? E HOH 293 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A VAL 177 ? E VAL 177 ? 1_555 146.7 ? 13 O ? D HOH . ? E HOH 295 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A VAL 177 ? E VAL 177 ? 1_555 144.1 ? 14 OD2 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A VAL 177 ? E VAL 177 ? 1_555 71.9 ? 15 O ? A PRO 175 ? E PRO 175 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? A VAL 177 ? E VAL 177 ? 1_555 88.4 ? 16 OD1 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 294 ? 1_555 84.0 ? 17 O ? D HOH . ? E HOH 293 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 294 ? 1_555 77.2 ? 18 O ? D HOH . ? E HOH 295 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 294 ? 1_555 141.4 ? 19 OD2 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 294 ? 1_555 96.9 ? 20 O ? A PRO 175 ? E PRO 175 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 294 ? 1_555 95.2 ? 21 O ? A VAL 177 ? E VAL 177 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 294 ? 1_555 73.8 ? 22 OD1 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 296 ? 1_555 115.7 ? 23 O ? D HOH . ? E HOH 293 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 296 ? 1_555 134.8 ? 24 O ? D HOH . ? E HOH 295 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 296 ? 1_555 74.6 ? 25 OD2 ? A ASP 200 ? E ASP 200 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 296 ? 1_555 76.1 ? 26 O ? A PRO 175 ? E PRO 175 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 296 ? 1_555 79.9 ? 27 O ? A VAL 177 ? E VAL 177 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 296 ? 1_555 70.4 ? 28 O ? D HOH . ? E HOH 294 ? 1_555 CA ? C CA . ? E CA 500 ? 1_555 O ? D HOH . ? E HOH 296 ? 1_555 144.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-01-31 2 'Structure model' 1 1 2008-03-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2017-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_database_status 2 5 'Structure model' struct_conf 3 5 'Structure model' struct_conf_type # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 5 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_database_status.process_site' # _software.name TNT _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 3PRK _pdbx_entry_details.compound_details ;THE CHLOROMETHYLKETONE GROUP IS COVALENTLY LINKED WITH THE ACTIVE SITE FUNCTIONAL GROUPS NE2 HIS E 69 AND OG SER E 224. THE FORMER HAS SUBSTITUTED FOR CHLORINE AND THE LATTER HAS ATTACKED THE CARBON OF THE KETONE GROUP, THEREBY FORMING THE TETRAHEDRAL CARBON ATOM OF THE TRANSITION STATE ANALOG. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 E _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 224 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 I _pdbx_validate_close_contact.auth_comp_id_2 ALV _pdbx_validate_close_contact.auth_seq_id_2 284 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD E GLU 27 ? ? OE2 E GLU 27 ? ? 1.324 1.252 0.072 0.011 N 2 1 CD E GLU 174 ? ? OE1 E GLU 174 ? ? 1.322 1.252 0.070 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB E ASP 26 ? ? CG E ASP 26 ? ? OD1 E ASP 26 ? ? 112.78 118.30 -5.52 0.90 N 2 1 CB E ASP 39 ? ? CG E ASP 39 ? ? OD1 E ASP 39 ? ? 112.42 118.30 -5.88 0.90 N 3 1 CB E ASP 39 ? ? CG E ASP 39 ? ? OD2 E ASP 39 ? ? 124.40 118.30 6.10 0.90 N 4 1 NE E ARG 147 ? ? CZ E ARG 147 ? ? NH2 E ARG 147 ? ? 115.27 120.30 -5.03 0.50 N 5 1 CB E ASP 184 ? ? CG E ASP 184 ? ? OD1 E ASP 184 ? ? 124.88 118.30 6.58 0.90 N 6 1 CB E ASP 184 ? ? CG E ASP 184 ? ? OD2 E ASP 184 ? ? 111.85 118.30 -6.45 0.90 N 7 1 CB E ASP 187 ? ? CG E ASP 187 ? ? OD1 E ASP 187 ? ? 112.87 118.30 -5.43 0.90 N 8 1 CB E ASP 200 ? ? CG E ASP 200 ? ? OD1 E ASP 200 ? ? 110.75 118.30 -7.55 0.90 N 9 1 CB E ASP 200 ? ? CG E ASP 200 ? ? OD2 E ASP 200 ? ? 125.88 118.30 7.58 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP E 39 ? ? -157.51 -130.21 2 1 ASN E 270 ? ? -113.60 74.79 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 E GLN 103 ? CG ? A GLN 103 CG 2 1 Y 1 E GLN 103 ? CD ? A GLN 103 CD 3 1 Y 1 E GLN 103 ? OE1 ? A GLN 103 OE1 4 1 Y 1 E GLN 103 ? NE2 ? A GLN 103 NE2 5 1 Y 1 E GLN 278 ? CG ? A GLN 278 CG 6 1 Y 1 E GLN 278 ? CD ? A GLN 278 CD 7 1 Y 1 E GLN 278 ? OE1 ? A GLN 278 OE1 8 1 Y 1 E GLN 278 ? NE2 ? A GLN 278 NE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH #