data_3PVX # _entry.id 3PVX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3PVX pdb_00003pvx 10.2210/pdb3pvx/pdb NDB NA0910 ? ? RCSB RCSB062876 ? ? WWPDB D_1000062876 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-10 2 'Structure model' 1 1 2011-09-21 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.value' 18 3 'Structure model' '_struct_conn.pdbx_dist_value' 19 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 3 'Structure model' '_struct_ref_seq_dif.details' 32 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _database_PDB_caveat.id 1 _database_PDB_caveat.text ;CHILARLITY ERRORS AT C3' ATOM IN RESIDUES B371, B372 ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PVX _pdbx_database_status.recvd_initial_deposition_date 2010-12-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3PW0 . unspecified PDB 3PW2 . unspecified PDB 3PW4 . unspecified PDB 3PW5 . unspecified PDB 3PW7 . unspecified # _audit_author.name 'Banerjee, S.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 133 _citation.page_first 12556 _citation.page_last 12568 _citation.year 2011 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21790157 _citation.pdbx_database_id_DOI 10.1021/ja2015668 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banerjee, S.' 1 ? primary 'Brown, K.L.' 2 ? primary 'Egli, M.' 3 ? primary 'Stone, M.P.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase IV' 39848.398 1 2.7.7.7 ? 'UNP residues 1-341' ? 2 polymer syn ;DNA (5'-D(*AP*TP*TP*(PVX)P*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') ; 5113.377 1 ? ? ? 'Modified DNA Template' 3 polymer syn ;DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3') ; 4096.670 1 ? ? ? 'DNA Primer' 4 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 5 water nat water 18.015 83 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol IV' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYL PMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIA ADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYN EPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSE SVKLLQKILEEDERKIRRIGVRFSKFI ; ;HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYL PMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIA ADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYN EPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSE SVKLLQKILEEDERKIRRIGVRFSKFI ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DT)(DT)(PVX)(DA)(DA)(DT)(DC)(DC)(DT)(DT)(DC)(DC)(DC)(DC)(DC)' ATTXAATCCTTCCCCC B ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DG)(DG)(DG)(DA)(DA)(DG)(DG)(DA)(DT)(DT)(DC)' GGGGGAAGGATTC C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 MET n 1 8 ILE n 1 9 VAL n 1 10 LEU n 1 11 PHE n 1 12 VAL n 1 13 ASP n 1 14 PHE n 1 15 ASP n 1 16 TYR n 1 17 PHE n 1 18 TYR n 1 19 ALA n 1 20 GLN n 1 21 VAL n 1 22 GLU n 1 23 GLU n 1 24 VAL n 1 25 LEU n 1 26 ASN n 1 27 PRO n 1 28 SER n 1 29 LEU n 1 30 LYS n 1 31 GLY n 1 32 LYS n 1 33 PRO n 1 34 VAL n 1 35 VAL n 1 36 VAL n 1 37 CYS n 1 38 VAL n 1 39 PHE n 1 40 SER n 1 41 GLY n 1 42 ARG n 1 43 PHE n 1 44 GLU n 1 45 ASP n 1 46 SER n 1 47 GLY n 1 48 ALA n 1 49 VAL n 1 50 ALA n 1 51 THR n 1 52 ALA n 1 53 ASN n 1 54 TYR n 1 55 GLU n 1 56 ALA n 1 57 ARG n 1 58 LYS n 1 59 PHE n 1 60 GLY n 1 61 VAL n 1 62 LYS n 1 63 ALA n 1 64 GLY n 1 65 ILE n 1 66 PRO n 1 67 ILE n 1 68 VAL n 1 69 GLU n 1 70 ALA n 1 71 LYS n 1 72 LYS n 1 73 ILE n 1 74 LEU n 1 75 PRO n 1 76 ASN n 1 77 ALA n 1 78 VAL n 1 79 TYR n 1 80 LEU n 1 81 PRO n 1 82 MET n 1 83 ARG n 1 84 LYS n 1 85 GLU n 1 86 VAL n 1 87 TYR n 1 88 GLN n 1 89 GLN n 1 90 VAL n 1 91 SER n 1 92 SER n 1 93 ARG n 1 94 ILE n 1 95 MET n 1 96 ASN n 1 97 LEU n 1 98 LEU n 1 99 ARG n 1 100 GLU n 1 101 TYR n 1 102 SER n 1 103 GLU n 1 104 LYS n 1 105 ILE n 1 106 GLU n 1 107 ILE n 1 108 ALA n 1 109 SER n 1 110 ILE n 1 111 ASP n 1 112 GLU n 1 113 ALA n 1 114 TYR n 1 115 LEU n 1 116 ASP n 1 117 ILE n 1 118 SER n 1 119 ASP n 1 120 LYS n 1 121 VAL n 1 122 ARG n 1 123 ASP n 1 124 TYR n 1 125 ARG n 1 126 GLU n 1 127 ALA n 1 128 TYR n 1 129 ASN n 1 130 LEU n 1 131 GLY n 1 132 LEU n 1 133 GLU n 1 134 ILE n 1 135 LYS n 1 136 ASN n 1 137 LYS n 1 138 ILE n 1 139 LEU n 1 140 GLU n 1 141 LYS n 1 142 GLU n 1 143 LYS n 1 144 ILE n 1 145 THR n 1 146 VAL n 1 147 THR n 1 148 VAL n 1 149 GLY n 1 150 ILE n 1 151 SER n 1 152 LYS n 1 153 ASN n 1 154 LYS n 1 155 VAL n 1 156 PHE n 1 157 ALA n 1 158 LYS n 1 159 ILE n 1 160 ALA n 1 161 ALA n 1 162 ASP n 1 163 MET n 1 164 ALA n 1 165 LYS n 1 166 PRO n 1 167 ASN n 1 168 GLY n 1 169 ILE n 1 170 LYS n 1 171 VAL n 1 172 ILE n 1 173 ASP n 1 174 ASP n 1 175 GLU n 1 176 GLU n 1 177 VAL n 1 178 LYS n 1 179 ARG n 1 180 LEU n 1 181 ILE n 1 182 ARG n 1 183 GLU n 1 184 LEU n 1 185 ASP n 1 186 ILE n 1 187 ALA n 1 188 ASP n 1 189 VAL n 1 190 PRO n 1 191 GLY n 1 192 ILE n 1 193 GLY n 1 194 ASN n 1 195 ILE n 1 196 THR n 1 197 ALA n 1 198 GLU n 1 199 LYS n 1 200 LEU n 1 201 LYS n 1 202 LYS n 1 203 LEU n 1 204 GLY n 1 205 ILE n 1 206 ASN n 1 207 LYS n 1 208 LEU n 1 209 VAL n 1 210 ASP n 1 211 THR n 1 212 LEU n 1 213 SER n 1 214 ILE n 1 215 GLU n 1 216 PHE n 1 217 ASP n 1 218 LYS n 1 219 LEU n 1 220 LYS n 1 221 GLY n 1 222 MET n 1 223 ILE n 1 224 GLY n 1 225 GLU n 1 226 ALA n 1 227 LYS n 1 228 ALA n 1 229 LYS n 1 230 TYR n 1 231 LEU n 1 232 ILE n 1 233 SER n 1 234 LEU n 1 235 ALA n 1 236 ARG n 1 237 ASP n 1 238 GLU n 1 239 TYR n 1 240 ASN n 1 241 GLU n 1 242 PRO n 1 243 ILE n 1 244 ARG n 1 245 THR n 1 246 ARG n 1 247 VAL n 1 248 ARG n 1 249 LYS n 1 250 SER n 1 251 ILE n 1 252 GLY n 1 253 ARG n 1 254 ILE n 1 255 VAL n 1 256 THR n 1 257 MET n 1 258 LYS n 1 259 ARG n 1 260 ASN n 1 261 SER n 1 262 ARG n 1 263 ASN n 1 264 LEU n 1 265 GLU n 1 266 GLU n 1 267 ILE n 1 268 LYS n 1 269 PRO n 1 270 TYR n 1 271 LEU n 1 272 PHE n 1 273 ARG n 1 274 ALA n 1 275 ILE n 1 276 GLU n 1 277 GLU n 1 278 SER n 1 279 TYR n 1 280 TYR n 1 281 LYS n 1 282 LEU n 1 283 ASP n 1 284 LYS n 1 285 ARG n 1 286 ILE n 1 287 PRO n 1 288 LYS n 1 289 ALA n 1 290 ILE n 1 291 HIS n 1 292 VAL n 1 293 VAL n 1 294 ALA n 1 295 VAL n 1 296 THR n 1 297 GLU n 1 298 ASP n 1 299 LEU n 1 300 ASP n 1 301 ILE n 1 302 VAL n 1 303 SER n 1 304 ARG n 1 305 GLY n 1 306 ARG n 1 307 THR n 1 308 PHE n 1 309 PRO n 1 310 HIS n 1 311 GLY n 1 312 ILE n 1 313 SER n 1 314 LYS n 1 315 GLU n 1 316 THR n 1 317 ALA n 1 318 TYR n 1 319 SER n 1 320 GLU n 1 321 SER n 1 322 VAL n 1 323 LYS n 1 324 LEU n 1 325 LEU n 1 326 GLN n 1 327 LYS n 1 328 ILE n 1 329 LEU n 1 330 GLU n 1 331 GLU n 1 332 ASP n 1 333 GLU n 1 334 ARG n 1 335 LYS n 1 336 ILE n 1 337 ARG n 1 338 ARG n 1 339 ILE n 1 340 GLY n 1 341 VAL n 1 342 ARG n 1 343 PHE n 1 344 SER n 1 345 LYS n 1 346 PHE n 1 347 ILE n 2 1 DA n 2 2 DT n 2 3 DT n 2 4 PVX n 2 5 DA n 2 6 DA n 2 7 DT n 2 8 DC n 2 9 DC n 2 10 DT n 2 11 DT n 2 12 DC n 2 13 DC n 2 14 DC n 2 15 DC n 2 16 DC n 3 1 DG n 3 2 DG n 3 3 DG n 3 4 DG n 3 5 DG n 3 6 DA n 3 7 DA n 3 8 DG n 3 9 DG n 3 10 DA n 3 11 DT n 3 12 DT n 3 13 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dbh, dpo4, SSO2448' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? 32630 ? 3 1 sample ? ? ? ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PVX 'DNA linking' n ;N-(2-amino-5-{formyl[(6aS,8R,9R,9aR)-9-hydroxy-4-methoxy-1,11-dioxo-1,6a,8,9,9a,11-hexahydrocyclopenta[c]furo[3',2':4,5]furo[2,3-h]chromen-8-yl]amino}-6-oxo-1,6-dihydropyrimidin-4-yl)-2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosylamine ; ? 'C27 H26 N5 O15 P' 691.494 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -5 ? ? ? A . n A 1 2 HIS 2 -4 ? ? ? A . n A 1 3 HIS 3 -3 ? ? ? A . n A 1 4 HIS 4 -2 ? ? ? A . n A 1 5 HIS 5 -1 ? ? ? A . n A 1 6 HIS 6 0 ? ? ? A . n A 1 7 MET 7 1 1 MET MET A . n A 1 8 ILE 8 2 2 ILE ILE A . n A 1 9 VAL 9 3 3 VAL VAL A . n A 1 10 LEU 10 4 4 LEU LEU A . n A 1 11 PHE 11 5 5 PHE PHE A . n A 1 12 VAL 12 6 6 VAL VAL A . n A 1 13 ASP 13 7 7 ASP ASP A . n A 1 14 PHE 14 8 8 PHE PHE A . n A 1 15 ASP 15 9 9 ASP ASP A . n A 1 16 TYR 16 10 10 TYR TYR A . n A 1 17 PHE 17 11 11 PHE PHE A . n A 1 18 TYR 18 12 12 TYR TYR A . n A 1 19 ALA 19 13 13 ALA ALA A . n A 1 20 GLN 20 14 14 GLN GLN A . n A 1 21 VAL 21 15 15 VAL VAL A . n A 1 22 GLU 22 16 16 GLU GLU A . n A 1 23 GLU 23 17 17 GLU GLU A . n A 1 24 VAL 24 18 18 VAL VAL A . n A 1 25 LEU 25 19 19 LEU LEU A . n A 1 26 ASN 26 20 20 ASN ASN A . n A 1 27 PRO 27 21 21 PRO PRO A . n A 1 28 SER 28 22 22 SER SER A . n A 1 29 LEU 29 23 23 LEU LEU A . n A 1 30 LYS 30 24 24 LYS LYS A . n A 1 31 GLY 31 25 25 GLY GLY A . n A 1 32 LYS 32 26 26 LYS LYS A . n A 1 33 PRO 33 27 27 PRO PRO A . n A 1 34 VAL 34 28 28 VAL VAL A . n A 1 35 VAL 35 29 29 VAL VAL A . n A 1 36 VAL 36 30 30 VAL VAL A . n A 1 37 CYS 37 31 31 CYS CYS A . n A 1 38 VAL 38 32 32 VAL VAL A . n A 1 39 PHE 39 33 33 PHE PHE A . n A 1 40 SER 40 34 34 SER SER A . n A 1 41 GLY 41 35 35 GLY GLY A . n A 1 42 ARG 42 36 36 ARG ARG A . n A 1 43 PHE 43 37 37 PHE PHE A . n A 1 44 GLU 44 38 38 GLU GLU A . n A 1 45 ASP 45 39 39 ASP ASP A . n A 1 46 SER 46 40 40 SER SER A . n A 1 47 GLY 47 41 41 GLY GLY A . n A 1 48 ALA 48 42 42 ALA ALA A . n A 1 49 VAL 49 43 43 VAL VAL A . n A 1 50 ALA 50 44 44 ALA ALA A . n A 1 51 THR 51 45 45 THR THR A . n A 1 52 ALA 52 46 46 ALA ALA A . n A 1 53 ASN 53 47 47 ASN ASN A . n A 1 54 TYR 54 48 48 TYR TYR A . n A 1 55 GLU 55 49 49 GLU GLU A . n A 1 56 ALA 56 50 50 ALA ALA A . n A 1 57 ARG 57 51 51 ARG ARG A . n A 1 58 LYS 58 52 52 LYS LYS A . n A 1 59 PHE 59 53 53 PHE PHE A . n A 1 60 GLY 60 54 54 GLY GLY A . n A 1 61 VAL 61 55 55 VAL VAL A . n A 1 62 LYS 62 56 56 LYS LYS A . n A 1 63 ALA 63 57 57 ALA ALA A . n A 1 64 GLY 64 58 58 GLY GLY A . n A 1 65 ILE 65 59 59 ILE ILE A . n A 1 66 PRO 66 60 60 PRO PRO A . n A 1 67 ILE 67 61 61 ILE ILE A . n A 1 68 VAL 68 62 62 VAL VAL A . n A 1 69 GLU 69 63 63 GLU GLU A . n A 1 70 ALA 70 64 64 ALA ALA A . n A 1 71 LYS 71 65 65 LYS LYS A . n A 1 72 LYS 72 66 66 LYS LYS A . n A 1 73 ILE 73 67 67 ILE ILE A . n A 1 74 LEU 74 68 68 LEU LEU A . n A 1 75 PRO 75 69 69 PRO PRO A . n A 1 76 ASN 76 70 70 ASN ASN A . n A 1 77 ALA 77 71 71 ALA ALA A . n A 1 78 VAL 78 72 72 VAL VAL A . n A 1 79 TYR 79 73 73 TYR TYR A . n A 1 80 LEU 80 74 74 LEU LEU A . n A 1 81 PRO 81 75 75 PRO PRO A . n A 1 82 MET 82 76 76 MET MET A . n A 1 83 ARG 83 77 77 ARG ARG A . n A 1 84 LYS 84 78 78 LYS LYS A . n A 1 85 GLU 85 79 79 GLU GLU A . n A 1 86 VAL 86 80 80 VAL VAL A . n A 1 87 TYR 87 81 81 TYR TYR A . n A 1 88 GLN 88 82 82 GLN GLN A . n A 1 89 GLN 89 83 83 GLN GLN A . n A 1 90 VAL 90 84 84 VAL VAL A . n A 1 91 SER 91 85 85 SER SER A . n A 1 92 SER 92 86 86 SER SER A . n A 1 93 ARG 93 87 87 ARG ARG A . n A 1 94 ILE 94 88 88 ILE ILE A . n A 1 95 MET 95 89 89 MET MET A . n A 1 96 ASN 96 90 90 ASN ASN A . n A 1 97 LEU 97 91 91 LEU LEU A . n A 1 98 LEU 98 92 92 LEU LEU A . n A 1 99 ARG 99 93 93 ARG ARG A . n A 1 100 GLU 100 94 94 GLU GLU A . n A 1 101 TYR 101 95 95 TYR TYR A . n A 1 102 SER 102 96 96 SER SER A . n A 1 103 GLU 103 97 97 GLU GLU A . n A 1 104 LYS 104 98 98 LYS LYS A . n A 1 105 ILE 105 99 99 ILE ILE A . n A 1 106 GLU 106 100 100 GLU GLU A . n A 1 107 ILE 107 101 101 ILE ILE A . n A 1 108 ALA 108 102 102 ALA ALA A . n A 1 109 SER 109 103 103 SER SER A . n A 1 110 ILE 110 104 104 ILE ILE A . n A 1 111 ASP 111 105 105 ASP ASP A . n A 1 112 GLU 112 106 106 GLU GLU A . n A 1 113 ALA 113 107 107 ALA ALA A . n A 1 114 TYR 114 108 108 TYR TYR A . n A 1 115 LEU 115 109 109 LEU LEU A . n A 1 116 ASP 116 110 110 ASP ASP A . n A 1 117 ILE 117 111 111 ILE ILE A . n A 1 118 SER 118 112 112 SER SER A . n A 1 119 ASP 119 113 113 ASP ASP A . n A 1 120 LYS 120 114 114 LYS LYS A . n A 1 121 VAL 121 115 115 VAL VAL A . n A 1 122 ARG 122 116 116 ARG ARG A . n A 1 123 ASP 123 117 117 ASP ASP A . n A 1 124 TYR 124 118 118 TYR TYR A . n A 1 125 ARG 125 119 119 ARG ARG A . n A 1 126 GLU 126 120 120 GLU GLU A . n A 1 127 ALA 127 121 121 ALA ALA A . n A 1 128 TYR 128 122 122 TYR TYR A . n A 1 129 ASN 129 123 123 ASN ASN A . n A 1 130 LEU 130 124 124 LEU LEU A . n A 1 131 GLY 131 125 125 GLY GLY A . n A 1 132 LEU 132 126 126 LEU LEU A . n A 1 133 GLU 133 127 127 GLU GLU A . n A 1 134 ILE 134 128 128 ILE ILE A . n A 1 135 LYS 135 129 129 LYS LYS A . n A 1 136 ASN 136 130 130 ASN ASN A . n A 1 137 LYS 137 131 131 LYS LYS A . n A 1 138 ILE 138 132 132 ILE ILE A . n A 1 139 LEU 139 133 133 LEU LEU A . n A 1 140 GLU 140 134 134 GLU GLU A . n A 1 141 LYS 141 135 135 LYS LYS A . n A 1 142 GLU 142 136 136 GLU GLU A . n A 1 143 LYS 143 137 137 LYS LYS A . n A 1 144 ILE 144 138 138 ILE ILE A . n A 1 145 THR 145 139 139 THR THR A . n A 1 146 VAL 146 140 140 VAL VAL A . n A 1 147 THR 147 141 141 THR THR A . n A 1 148 VAL 148 142 142 VAL VAL A . n A 1 149 GLY 149 143 143 GLY GLY A . n A 1 150 ILE 150 144 144 ILE ILE A . n A 1 151 SER 151 145 145 SER SER A . n A 1 152 LYS 152 146 146 LYS LYS A . n A 1 153 ASN 153 147 147 ASN ASN A . n A 1 154 LYS 154 148 148 LYS LYS A . n A 1 155 VAL 155 149 149 VAL VAL A . n A 1 156 PHE 156 150 150 PHE PHE A . n A 1 157 ALA 157 151 151 ALA ALA A . n A 1 158 LYS 158 152 152 LYS LYS A . n A 1 159 ILE 159 153 153 ILE ILE A . n A 1 160 ALA 160 154 154 ALA ALA A . n A 1 161 ALA 161 155 155 ALA ALA A . n A 1 162 ASP 162 156 156 ASP ASP A . n A 1 163 MET 163 157 157 MET MET A . n A 1 164 ALA 164 158 158 ALA ALA A . n A 1 165 LYS 165 159 159 LYS LYS A . n A 1 166 PRO 166 160 160 PRO PRO A . n A 1 167 ASN 167 161 161 ASN ASN A . n A 1 168 GLY 168 162 162 GLY GLY A . n A 1 169 ILE 169 163 163 ILE ILE A . n A 1 170 LYS 170 164 164 LYS LYS A . n A 1 171 VAL 171 165 165 VAL VAL A . n A 1 172 ILE 172 166 166 ILE ILE A . n A 1 173 ASP 173 167 167 ASP ASP A . n A 1 174 ASP 174 168 168 ASP ASP A . n A 1 175 GLU 175 169 169 GLU GLU A . n A 1 176 GLU 176 170 170 GLU GLU A . n A 1 177 VAL 177 171 171 VAL VAL A . n A 1 178 LYS 178 172 172 LYS LYS A . n A 1 179 ARG 179 173 173 ARG ARG A . n A 1 180 LEU 180 174 174 LEU LEU A . n A 1 181 ILE 181 175 175 ILE ILE A . n A 1 182 ARG 182 176 176 ARG ARG A . n A 1 183 GLU 183 177 177 GLU GLU A . n A 1 184 LEU 184 178 178 LEU LEU A . n A 1 185 ASP 185 179 179 ASP ASP A . n A 1 186 ILE 186 180 180 ILE ILE A . n A 1 187 ALA 187 181 181 ALA ALA A . n A 1 188 ASP 188 182 182 ASP ASP A . n A 1 189 VAL 189 183 183 VAL VAL A . n A 1 190 PRO 190 184 184 PRO PRO A . n A 1 191 GLY 191 185 185 GLY GLY A . n A 1 192 ILE 192 186 186 ILE ILE A . n A 1 193 GLY 193 187 187 GLY GLY A . n A 1 194 ASN 194 188 188 ASN ASN A . n A 1 195 ILE 195 189 189 ILE ILE A . n A 1 196 THR 196 190 190 THR THR A . n A 1 197 ALA 197 191 191 ALA ALA A . n A 1 198 GLU 198 192 192 GLU GLU A . n A 1 199 LYS 199 193 193 LYS LYS A . n A 1 200 LEU 200 194 194 LEU LEU A . n A 1 201 LYS 201 195 195 LYS LYS A . n A 1 202 LYS 202 196 196 LYS LYS A . n A 1 203 LEU 203 197 197 LEU LEU A . n A 1 204 GLY 204 198 198 GLY GLY A . n A 1 205 ILE 205 199 199 ILE ILE A . n A 1 206 ASN 206 200 200 ASN ASN A . n A 1 207 LYS 207 201 201 LYS LYS A . n A 1 208 LEU 208 202 202 LEU LEU A . n A 1 209 VAL 209 203 203 VAL VAL A . n A 1 210 ASP 210 204 204 ASP ASP A . n A 1 211 THR 211 205 205 THR THR A . n A 1 212 LEU 212 206 206 LEU LEU A . n A 1 213 SER 213 207 207 SER SER A . n A 1 214 ILE 214 208 208 ILE ILE A . n A 1 215 GLU 215 209 209 GLU GLU A . n A 1 216 PHE 216 210 210 PHE PHE A . n A 1 217 ASP 217 211 211 ASP ASP A . n A 1 218 LYS 218 212 212 LYS LYS A . n A 1 219 LEU 219 213 213 LEU LEU A . n A 1 220 LYS 220 214 214 LYS LYS A . n A 1 221 GLY 221 215 215 GLY GLY A . n A 1 222 MET 222 216 216 MET MET A . n A 1 223 ILE 223 217 217 ILE ILE A . n A 1 224 GLY 224 218 218 GLY GLY A . n A 1 225 GLU 225 219 219 GLU GLU A . n A 1 226 ALA 226 220 220 ALA ALA A . n A 1 227 LYS 227 221 221 LYS LYS A . n A 1 228 ALA 228 222 222 ALA ALA A . n A 1 229 LYS 229 223 223 LYS LYS A . n A 1 230 TYR 230 224 224 TYR TYR A . n A 1 231 LEU 231 225 225 LEU LEU A . n A 1 232 ILE 232 226 226 ILE ILE A . n A 1 233 SER 233 227 227 SER SER A . n A 1 234 LEU 234 228 228 LEU LEU A . n A 1 235 ALA 235 229 229 ALA ALA A . n A 1 236 ARG 236 230 230 ARG ARG A . n A 1 237 ASP 237 231 231 ASP ASP A . n A 1 238 GLU 238 232 232 GLU GLU A . n A 1 239 TYR 239 233 233 TYR TYR A . n A 1 240 ASN 240 234 234 ASN ASN A . n A 1 241 GLU 241 235 235 GLU GLU A . n A 1 242 PRO 242 236 236 PRO PRO A . n A 1 243 ILE 243 237 237 ILE ILE A . n A 1 244 ARG 244 238 238 ARG ARG A . n A 1 245 THR 245 239 239 THR THR A . n A 1 246 ARG 246 240 240 ARG ARG A . n A 1 247 VAL 247 241 241 VAL VAL A . n A 1 248 ARG 248 242 242 ARG ARG A . n A 1 249 LYS 249 243 243 LYS LYS A . n A 1 250 SER 250 244 244 SER SER A . n A 1 251 ILE 251 245 245 ILE ILE A . n A 1 252 GLY 252 246 246 GLY GLY A . n A 1 253 ARG 253 247 247 ARG ARG A . n A 1 254 ILE 254 248 248 ILE ILE A . n A 1 255 VAL 255 249 249 VAL VAL A . n A 1 256 THR 256 250 250 THR THR A . n A 1 257 MET 257 251 251 MET MET A . n A 1 258 LYS 258 252 252 LYS LYS A . n A 1 259 ARG 259 253 253 ARG ARG A . n A 1 260 ASN 260 254 254 ASN ASN A . n A 1 261 SER 261 255 255 SER SER A . n A 1 262 ARG 262 256 256 ARG ARG A . n A 1 263 ASN 263 257 257 ASN ASN A . n A 1 264 LEU 264 258 258 LEU LEU A . n A 1 265 GLU 265 259 259 GLU GLU A . n A 1 266 GLU 266 260 260 GLU GLU A . n A 1 267 ILE 267 261 261 ILE ILE A . n A 1 268 LYS 268 262 262 LYS LYS A . n A 1 269 PRO 269 263 263 PRO PRO A . n A 1 270 TYR 270 264 264 TYR TYR A . n A 1 271 LEU 271 265 265 LEU LEU A . n A 1 272 PHE 272 266 266 PHE PHE A . n A 1 273 ARG 273 267 267 ARG ARG A . n A 1 274 ALA 274 268 268 ALA ALA A . n A 1 275 ILE 275 269 269 ILE ILE A . n A 1 276 GLU 276 270 270 GLU GLU A . n A 1 277 GLU 277 271 271 GLU GLU A . n A 1 278 SER 278 272 272 SER SER A . n A 1 279 TYR 279 273 273 TYR TYR A . n A 1 280 TYR 280 274 274 TYR TYR A . n A 1 281 LYS 281 275 275 LYS LYS A . n A 1 282 LEU 282 276 276 LEU LEU A . n A 1 283 ASP 283 277 277 ASP ASP A . n A 1 284 LYS 284 278 278 LYS LYS A . n A 1 285 ARG 285 279 279 ARG ARG A . n A 1 286 ILE 286 280 280 ILE ILE A . n A 1 287 PRO 287 281 281 PRO PRO A . n A 1 288 LYS 288 282 282 LYS LYS A . n A 1 289 ALA 289 283 283 ALA ALA A . n A 1 290 ILE 290 284 284 ILE ILE A . n A 1 291 HIS 291 285 285 HIS HIS A . n A 1 292 VAL 292 286 286 VAL VAL A . n A 1 293 VAL 293 287 287 VAL VAL A . n A 1 294 ALA 294 288 288 ALA ALA A . n A 1 295 VAL 295 289 289 VAL VAL A . n A 1 296 THR 296 290 290 THR THR A . n A 1 297 GLU 297 291 291 GLU GLU A . n A 1 298 ASP 298 292 292 ASP ASP A . n A 1 299 LEU 299 293 293 LEU LEU A . n A 1 300 ASP 300 294 294 ASP ASP A . n A 1 301 ILE 301 295 295 ILE ILE A . n A 1 302 VAL 302 296 296 VAL VAL A . n A 1 303 SER 303 297 297 SER SER A . n A 1 304 ARG 304 298 298 ARG ARG A . n A 1 305 GLY 305 299 299 GLY GLY A . n A 1 306 ARG 306 300 300 ARG ARG A . n A 1 307 THR 307 301 301 THR THR A . n A 1 308 PHE 308 302 302 PHE PHE A . n A 1 309 PRO 309 303 303 PRO PRO A . n A 1 310 HIS 310 304 304 HIS HIS A . n A 1 311 GLY 311 305 305 GLY GLY A . n A 1 312 ILE 312 306 306 ILE ILE A . n A 1 313 SER 313 307 307 SER SER A . n A 1 314 LYS 314 308 308 LYS LYS A . n A 1 315 GLU 315 309 309 GLU GLU A . n A 1 316 THR 316 310 310 THR THR A . n A 1 317 ALA 317 311 311 ALA ALA A . n A 1 318 TYR 318 312 312 TYR TYR A . n A 1 319 SER 319 313 313 SER SER A . n A 1 320 GLU 320 314 314 GLU GLU A . n A 1 321 SER 321 315 315 SER SER A . n A 1 322 VAL 322 316 316 VAL VAL A . n A 1 323 LYS 323 317 317 LYS LYS A . n A 1 324 LEU 324 318 318 LEU LEU A . n A 1 325 LEU 325 319 319 LEU LEU A . n A 1 326 GLN 326 320 320 GLN GLN A . n A 1 327 LYS 327 321 321 LYS LYS A . n A 1 328 ILE 328 322 322 ILE ILE A . n A 1 329 LEU 329 323 323 LEU LEU A . n A 1 330 GLU 330 324 324 GLU GLU A . n A 1 331 GLU 331 325 325 GLU GLU A . n A 1 332 ASP 332 326 326 ASP ASP A . n A 1 333 GLU 333 327 327 GLU GLU A . n A 1 334 ARG 334 328 328 ARG ARG A . n A 1 335 LYS 335 329 329 LYS LYS A . n A 1 336 ILE 336 330 330 ILE ILE A . n A 1 337 ARG 337 331 331 ARG ARG A . n A 1 338 ARG 338 332 332 ARG ARG A . n A 1 339 ILE 339 333 333 ILE ILE A . n A 1 340 GLY 340 334 334 GLY GLY A . n A 1 341 VAL 341 335 335 VAL VAL A . n A 1 342 ARG 342 336 336 ARG ARG A . n A 1 343 PHE 343 337 337 PHE PHE A . n A 1 344 SER 344 338 338 SER SER A . n A 1 345 LYS 345 339 339 LYS LYS A . n A 1 346 PHE 346 340 340 PHE PHE A . n A 1 347 ILE 347 341 341 ILE ILE A . n B 2 1 DA 1 371 ? ? ? B . n B 2 2 DT 2 372 ? ? ? B . n B 2 3 DT 3 373 373 DT DT B . n B 2 4 PVX 4 374 374 PVX PVX B . n B 2 5 DA 5 375 375 DA DA B . n B 2 6 DA 6 376 376 DA DA B . n B 2 7 DT 7 377 377 DT DT B . n B 2 8 DC 8 378 378 DC DC B . n B 2 9 DC 9 379 379 DC DC B . n B 2 10 DT 10 380 380 DT DT B . n B 2 11 DT 11 381 381 DT DT B . n B 2 12 DC 12 382 382 DC DC B . n B 2 13 DC 13 383 383 DC DC B . n B 2 14 DC 14 384 384 DC DC B . n B 2 15 DC 15 385 385 DC DC B . n B 2 16 DC 16 386 386 DC DC B . n C 3 1 DG 1 347 347 DG DG C . n C 3 2 DG 2 348 348 DG DG C . n C 3 3 DG 3 349 349 DG DG C . n C 3 4 DG 4 350 350 DG DG C . n C 3 5 DG 5 351 351 DG DG C . n C 3 6 DA 6 352 352 DA DA C . n C 3 7 DA 7 353 353 DA DA C . n C 3 8 DG 8 354 354 DG DG C . n C 3 9 DG 9 355 355 DG DG C . n C 3 10 DA 10 356 356 DA DA C . n C 3 11 DT 11 357 357 DT DT C . n C 3 12 DT 12 358 358 DT DT C . n C 3 13 DC 13 359 359 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 1001 1001 CA CA A . E 4 CA 1 1002 1002 CA CA A . F 4 CA 1 1003 1003 CA CA A . G 5 HOH 1 2001 2001 HOH HOH A . G 5 HOH 2 2002 2002 HOH HOH A . G 5 HOH 3 2003 2003 HOH HOH A . G 5 HOH 4 2004 2004 HOH HOH A . G 5 HOH 5 2005 2005 HOH HOH A . G 5 HOH 6 2006 2006 HOH HOH A . G 5 HOH 7 2007 2007 HOH HOH A . G 5 HOH 8 2008 2008 HOH HOH A . G 5 HOH 9 2009 2009 HOH HOH A . G 5 HOH 10 2010 2010 HOH HOH A . G 5 HOH 11 2011 2011 HOH HOH A . G 5 HOH 12 2012 2012 HOH HOH A . G 5 HOH 13 2013 2013 HOH HOH A . G 5 HOH 14 2014 2014 HOH HOH A . G 5 HOH 15 2015 2015 HOH HOH A . G 5 HOH 16 2016 2016 HOH HOH A . G 5 HOH 17 2017 2017 HOH HOH A . G 5 HOH 18 2018 2018 HOH HOH A . G 5 HOH 19 2019 2019 HOH HOH A . G 5 HOH 20 2020 2020 HOH HOH A . G 5 HOH 21 2021 2021 HOH HOH A . G 5 HOH 22 2022 2022 HOH HOH A . G 5 HOH 23 2023 2023 HOH HOH A . G 5 HOH 24 2024 2024 HOH HOH A . G 5 HOH 25 2025 2025 HOH HOH A . G 5 HOH 26 2026 2026 HOH HOH A . G 5 HOH 27 2027 2027 HOH HOH A . G 5 HOH 28 2028 2028 HOH HOH A . G 5 HOH 29 2029 2029 HOH HOH A . G 5 HOH 30 2030 2030 HOH HOH A . G 5 HOH 31 2031 2031 HOH HOH A . G 5 HOH 32 2032 2032 HOH HOH A . G 5 HOH 33 2033 2033 HOH HOH A . G 5 HOH 34 2034 2034 HOH HOH A . G 5 HOH 35 2035 2035 HOH HOH A . G 5 HOH 36 2036 2036 HOH HOH A . G 5 HOH 37 2037 2037 HOH HOH A . G 5 HOH 38 2038 2038 HOH HOH A . G 5 HOH 39 2039 2039 HOH HOH A . G 5 HOH 40 2040 2040 HOH HOH A . G 5 HOH 41 2041 2041 HOH HOH A . G 5 HOH 42 2042 2042 HOH HOH A . G 5 HOH 43 2043 2043 HOH HOH A . G 5 HOH 44 2044 2044 HOH HOH A . G 5 HOH 45 2045 2045 HOH HOH A . G 5 HOH 46 2046 2046 HOH HOH A . G 5 HOH 47 2047 2047 HOH HOH A . G 5 HOH 48 2048 2048 HOH HOH A . G 5 HOH 49 2049 2049 HOH HOH A . G 5 HOH 50 2050 2050 HOH HOH A . G 5 HOH 51 2051 2051 HOH HOH A . G 5 HOH 52 2052 2052 HOH HOH A . G 5 HOH 53 2053 2053 HOH HOH A . G 5 HOH 54 2054 2054 HOH HOH A . G 5 HOH 55 2055 2055 HOH HOH A . G 5 HOH 56 2056 2056 HOH HOH A . G 5 HOH 57 2057 2057 HOH HOH A . G 5 HOH 58 2058 2058 HOH HOH A . G 5 HOH 59 2059 2059 HOH HOH A . G 5 HOH 60 2060 2060 HOH HOH A . G 5 HOH 61 2061 2061 HOH HOH A . G 5 HOH 62 2062 2062 HOH HOH A . G 5 HOH 63 2063 2063 HOH HOH A . H 5 HOH 1 2001 2001 HOH HOH B . H 5 HOH 2 2002 2002 HOH HOH B . H 5 HOH 3 2003 2003 HOH HOH B . H 5 HOH 4 2004 2004 HOH HOH B . H 5 HOH 5 2005 2005 HOH HOH B . H 5 HOH 6 2006 2006 HOH HOH B . H 5 HOH 7 2007 2007 HOH HOH B . H 5 HOH 8 2008 2008 HOH HOH B . H 5 HOH 9 2009 2009 HOH HOH B . H 5 HOH 10 2010 2010 HOH HOH B . H 5 HOH 11 2011 2011 HOH HOH B . H 5 HOH 12 2012 2012 HOH HOH B . H 5 HOH 13 2013 2013 HOH HOH B . H 5 HOH 14 2014 2014 HOH HOH B . I 5 HOH 1 2001 2001 HOH HOH C . I 5 HOH 2 2002 2002 HOH HOH C . I 5 HOH 3 2003 2003 HOH HOH C . I 5 HOH 4 2004 2004 HOH HOH C . I 5 HOH 5 2005 2005 HOH HOH C . I 5 HOH 6 2006 2006 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B DT 373 ? P ? B DT 3 P 2 1 Y 1 B DT 373 ? OP1 ? B DT 3 OP1 3 1 Y 1 B DT 373 ? OP2 ? B DT 3 OP2 # _software.name CNS _software.classification refinement _software.version 1.1 _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 3PVX _cell.length_a 94.752 _cell.length_b 103.905 _cell.length_c 52.890 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PVX _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3PVX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_percent_sol 54.30 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 3PVX _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 27.96 _reflns.d_resolution_high 3.03 _reflns.number_obs 10474 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 38.5 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3PVX _refine.ls_number_reflns_obs 9383 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 159398.82 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.96 _refine.ls_d_res_high 3.03 _refine.ls_percent_reflns_obs 88.5 _refine.ls_R_factor_obs 0.226 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.226 _refine.ls_R_factor_R_free 0.299 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.0 _refine.ls_number_reflns_R_free 752 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 63.6 _refine.aniso_B[1][1] 30.40 _refine.aniso_B[2][2] -7.73 _refine.aniso_B[3][3] -22.67 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.295566 _refine.solvent_model_param_bsol 23.7995 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'RESOLUTION-DEPENDENT WEIGHTING SCHEME USE OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3PVX _refine_analyze.Luzzati_coordinate_error_obs 0.41 _refine_analyze.Luzzati_sigma_a_obs 0.38 _refine_analyze.Luzzati_d_res_low_obs 50.00 _refine_analyze.Luzzati_coordinate_error_free 0.57 _refine_analyze.Luzzati_sigma_a_free 0.48 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2744 _refine_hist.pdbx_number_atoms_nucleic_acid 572 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 3402 _refine_hist.d_res_high 3.03 _refine_hist.d_res_low 27.96 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.9 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.99 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.47 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.62 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.91 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.22 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.03 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work 885 _refine_ls_shell.R_factor_R_work 0.379 _refine_ls_shell.percent_reflns_obs 54.4 _refine_ls_shell.R_factor_R_free 0.458 _refine_ls_shell.R_factor_R_free_error 0.050 _refine_ls_shell.percent_reflns_R_free 8.8 _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_fab_n.param dna-rna_fab_n.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 water_rep.param water.top # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _database_PDB_matrix.entry_id 3PVX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3PVX _struct.title 'Binary complex of Aflatoxin B1 Adduct modified DNA (AFB1-FAPY) with DNA Polymerase IV' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PVX _struct_keywords.pdbx_keywords Transferase/DNA _struct_keywords.text 'DNA Polymerase, DNA Adduct, Transferase-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPO42_SULSO Q97W02 1 ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; 1 ? 2 PDB 3PVX 3PVX 2 ATTXAATCCTTCCCCC ? ? 3 PDB 3PVX 3PVX 3 GGGGGAAGGATTC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PVX A 7 ? 347 ? Q97W02 1 ? 341 ? 1 341 2 2 3PVX B 1 ? 16 ? 3PVX 371 ? 386 ? 371 386 3 3 3PVX C 1 ? 13 ? 3PVX 347 ? 359 ? 347 359 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3PVX HIS A 1 ? UNP Q97W02 ? ? 'expression tag' -5 1 1 3PVX HIS A 2 ? UNP Q97W02 ? ? 'expression tag' -4 2 1 3PVX HIS A 3 ? UNP Q97W02 ? ? 'expression tag' -3 3 1 3PVX HIS A 4 ? UNP Q97W02 ? ? 'expression tag' -2 4 1 3PVX HIS A 5 ? UNP Q97W02 ? ? 'expression tag' -1 5 1 3PVX HIS A 6 ? UNP Q97W02 ? ? 'expression tag' 0 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4590 ? 1 MORE -55 ? 1 'SSA (A^2)' 20800 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 16 ? LEU A 25 ? TYR A 10 LEU A 19 1 ? 10 HELX_P HELX_P2 2 ASN A 26 ? LYS A 30 ? ASN A 20 LYS A 24 5 ? 5 HELX_P HELX_P3 3 ASN A 53 ? LYS A 58 ? ASN A 47 LYS A 52 1 ? 6 HELX_P HELX_P4 4 PRO A 66 ? LEU A 74 ? PRO A 60 LEU A 68 1 ? 9 HELX_P HELX_P5 5 ARG A 83 ? GLU A 100 ? ARG A 77 GLU A 94 1 ? 18 HELX_P HELX_P6 6 ASP A 123 ? LYS A 143 ? ASP A 117 LYS A 137 1 ? 21 HELX_P HELX_P7 7 ASN A 153 ? ALA A 164 ? ASN A 147 ALA A 158 1 ? 12 HELX_P HELX_P8 8 ASP A 173 ? GLU A 183 ? ASP A 167 GLU A 177 1 ? 11 HELX_P HELX_P9 9 ASP A 185 ? VAL A 189 ? ASP A 179 VAL A 183 5 ? 5 HELX_P HELX_P10 10 GLY A 193 ? LEU A 203 ? GLY A 187 LEU A 197 1 ? 11 HELX_P HELX_P11 11 LEU A 208 ? SER A 213 ? LEU A 202 SER A 207 5 ? 6 HELX_P HELX_P12 12 GLU A 215 ? GLY A 224 ? GLU A 209 GLY A 218 1 ? 10 HELX_P HELX_P13 13 GLY A 224 ? ARG A 236 ? GLY A 218 ARG A 230 1 ? 13 HELX_P HELX_P14 14 ASN A 263 ? ASP A 283 ? ASN A 257 ASP A 277 1 ? 21 HELX_P HELX_P15 15 SER A 313 ? GLU A 331 ? SER A 307 GLU A 325 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DT 3 "O3'" ? ? ? 1_555 B PVX 4 P ? ? B DT 373 B PVX 374 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale2 covale both ? B PVX 4 "O3'" ? ? ? 1_555 B DA 5 P ? ? B PVX 374 B DA 375 1_555 ? ? ? ? ? ? ? 1.605 ? ? metalc1 metalc ? ? A PHE 14 O ? ? ? 1_555 D CA . CA ? ? A PHE 8 A CA 1001 1_555 ? ? ? ? ? ? ? 3.085 ? ? metalc2 metalc ? ? A ASP 111 OD2 ? ? ? 1_555 D CA . CA ? ? A ASP 105 A CA 1001 1_555 ? ? ? ? ? ? ? 2.993 ? ? metalc3 metalc ? ? A ALA 187 O ? ? ? 1_555 E CA . CA ? ? A ALA 181 A CA 1002 1_555 ? ? ? ? ? ? ? 2.892 ? ? metalc4 metalc ? ? A ILE 192 O ? ? ? 1_555 E CA . CA ? ? A ILE 186 A CA 1002 1_555 ? ? ? ? ? ? ? 2.901 ? ? metalc5 metalc ? ? A ASP 300 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 294 A CA 1003 1_555 ? ? ? ? ? ? ? 3.043 ? ? metalc6 metalc ? ? D CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1001 A HOH 2024 1_555 ? ? ? ? ? ? ? 3.101 ? ? metalc7 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1002 A HOH 2002 1_555 ? ? ? ? ? ? ? 2.943 ? ? metalc8 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1002 A HOH 2025 1_555 ? ? ? ? ? ? ? 3.110 ? ? metalc9 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1002 A HOH 2026 1_555 ? ? ? ? ? ? ? 3.055 ? ? metalc10 metalc ? ? F CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 1003 A HOH 2027 1_555 ? ? ? ? ? ? ? 3.179 ? ? hydrog1 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 12 N3 ? ? B DA 375 C DT 358 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 12 O4 ? ? B DA 375 C DT 358 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 376 C DT 357 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog4 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 10 N1 ? ? B DT 377 C DA 356 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog5 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 9 N1 ? ? B DC 378 C DG 355 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 9 O6 ? ? B DC 378 C DG 355 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? B DC 378 C DG 355 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 379 C DG 354 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 379 C DG 354 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 379 C DG 354 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 380 C DA 353 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 380 C DA 353 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 381 C DA 352 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 381 C DA 352 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DC 382 C DG 351 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DC 382 C DG 351 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 382 C DG 351 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 383 C DG 350 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 383 C DG 350 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 383 C DG 350 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 14 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 384 C DG 349 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 14 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 384 C DG 349 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 14 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 384 C DG 349 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 385 C DG 348 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 385 C DG 348 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 385 C DG 348 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 386 C DG 347 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 386 C DG 347 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 386 C DG 347 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A PHE 14 ? A PHE 8 ? 1_555 CA ? D CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 111 ? A ASP 105 ? 1_555 81.7 ? 2 O ? A PHE 14 ? A PHE 8 ? 1_555 CA ? D CA . ? A CA 1001 ? 1_555 O ? G HOH . ? A HOH 2024 ? 1_555 85.1 ? 3 OD2 ? A ASP 111 ? A ASP 105 ? 1_555 CA ? D CA . ? A CA 1001 ? 1_555 O ? G HOH . ? A HOH 2024 ? 1_555 83.2 ? 4 O ? A ALA 187 ? A ALA 181 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? A ILE 192 ? A ILE 186 ? 1_555 79.6 ? 5 O ? A ALA 187 ? A ALA 181 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2002 ? 1_555 96.5 ? 6 O ? A ILE 192 ? A ILE 186 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2002 ? 1_555 113.1 ? 7 O ? A ALA 187 ? A ALA 181 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2025 ? 1_555 90.0 ? 8 O ? A ILE 192 ? A ILE 186 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2025 ? 1_555 69.7 ? 9 O ? G HOH . ? A HOH 2002 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2025 ? 1_555 173.3 ? 10 O ? A ALA 187 ? A ALA 181 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2026 ? 1_555 79.4 ? 11 O ? A ILE 192 ? A ILE 186 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2026 ? 1_555 141.7 ? 12 O ? G HOH . ? A HOH 2002 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2026 ? 1_555 100.8 ? 13 O ? G HOH . ? A HOH 2025 ? 1_555 CA ? E CA . ? A CA 1002 ? 1_555 O ? G HOH . ? A HOH 2026 ? 1_555 78.7 ? 14 OD2 ? A ASP 300 ? A ASP 294 ? 1_555 CA ? F CA . ? A CA 1003 ? 1_555 O ? G HOH . ? A HOH 2027 ? 1_555 71.8 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 165 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 159 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 166 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 160 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 105 ? GLU A 106 ? ILE A 99 GLU A 100 A 2 GLU A 112 ? ASP A 116 ? GLU A 106 ASP A 110 A 3 VAL A 9 ? PHE A 14 ? VAL A 3 PHE A 8 A 4 VAL A 146 ? SER A 151 ? VAL A 140 SER A 145 A 5 ILE A 169 ? VAL A 171 ? ILE A 163 VAL A 165 B 1 GLY A 47 ? ALA A 52 ? GLY A 41 ALA A 46 B 2 VAL A 34 ? PHE A 39 ? VAL A 28 PHE A 33 B 3 VAL A 78 ? PRO A 81 ? VAL A 72 PRO A 75 C 1 SER A 250 ? SER A 261 ? SER A 244 SER A 255 C 2 ILE A 336 ? SER A 344 ? ILE A 330 SER A 338 C 3 ALA A 289 ? THR A 296 ? ALA A 283 THR A 290 C 4 ILE A 301 ? THR A 307 ? ILE A 295 THR A 301 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 106 ? N GLU A 100 O TYR A 114 ? O TYR A 108 A 2 3 O ALA A 113 ? O ALA A 107 N VAL A 12 ? N VAL A 6 A 3 4 N PHE A 11 ? N PHE A 5 O GLY A 149 ? O GLY A 143 A 4 5 N ILE A 150 ? N ILE A 144 O LYS A 170 ? O LYS A 164 B 1 2 O THR A 51 ? O THR A 45 N VAL A 36 ? N VAL A 30 B 2 3 N VAL A 35 ? N VAL A 29 O VAL A 78 ? O VAL A 72 C 1 2 N ILE A 251 ? N ILE A 245 O PHE A 343 ? O PHE A 337 C 2 3 O GLY A 340 ? O GLY A 334 N VAL A 293 ? N VAL A 287 C 3 4 N ALA A 294 ? N ALA A 288 O VAL A 302 ? O VAL A 296 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 1001 ? 3 'BINDING SITE FOR RESIDUE CA A 1001' AC2 Software A CA 1002 ? 4 'BINDING SITE FOR RESIDUE CA A 1002' AC3 Software A CA 1003 ? 2 'BINDING SITE FOR RESIDUE CA A 1003' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASP A 13 ? ASP A 7 . ? 1_555 ? 2 AC1 3 PHE A 14 ? PHE A 8 . ? 1_555 ? 3 AC1 3 ASP A 111 ? ASP A 105 . ? 1_555 ? 4 AC2 4 ALA A 187 ? ALA A 181 . ? 1_555 ? 5 AC2 4 ILE A 192 ? ILE A 186 . ? 1_555 ? 6 AC2 4 HOH G . ? HOH A 2002 . ? 1_555 ? 7 AC2 4 HOH G . ? HOH A 2026 . ? 1_555 ? 8 AC3 2 ASP A 300 ? ASP A 294 . ? 1_555 ? 9 AC3 2 DA C 10 ? DA C 356 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP2 B DA 375 ? ? O B HOH 2009 ? ? 2.09 2 1 O A PRO 27 ? ? O A HOH 2041 ? ? 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DA _pdbx_validate_rmsd_angle.auth_seq_id_1 376 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C4'" _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DA _pdbx_validate_rmsd_angle.auth_seq_id_2 376 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DA _pdbx_validate_rmsd_angle.auth_seq_id_3 376 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 101.55 _pdbx_validate_rmsd_angle.angle_target_value 104.50 _pdbx_validate_rmsd_angle.angle_deviation -2.95 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.40 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 10 ? ? 37.43 34.91 2 1 PHE A 11 ? ? -16.42 -65.22 3 1 ASN A 20 ? ? -158.98 66.60 4 1 PRO A 21 ? ? -29.69 -29.77 5 1 THR A 45 ? ? -171.15 148.26 6 1 LEU A 68 ? ? -110.77 69.46 7 1 GLU A 94 ? ? -72.70 48.58 8 1 TYR A 95 ? ? -160.28 -0.01 9 1 SER A 96 ? ? 164.19 156.78 10 1 SER A 112 ? ? -49.57 -18.13 11 1 ASP A 113 ? ? -83.72 -85.55 12 1 LYS A 114 ? ? -22.31 -87.06 13 1 GLU A 134 ? ? -63.70 -76.87 14 1 SER A 145 ? ? -175.69 -175.81 15 1 ALA A 158 ? ? -66.06 13.20 16 1 ASP A 168 ? ? -18.96 -62.57 17 1 PRO A 184 ? ? -36.08 128.48 18 1 ASN A 188 ? ? -24.27 -63.73 19 1 LEU A 197 ? ? -55.23 -2.21 20 1 ASP A 204 ? ? -31.75 -26.05 21 1 PHE A 210 ? ? -23.29 -74.20 22 1 ASP A 211 ? ? -41.87 -16.37 23 1 MET A 216 ? ? -96.19 -69.35 24 1 ILE A 226 ? ? -51.32 -71.59 25 1 ASN A 234 ? ? -174.68 63.22 26 1 PRO A 236 ? ? -69.99 -178.79 27 1 ARG A 242 ? ? -41.23 97.99 28 1 ARG A 247 ? ? -178.87 109.24 29 1 LYS A 262 ? ? -28.02 -65.29 30 1 LEU A 276 ? ? -23.66 -62.58 31 1 ASP A 277 ? ? 44.08 113.08 32 1 LYS A 278 ? ? 67.34 -23.92 33 1 GLU A 324 ? ? -73.39 -70.49 34 1 GLU A 325 ? ? -67.47 26.90 35 1 SER A 338 ? ? -139.62 -154.30 36 1 LYS A 339 ? ? 31.49 59.12 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 273 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.070 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id PVX _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id PVX _pdbx_struct_mod_residue.auth_seq_id 374 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS -5 ? A HIS 1 2 1 Y 1 A HIS -4 ? A HIS 2 3 1 Y 1 A HIS -3 ? A HIS 3 4 1 Y 1 A HIS -2 ? A HIS 4 5 1 Y 1 A HIS -1 ? A HIS 5 6 1 Y 1 A HIS 0 ? A HIS 6 7 1 Y 1 B DA 371 ? B DA 1 8 1 Y 1 B DT 372 ? B DT 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 MET N N N N 374 MET CA C N S 375 MET C C N N 376 MET O O N N 377 MET CB C N N 378 MET CG C N N 379 MET SD S N N 380 MET CE C N N 381 MET OXT O N N 382 MET H H N N 383 MET H2 H N N 384 MET HA H N N 385 MET HB2 H N N 386 MET HB3 H N N 387 MET HG2 H N N 388 MET HG3 H N N 389 MET HE1 H N N 390 MET HE2 H N N 391 MET HE3 H N N 392 MET HXT H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 PVX O O N N 434 PVX P P N N 435 PVX C1 C N N 436 PVX N1 N N N 437 PVX O1 O N N 438 PVX C2 C N N 439 PVX N2 N N N 440 PVX C3 C N N 441 PVX N3 N N N 442 PVX C4 C N N 443 PVX O4 O N N 444 PVX C5 C N N 445 PVX C6 C N N 446 PVX N6 N N N 447 PVX N7 N N N 448 PVX O7 O N N 449 PVX C8 C N N 450 PVX O8 O N N 451 PVX C9 C N R 452 PVX O9 O N N 453 PVX CM C N N 454 PVX O10 O N N 455 PVX C11 C N N 456 PVX O11 O N N 457 PVX C1D C N R 458 PVX O1P O N N 459 PVX C2A C N N 460 PVX C2D C N N 461 PVX O3P O N N 462 PVX "C3'" C N S 463 PVX "O3'" O N N 464 PVX C3A C N N 465 PVX O2P O N N 466 PVX C4A C Y N 467 PVX C4B C Y N 468 PVX C4D C N R 469 PVX O4D O N N 470 PVX C5B C Y N 471 PVX C5D C N N 472 PVX O5D O N N 473 PVX C5M C Y N 474 PVX C6A C N S 475 PVX O6A O N N 476 PVX C8A C N R 477 PVX C9A C N R 478 PVX C9B C Y N 479 PVX CA1 C Y N 480 PVX CB1 C N N 481 PVX HN2 H N N 482 PVX HN2A H N N 483 PVX H3 H N N 484 PVX HN3 H N N 485 PVX H8 H N N 486 PVX H9 H N N 487 PVX HO9 H N N 488 PVX HM H N N 489 PVX HMA H N N 490 PVX HMB H N N 491 PVX H1D H N N 492 PVX HO1P H N N 493 PVX H2A H N N 494 PVX H2D H N N 495 PVX H2DA H N N 496 PVX "H3'" H N N 497 PVX "HO3'" H N N 498 PVX H4D H N N 499 PVX H5B H N N 500 PVX H5D H N N 501 PVX H5DA H N N 502 PVX H6A H N N 503 PVX H8A H N N 504 PVX H9A H N N 505 PVX H25 H N N 506 PVX HO2P H N N 507 SER N N N N 508 SER CA C N S 509 SER C C N N 510 SER O O N N 511 SER CB C N N 512 SER OG O N N 513 SER OXT O N N 514 SER H H N N 515 SER H2 H N N 516 SER HA H N N 517 SER HB2 H N N 518 SER HB3 H N N 519 SER HG H N N 520 SER HXT H N N 521 THR N N N N 522 THR CA C N S 523 THR C C N N 524 THR O O N N 525 THR CB C N R 526 THR OG1 O N N 527 THR CG2 C N N 528 THR OXT O N N 529 THR H H N N 530 THR H2 H N N 531 THR HA H N N 532 THR HB H N N 533 THR HG1 H N N 534 THR HG21 H N N 535 THR HG22 H N N 536 THR HG23 H N N 537 THR HXT H N N 538 TYR N N N N 539 TYR CA C N S 540 TYR C C N N 541 TYR O O N N 542 TYR CB C N N 543 TYR CG C Y N 544 TYR CD1 C Y N 545 TYR CD2 C Y N 546 TYR CE1 C Y N 547 TYR CE2 C Y N 548 TYR CZ C Y N 549 TYR OH O N N 550 TYR OXT O N N 551 TYR H H N N 552 TYR H2 H N N 553 TYR HA H N N 554 TYR HB2 H N N 555 TYR HB3 H N N 556 TYR HD1 H N N 557 TYR HD2 H N N 558 TYR HE1 H N N 559 TYR HE2 H N N 560 TYR HH H N N 561 TYR HXT H N N 562 VAL N N N N 563 VAL CA C N S 564 VAL C C N N 565 VAL O O N N 566 VAL CB C N N 567 VAL CG1 C N N 568 VAL CG2 C N N 569 VAL OXT O N N 570 VAL H H N N 571 VAL H2 H N N 572 VAL HA H N N 573 VAL HB H N N 574 VAL HG11 H N N 575 VAL HG12 H N N 576 VAL HG13 H N N 577 VAL HG21 H N N 578 VAL HG22 H N N 579 VAL HG23 H N N 580 VAL HXT H N N 581 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 PVX O C4B sing N N 426 PVX O CM sing N N 427 PVX P O1P sing N N 428 PVX P O3P doub N N 429 PVX C1 C2A sing N N 430 PVX C1 CB1 sing N N 431 PVX N1 C6 sing N N 432 PVX O1 C1 doub N N 433 PVX C2 N1 doub N N 434 PVX N2 C2 sing N N 435 PVX N2 HN2 sing N N 436 PVX N2 HN2A sing N N 437 PVX C3 C3A sing N N 438 PVX C3 H3 sing N N 439 PVX N3 C2 sing N N 440 PVX N3 C4 sing N N 441 PVX N3 HN3 sing N N 442 PVX C4 C5 sing N N 443 PVX O4 C4 doub N N 444 PVX C5 N7 sing N N 445 PVX C5 C6 doub N N 446 PVX C6 N6 sing N N 447 PVX N6 C1D sing N N 448 PVX N7 C8 sing N N 449 PVX C8 O8 doub N N 450 PVX C8 H8 sing N N 451 PVX C9 C8A sing N N 452 PVX C9 H9 sing N N 453 PVX O9 C9 sing N N 454 PVX O9 HO9 sing N N 455 PVX CM HM sing N N 456 PVX CM HMA sing N N 457 PVX CM HMB sing N N 458 PVX O10 CA1 sing N N 459 PVX C11 O10 sing N N 460 PVX O11 C11 doub N N 461 PVX C1D C2D sing N N 462 PVX C1D H1D sing N N 463 PVX O1P HO1P sing N N 464 PVX C2A C3 doub N N 465 PVX C2A H2A sing N N 466 PVX C2D "C3'" sing N N 467 PVX C2D H2D sing N N 468 PVX C2D H2DA sing N N 469 PVX "C3'" "O3'" sing N N 470 PVX "C3'" "H3'" sing N N 471 PVX "O3'" "HO3'" sing N N 472 PVX C3A C4A sing N N 473 PVX O2P P sing N N 474 PVX C4A CA1 doub Y N 475 PVX C4A C4B sing Y N 476 PVX C4B C5B doub Y N 477 PVX C4D "C3'" sing N N 478 PVX C4D H4D sing N N 479 PVX O4D C1D sing N N 480 PVX O4D C4D sing N N 481 PVX C5B C5M sing Y N 482 PVX C5B H5B sing N N 483 PVX C5D C4D sing N N 484 PVX C5D H5D sing N N 485 PVX C5D H5DA sing N N 486 PVX O5D P sing N N 487 PVX O5D C5D sing N N 488 PVX C5M O6A sing N N 489 PVX C6A O7 sing N N 490 PVX C6A O6A sing N N 491 PVX C6A H6A sing N N 492 PVX C8A N7 sing N N 493 PVX C8A O7 sing N N 494 PVX C8A H8A sing N N 495 PVX C9A C9 sing N N 496 PVX C9A C6A sing N N 497 PVX C9A H9A sing N N 498 PVX C9B C5M doub Y N 499 PVX C9B C9A sing N N 500 PVX CA1 C9B sing Y N 501 PVX CB1 C11 sing N N 502 PVX CB1 C3A doub N N 503 PVX N6 H25 sing N N 504 PVX O2P HO2P sing N N 505 SER N CA sing N N 506 SER N H sing N N 507 SER N H2 sing N N 508 SER CA C sing N N 509 SER CA CB sing N N 510 SER CA HA sing N N 511 SER C O doub N N 512 SER C OXT sing N N 513 SER CB OG sing N N 514 SER CB HB2 sing N N 515 SER CB HB3 sing N N 516 SER OG HG sing N N 517 SER OXT HXT sing N N 518 THR N CA sing N N 519 THR N H sing N N 520 THR N H2 sing N N 521 THR CA C sing N N 522 THR CA CB sing N N 523 THR CA HA sing N N 524 THR C O doub N N 525 THR C OXT sing N N 526 THR CB OG1 sing N N 527 THR CB CG2 sing N N 528 THR CB HB sing N N 529 THR OG1 HG1 sing N N 530 THR CG2 HG21 sing N N 531 THR CG2 HG22 sing N N 532 THR CG2 HG23 sing N N 533 THR OXT HXT sing N N 534 TYR N CA sing N N 535 TYR N H sing N N 536 TYR N H2 sing N N 537 TYR CA C sing N N 538 TYR CA CB sing N N 539 TYR CA HA sing N N 540 TYR C O doub N N 541 TYR C OXT sing N N 542 TYR CB CG sing N N 543 TYR CB HB2 sing N N 544 TYR CB HB3 sing N N 545 TYR CG CD1 doub Y N 546 TYR CG CD2 sing Y N 547 TYR CD1 CE1 sing Y N 548 TYR CD1 HD1 sing N N 549 TYR CD2 CE2 doub Y N 550 TYR CD2 HD2 sing N N 551 TYR CE1 CZ doub Y N 552 TYR CE1 HE1 sing N N 553 TYR CE2 CZ sing Y N 554 TYR CE2 HE2 sing N N 555 TYR CZ OH sing N N 556 TYR OH HH sing N N 557 TYR OXT HXT sing N N 558 VAL N CA sing N N 559 VAL N H sing N N 560 VAL N H2 sing N N 561 VAL CA C sing N N 562 VAL CA CB sing N N 563 VAL CA HA sing N N 564 VAL C O doub N N 565 VAL C OXT sing N N 566 VAL CB CG1 sing N N 567 VAL CB CG2 sing N N 568 VAL CB HB sing N N 569 VAL CG1 HG11 sing N N 570 VAL CG1 HG12 sing N N 571 VAL CG1 HG13 sing N N 572 VAL CG2 HG21 sing N N 573 VAL CG2 HG22 sing N N 574 VAL CG2 HG23 sing N N 575 VAL OXT HXT sing N N 576 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3PVX 'double helix' 3PVX 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 5 1_555 C DT 12 1_555 -0.068 0.111 -0.121 11.313 -1.564 2.519 1 B_DA375:DT358_C B 375 ? C 358 ? 20 1 1 B DA 6 1_555 C DT 11 1_555 -0.134 0.537 -0.057 16.525 -0.151 9.611 2 B_DA376:DT357_C B 376 ? C 357 ? ? ? 1 B DT 7 1_555 C DA 10 1_555 -0.319 0.047 -0.643 16.960 -9.015 7.968 3 B_DT377:DA356_C B 377 ? C 356 ? 20 1 1 B DC 8 1_555 C DG 9 1_555 -0.694 0.327 -0.502 12.916 -7.999 1.728 4 B_DC378:DG355_C B 378 ? C 355 ? 19 1 1 B DC 9 1_555 C DG 8 1_555 -0.806 -0.249 -0.080 -5.871 3.852 -1.730 5 B_DC379:DG354_C B 379 ? C 354 ? 19 1 1 B DT 10 1_555 C DA 7 1_555 -0.642 -0.238 0.126 -1.672 -5.437 -6.117 6 B_DT380:DA353_C B 380 ? C 353 ? 20 1 1 B DT 11 1_555 C DA 6 1_555 -0.553 0.335 0.157 3.752 -3.222 -3.303 7 B_DT381:DA352_C B 381 ? C 352 ? 20 1 1 B DC 12 1_555 C DG 5 1_555 -0.535 0.108 0.306 -2.560 -10.828 8.445 8 B_DC382:DG351_C B 382 ? C 351 ? 19 1 1 B DC 13 1_555 C DG 4 1_555 -0.045 0.439 0.265 -9.263 -7.980 0.482 9 B_DC383:DG350_C B 383 ? C 350 ? 19 1 1 B DC 14 1_555 C DG 3 1_555 -0.375 -0.229 0.082 -4.017 0.815 -10.666 10 B_DC384:DG349_C B 384 ? C 349 ? 19 1 1 B DC 15 1_555 C DG 2 1_555 0.015 -0.177 -0.517 -1.198 -6.768 -0.048 11 B_DC385:DG348_C B 385 ? C 348 ? 19 1 1 B DC 16 1_555 C DG 1 1_555 1.084 -0.656 0.521 -5.400 -1.147 -1.416 12 B_DC386:DG347_C B 386 ? C 347 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 5 1_555 C DT 12 1_555 B DA 6 1_555 C DT 11 1_555 0.146 -0.333 3.066 -1.694 7.732 35.597 -1.527 -0.451 2.922 12.458 2.729 36.439 1 BB_DA375DA376:DT357DT358_CC B 375 ? C 358 ? B 376 ? C 357 ? 1 B DA 6 1_555 C DT 11 1_555 B DT 7 1_555 C DA 10 1_555 0.019 -0.650 3.372 0.759 8.856 25.388 -3.675 0.155 2.978 19.406 -1.664 26.875 2 BB_DA376DT377:DA356DT357_CC B 376 ? C 357 ? B 377 ? C 356 ? 1 B DT 7 1_555 C DA 10 1_555 B DC 8 1_555 C DG 9 1_555 0.160 -0.017 3.366 -2.195 -5.364 35.378 0.764 -0.585 3.317 -8.753 3.582 35.835 3 BB_DT377DC378:DG355DA356_CC B 377 ? C 356 ? B 378 ? C 355 ? 1 B DC 8 1_555 C DG 9 1_555 B DC 9 1_555 C DG 8 1_555 -0.117 -1.237 3.829 -3.107 8.201 31.987 -3.725 -0.385 3.412 14.543 5.510 33.137 4 BB_DC378DC379:DG354DG355_CC B 378 ? C 355 ? B 379 ? C 354 ? 1 B DC 9 1_555 C DG 8 1_555 B DT 10 1_555 C DA 7 1_555 -0.148 -0.078 3.310 0.094 -1.925 35.208 0.160 0.259 3.309 -3.179 -0.155 35.259 5 BB_DC379DT380:DA353DG354_CC B 379 ? C 354 ? B 380 ? C 353 ? 1 B DT 10 1_555 C DA 7 1_555 B DT 11 1_555 C DA 6 1_555 0.421 -0.601 3.082 0.704 3.184 31.948 -1.620 -0.643 3.018 5.766 -1.276 32.110 6 BB_DT380DT381:DA352DA353_CC B 380 ? C 353 ? B 381 ? C 352 ? 1 B DT 11 1_555 C DA 6 1_555 B DC 12 1_555 C DG 5 1_555 1.100 -0.617 3.356 3.357 4.504 35.341 -1.674 -1.293 3.341 7.361 -5.487 35.771 7 BB_DT381DC382:DG351DA352_CC B 381 ? C 352 ? B 382 ? C 351 ? 1 B DC 12 1_555 C DG 5 1_555 B DC 13 1_555 C DG 4 1_555 -0.659 0.016 3.457 -1.622 12.153 29.724 -2.297 0.881 3.246 22.522 3.005 32.101 8 BB_DC382DC383:DG350DG351_CC B 382 ? C 351 ? B 383 ? C 350 ? 1 B DC 13 1_555 C DG 4 1_555 B DC 14 1_555 C DG 3 1_555 -0.890 -0.828 3.285 -2.832 4.503 27.942 -2.717 1.164 3.188 9.221 5.799 28.434 9 BB_DC383DC384:DG349DG350_CC B 383 ? C 350 ? B 384 ? C 349 ? 1 B DC 14 1_555 C DG 3 1_555 B DC 15 1_555 C DG 2 1_555 1.822 -0.067 3.294 9.768 5.275 36.298 -0.832 -1.455 3.604 8.234 -15.247 37.903 10 BB_DC384DC385:DG348DG349_CC B 384 ? C 349 ? B 385 ? C 348 ? 1 B DC 15 1_555 C DG 2 1_555 B DC 16 1_555 C DG 1 1_555 -0.680 0.227 3.655 -10.090 2.836 39.280 -0.035 -0.309 3.718 4.130 14.694 40.600 11 BB_DC385DC386:DG347DG348_CC B 385 ? C 348 ? B 386 ? C 347 ? # _atom_sites.entry_id 3PVX _atom_sites.fract_transf_matrix[1][1] 0.010554 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009624 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018907 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_