data_3PW5 # _entry.id 3PW5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3PW5 pdb_00003pw5 10.2210/pdb3pw5/pdb NDB NA0914 ? ? RCSB RCSB062884 ? ? WWPDB D_1000062884 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-10 2 'Structure model' 1 1 2011-09-21 3 'Structure model' 2 0 2019-01-30 4 'Structure model' 2 1 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Database references' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Non-polymer description' 9 3 'Structure model' 'Polymer sequence' 10 3 'Structure model' 'Source and taxonomy' 11 3 'Structure model' 'Structure summary' 12 4 'Structure model' 'Data collection' 13 4 'Structure model' 'Database references' 14 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' database_PDB_caveat 4 3 'Structure model' entity 5 3 'Structure model' entity_poly 6 3 'Structure model' entity_poly_seq 7 3 'Structure model' entity_src_gen 8 3 'Structure model' ndb_struct_conf_na 9 3 'Structure model' ndb_struct_na_base_pair 10 3 'Structure model' ndb_struct_na_base_pair_step 11 3 'Structure model' pdbx_distant_solvent_atoms 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_entity_src_syn 14 3 'Structure model' pdbx_nonpoly_scheme 15 3 'Structure model' pdbx_poly_seq_scheme 16 3 'Structure model' pdbx_struct_assembly_gen 17 3 'Structure model' pdbx_struct_conn_angle 18 3 'Structure model' pdbx_struct_mod_residue 19 3 'Structure model' pdbx_validate_chiral 20 3 'Structure model' pdbx_validate_rmsd_angle 21 3 'Structure model' pdbx_validate_rmsd_bond 22 3 'Structure model' struct_asym 23 3 'Structure model' struct_conn 24 3 'Structure model' struct_conn_type 25 3 'Structure model' struct_ref 26 3 'Structure model' struct_ref_seq_dif 27 3 'Structure model' struct_site 28 3 'Structure model' struct_site_gen 29 4 'Structure model' chem_comp_atom 30 4 'Structure model' chem_comp_bond 31 4 'Structure model' database_2 32 4 'Structure model' pdbx_struct_conn_angle 33 4 'Structure model' struct_conn 34 4 'Structure model' struct_conn_type 35 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.group_PDB' 10 3 'Structure model' '_atom_site.label_asym_id' 11 3 'Structure model' '_atom_site.label_atom_id' 12 3 'Structure model' '_atom_site.label_comp_id' 13 3 'Structure model' '_atom_site.label_entity_id' 14 3 'Structure model' '_atom_site.label_seq_id' 15 3 'Structure model' '_atom_site.type_symbol' 16 3 'Structure model' '_chem_comp.formula' 17 3 'Structure model' '_chem_comp.formula_weight' 18 3 'Structure model' '_chem_comp.id' 19 3 'Structure model' '_chem_comp.mon_nstd_flag' 20 3 'Structure model' '_chem_comp.name' 21 3 'Structure model' '_chem_comp.type' 22 3 'Structure model' '_entity_poly.nstd_monomer' 23 3 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 24 3 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 25 3 'Structure model' '_entity_poly_seq.mon_id' 26 3 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 27 3 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 28 3 'Structure model' '_entity_src_gen.pdbx_seq_type' 29 3 'Structure model' '_ndb_struct_na_base_pair.buckle' 30 3 'Structure model' '_ndb_struct_na_base_pair.hbond_type_12' 31 3 'Structure model' '_ndb_struct_na_base_pair.hbond_type_28' 32 3 'Structure model' '_ndb_struct_na_base_pair.i_label_comp_id' 33 3 'Structure model' '_ndb_struct_na_base_pair.opening' 34 3 'Structure model' '_ndb_struct_na_base_pair.pair_name' 35 3 'Structure model' '_ndb_struct_na_base_pair.propeller' 36 3 'Structure model' '_ndb_struct_na_base_pair.shear' 37 3 'Structure model' '_ndb_struct_na_base_pair.stagger' 38 3 'Structure model' '_ndb_struct_na_base_pair.stretch' 39 3 'Structure model' '_ndb_struct_na_base_pair_step.helical_rise' 40 3 'Structure model' '_ndb_struct_na_base_pair_step.helical_twist' 41 3 'Structure model' '_ndb_struct_na_base_pair_step.i_label_comp_id_1' 42 3 'Structure model' '_ndb_struct_na_base_pair_step.inclination' 43 3 'Structure model' '_ndb_struct_na_base_pair_step.rise' 44 3 'Structure model' '_ndb_struct_na_base_pair_step.roll' 45 3 'Structure model' '_ndb_struct_na_base_pair_step.shift' 46 3 'Structure model' '_ndb_struct_na_base_pair_step.slide' 47 3 'Structure model' '_ndb_struct_na_base_pair_step.step_name' 48 3 'Structure model' '_ndb_struct_na_base_pair_step.tilt' 49 3 'Structure model' '_ndb_struct_na_base_pair_step.tip' 50 3 'Structure model' '_ndb_struct_na_base_pair_step.twist' 51 3 'Structure model' '_ndb_struct_na_base_pair_step.x_displacement' 52 3 'Structure model' '_ndb_struct_na_base_pair_step.y_displacement' 53 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 54 3 'Structure model' '_pdbx_entity_src_syn.pdbx_beg_seq_num' 55 3 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 56 3 'Structure model' '_pdbx_poly_seq_scheme.mon_id' 57 3 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 58 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 59 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 60 3 'Structure model' '_pdbx_validate_chiral.auth_comp_id' 61 3 'Structure model' '_struct_conn_type.id' 62 3 'Structure model' '_struct_ref.db_code' 63 3 'Structure model' '_struct_ref.pdbx_align_begin' 64 3 'Structure model' '_struct_ref_seq_dif.details' 65 3 'Structure model' '_struct_site.pdbx_num_residues' 66 4 'Structure model' '_database_2.pdbx_DOI' 67 4 'Structure model' '_database_2.pdbx_database_accession' 68 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 69 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 70 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 71 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 72 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 73 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 74 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 75 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 76 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 77 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 78 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 79 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 80 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 81 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 82 4 'Structure model' '_pdbx_struct_conn_angle.value' 83 4 'Structure model' '_struct_conn.conn_type_id' 84 4 'Structure model' '_struct_conn.id' 85 4 'Structure model' '_struct_conn.pdbx_dist_value' 86 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 87 4 'Structure model' '_struct_conn.pdbx_value_order' 88 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 89 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 90 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 91 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 92 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 93 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 94 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 95 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 96 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 97 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 98 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 99 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 100 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 101 4 'Structure model' '_struct_conn_type.id' 102 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 103 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 104 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 ;DG B 374 HAS WRONG CHIRALITY AT ATOM C4' ; 2 ;CHIRALITY ERROR IN RESIDUE X AT ATOM C4' ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3PW5 _pdbx_database_status.recvd_initial_deposition_date 2010-12-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3PVX . unspecified PDB 3PW0 . unspecified PDB 3PW2 . unspecified PDB 3PW4 . unspecified PDB 3PW7 . unspecified # _audit_author.name 'Banerjee, S.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 133 _citation.page_first 12556 _citation.page_last 12568 _citation.year 2011 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21790157 _citation.pdbx_database_id_DOI 10.1021/ja2015668 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banerjee, S.' 1 ? primary 'Brown, K.L.' 2 ? primary 'Egli, M.' 3 ? primary 'Stone, M.P.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase IV' 39848.398 1 2.7.7.7 ? 'UNP residues 1-341' ? 2 polymer syn ;DNA (5'-D(*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') ; 4455.898 1 ? ? ? 'Modified DNA Template' 3 polymer syn ;DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3') ; 4096.670 1 ? ? ? 'DNA Primer' 4 non-polymer syn "THYMIDINE-5'-TRIPHOSPHATE" 482.168 1 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 6 non-polymer syn '8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1' 330.289 1 ? ? ? ? 7 water nat water 18.015 57 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol IV' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYL PMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIA ADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYN EPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSE SVKLLQKILEEDERKIRRIGVRFSKFI ; ;HHHHHHMIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYL PMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIA ADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYN EPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSE SVKLLQKILEEDERKIRRIGVRFSKFI ; A ? 2 polydeoxyribonucleotide no no '(DT)(DT)(DG)(DA)(DA)(DT)(DC)(DC)(DT)(DT)(DC)(DC)(DC)(DC)(DC)' TTGAATCCTTCCCCC B ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DG)(DG)(DG)(DA)(DA)(DG)(DG)(DA)(DT)(DT)(DC)' GGGGGAAGGATTC C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 "THYMIDINE-5'-TRIPHOSPHATE" TTP 5 'CALCIUM ION' CA 6 '8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1' AFN 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 MET n 1 8 ILE n 1 9 VAL n 1 10 LEU n 1 11 PHE n 1 12 VAL n 1 13 ASP n 1 14 PHE n 1 15 ASP n 1 16 TYR n 1 17 PHE n 1 18 TYR n 1 19 ALA n 1 20 GLN n 1 21 VAL n 1 22 GLU n 1 23 GLU n 1 24 VAL n 1 25 LEU n 1 26 ASN n 1 27 PRO n 1 28 SER n 1 29 LEU n 1 30 LYS n 1 31 GLY n 1 32 LYS n 1 33 PRO n 1 34 VAL n 1 35 VAL n 1 36 VAL n 1 37 CYS n 1 38 VAL n 1 39 PHE n 1 40 SER n 1 41 GLY n 1 42 ARG n 1 43 PHE n 1 44 GLU n 1 45 ASP n 1 46 SER n 1 47 GLY n 1 48 ALA n 1 49 VAL n 1 50 ALA n 1 51 THR n 1 52 ALA n 1 53 ASN n 1 54 TYR n 1 55 GLU n 1 56 ALA n 1 57 ARG n 1 58 LYS n 1 59 PHE n 1 60 GLY n 1 61 VAL n 1 62 LYS n 1 63 ALA n 1 64 GLY n 1 65 ILE n 1 66 PRO n 1 67 ILE n 1 68 VAL n 1 69 GLU n 1 70 ALA n 1 71 LYS n 1 72 LYS n 1 73 ILE n 1 74 LEU n 1 75 PRO n 1 76 ASN n 1 77 ALA n 1 78 VAL n 1 79 TYR n 1 80 LEU n 1 81 PRO n 1 82 MET n 1 83 ARG n 1 84 LYS n 1 85 GLU n 1 86 VAL n 1 87 TYR n 1 88 GLN n 1 89 GLN n 1 90 VAL n 1 91 SER n 1 92 SER n 1 93 ARG n 1 94 ILE n 1 95 MET n 1 96 ASN n 1 97 LEU n 1 98 LEU n 1 99 ARG n 1 100 GLU n 1 101 TYR n 1 102 SER n 1 103 GLU n 1 104 LYS n 1 105 ILE n 1 106 GLU n 1 107 ILE n 1 108 ALA n 1 109 SER n 1 110 ILE n 1 111 ASP n 1 112 GLU n 1 113 ALA n 1 114 TYR n 1 115 LEU n 1 116 ASP n 1 117 ILE n 1 118 SER n 1 119 ASP n 1 120 LYS n 1 121 VAL n 1 122 ARG n 1 123 ASP n 1 124 TYR n 1 125 ARG n 1 126 GLU n 1 127 ALA n 1 128 TYR n 1 129 ASN n 1 130 LEU n 1 131 GLY n 1 132 LEU n 1 133 GLU n 1 134 ILE n 1 135 LYS n 1 136 ASN n 1 137 LYS n 1 138 ILE n 1 139 LEU n 1 140 GLU n 1 141 LYS n 1 142 GLU n 1 143 LYS n 1 144 ILE n 1 145 THR n 1 146 VAL n 1 147 THR n 1 148 VAL n 1 149 GLY n 1 150 ILE n 1 151 SER n 1 152 LYS n 1 153 ASN n 1 154 LYS n 1 155 VAL n 1 156 PHE n 1 157 ALA n 1 158 LYS n 1 159 ILE n 1 160 ALA n 1 161 ALA n 1 162 ASP n 1 163 MET n 1 164 ALA n 1 165 LYS n 1 166 PRO n 1 167 ASN n 1 168 GLY n 1 169 ILE n 1 170 LYS n 1 171 VAL n 1 172 ILE n 1 173 ASP n 1 174 ASP n 1 175 GLU n 1 176 GLU n 1 177 VAL n 1 178 LYS n 1 179 ARG n 1 180 LEU n 1 181 ILE n 1 182 ARG n 1 183 GLU n 1 184 LEU n 1 185 ASP n 1 186 ILE n 1 187 ALA n 1 188 ASP n 1 189 VAL n 1 190 PRO n 1 191 GLY n 1 192 ILE n 1 193 GLY n 1 194 ASN n 1 195 ILE n 1 196 THR n 1 197 ALA n 1 198 GLU n 1 199 LYS n 1 200 LEU n 1 201 LYS n 1 202 LYS n 1 203 LEU n 1 204 GLY n 1 205 ILE n 1 206 ASN n 1 207 LYS n 1 208 LEU n 1 209 VAL n 1 210 ASP n 1 211 THR n 1 212 LEU n 1 213 SER n 1 214 ILE n 1 215 GLU n 1 216 PHE n 1 217 ASP n 1 218 LYS n 1 219 LEU n 1 220 LYS n 1 221 GLY n 1 222 MET n 1 223 ILE n 1 224 GLY n 1 225 GLU n 1 226 ALA n 1 227 LYS n 1 228 ALA n 1 229 LYS n 1 230 TYR n 1 231 LEU n 1 232 ILE n 1 233 SER n 1 234 LEU n 1 235 ALA n 1 236 ARG n 1 237 ASP n 1 238 GLU n 1 239 TYR n 1 240 ASN n 1 241 GLU n 1 242 PRO n 1 243 ILE n 1 244 ARG n 1 245 THR n 1 246 ARG n 1 247 VAL n 1 248 ARG n 1 249 LYS n 1 250 SER n 1 251 ILE n 1 252 GLY n 1 253 ARG n 1 254 ILE n 1 255 VAL n 1 256 THR n 1 257 MET n 1 258 LYS n 1 259 ARG n 1 260 ASN n 1 261 SER n 1 262 ARG n 1 263 ASN n 1 264 LEU n 1 265 GLU n 1 266 GLU n 1 267 ILE n 1 268 LYS n 1 269 PRO n 1 270 TYR n 1 271 LEU n 1 272 PHE n 1 273 ARG n 1 274 ALA n 1 275 ILE n 1 276 GLU n 1 277 GLU n 1 278 SER n 1 279 TYR n 1 280 TYR n 1 281 LYS n 1 282 LEU n 1 283 ASP n 1 284 LYS n 1 285 ARG n 1 286 ILE n 1 287 PRO n 1 288 LYS n 1 289 ALA n 1 290 ILE n 1 291 HIS n 1 292 VAL n 1 293 VAL n 1 294 ALA n 1 295 VAL n 1 296 THR n 1 297 GLU n 1 298 ASP n 1 299 LEU n 1 300 ASP n 1 301 ILE n 1 302 VAL n 1 303 SER n 1 304 ARG n 1 305 GLY n 1 306 ARG n 1 307 THR n 1 308 PHE n 1 309 PRO n 1 310 HIS n 1 311 GLY n 1 312 ILE n 1 313 SER n 1 314 LYS n 1 315 GLU n 1 316 THR n 1 317 ALA n 1 318 TYR n 1 319 SER n 1 320 GLU n 1 321 SER n 1 322 VAL n 1 323 LYS n 1 324 LEU n 1 325 LEU n 1 326 GLN n 1 327 LYS n 1 328 ILE n 1 329 LEU n 1 330 GLU n 1 331 GLU n 1 332 ASP n 1 333 GLU n 1 334 ARG n 1 335 LYS n 1 336 ILE n 1 337 ARG n 1 338 ARG n 1 339 ILE n 1 340 GLY n 1 341 VAL n 1 342 ARG n 1 343 PHE n 1 344 SER n 1 345 LYS n 1 346 PHE n 1 347 ILE n 2 1 DT n 2 2 DT n 2 3 DG n 2 4 DA n 2 5 DA n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DT n 2 10 DT n 2 11 DC n 2 12 DC n 2 13 DC n 2 14 DC n 2 15 DC n 3 1 DG n 3 2 DG n 3 3 DG n 3 4 DG n 3 5 DG n 3 6 DA n 3 7 DA n 3 8 DG n 3 9 DG n 3 10 DA n 3 11 DT n 3 12 DT n 3 13 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 347 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dbh, dpo4, SSO2448' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus solfataricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 15 'synthetic construct' ? 32630 ? 3 1 sample 1 13 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AFN non-polymer . '8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1' ? 'C17 H14 O7' 330.289 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TTP non-polymer . "THYMIDINE-5'-TRIPHOSPHATE" ? 'C10 H17 N2 O14 P3' 482.168 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -4 ? ? ? A . n A 1 2 HIS 2 -3 ? ? ? A . n A 1 3 HIS 3 -2 ? ? ? A . n A 1 4 HIS 4 -1 ? ? ? A . n A 1 5 HIS 5 0 ? ? ? A . n A 1 6 HIS 6 1 1 HIS HIS A . n A 1 7 MET 7 2 2 MET MET A . n A 1 8 ILE 8 3 3 ILE ILE A . n A 1 9 VAL 9 4 4 VAL VAL A . n A 1 10 LEU 10 5 5 LEU LEU A . n A 1 11 PHE 11 6 6 PHE PHE A . n A 1 12 VAL 12 7 7 VAL VAL A . n A 1 13 ASP 13 8 8 ASP ASP A . n A 1 14 PHE 14 9 9 PHE PHE A . n A 1 15 ASP 15 10 10 ASP ASP A . n A 1 16 TYR 16 11 11 TYR TYR A . n A 1 17 PHE 17 12 12 PHE PHE A . n A 1 18 TYR 18 13 13 TYR TYR A . n A 1 19 ALA 19 14 14 ALA ALA A . n A 1 20 GLN 20 15 15 GLN GLN A . n A 1 21 VAL 21 16 16 VAL VAL A . n A 1 22 GLU 22 17 17 GLU GLU A . n A 1 23 GLU 23 18 18 GLU GLU A . n A 1 24 VAL 24 19 19 VAL VAL A . n A 1 25 LEU 25 20 20 LEU LEU A . n A 1 26 ASN 26 21 21 ASN ASN A . n A 1 27 PRO 27 22 22 PRO PRO A . n A 1 28 SER 28 23 23 SER SER A . n A 1 29 LEU 29 24 24 LEU LEU A . n A 1 30 LYS 30 25 25 LYS LYS A . n A 1 31 GLY 31 26 26 GLY GLY A . n A 1 32 LYS 32 27 27 LYS LYS A . n A 1 33 PRO 33 28 28 PRO PRO A . n A 1 34 VAL 34 29 29 VAL VAL A . n A 1 35 VAL 35 30 30 VAL VAL A . n A 1 36 VAL 36 31 31 VAL VAL A . n A 1 37 CYS 37 32 32 CYS CYS A . n A 1 38 VAL 38 33 33 VAL VAL A . n A 1 39 PHE 39 34 34 PHE PHE A . n A 1 40 SER 40 35 35 SER SER A . n A 1 41 GLY 41 36 36 GLY GLY A . n A 1 42 ARG 42 37 37 ARG ARG A . n A 1 43 PHE 43 38 38 PHE PHE A . n A 1 44 GLU 44 39 39 GLU GLU A . n A 1 45 ASP 45 40 40 ASP ASP A . n A 1 46 SER 46 41 41 SER SER A . n A 1 47 GLY 47 42 42 GLY GLY A . n A 1 48 ALA 48 43 43 ALA ALA A . n A 1 49 VAL 49 44 44 VAL VAL A . n A 1 50 ALA 50 45 45 ALA ALA A . n A 1 51 THR 51 46 46 THR THR A . n A 1 52 ALA 52 47 47 ALA ALA A . n A 1 53 ASN 53 48 48 ASN ASN A . n A 1 54 TYR 54 49 49 TYR TYR A . n A 1 55 GLU 55 50 50 GLU GLU A . n A 1 56 ALA 56 51 51 ALA ALA A . n A 1 57 ARG 57 52 52 ARG ARG A . n A 1 58 LYS 58 53 53 LYS LYS A . n A 1 59 PHE 59 54 54 PHE PHE A . n A 1 60 GLY 60 55 55 GLY GLY A . n A 1 61 VAL 61 56 56 VAL VAL A . n A 1 62 LYS 62 57 57 LYS LYS A . n A 1 63 ALA 63 58 58 ALA ALA A . n A 1 64 GLY 64 59 59 GLY GLY A . n A 1 65 ILE 65 60 60 ILE ILE A . n A 1 66 PRO 66 61 61 PRO PRO A . n A 1 67 ILE 67 62 62 ILE ILE A . n A 1 68 VAL 68 63 63 VAL VAL A . n A 1 69 GLU 69 64 64 GLU GLU A . n A 1 70 ALA 70 65 65 ALA ALA A . n A 1 71 LYS 71 66 66 LYS LYS A . n A 1 72 LYS 72 67 67 LYS LYS A . n A 1 73 ILE 73 68 68 ILE ILE A . n A 1 74 LEU 74 69 69 LEU LEU A . n A 1 75 PRO 75 70 70 PRO PRO A . n A 1 76 ASN 76 71 71 ASN ASN A . n A 1 77 ALA 77 72 72 ALA ALA A . n A 1 78 VAL 78 73 73 VAL VAL A . n A 1 79 TYR 79 74 74 TYR TYR A . n A 1 80 LEU 80 75 75 LEU LEU A . n A 1 81 PRO 81 76 76 PRO PRO A . n A 1 82 MET 82 77 77 MET MET A . n A 1 83 ARG 83 78 78 ARG ARG A . n A 1 84 LYS 84 79 79 LYS LYS A . n A 1 85 GLU 85 80 80 GLU GLU A . n A 1 86 VAL 86 81 81 VAL VAL A . n A 1 87 TYR 87 82 82 TYR TYR A . n A 1 88 GLN 88 83 83 GLN GLN A . n A 1 89 GLN 89 84 84 GLN GLN A . n A 1 90 VAL 90 85 85 VAL VAL A . n A 1 91 SER 91 86 86 SER SER A . n A 1 92 SER 92 87 87 SER SER A . n A 1 93 ARG 93 88 88 ARG ARG A . n A 1 94 ILE 94 89 89 ILE ILE A . n A 1 95 MET 95 90 90 MET MET A . n A 1 96 ASN 96 91 91 ASN ASN A . n A 1 97 LEU 97 92 92 LEU LEU A . n A 1 98 LEU 98 93 93 LEU LEU A . n A 1 99 ARG 99 94 94 ARG ARG A . n A 1 100 GLU 100 95 95 GLU GLU A . n A 1 101 TYR 101 96 96 TYR TYR A . n A 1 102 SER 102 97 97 SER SER A . n A 1 103 GLU 103 98 98 GLU GLU A . n A 1 104 LYS 104 99 99 LYS LYS A . n A 1 105 ILE 105 100 100 ILE ILE A . n A 1 106 GLU 106 101 101 GLU GLU A . n A 1 107 ILE 107 102 102 ILE ILE A . n A 1 108 ALA 108 103 103 ALA ALA A . n A 1 109 SER 109 104 104 SER SER A . n A 1 110 ILE 110 105 105 ILE ILE A . n A 1 111 ASP 111 106 106 ASP ASP A . n A 1 112 GLU 112 107 107 GLU GLU A . n A 1 113 ALA 113 108 108 ALA ALA A . n A 1 114 TYR 114 109 109 TYR TYR A . n A 1 115 LEU 115 110 110 LEU LEU A . n A 1 116 ASP 116 111 111 ASP ASP A . n A 1 117 ILE 117 112 112 ILE ILE A . n A 1 118 SER 118 113 113 SER SER A . n A 1 119 ASP 119 114 114 ASP ASP A . n A 1 120 LYS 120 115 115 LYS LYS A . n A 1 121 VAL 121 116 116 VAL VAL A . n A 1 122 ARG 122 117 117 ARG ARG A . n A 1 123 ASP 123 118 118 ASP ASP A . n A 1 124 TYR 124 119 119 TYR TYR A . n A 1 125 ARG 125 120 120 ARG ARG A . n A 1 126 GLU 126 121 121 GLU GLU A . n A 1 127 ALA 127 122 122 ALA ALA A . n A 1 128 TYR 128 123 123 TYR TYR A . n A 1 129 ASN 129 124 124 ASN ASN A . n A 1 130 LEU 130 125 125 LEU LEU A . n A 1 131 GLY 131 126 126 GLY GLY A . n A 1 132 LEU 132 127 127 LEU LEU A . n A 1 133 GLU 133 128 128 GLU GLU A . n A 1 134 ILE 134 129 129 ILE ILE A . n A 1 135 LYS 135 130 130 LYS LYS A . n A 1 136 ASN 136 131 131 ASN ASN A . n A 1 137 LYS 137 132 132 LYS LYS A . n A 1 138 ILE 138 133 133 ILE ILE A . n A 1 139 LEU 139 134 134 LEU LEU A . n A 1 140 GLU 140 135 135 GLU GLU A . n A 1 141 LYS 141 136 136 LYS LYS A . n A 1 142 GLU 142 137 137 GLU GLU A . n A 1 143 LYS 143 138 138 LYS LYS A . n A 1 144 ILE 144 139 139 ILE ILE A . n A 1 145 THR 145 140 140 THR THR A . n A 1 146 VAL 146 141 141 VAL VAL A . n A 1 147 THR 147 142 142 THR THR A . n A 1 148 VAL 148 143 143 VAL VAL A . n A 1 149 GLY 149 144 144 GLY GLY A . n A 1 150 ILE 150 145 145 ILE ILE A . n A 1 151 SER 151 146 146 SER SER A . n A 1 152 LYS 152 147 147 LYS LYS A . n A 1 153 ASN 153 148 148 ASN ASN A . n A 1 154 LYS 154 149 149 LYS LYS A . n A 1 155 VAL 155 150 150 VAL VAL A . n A 1 156 PHE 156 151 151 PHE PHE A . n A 1 157 ALA 157 152 152 ALA ALA A . n A 1 158 LYS 158 153 153 LYS LYS A . n A 1 159 ILE 159 154 154 ILE ILE A . n A 1 160 ALA 160 155 155 ALA ALA A . n A 1 161 ALA 161 156 156 ALA ALA A . n A 1 162 ASP 162 157 157 ASP ASP A . n A 1 163 MET 163 158 158 MET MET A . n A 1 164 ALA 164 159 159 ALA ALA A . n A 1 165 LYS 165 160 160 LYS LYS A . n A 1 166 PRO 166 161 161 PRO PRO A . n A 1 167 ASN 167 162 162 ASN ASN A . n A 1 168 GLY 168 163 163 GLY GLY A . n A 1 169 ILE 169 164 164 ILE ILE A . n A 1 170 LYS 170 165 165 LYS LYS A . n A 1 171 VAL 171 166 166 VAL VAL A . n A 1 172 ILE 172 167 167 ILE ILE A . n A 1 173 ASP 173 168 168 ASP ASP A . n A 1 174 ASP 174 169 169 ASP ASP A . n A 1 175 GLU 175 170 170 GLU GLU A . n A 1 176 GLU 176 171 171 GLU GLU A . n A 1 177 VAL 177 172 172 VAL VAL A . n A 1 178 LYS 178 173 173 LYS LYS A . n A 1 179 ARG 179 174 174 ARG ARG A . n A 1 180 LEU 180 175 175 LEU LEU A . n A 1 181 ILE 181 176 176 ILE ILE A . n A 1 182 ARG 182 177 177 ARG ARG A . n A 1 183 GLU 183 178 178 GLU GLU A . n A 1 184 LEU 184 179 179 LEU LEU A . n A 1 185 ASP 185 180 180 ASP ASP A . n A 1 186 ILE 186 181 181 ILE ILE A . n A 1 187 ALA 187 182 182 ALA ALA A . n A 1 188 ASP 188 183 183 ASP ASP A . n A 1 189 VAL 189 184 184 VAL VAL A . n A 1 190 PRO 190 185 185 PRO PRO A . n A 1 191 GLY 191 186 186 GLY GLY A . n A 1 192 ILE 192 187 187 ILE ILE A . n A 1 193 GLY 193 188 188 GLY GLY A . n A 1 194 ASN 194 189 189 ASN ASN A . n A 1 195 ILE 195 190 190 ILE ILE A . n A 1 196 THR 196 191 191 THR THR A . n A 1 197 ALA 197 192 192 ALA ALA A . n A 1 198 GLU 198 193 193 GLU GLU A . n A 1 199 LYS 199 194 194 LYS LYS A . n A 1 200 LEU 200 195 195 LEU LEU A . n A 1 201 LYS 201 196 196 LYS LYS A . n A 1 202 LYS 202 197 197 LYS LYS A . n A 1 203 LEU 203 198 198 LEU LEU A . n A 1 204 GLY 204 199 199 GLY GLY A . n A 1 205 ILE 205 200 200 ILE ILE A . n A 1 206 ASN 206 201 201 ASN ASN A . n A 1 207 LYS 207 202 202 LYS LYS A . n A 1 208 LEU 208 203 203 LEU LEU A . n A 1 209 VAL 209 204 204 VAL VAL A . n A 1 210 ASP 210 205 205 ASP ASP A . n A 1 211 THR 211 206 206 THR THR A . n A 1 212 LEU 212 207 207 LEU LEU A . n A 1 213 SER 213 208 208 SER SER A . n A 1 214 ILE 214 209 209 ILE ILE A . n A 1 215 GLU 215 210 210 GLU GLU A . n A 1 216 PHE 216 211 211 PHE PHE A . n A 1 217 ASP 217 212 212 ASP ASP A . n A 1 218 LYS 218 213 213 LYS LYS A . n A 1 219 LEU 219 214 214 LEU LEU A . n A 1 220 LYS 220 215 215 LYS LYS A . n A 1 221 GLY 221 216 216 GLY GLY A . n A 1 222 MET 222 217 217 MET MET A . n A 1 223 ILE 223 218 218 ILE ILE A . n A 1 224 GLY 224 219 219 GLY GLY A . n A 1 225 GLU 225 220 220 GLU GLU A . n A 1 226 ALA 226 221 221 ALA ALA A . n A 1 227 LYS 227 222 222 LYS LYS A . n A 1 228 ALA 228 223 223 ALA ALA A . n A 1 229 LYS 229 224 224 LYS LYS A . n A 1 230 TYR 230 225 225 TYR TYR A . n A 1 231 LEU 231 226 226 LEU LEU A . n A 1 232 ILE 232 227 227 ILE ILE A . n A 1 233 SER 233 228 228 SER SER A . n A 1 234 LEU 234 229 229 LEU LEU A . n A 1 235 ALA 235 230 230 ALA ALA A . n A 1 236 ARG 236 231 231 ARG ARG A . n A 1 237 ASP 237 232 232 ASP ASP A . n A 1 238 GLU 238 233 233 GLU GLU A . n A 1 239 TYR 239 234 234 TYR TYR A . n A 1 240 ASN 240 235 235 ASN ASN A . n A 1 241 GLU 241 236 236 GLU GLU A . n A 1 242 PRO 242 237 237 PRO PRO A . n A 1 243 ILE 243 238 238 ILE ILE A . n A 1 244 ARG 244 239 239 ARG ARG A . n A 1 245 THR 245 240 240 THR THR A . n A 1 246 ARG 246 241 241 ARG ARG A . n A 1 247 VAL 247 242 242 VAL VAL A . n A 1 248 ARG 248 243 243 ARG ARG A . n A 1 249 LYS 249 244 244 LYS LYS A . n A 1 250 SER 250 245 245 SER SER A . n A 1 251 ILE 251 246 246 ILE ILE A . n A 1 252 GLY 252 247 247 GLY GLY A . n A 1 253 ARG 253 248 248 ARG ARG A . n A 1 254 ILE 254 249 249 ILE ILE A . n A 1 255 VAL 255 250 250 VAL VAL A . n A 1 256 THR 256 251 251 THR THR A . n A 1 257 MET 257 252 252 MET MET A . n A 1 258 LYS 258 253 253 LYS LYS A . n A 1 259 ARG 259 254 254 ARG ARG A . n A 1 260 ASN 260 255 255 ASN ASN A . n A 1 261 SER 261 256 256 SER SER A . n A 1 262 ARG 262 257 257 ARG ARG A . n A 1 263 ASN 263 258 258 ASN ASN A . n A 1 264 LEU 264 259 259 LEU LEU A . n A 1 265 GLU 265 260 260 GLU GLU A . n A 1 266 GLU 266 261 261 GLU GLU A . n A 1 267 ILE 267 262 262 ILE ILE A . n A 1 268 LYS 268 263 263 LYS LYS A . n A 1 269 PRO 269 264 264 PRO PRO A . n A 1 270 TYR 270 265 265 TYR TYR A . n A 1 271 LEU 271 266 266 LEU LEU A . n A 1 272 PHE 272 267 267 PHE PHE A . n A 1 273 ARG 273 268 268 ARG ARG A . n A 1 274 ALA 274 269 269 ALA ALA A . n A 1 275 ILE 275 270 270 ILE ILE A . n A 1 276 GLU 276 271 271 GLU GLU A . n A 1 277 GLU 277 272 272 GLU GLU A . n A 1 278 SER 278 273 273 SER SER A . n A 1 279 TYR 279 274 274 TYR TYR A . n A 1 280 TYR 280 275 275 TYR TYR A . n A 1 281 LYS 281 276 276 LYS LYS A . n A 1 282 LEU 282 277 277 LEU LEU A . n A 1 283 ASP 283 278 278 ASP ASP A . n A 1 284 LYS 284 279 279 LYS LYS A . n A 1 285 ARG 285 280 280 ARG ARG A . n A 1 286 ILE 286 281 281 ILE ILE A . n A 1 287 PRO 287 282 282 PRO PRO A . n A 1 288 LYS 288 283 283 LYS LYS A . n A 1 289 ALA 289 284 284 ALA ALA A . n A 1 290 ILE 290 285 285 ILE ILE A . n A 1 291 HIS 291 286 286 HIS HIS A . n A 1 292 VAL 292 287 287 VAL VAL A . n A 1 293 VAL 293 288 288 VAL VAL A . n A 1 294 ALA 294 289 289 ALA ALA A . n A 1 295 VAL 295 290 290 VAL VAL A . n A 1 296 THR 296 291 291 THR THR A . n A 1 297 GLU 297 292 292 GLU GLU A . n A 1 298 ASP 298 293 293 ASP ASP A . n A 1 299 LEU 299 294 294 LEU LEU A . n A 1 300 ASP 300 295 295 ASP ASP A . n A 1 301 ILE 301 296 296 ILE ILE A . n A 1 302 VAL 302 297 297 VAL VAL A . n A 1 303 SER 303 298 298 SER SER A . n A 1 304 ARG 304 299 299 ARG ARG A . n A 1 305 GLY 305 300 300 GLY GLY A . n A 1 306 ARG 306 301 301 ARG ARG A . n A 1 307 THR 307 302 302 THR THR A . n A 1 308 PHE 308 303 303 PHE PHE A . n A 1 309 PRO 309 304 304 PRO PRO A . n A 1 310 HIS 310 305 305 HIS HIS A . n A 1 311 GLY 311 306 306 GLY GLY A . n A 1 312 ILE 312 307 307 ILE ILE A . n A 1 313 SER 313 308 308 SER SER A . n A 1 314 LYS 314 309 309 LYS LYS A . n A 1 315 GLU 315 310 310 GLU GLU A . n A 1 316 THR 316 311 311 THR THR A . n A 1 317 ALA 317 312 312 ALA ALA A . n A 1 318 TYR 318 313 313 TYR TYR A . n A 1 319 SER 319 314 314 SER SER A . n A 1 320 GLU 320 315 315 GLU GLU A . n A 1 321 SER 321 316 316 SER SER A . n A 1 322 VAL 322 317 317 VAL VAL A . n A 1 323 LYS 323 318 318 LYS LYS A . n A 1 324 LEU 324 319 319 LEU LEU A . n A 1 325 LEU 325 320 320 LEU LEU A . n A 1 326 GLN 326 321 321 GLN GLN A . n A 1 327 LYS 327 322 322 LYS LYS A . n A 1 328 ILE 328 323 323 ILE ILE A . n A 1 329 LEU 329 324 324 LEU LEU A . n A 1 330 GLU 330 325 325 GLU GLU A . n A 1 331 GLU 331 326 326 GLU GLU A . n A 1 332 ASP 332 327 327 ASP ASP A . n A 1 333 GLU 333 328 328 GLU GLU A . n A 1 334 ARG 334 329 329 ARG ARG A . n A 1 335 LYS 335 330 330 LYS LYS A . n A 1 336 ILE 336 331 331 ILE ILE A . n A 1 337 ARG 337 332 332 ARG ARG A . n A 1 338 ARG 338 333 333 ARG ARG A . n A 1 339 ILE 339 334 334 ILE ILE A . n A 1 340 GLY 340 335 335 GLY GLY A . n A 1 341 VAL 341 336 336 VAL VAL A . n A 1 342 ARG 342 337 337 ARG ARG A . n A 1 343 PHE 343 338 338 PHE PHE A . n A 1 344 SER 344 339 339 SER SER A . n A 1 345 LYS 345 340 340 LYS LYS A . n A 1 346 PHE 346 341 341 PHE PHE A . n A 1 347 ILE 347 342 342 ILE ILE A . n B 2 1 DT 1 372 372 DT DT B . n B 2 2 DT 2 373 373 DT DT B . n B 2 3 DG 3 374 374 DG X B . n B 2 4 DA 4 375 375 DA DA B . n B 2 5 DA 5 376 376 DA DA B . n B 2 6 DT 6 377 377 DT DT B . n B 2 7 DC 7 378 378 DC DC B . n B 2 8 DC 8 379 379 DC DC B . n B 2 9 DT 9 380 380 DT DT B . n B 2 10 DT 10 381 381 DT DT B . n B 2 11 DC 11 382 382 DC DC B . n B 2 12 DC 12 383 383 DC DC B . n B 2 13 DC 13 384 384 DC DC B . n B 2 14 DC 14 385 385 DC DC B . n B 2 15 DC 15 386 386 DC DC B . n C 3 1 DG 1 347 347 DG DG C . n C 3 2 DG 2 348 348 DG DG C . n C 3 3 DG 3 349 349 DG DG C . n C 3 4 DG 4 350 350 DG DG C . n C 3 5 DG 5 351 351 DG DG C . n C 3 6 DA 6 352 352 DA DA C . n C 3 7 DA 7 353 353 DA DA C . n C 3 8 DG 8 354 354 DG DG C . n C 3 9 DG 9 355 355 DG DG C . n C 3 10 DA 10 356 356 DA DA C . n C 3 11 DT 11 357 357 DT DT C . n C 3 12 DT 12 358 358 DT DT C . n C 3 13 DC 13 359 359 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 TTP 1 400 400 TTP TTP A . E 5 CA 1 1001 1001 CA CA A . F 5 CA 1 1002 1002 CA CA A . G 5 CA 1 1003 1003 CA CA A . H 6 AFN 1 387 374 AFN X B . I 7 HOH 1 2001 2001 HOH HOH A . I 7 HOH 2 2002 2002 HOH HOH A . I 7 HOH 3 2008 2008 HOH HOH A . I 7 HOH 4 2009 2009 HOH HOH A . I 7 HOH 5 2010 2010 HOH HOH A . I 7 HOH 6 2011 2011 HOH HOH A . I 7 HOH 7 2013 2013 HOH HOH A . I 7 HOH 8 2014 2014 HOH HOH A . I 7 HOH 9 2015 2015 HOH HOH A . I 7 HOH 10 2016 2016 HOH HOH A . I 7 HOH 11 2017 2017 HOH HOH A . I 7 HOH 12 2018 2018 HOH HOH A . I 7 HOH 13 2019 2019 HOH HOH A . I 7 HOH 14 2020 2020 HOH HOH A . I 7 HOH 15 2021 2021 HOH HOH A . I 7 HOH 16 2022 2022 HOH HOH A . I 7 HOH 17 2023 2023 HOH HOH A . I 7 HOH 18 2024 2024 HOH HOH A . I 7 HOH 19 2025 2025 HOH HOH A . I 7 HOH 20 2026 2026 HOH HOH A . I 7 HOH 21 2027 2027 HOH HOH A . I 7 HOH 22 2028 2028 HOH HOH A . I 7 HOH 23 2029 2029 HOH HOH A . I 7 HOH 24 2030 2030 HOH HOH A . I 7 HOH 25 2031 2031 HOH HOH A . I 7 HOH 26 2032 2032 HOH HOH A . I 7 HOH 27 2033 2033 HOH HOH A . I 7 HOH 28 2034 2034 HOH HOH A . I 7 HOH 29 2035 2035 HOH HOH A . I 7 HOH 30 2036 2036 HOH HOH A . I 7 HOH 31 2037 2037 HOH HOH A . I 7 HOH 32 2038 2038 HOH HOH A . I 7 HOH 33 2039 2039 HOH HOH A . I 7 HOH 34 2040 2040 HOH HOH A . I 7 HOH 35 2041 2041 HOH HOH A . I 7 HOH 36 2042 2042 HOH HOH A . I 7 HOH 37 2046 2046 HOH HOH A . I 7 HOH 38 2047 2047 HOH HOH A . I 7 HOH 39 2048 2048 HOH HOH A . I 7 HOH 40 2049 2049 HOH HOH A . I 7 HOH 41 2050 2050 HOH HOH A . I 7 HOH 42 2051 2051 HOH HOH A . I 7 HOH 43 2052 2052 HOH HOH A . I 7 HOH 44 2053 2053 HOH HOH A . I 7 HOH 45 2055 2055 HOH HOH A . I 7 HOH 46 2056 2056 HOH HOH A . J 7 HOH 1 2003 2003 HOH HOH B . J 7 HOH 2 2005 2005 HOH HOH B . J 7 HOH 3 2012 2012 HOH HOH B . J 7 HOH 4 2043 2043 HOH HOH B . J 7 HOH 5 2044 2044 HOH HOH B . J 7 HOH 6 2054 2054 HOH HOH B . K 7 HOH 1 2004 2004 HOH HOH C . K 7 HOH 2 2006 2006 HOH HOH C . K 7 HOH 3 2007 2007 HOH HOH C . K 7 HOH 4 2045 2045 HOH HOH C . K 7 HOH 5 2057 2057 HOH HOH C . # _software.name CNS _software.classification refinement _software.version 1.1 _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 3PW5 _cell.length_a 94.667 _cell.length_b 104.415 _cell.length_c 52.510 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3PW5 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3PW5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_percent_sol 53.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2009-02-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.entry_id 3PW5 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 29.16 _reflns.d_resolution_high 3.0 _reflns.number_obs 10563 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 46.6 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3PW5 _refine.ls_number_reflns_obs 10563 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 66170.03 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.16 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 96.6 _refine.ls_R_factor_obs 0.212 _refine.ls_R_factor_R_work 0.212 _refine.ls_R_factor_R_free 0.283 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.2 _refine.ls_number_reflns_R_free 1076 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 57.0 _refine.aniso_B[1][1] 7.96 _refine.aniso_B[2][2] -1.15 _refine.aniso_B[3][3] -6.82 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.302554 _refine.solvent_model_param_bsol 15.364 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'RESOLUTION-DEPENDENT WEIGHTING SCHEME BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.ls_R_factor_all ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3PW5 _refine_analyze.Luzzati_coordinate_error_obs 0.37 _refine_analyze.Luzzati_sigma_a_obs 0.35 _refine_analyze.Luzzati_d_res_low_obs 50.00 _refine_analyze.Luzzati_coordinate_error_free 0.51 _refine_analyze.Luzzati_sigma_a_free 0.40 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2754 _refine_hist.pdbx_number_atoms_nucleic_acid 591 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 57 _refine_hist.number_atoms_total 3434 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 29.16 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.99 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.44 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.57 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.92 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.21 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work 1391 _refine_ls_shell.R_factor_R_work 0.349 _refine_ls_shell.percent_reflns_obs 87.7 _refine_ls_shell.R_factor_R_free 0.385 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.percent_reflns_R_free 10.4 _refine_ls_shell.number_reflns_R_free 161 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_cat.param dna-rna_cat.top 'X-RAY DIFFRACTION' 3 dttp.param dttp.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 water_rep.param water.top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3PW5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3PW5 _struct.title 'Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dTTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3PW5 _struct_keywords.pdbx_keywords Transferase/DNA _struct_keywords.text 'Ternary complex of Dpo4-DNA-dTTP, DNA Polymerase, DNA Adduct, Transferase-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 7 ? J N N 7 ? K N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DPO4_SACS2 Q97W02 ? 1 ;MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI ; 1 2 PDB 3PW5 3PW5 ? 2 ? 1 3 PDB 3PW5 3PW5 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3PW5 A 7 ? 347 ? Q97W02 1 ? 341 ? 2 342 2 2 3PW5 B 1 ? 15 ? 3PW5 372 ? 386 ? 372 386 3 3 3PW5 C 1 ? 13 ? 3PW5 347 ? 359 ? 347 359 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3PW5 HIS A 1 ? UNP Q97W02 ? ? 'expression tag' -4 1 1 3PW5 HIS A 2 ? UNP Q97W02 ? ? 'expression tag' -3 2 1 3PW5 HIS A 3 ? UNP Q97W02 ? ? 'expression tag' -2 3 1 3PW5 HIS A 4 ? UNP Q97W02 ? ? 'expression tag' -1 4 1 3PW5 HIS A 5 ? UNP Q97W02 ? ? 'expression tag' 0 5 1 3PW5 HIS A 6 ? UNP Q97W02 ? ? 'expression tag' 1 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5790 ? 1 MORE -72 ? 1 'SSA (A^2)' 20080 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 16 ? LEU A 25 ? TYR A 11 LEU A 20 1 ? 10 HELX_P HELX_P2 2 ASN A 26 ? LYS A 30 ? ASN A 21 LYS A 25 5 ? 5 HELX_P HELX_P3 3 ASN A 53 ? PHE A 59 ? ASN A 48 PHE A 54 1 ? 7 HELX_P HELX_P4 4 PRO A 66 ? LYS A 72 ? PRO A 61 LYS A 67 1 ? 7 HELX_P HELX_P5 5 ARG A 83 ? LEU A 98 ? ARG A 78 LEU A 93 1 ? 16 HELX_P HELX_P6 6 ARG A 99 ? SER A 102 ? ARG A 94 SER A 97 5 ? 4 HELX_P HELX_P7 7 ASP A 123 ? GLU A 142 ? ASP A 118 GLU A 137 1 ? 20 HELX_P HELX_P8 8 ASN A 153 ? ALA A 164 ? ASN A 148 ALA A 159 1 ? 12 HELX_P HELX_P9 9 ASP A 173 ? LEU A 184 ? ASP A 168 LEU A 179 1 ? 12 HELX_P HELX_P10 10 ASP A 185 ? VAL A 189 ? ASP A 180 VAL A 184 5 ? 5 HELX_P HELX_P11 11 GLY A 193 ? LYS A 202 ? GLY A 188 LYS A 197 1 ? 10 HELX_P HELX_P12 12 LYS A 207 ? SER A 213 ? LYS A 202 SER A 208 5 ? 7 HELX_P HELX_P13 13 GLU A 215 ? LYS A 220 ? GLU A 210 LYS A 215 1 ? 6 HELX_P HELX_P14 14 GLY A 224 ? ARG A 236 ? GLY A 219 ARG A 231 1 ? 13 HELX_P HELX_P15 15 ASN A 263 ? ASP A 283 ? ASN A 258 ASP A 278 1 ? 21 HELX_P HELX_P16 16 SER A 313 ? ASP A 332 ? SER A 308 ASP A 327 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? B DG 3 N7 ? ? ? 1_555 H AFN . C8A ? ? B DG 374 B AFN 387 1_555 ? ? ? ? ? ? ? 1.576 sing ? metalc1 metalc ? ? A ASP 13 OD1 ? ? ? 1_555 E CA . CA ? ? A ASP 8 A CA 1001 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc2 metalc ? ? A ASP 13 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 8 A CA 1002 1_555 ? ? ? ? ? ? ? 3.127 ? ? metalc3 metalc ? ? A PHE 14 O ? ? ? 1_555 E CA . CA ? ? A PHE 9 A CA 1001 1_555 ? ? ? ? ? ? ? 2.413 ? ? metalc4 metalc ? ? A ASP 111 OD2 ? ? ? 1_555 E CA . CA ? ? A ASP 106 A CA 1001 1_555 ? ? ? ? ? ? ? 2.769 ? ? metalc5 metalc ? ? A ASP 111 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 106 A CA 1002 1_555 ? ? ? ? ? ? ? 2.745 ? ? metalc6 metalc ? ? A GLU 112 OE2 ? ? ? 1_555 F CA . CA ? ? A GLU 107 A CA 1002 1_555 ? ? ? ? ? ? ? 2.790 ? ? metalc7 metalc ? ? A ALA 187 O ? ? ? 1_555 G CA . CA ? ? A ALA 182 A CA 1003 1_555 ? ? ? ? ? ? ? 2.814 ? ? metalc8 metalc ? ? A ILE 192 O ? ? ? 1_555 G CA . CA ? ? A ILE 187 A CA 1003 1_555 ? ? ? ? ? ? ? 2.795 ? ? metalc9 metalc ? ? D TTP . O2B ? ? ? 1_555 E CA . CA ? ? A TTP 400 A CA 1001 1_555 ? ? ? ? ? ? ? 2.363 ? ? metalc10 metalc ? ? D TTP . O1A ? ? ? 1_555 E CA . CA ? ? A TTP 400 A CA 1001 1_555 ? ? ? ? ? ? ? 2.852 ? ? metalc11 metalc ? ? D TTP . O3A ? ? ? 1_555 E CA . CA ? ? A TTP 400 A CA 1001 1_555 ? ? ? ? ? ? ? 3.141 ? ? metalc12 metalc ? ? D TTP . O1A ? ? ? 1_555 F CA . CA ? ? A TTP 400 A CA 1002 1_555 ? ? ? ? ? ? ? 3.057 ? ? metalc13 metalc ? ? D TTP . O2A ? ? ? 1_555 F CA . CA ? ? A TTP 400 A CA 1002 1_555 ? ? ? ? ? ? ? 3.174 ? ? metalc14 metalc ? ? G CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 1003 A HOH 2001 1_555 ? ? ? ? ? ? ? 2.703 ? ? hydrog1 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 13 N3 ? ? B DG 374 C DC 359 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 13 O2 ? ? B DG 374 C DC 359 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 13 N4 ? ? B DG 374 C DC 359 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 12 N3 ? ? B DA 375 C DT 358 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 12 O4 ? ? B DA 375 C DT 358 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 376 C DT 357 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 376 C DT 357 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 10 N1 ? ? B DT 377 C DA 356 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 10 N6 ? ? B DT 377 C DA 356 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 9 N1 ? ? B DC 378 C DG 355 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 9 O6 ? ? B DC 378 C DG 355 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 9 N2 ? ? B DC 378 C DG 355 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 379 C DG 354 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 379 C DG 354 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 379 C DG 354 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 7 N1 ? ? B DT 380 C DA 353 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 7 N6 ? ? B DT 380 C DA 353 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 381 C DA 352 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 381 C DA 352 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DC 382 C DG 351 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DC 382 C DG 351 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 382 C DG 351 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 383 C DG 350 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 383 C DG 350 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 383 C DG 350 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 384 C DG 349 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 384 C DG 349 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 384 C DG 349 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 14 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 385 C DG 348 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 14 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 385 C DG 348 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 14 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 385 C DG 348 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 386 C DG 347 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 386 C DG 347 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 386 C DG 347 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O ? A PHE 14 ? A PHE 9 ? 1_555 88.3 ? 2 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 70.3 ? 3 O ? A PHE 14 ? A PHE 9 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 112.5 ? 4 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2B ? D TTP . ? A TTP 400 ? 1_555 126.8 ? 5 O ? A PHE 14 ? A PHE 9 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2B ? D TTP . ? A TTP 400 ? 1_555 73.7 ? 6 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O2B ? D TTP . ? A TTP 400 ? 1_555 162.7 ? 7 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O1A ? D TTP . ? A TTP 400 ? 1_555 134.2 ? 8 O ? A PHE 14 ? A PHE 9 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O1A ? D TTP . ? A TTP 400 ? 1_555 133.0 ? 9 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O1A ? D TTP . ? A TTP 400 ? 1_555 74.9 ? 10 O2B ? D TTP . ? A TTP 400 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O1A ? D TTP . ? A TTP 400 ? 1_555 89.1 ? 11 OD1 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O3A ? D TTP . ? A TTP 400 ? 1_555 134.3 ? 12 O ? A PHE 14 ? A PHE 9 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O3A ? D TTP . ? A TTP 400 ? 1_555 121.5 ? 13 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O3A ? D TTP . ? A TTP 400 ? 1_555 118.3 ? 14 O2B ? D TTP . ? A TTP 400 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O3A ? D TTP . ? A TTP 400 ? 1_555 49.7 ? 15 O1A ? D TTP . ? A TTP 400 ? 1_555 CA ? E CA . ? A CA 1001 ? 1_555 O3A ? D TTP . ? A TTP 400 ? 1_555 47.2 ? 16 OD2 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 91.6 ? 17 OD2 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OE2 ? A GLU 112 ? A GLU 107 ? 1_555 130.0 ? 18 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 OE2 ? A GLU 112 ? A GLU 107 ? 1_555 87.8 ? 19 OD2 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O1A ? D TTP . ? A TTP 400 ? 1_555 124.6 ? 20 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O1A ? D TTP . ? A TTP 400 ? 1_555 72.0 ? 21 OE2 ? A GLU 112 ? A GLU 107 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O1A ? D TTP . ? A TTP 400 ? 1_555 102.6 ? 22 OD2 ? A ASP 13 ? A ASP 8 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O2A ? D TTP . ? A TTP 400 ? 1_555 125.4 ? 23 OD2 ? A ASP 111 ? A ASP 106 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O2A ? D TTP . ? A TTP 400 ? 1_555 118.4 ? 24 OE2 ? A GLU 112 ? A GLU 107 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O2A ? D TTP . ? A TTP 400 ? 1_555 97.9 ? 25 O1A ? D TTP . ? A TTP 400 ? 1_555 CA ? F CA . ? A CA 1002 ? 1_555 O2A ? D TTP . ? A TTP 400 ? 1_555 46.7 ? 26 O ? A ALA 187 ? A ALA 182 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? A ILE 192 ? A ILE 187 ? 1_555 83.5 ? 27 O ? A ALA 187 ? A ALA 182 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? I HOH . ? A HOH 2001 ? 1_555 61.4 ? 28 O ? A ILE 192 ? A ILE 187 ? 1_555 CA ? G CA . ? A CA 1003 ? 1_555 O ? I HOH . ? A HOH 2001 ? 1_555 141.4 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 165 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 160 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 166 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 161 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 112 ? ASP A 116 ? GLU A 107 ASP A 111 A 2 VAL A 9 ? PHE A 14 ? VAL A 4 PHE A 9 A 3 VAL A 146 ? SER A 151 ? VAL A 141 SER A 146 A 4 ILE A 169 ? VAL A 171 ? ILE A 164 VAL A 166 B 1 GLY A 47 ? ALA A 52 ? GLY A 42 ALA A 47 B 2 VAL A 34 ? PHE A 39 ? VAL A 29 PHE A 34 B 3 VAL A 78 ? PRO A 81 ? VAL A 73 PRO A 76 C 1 SER A 250 ? SER A 261 ? SER A 245 SER A 256 C 2 ILE A 336 ? PHE A 346 ? ILE A 331 PHE A 341 C 3 PRO A 287 ? THR A 296 ? PRO A 282 THR A 291 C 4 ILE A 301 ? THR A 307 ? ILE A 296 THR A 302 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 115 ? O LEU A 110 N LEU A 10 ? N LEU A 5 A 2 3 N VAL A 9 ? N VAL A 4 O SER A 151 ? O SER A 146 A 3 4 N ILE A 150 ? N ILE A 145 O LYS A 170 ? O LYS A 165 B 1 2 O THR A 51 ? O THR A 46 N VAL A 36 ? N VAL A 31 B 2 3 N CYS A 37 ? N CYS A 32 O LEU A 80 ? O LEU A 75 C 1 2 N ILE A 251 ? N ILE A 246 O PHE A 343 ? O PHE A 338 C 2 3 O ARG A 337 ? O ARG A 332 N VAL A 295 ? N VAL A 290 C 3 4 N ALA A 294 ? N ALA A 289 O VAL A 302 ? O VAL A 297 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A TTP 400 ? 14 'BINDING SITE FOR RESIDUE TTP A 400' AC2 Software A CA 1001 ? 5 'BINDING SITE FOR RESIDUE CA A 1001' AC3 Software A CA 1002 ? 5 'BINDING SITE FOR RESIDUE CA A 1002' AC4 Software A CA 1003 ? 3 'BINDING SITE FOR RESIDUE CA A 1003' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 PHE A 14 ? PHE A 9 . ? 1_555 ? 2 AC1 14 ASP A 15 ? ASP A 10 . ? 1_555 ? 3 AC1 14 TYR A 16 ? TYR A 11 . ? 1_555 ? 4 AC1 14 PHE A 17 ? PHE A 12 . ? 1_555 ? 5 AC1 14 TYR A 18 ? TYR A 13 . ? 1_555 ? 6 AC1 14 ALA A 50 ? ALA A 45 . ? 1_555 ? 7 AC1 14 TYR A 54 ? TYR A 49 . ? 1_555 ? 8 AC1 14 ARG A 57 ? ARG A 52 . ? 1_555 ? 9 AC1 14 ASP A 111 ? ASP A 106 . ? 1_555 ? 10 AC1 14 CA E . ? CA A 1001 . ? 1_555 ? 11 AC1 14 CA F . ? CA A 1002 . ? 1_555 ? 12 AC1 14 HOH I . ? HOH A 2002 . ? 1_555 ? 13 AC1 14 DT B 2 ? DT B 373 . ? 1_555 ? 14 AC1 14 HOH J . ? HOH B 2012 . ? 1_555 ? 15 AC2 5 ASP A 13 ? ASP A 8 . ? 1_555 ? 16 AC2 5 PHE A 14 ? PHE A 9 . ? 1_555 ? 17 AC2 5 ASP A 111 ? ASP A 106 . ? 1_555 ? 18 AC2 5 TTP D . ? TTP A 400 . ? 1_555 ? 19 AC2 5 CA F . ? CA A 1002 . ? 1_555 ? 20 AC3 5 ASP A 13 ? ASP A 8 . ? 1_555 ? 21 AC3 5 ASP A 111 ? ASP A 106 . ? 1_555 ? 22 AC3 5 GLU A 112 ? GLU A 107 . ? 1_555 ? 23 AC3 5 TTP D . ? TTP A 400 . ? 1_555 ? 24 AC3 5 CA E . ? CA A 1001 . ? 1_555 ? 25 AC4 3 ALA A 187 ? ALA A 182 . ? 1_555 ? 26 AC4 3 ILE A 192 ? ILE A 187 . ? 1_555 ? 27 AC4 3 HOH I . ? HOH A 2001 . ? 1_555 ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 2018 ? ? 1_555 O A HOH 2032 ? ? 1_556 2.16 2 1 O A HOH 2023 ? ? 1_555 O A HOH 2034 ? ? 1_554 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C5 B DG 374 ? ? C6 B DG 374 ? ? 1.490 1.419 0.071 0.010 N 2 1 C5 B DG 374 ? ? N7 B DG 374 ? ? 1.447 1.388 0.059 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C2 B DG 374 ? ? N3 B DG 374 ? ? C4 B DG 374 ? ? 115.02 111.90 3.12 0.50 N 2 1 C5 B DG 374 ? ? N7 B DG 374 ? ? C8 B DG 374 ? ? 101.27 104.30 -3.03 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 11 ? ? 20.31 52.48 2 1 ASN A 21 ? ? -162.09 74.16 3 1 PRO A 22 ? ? -37.62 -31.47 4 1 LYS A 25 ? ? -39.35 150.60 5 1 PHE A 38 ? ? -173.63 -174.20 6 1 PRO A 70 ? ? -50.26 -8.83 7 1 SER A 97 ? ? 165.13 106.23 8 1 GLU A 101 ? ? -94.77 -76.30 9 1 ILE A 102 ? ? 91.04 78.44 10 1 SER A 104 ? ? -161.35 -162.61 11 1 ASP A 111 ? ? -103.50 77.54 12 1 SER A 146 ? ? -166.48 -166.68 13 1 PRO A 185 ? ? -46.87 108.35 14 1 LYS A 197 ? ? -86.53 48.03 15 1 LEU A 198 ? ? -150.92 -1.62 16 1 ASP A 232 ? ? 85.04 25.35 17 1 ASN A 235 ? ? -153.04 51.75 18 1 ARG A 248 ? ? -171.96 126.09 19 1 ASP A 278 ? ? 59.16 -74.43 20 1 ARG A 301 ? ? -172.68 124.99 21 1 SER A 339 ? ? -132.71 -159.21 22 1 LYS A 340 ? ? 35.52 74.36 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C4'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id B _pdbx_validate_chiral.auth_comp_id DG _pdbx_validate_chiral.auth_seq_id 374 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2010 ? 9.03 . 2 1 O ? A HOH 2020 ? 6.25 . 3 1 O ? A HOH 2025 ? 7.37 . 4 1 O ? A HOH 2027 ? 6.70 . 5 1 O ? A HOH 2028 ? 6.75 . 6 1 O ? A HOH 2030 ? 9.07 . 7 1 O ? A HOH 2035 ? 6.81 . 8 1 O ? A HOH 2038 ? 8.49 . 9 1 O ? A HOH 2050 ? 8.14 . 10 1 O ? A HOH 2051 ? 7.45 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS -4 ? A HIS 1 2 1 Y 1 A HIS -3 ? A HIS 2 3 1 Y 1 A HIS -2 ? A HIS 3 4 1 Y 1 A HIS -1 ? A HIS 4 5 1 Y 1 A HIS 0 ? A HIS 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AFN C8A C N N 1 AFN C9 C N R 2 AFN O9 O N N 3 AFN C9A C N R 4 AFN C9B C Y N 5 AFN O7 O N N 6 AFN C6A C N R 7 AFN O6A O N N 8 AFN C5A C Y N 9 AFN C5B C Y N 10 AFN C4B C Y N 11 AFN O4 O N N 12 AFN CM C N N 13 AFN C4A C Y N 14 AFN C10 C Y N 15 AFN O10 O Y N 16 AFN C11 C Y N 17 AFN O11 O N N 18 AFN C12 C Y N 19 AFN C3A C Y N 20 AFN C3 C N N 21 AFN C2A C N N 22 AFN C1 C N N 23 AFN O1 O N N 24 AFN H8A2 H N N 25 AFN H8A H N N 26 AFN H9 H N N 27 AFN HO9 H N N 28 AFN H9A H N N 29 AFN H6A H N N 30 AFN H5B H N N 31 AFN HM1 H N N 32 AFN HM2 H N N 33 AFN HM3 H N N 34 AFN H31 H N N 35 AFN H32 H N N 36 AFN H2A1 H N N 37 AFN H2A2 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CA CA CA N N 112 CYS N N N N 113 CYS CA C N R 114 CYS C C N N 115 CYS O O N N 116 CYS CB C N N 117 CYS SG S N N 118 CYS OXT O N N 119 CYS H H N N 120 CYS H2 H N N 121 CYS HA H N N 122 CYS HB2 H N N 123 CYS HB3 H N N 124 CYS HG H N N 125 CYS HXT H N N 126 DA OP3 O N N 127 DA P P N N 128 DA OP1 O N N 129 DA OP2 O N N 130 DA "O5'" O N N 131 DA "C5'" C N N 132 DA "C4'" C N R 133 DA "O4'" O N N 134 DA "C3'" C N S 135 DA "O3'" O N N 136 DA "C2'" C N N 137 DA "C1'" C N R 138 DA N9 N Y N 139 DA C8 C Y N 140 DA N7 N Y N 141 DA C5 C Y N 142 DA C6 C Y N 143 DA N6 N N N 144 DA N1 N Y N 145 DA C2 C Y N 146 DA N3 N Y N 147 DA C4 C Y N 148 DA HOP3 H N N 149 DA HOP2 H N N 150 DA "H5'" H N N 151 DA "H5''" H N N 152 DA "H4'" H N N 153 DA "H3'" H N N 154 DA "HO3'" H N N 155 DA "H2'" H N N 156 DA "H2''" H N N 157 DA "H1'" H N N 158 DA H8 H N N 159 DA H61 H N N 160 DA H62 H N N 161 DA H2 H N N 162 DC OP3 O N N 163 DC P P N N 164 DC OP1 O N N 165 DC OP2 O N N 166 DC "O5'" O N N 167 DC "C5'" C N N 168 DC "C4'" C N R 169 DC "O4'" O N N 170 DC "C3'" C N S 171 DC "O3'" O N N 172 DC "C2'" C N N 173 DC "C1'" C N R 174 DC N1 N N N 175 DC C2 C N N 176 DC O2 O N N 177 DC N3 N N N 178 DC C4 C N N 179 DC N4 N N N 180 DC C5 C N N 181 DC C6 C N N 182 DC HOP3 H N N 183 DC HOP2 H N N 184 DC "H5'" H N N 185 DC "H5''" H N N 186 DC "H4'" H N N 187 DC "H3'" H N N 188 DC "HO3'" H N N 189 DC "H2'" H N N 190 DC "H2''" H N N 191 DC "H1'" H N N 192 DC H41 H N N 193 DC H42 H N N 194 DC H5 H N N 195 DC H6 H N N 196 DG OP3 O N N 197 DG P P N N 198 DG OP1 O N N 199 DG OP2 O N N 200 DG "O5'" O N N 201 DG "C5'" C N N 202 DG "C4'" C N R 203 DG "O4'" O N N 204 DG "C3'" C N S 205 DG "O3'" O N N 206 DG "C2'" C N N 207 DG "C1'" C N R 208 DG N9 N Y N 209 DG C8 C Y N 210 DG N7 N Y N 211 DG C5 C Y N 212 DG C6 C N N 213 DG O6 O N N 214 DG N1 N N N 215 DG C2 C N N 216 DG N2 N N N 217 DG N3 N N N 218 DG C4 C Y N 219 DG HOP3 H N N 220 DG HOP2 H N N 221 DG "H5'" H N N 222 DG "H5''" H N N 223 DG "H4'" H N N 224 DG "H3'" H N N 225 DG "HO3'" H N N 226 DG "H2'" H N N 227 DG "H2''" H N N 228 DG "H1'" H N N 229 DG H8 H N N 230 DG H1 H N N 231 DG H21 H N N 232 DG H22 H N N 233 DT OP3 O N N 234 DT P P N N 235 DT OP1 O N N 236 DT OP2 O N N 237 DT "O5'" O N N 238 DT "C5'" C N N 239 DT "C4'" C N R 240 DT "O4'" O N N 241 DT "C3'" C N S 242 DT "O3'" O N N 243 DT "C2'" C N N 244 DT "C1'" C N R 245 DT N1 N N N 246 DT C2 C N N 247 DT O2 O N N 248 DT N3 N N N 249 DT C4 C N N 250 DT O4 O N N 251 DT C5 C N N 252 DT C7 C N N 253 DT C6 C N N 254 DT HOP3 H N N 255 DT HOP2 H N N 256 DT "H5'" H N N 257 DT "H5''" H N N 258 DT "H4'" H N N 259 DT "H3'" H N N 260 DT "HO3'" H N N 261 DT "H2'" H N N 262 DT "H2''" H N N 263 DT "H1'" H N N 264 DT H3 H N N 265 DT H71 H N N 266 DT H72 H N N 267 DT H73 H N N 268 DT H6 H N N 269 GLN N N N N 270 GLN CA C N S 271 GLN C C N N 272 GLN O O N N 273 GLN CB C N N 274 GLN CG C N N 275 GLN CD C N N 276 GLN OE1 O N N 277 GLN NE2 N N N 278 GLN OXT O N N 279 GLN H H N N 280 GLN H2 H N N 281 GLN HA H N N 282 GLN HB2 H N N 283 GLN HB3 H N N 284 GLN HG2 H N N 285 GLN HG3 H N N 286 GLN HE21 H N N 287 GLN HE22 H N N 288 GLN HXT H N N 289 GLU N N N N 290 GLU CA C N S 291 GLU C C N N 292 GLU O O N N 293 GLU CB C N N 294 GLU CG C N N 295 GLU CD C N N 296 GLU OE1 O N N 297 GLU OE2 O N N 298 GLU OXT O N N 299 GLU H H N N 300 GLU H2 H N N 301 GLU HA H N N 302 GLU HB2 H N N 303 GLU HB3 H N N 304 GLU HG2 H N N 305 GLU HG3 H N N 306 GLU HE2 H N N 307 GLU HXT H N N 308 GLY N N N N 309 GLY CA C N N 310 GLY C C N N 311 GLY O O N N 312 GLY OXT O N N 313 GLY H H N N 314 GLY H2 H N N 315 GLY HA2 H N N 316 GLY HA3 H N N 317 GLY HXT H N N 318 HIS N N N N 319 HIS CA C N S 320 HIS C C N N 321 HIS O O N N 322 HIS CB C N N 323 HIS CG C Y N 324 HIS ND1 N Y N 325 HIS CD2 C Y N 326 HIS CE1 C Y N 327 HIS NE2 N Y N 328 HIS OXT O N N 329 HIS H H N N 330 HIS H2 H N N 331 HIS HA H N N 332 HIS HB2 H N N 333 HIS HB3 H N N 334 HIS HD1 H N N 335 HIS HD2 H N N 336 HIS HE1 H N N 337 HIS HE2 H N N 338 HIS HXT H N N 339 HOH O O N N 340 HOH H1 H N N 341 HOH H2 H N N 342 ILE N N N N 343 ILE CA C N S 344 ILE C C N N 345 ILE O O N N 346 ILE CB C N S 347 ILE CG1 C N N 348 ILE CG2 C N N 349 ILE CD1 C N N 350 ILE OXT O N N 351 ILE H H N N 352 ILE H2 H N N 353 ILE HA H N N 354 ILE HB H N N 355 ILE HG12 H N N 356 ILE HG13 H N N 357 ILE HG21 H N N 358 ILE HG22 H N N 359 ILE HG23 H N N 360 ILE HD11 H N N 361 ILE HD12 H N N 362 ILE HD13 H N N 363 ILE HXT H N N 364 LEU N N N N 365 LEU CA C N S 366 LEU C C N N 367 LEU O O N N 368 LEU CB C N N 369 LEU CG C N N 370 LEU CD1 C N N 371 LEU CD2 C N N 372 LEU OXT O N N 373 LEU H H N N 374 LEU H2 H N N 375 LEU HA H N N 376 LEU HB2 H N N 377 LEU HB3 H N N 378 LEU HG H N N 379 LEU HD11 H N N 380 LEU HD12 H N N 381 LEU HD13 H N N 382 LEU HD21 H N N 383 LEU HD22 H N N 384 LEU HD23 H N N 385 LEU HXT H N N 386 LYS N N N N 387 LYS CA C N S 388 LYS C C N N 389 LYS O O N N 390 LYS CB C N N 391 LYS CG C N N 392 LYS CD C N N 393 LYS CE C N N 394 LYS NZ N N N 395 LYS OXT O N N 396 LYS H H N N 397 LYS H2 H N N 398 LYS HA H N N 399 LYS HB2 H N N 400 LYS HB3 H N N 401 LYS HG2 H N N 402 LYS HG3 H N N 403 LYS HD2 H N N 404 LYS HD3 H N N 405 LYS HE2 H N N 406 LYS HE3 H N N 407 LYS HZ1 H N N 408 LYS HZ2 H N N 409 LYS HZ3 H N N 410 LYS HXT H N N 411 MET N N N N 412 MET CA C N S 413 MET C C N N 414 MET O O N N 415 MET CB C N N 416 MET CG C N N 417 MET SD S N N 418 MET CE C N N 419 MET OXT O N N 420 MET H H N N 421 MET H2 H N N 422 MET HA H N N 423 MET HB2 H N N 424 MET HB3 H N N 425 MET HG2 H N N 426 MET HG3 H N N 427 MET HE1 H N N 428 MET HE2 H N N 429 MET HE3 H N N 430 MET HXT H N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PRO N N N N 455 PRO CA C N S 456 PRO C C N N 457 PRO O O N N 458 PRO CB C N N 459 PRO CG C N N 460 PRO CD C N N 461 PRO OXT O N N 462 PRO H H N N 463 PRO HA H N N 464 PRO HB2 H N N 465 PRO HB3 H N N 466 PRO HG2 H N N 467 PRO HG3 H N N 468 PRO HD2 H N N 469 PRO HD3 H N N 470 PRO HXT H N N 471 SER N N N N 472 SER CA C N S 473 SER C C N N 474 SER O O N N 475 SER CB C N N 476 SER OG O N N 477 SER OXT O N N 478 SER H H N N 479 SER H2 H N N 480 SER HA H N N 481 SER HB2 H N N 482 SER HB3 H N N 483 SER HG H N N 484 SER HXT H N N 485 THR N N N N 486 THR CA C N S 487 THR C C N N 488 THR O O N N 489 THR CB C N R 490 THR OG1 O N N 491 THR CG2 C N N 492 THR OXT O N N 493 THR H H N N 494 THR H2 H N N 495 THR HA H N N 496 THR HB H N N 497 THR HG1 H N N 498 THR HG21 H N N 499 THR HG22 H N N 500 THR HG23 H N N 501 THR HXT H N N 502 TTP PA P N S 503 TTP O1A O N N 504 TTP O2A O N N 505 TTP O3A O N N 506 TTP PB P N S 507 TTP O1B O N N 508 TTP O2B O N N 509 TTP O3B O N N 510 TTP PG P N N 511 TTP O1G O N N 512 TTP O2G O N N 513 TTP O3G O N N 514 TTP "O5'" O N N 515 TTP "C5'" C N N 516 TTP "C4'" C N R 517 TTP "O4'" O N N 518 TTP "C3'" C N S 519 TTP "O3'" O N N 520 TTP "C2'" C N N 521 TTP "C1'" C N R 522 TTP N1 N N N 523 TTP C2 C N N 524 TTP O2 O N N 525 TTP N3 N N N 526 TTP C4 C N N 527 TTP O4 O N N 528 TTP C5 C N N 529 TTP C5M C N N 530 TTP C6 C N N 531 TTP HOA2 H N N 532 TTP HOB2 H N N 533 TTP HOG2 H N N 534 TTP HOG3 H N N 535 TTP "H5'1" H N N 536 TTP "H5'2" H N N 537 TTP "H4'" H N N 538 TTP "H3'" H N N 539 TTP "HO3'" H N N 540 TTP "H2'1" H N N 541 TTP "H2'2" H N N 542 TTP "H1'" H N N 543 TTP HN3 H N N 544 TTP HM51 H N N 545 TTP HM52 H N N 546 TTP HM53 H N N 547 TTP H6 H N N 548 TYR N N N N 549 TYR CA C N S 550 TYR C C N N 551 TYR O O N N 552 TYR CB C N N 553 TYR CG C Y N 554 TYR CD1 C Y N 555 TYR CD2 C Y N 556 TYR CE1 C Y N 557 TYR CE2 C Y N 558 TYR CZ C Y N 559 TYR OH O N N 560 TYR OXT O N N 561 TYR H H N N 562 TYR H2 H N N 563 TYR HA H N N 564 TYR HB2 H N N 565 TYR HB3 H N N 566 TYR HD1 H N N 567 TYR HD2 H N N 568 TYR HE1 H N N 569 TYR HE2 H N N 570 TYR HH H N N 571 TYR HXT H N N 572 VAL N N N N 573 VAL CA C N S 574 VAL C C N N 575 VAL O O N N 576 VAL CB C N N 577 VAL CG1 C N N 578 VAL CG2 C N N 579 VAL OXT O N N 580 VAL H H N N 581 VAL H2 H N N 582 VAL HA H N N 583 VAL HB H N N 584 VAL HG11 H N N 585 VAL HG12 H N N 586 VAL HG13 H N N 587 VAL HG21 H N N 588 VAL HG22 H N N 589 VAL HG23 H N N 590 VAL HXT H N N 591 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AFN C8A C9 sing N N 1 AFN C8A O7 sing N N 2 AFN C8A H8A2 sing N N 3 AFN C8A H8A sing N N 4 AFN C9 O9 sing N N 5 AFN C9 C9A sing N N 6 AFN C9 H9 sing N N 7 AFN O9 HO9 sing N N 8 AFN C9A C9B sing N N 9 AFN C9A C6A sing N N 10 AFN C9A H9A sing N N 11 AFN C9B C5A doub Y N 12 AFN C9B C10 sing Y N 13 AFN O7 C6A sing N N 14 AFN C6A O6A sing N N 15 AFN C6A H6A sing N N 16 AFN O6A C5A sing N N 17 AFN C5A C5B sing Y N 18 AFN C5B C4B doub Y N 19 AFN C5B H5B sing N N 20 AFN C4B O4 sing N N 21 AFN C4B C4A sing Y N 22 AFN O4 CM sing N N 23 AFN CM HM1 sing N N 24 AFN CM HM2 sing N N 25 AFN CM HM3 sing N N 26 AFN C4A C10 doub Y N 27 AFN C4A C3A sing Y N 28 AFN C10 O10 sing Y N 29 AFN O10 C11 sing Y N 30 AFN C11 O11 doub N N 31 AFN C11 C12 sing Y N 32 AFN C12 C3A doub Y N 33 AFN C12 C1 sing N N 34 AFN C3A C3 sing N N 35 AFN C3 C2A sing N N 36 AFN C3 H31 sing N N 37 AFN C3 H32 sing N N 38 AFN C2A C1 sing N N 39 AFN C2A H2A1 sing N N 40 AFN C2A H2A2 sing N N 41 AFN C1 O1 doub N N 42 ALA N CA sing N N 43 ALA N H sing N N 44 ALA N H2 sing N N 45 ALA CA C sing N N 46 ALA CA CB sing N N 47 ALA CA HA sing N N 48 ALA C O doub N N 49 ALA C OXT sing N N 50 ALA CB HB1 sing N N 51 ALA CB HB2 sing N N 52 ALA CB HB3 sing N N 53 ALA OXT HXT sing N N 54 ARG N CA sing N N 55 ARG N H sing N N 56 ARG N H2 sing N N 57 ARG CA C sing N N 58 ARG CA CB sing N N 59 ARG CA HA sing N N 60 ARG C O doub N N 61 ARG C OXT sing N N 62 ARG CB CG sing N N 63 ARG CB HB2 sing N N 64 ARG CB HB3 sing N N 65 ARG CG CD sing N N 66 ARG CG HG2 sing N N 67 ARG CG HG3 sing N N 68 ARG CD NE sing N N 69 ARG CD HD2 sing N N 70 ARG CD HD3 sing N N 71 ARG NE CZ sing N N 72 ARG NE HE sing N N 73 ARG CZ NH1 sing N N 74 ARG CZ NH2 doub N N 75 ARG NH1 HH11 sing N N 76 ARG NH1 HH12 sing N N 77 ARG NH2 HH21 sing N N 78 ARG NH2 HH22 sing N N 79 ARG OXT HXT sing N N 80 ASN N CA sing N N 81 ASN N H sing N N 82 ASN N H2 sing N N 83 ASN CA C sing N N 84 ASN CA CB sing N N 85 ASN CA HA sing N N 86 ASN C O doub N N 87 ASN C OXT sing N N 88 ASN CB CG sing N N 89 ASN CB HB2 sing N N 90 ASN CB HB3 sing N N 91 ASN CG OD1 doub N N 92 ASN CG ND2 sing N N 93 ASN ND2 HD21 sing N N 94 ASN ND2 HD22 sing N N 95 ASN OXT HXT sing N N 96 ASP N CA sing N N 97 ASP N H sing N N 98 ASP N H2 sing N N 99 ASP CA C sing N N 100 ASP CA CB sing N N 101 ASP CA HA sing N N 102 ASP C O doub N N 103 ASP C OXT sing N N 104 ASP CB CG sing N N 105 ASP CB HB2 sing N N 106 ASP CB HB3 sing N N 107 ASP CG OD1 doub N N 108 ASP CG OD2 sing N N 109 ASP OD2 HD2 sing N N 110 ASP OXT HXT sing N N 111 CYS N CA sing N N 112 CYS N H sing N N 113 CYS N H2 sing N N 114 CYS CA C sing N N 115 CYS CA CB sing N N 116 CYS CA HA sing N N 117 CYS C O doub N N 118 CYS C OXT sing N N 119 CYS CB SG sing N N 120 CYS CB HB2 sing N N 121 CYS CB HB3 sing N N 122 CYS SG HG sing N N 123 CYS OXT HXT sing N N 124 DA OP3 P sing N N 125 DA OP3 HOP3 sing N N 126 DA P OP1 doub N N 127 DA P OP2 sing N N 128 DA P "O5'" sing N N 129 DA OP2 HOP2 sing N N 130 DA "O5'" "C5'" sing N N 131 DA "C5'" "C4'" sing N N 132 DA "C5'" "H5'" sing N N 133 DA "C5'" "H5''" sing N N 134 DA "C4'" "O4'" sing N N 135 DA "C4'" "C3'" sing N N 136 DA "C4'" "H4'" sing N N 137 DA "O4'" "C1'" sing N N 138 DA "C3'" "O3'" sing N N 139 DA "C3'" "C2'" sing N N 140 DA "C3'" "H3'" sing N N 141 DA "O3'" "HO3'" sing N N 142 DA "C2'" "C1'" sing N N 143 DA "C2'" "H2'" sing N N 144 DA "C2'" "H2''" sing N N 145 DA "C1'" N9 sing N N 146 DA "C1'" "H1'" sing N N 147 DA N9 C8 sing Y N 148 DA N9 C4 sing Y N 149 DA C8 N7 doub Y N 150 DA C8 H8 sing N N 151 DA N7 C5 sing Y N 152 DA C5 C6 sing Y N 153 DA C5 C4 doub Y N 154 DA C6 N6 sing N N 155 DA C6 N1 doub Y N 156 DA N6 H61 sing N N 157 DA N6 H62 sing N N 158 DA N1 C2 sing Y N 159 DA C2 N3 doub Y N 160 DA C2 H2 sing N N 161 DA N3 C4 sing Y N 162 DC OP3 P sing N N 163 DC OP3 HOP3 sing N N 164 DC P OP1 doub N N 165 DC P OP2 sing N N 166 DC P "O5'" sing N N 167 DC OP2 HOP2 sing N N 168 DC "O5'" "C5'" sing N N 169 DC "C5'" "C4'" sing N N 170 DC "C5'" "H5'" sing N N 171 DC "C5'" "H5''" sing N N 172 DC "C4'" "O4'" sing N N 173 DC "C4'" "C3'" sing N N 174 DC "C4'" "H4'" sing N N 175 DC "O4'" "C1'" sing N N 176 DC "C3'" "O3'" sing N N 177 DC "C3'" "C2'" sing N N 178 DC "C3'" "H3'" sing N N 179 DC "O3'" "HO3'" sing N N 180 DC "C2'" "C1'" sing N N 181 DC "C2'" "H2'" sing N N 182 DC "C2'" "H2''" sing N N 183 DC "C1'" N1 sing N N 184 DC "C1'" "H1'" sing N N 185 DC N1 C2 sing N N 186 DC N1 C6 sing N N 187 DC C2 O2 doub N N 188 DC C2 N3 sing N N 189 DC N3 C4 doub N N 190 DC C4 N4 sing N N 191 DC C4 C5 sing N N 192 DC N4 H41 sing N N 193 DC N4 H42 sing N N 194 DC C5 C6 doub N N 195 DC C5 H5 sing N N 196 DC C6 H6 sing N N 197 DG OP3 P sing N N 198 DG OP3 HOP3 sing N N 199 DG P OP1 doub N N 200 DG P OP2 sing N N 201 DG P "O5'" sing N N 202 DG OP2 HOP2 sing N N 203 DG "O5'" "C5'" sing N N 204 DG "C5'" "C4'" sing N N 205 DG "C5'" "H5'" sing N N 206 DG "C5'" "H5''" sing N N 207 DG "C4'" "O4'" sing N N 208 DG "C4'" "C3'" sing N N 209 DG "C4'" "H4'" sing N N 210 DG "O4'" "C1'" sing N N 211 DG "C3'" "O3'" sing N N 212 DG "C3'" "C2'" sing N N 213 DG "C3'" "H3'" sing N N 214 DG "O3'" "HO3'" sing N N 215 DG "C2'" "C1'" sing N N 216 DG "C2'" "H2'" sing N N 217 DG "C2'" "H2''" sing N N 218 DG "C1'" N9 sing N N 219 DG "C1'" "H1'" sing N N 220 DG N9 C8 sing Y N 221 DG N9 C4 sing Y N 222 DG C8 N7 doub Y N 223 DG C8 H8 sing N N 224 DG N7 C5 sing Y N 225 DG C5 C6 sing N N 226 DG C5 C4 doub Y N 227 DG C6 O6 doub N N 228 DG C6 N1 sing N N 229 DG N1 C2 sing N N 230 DG N1 H1 sing N N 231 DG C2 N2 sing N N 232 DG C2 N3 doub N N 233 DG N2 H21 sing N N 234 DG N2 H22 sing N N 235 DG N3 C4 sing N N 236 DT OP3 P sing N N 237 DT OP3 HOP3 sing N N 238 DT P OP1 doub N N 239 DT P OP2 sing N N 240 DT P "O5'" sing N N 241 DT OP2 HOP2 sing N N 242 DT "O5'" "C5'" sing N N 243 DT "C5'" "C4'" sing N N 244 DT "C5'" "H5'" sing N N 245 DT "C5'" "H5''" sing N N 246 DT "C4'" "O4'" sing N N 247 DT "C4'" "C3'" sing N N 248 DT "C4'" "H4'" sing N N 249 DT "O4'" "C1'" sing N N 250 DT "C3'" "O3'" sing N N 251 DT "C3'" "C2'" sing N N 252 DT "C3'" "H3'" sing N N 253 DT "O3'" "HO3'" sing N N 254 DT "C2'" "C1'" sing N N 255 DT "C2'" "H2'" sing N N 256 DT "C2'" "H2''" sing N N 257 DT "C1'" N1 sing N N 258 DT "C1'" "H1'" sing N N 259 DT N1 C2 sing N N 260 DT N1 C6 sing N N 261 DT C2 O2 doub N N 262 DT C2 N3 sing N N 263 DT N3 C4 sing N N 264 DT N3 H3 sing N N 265 DT C4 O4 doub N N 266 DT C4 C5 sing N N 267 DT C5 C7 sing N N 268 DT C5 C6 doub N N 269 DT C7 H71 sing N N 270 DT C7 H72 sing N N 271 DT C7 H73 sing N N 272 DT C6 H6 sing N N 273 GLN N CA sing N N 274 GLN N H sing N N 275 GLN N H2 sing N N 276 GLN CA C sing N N 277 GLN CA CB sing N N 278 GLN CA HA sing N N 279 GLN C O doub N N 280 GLN C OXT sing N N 281 GLN CB CG sing N N 282 GLN CB HB2 sing N N 283 GLN CB HB3 sing N N 284 GLN CG CD sing N N 285 GLN CG HG2 sing N N 286 GLN CG HG3 sing N N 287 GLN CD OE1 doub N N 288 GLN CD NE2 sing N N 289 GLN NE2 HE21 sing N N 290 GLN NE2 HE22 sing N N 291 GLN OXT HXT sing N N 292 GLU N CA sing N N 293 GLU N H sing N N 294 GLU N H2 sing N N 295 GLU CA C sing N N 296 GLU CA CB sing N N 297 GLU CA HA sing N N 298 GLU C O doub N N 299 GLU C OXT sing N N 300 GLU CB CG sing N N 301 GLU CB HB2 sing N N 302 GLU CB HB3 sing N N 303 GLU CG CD sing N N 304 GLU CG HG2 sing N N 305 GLU CG HG3 sing N N 306 GLU CD OE1 doub N N 307 GLU CD OE2 sing N N 308 GLU OE2 HE2 sing N N 309 GLU OXT HXT sing N N 310 GLY N CA sing N N 311 GLY N H sing N N 312 GLY N H2 sing N N 313 GLY CA C sing N N 314 GLY CA HA2 sing N N 315 GLY CA HA3 sing N N 316 GLY C O doub N N 317 GLY C OXT sing N N 318 GLY OXT HXT sing N N 319 HIS N CA sing N N 320 HIS N H sing N N 321 HIS N H2 sing N N 322 HIS CA C sing N N 323 HIS CA CB sing N N 324 HIS CA HA sing N N 325 HIS C O doub N N 326 HIS C OXT sing N N 327 HIS CB CG sing N N 328 HIS CB HB2 sing N N 329 HIS CB HB3 sing N N 330 HIS CG ND1 sing Y N 331 HIS CG CD2 doub Y N 332 HIS ND1 CE1 doub Y N 333 HIS ND1 HD1 sing N N 334 HIS CD2 NE2 sing Y N 335 HIS CD2 HD2 sing N N 336 HIS CE1 NE2 sing Y N 337 HIS CE1 HE1 sing N N 338 HIS NE2 HE2 sing N N 339 HIS OXT HXT sing N N 340 HOH O H1 sing N N 341 HOH O H2 sing N N 342 ILE N CA sing N N 343 ILE N H sing N N 344 ILE N H2 sing N N 345 ILE CA C sing N N 346 ILE CA CB sing N N 347 ILE CA HA sing N N 348 ILE C O doub N N 349 ILE C OXT sing N N 350 ILE CB CG1 sing N N 351 ILE CB CG2 sing N N 352 ILE CB HB sing N N 353 ILE CG1 CD1 sing N N 354 ILE CG1 HG12 sing N N 355 ILE CG1 HG13 sing N N 356 ILE CG2 HG21 sing N N 357 ILE CG2 HG22 sing N N 358 ILE CG2 HG23 sing N N 359 ILE CD1 HD11 sing N N 360 ILE CD1 HD12 sing N N 361 ILE CD1 HD13 sing N N 362 ILE OXT HXT sing N N 363 LEU N CA sing N N 364 LEU N H sing N N 365 LEU N H2 sing N N 366 LEU CA C sing N N 367 LEU CA CB sing N N 368 LEU CA HA sing N N 369 LEU C O doub N N 370 LEU C OXT sing N N 371 LEU CB CG sing N N 372 LEU CB HB2 sing N N 373 LEU CB HB3 sing N N 374 LEU CG CD1 sing N N 375 LEU CG CD2 sing N N 376 LEU CG HG sing N N 377 LEU CD1 HD11 sing N N 378 LEU CD1 HD12 sing N N 379 LEU CD1 HD13 sing N N 380 LEU CD2 HD21 sing N N 381 LEU CD2 HD22 sing N N 382 LEU CD2 HD23 sing N N 383 LEU OXT HXT sing N N 384 LYS N CA sing N N 385 LYS N H sing N N 386 LYS N H2 sing N N 387 LYS CA C sing N N 388 LYS CA CB sing N N 389 LYS CA HA sing N N 390 LYS C O doub N N 391 LYS C OXT sing N N 392 LYS CB CG sing N N 393 LYS CB HB2 sing N N 394 LYS CB HB3 sing N N 395 LYS CG CD sing N N 396 LYS CG HG2 sing N N 397 LYS CG HG3 sing N N 398 LYS CD CE sing N N 399 LYS CD HD2 sing N N 400 LYS CD HD3 sing N N 401 LYS CE NZ sing N N 402 LYS CE HE2 sing N N 403 LYS CE HE3 sing N N 404 LYS NZ HZ1 sing N N 405 LYS NZ HZ2 sing N N 406 LYS NZ HZ3 sing N N 407 LYS OXT HXT sing N N 408 MET N CA sing N N 409 MET N H sing N N 410 MET N H2 sing N N 411 MET CA C sing N N 412 MET CA CB sing N N 413 MET CA HA sing N N 414 MET C O doub N N 415 MET C OXT sing N N 416 MET CB CG sing N N 417 MET CB HB2 sing N N 418 MET CB HB3 sing N N 419 MET CG SD sing N N 420 MET CG HG2 sing N N 421 MET CG HG3 sing N N 422 MET SD CE sing N N 423 MET CE HE1 sing N N 424 MET CE HE2 sing N N 425 MET CE HE3 sing N N 426 MET OXT HXT sing N N 427 PHE N CA sing N N 428 PHE N H sing N N 429 PHE N H2 sing N N 430 PHE CA C sing N N 431 PHE CA CB sing N N 432 PHE CA HA sing N N 433 PHE C O doub N N 434 PHE C OXT sing N N 435 PHE CB CG sing N N 436 PHE CB HB2 sing N N 437 PHE CB HB3 sing N N 438 PHE CG CD1 doub Y N 439 PHE CG CD2 sing Y N 440 PHE CD1 CE1 sing Y N 441 PHE CD1 HD1 sing N N 442 PHE CD2 CE2 doub Y N 443 PHE CD2 HD2 sing N N 444 PHE CE1 CZ doub Y N 445 PHE CE1 HE1 sing N N 446 PHE CE2 CZ sing Y N 447 PHE CE2 HE2 sing N N 448 PHE CZ HZ sing N N 449 PHE OXT HXT sing N N 450 PRO N CA sing N N 451 PRO N CD sing N N 452 PRO N H sing N N 453 PRO CA C sing N N 454 PRO CA CB sing N N 455 PRO CA HA sing N N 456 PRO C O doub N N 457 PRO C OXT sing N N 458 PRO CB CG sing N N 459 PRO CB HB2 sing N N 460 PRO CB HB3 sing N N 461 PRO CG CD sing N N 462 PRO CG HG2 sing N N 463 PRO CG HG3 sing N N 464 PRO CD HD2 sing N N 465 PRO CD HD3 sing N N 466 PRO OXT HXT sing N N 467 SER N CA sing N N 468 SER N H sing N N 469 SER N H2 sing N N 470 SER CA C sing N N 471 SER CA CB sing N N 472 SER CA HA sing N N 473 SER C O doub N N 474 SER C OXT sing N N 475 SER CB OG sing N N 476 SER CB HB2 sing N N 477 SER CB HB3 sing N N 478 SER OG HG sing N N 479 SER OXT HXT sing N N 480 THR N CA sing N N 481 THR N H sing N N 482 THR N H2 sing N N 483 THR CA C sing N N 484 THR CA CB sing N N 485 THR CA HA sing N N 486 THR C O doub N N 487 THR C OXT sing N N 488 THR CB OG1 sing N N 489 THR CB CG2 sing N N 490 THR CB HB sing N N 491 THR OG1 HG1 sing N N 492 THR CG2 HG21 sing N N 493 THR CG2 HG22 sing N N 494 THR CG2 HG23 sing N N 495 THR OXT HXT sing N N 496 TTP PA O1A doub N N 497 TTP PA O2A sing N N 498 TTP PA O3A sing N N 499 TTP PA "O5'" sing N N 500 TTP O2A HOA2 sing N N 501 TTP O3A PB sing N N 502 TTP PB O1B doub N N 503 TTP PB O2B sing N N 504 TTP PB O3B sing N N 505 TTP O2B HOB2 sing N N 506 TTP O3B PG sing N N 507 TTP PG O1G doub N N 508 TTP PG O2G sing N N 509 TTP PG O3G sing N N 510 TTP O2G HOG2 sing N N 511 TTP O3G HOG3 sing N N 512 TTP "O5'" "C5'" sing N N 513 TTP "C5'" "C4'" sing N N 514 TTP "C5'" "H5'1" sing N N 515 TTP "C5'" "H5'2" sing N N 516 TTP "C4'" "O4'" sing N N 517 TTP "C4'" "C3'" sing N N 518 TTP "C4'" "H4'" sing N N 519 TTP "O4'" "C1'" sing N N 520 TTP "C3'" "O3'" sing N N 521 TTP "C3'" "C2'" sing N N 522 TTP "C3'" "H3'" sing N N 523 TTP "O3'" "HO3'" sing N N 524 TTP "C2'" "C1'" sing N N 525 TTP "C2'" "H2'1" sing N N 526 TTP "C2'" "H2'2" sing N N 527 TTP "C1'" N1 sing N N 528 TTP "C1'" "H1'" sing N N 529 TTP N1 C2 sing N N 530 TTP N1 C6 sing N N 531 TTP C2 O2 doub N N 532 TTP C2 N3 sing N N 533 TTP N3 C4 sing N N 534 TTP N3 HN3 sing N N 535 TTP C4 O4 doub N N 536 TTP C4 C5 sing N N 537 TTP C5 C5M sing N N 538 TTP C5 C6 doub N N 539 TTP C5M HM51 sing N N 540 TTP C5M HM52 sing N N 541 TTP C5M HM53 sing N N 542 TTP C6 H6 sing N N 543 TYR N CA sing N N 544 TYR N H sing N N 545 TYR N H2 sing N N 546 TYR CA C sing N N 547 TYR CA CB sing N N 548 TYR CA HA sing N N 549 TYR C O doub N N 550 TYR C OXT sing N N 551 TYR CB CG sing N N 552 TYR CB HB2 sing N N 553 TYR CB HB3 sing N N 554 TYR CG CD1 doub Y N 555 TYR CG CD2 sing Y N 556 TYR CD1 CE1 sing Y N 557 TYR CD1 HD1 sing N N 558 TYR CD2 CE2 doub Y N 559 TYR CD2 HD2 sing N N 560 TYR CE1 CZ doub Y N 561 TYR CE1 HE1 sing N N 562 TYR CE2 CZ sing Y N 563 TYR CE2 HE2 sing N N 564 TYR CZ OH sing N N 565 TYR OH HH sing N N 566 TYR OXT HXT sing N N 567 VAL N CA sing N N 568 VAL N H sing N N 569 VAL N H2 sing N N 570 VAL CA C sing N N 571 VAL CA CB sing N N 572 VAL CA HA sing N N 573 VAL C O doub N N 574 VAL C OXT sing N N 575 VAL CB CG1 sing N N 576 VAL CB CG2 sing N N 577 VAL CB HB sing N N 578 VAL CG1 HG11 sing N N 579 VAL CG1 HG12 sing N N 580 VAL CG1 HG13 sing N N 581 VAL CG2 HG21 sing N N 582 VAL CG2 HG22 sing N N 583 VAL CG2 HG23 sing N N 584 VAL OXT HXT sing N N 585 # _ndb_struct_conf_na.entry_id 3PW5 _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 3 1_555 C DC 13 1_555 -0.211 -0.339 -0.691 -22.972 9.869 -3.139 1 B_DG374:DC359_C B 374 ? C 359 ? 19 1 1 B DA 4 1_555 C DT 12 1_555 0.342 -0.214 -0.654 -4.440 4.737 -0.445 2 B_DA375:DT358_C B 375 ? C 358 ? 20 1 1 B DA 5 1_555 C DT 11 1_555 -0.067 -0.036 -0.013 -0.605 -2.784 3.535 3 B_DA376:DT357_C B 376 ? C 357 ? 20 1 1 B DT 6 1_555 C DA 10 1_555 -1.149 0.020 -0.329 9.999 -2.614 6.892 4 B_DT377:DA356_C B 377 ? C 356 ? 20 1 1 B DC 7 1_555 C DG 9 1_555 -0.104 -0.069 -0.405 9.097 -10.507 6.562 5 B_DC378:DG355_C B 378 ? C 355 ? 19 1 1 B DC 8 1_555 C DG 8 1_555 -0.535 0.094 0.119 -11.602 -3.494 -2.059 6 B_DC379:DG354_C B 379 ? C 354 ? 19 1 1 B DT 9 1_555 C DA 7 1_555 -0.184 -0.255 -0.014 -3.476 -0.969 -8.306 7 B_DT380:DA353_C B 380 ? C 353 ? 20 1 1 B DT 10 1_555 C DA 6 1_555 0.000 0.036 -0.109 -2.863 -7.736 -5.773 8 B_DT381:DA352_C B 381 ? C 352 ? 20 1 1 B DC 11 1_555 C DG 5 1_555 -0.777 -0.090 -0.392 0.282 -3.858 8.047 9 B_DC382:DG351_C B 382 ? C 351 ? 19 1 1 B DC 12 1_555 C DG 4 1_555 0.848 -0.198 -0.241 -11.096 2.040 7.227 10 B_DC383:DG350_C B 383 ? C 350 ? 19 1 1 B DC 13 1_555 C DG 3 1_555 0.998 -0.385 -0.283 -4.834 -3.734 -4.208 11 B_DC384:DG349_C B 384 ? C 349 ? 19 1 1 B DC 14 1_555 C DG 2 1_555 0.248 0.138 -0.290 -3.266 -2.860 7.541 12 B_DC385:DG348_C B 385 ? C 348 ? 19 1 1 B DC 15 1_555 C DG 1 1_555 0.897 -0.289 -0.203 6.336 -0.204 0.788 13 B_DC386:DG347_C B 386 ? C 347 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 3 1_555 C DC 13 1_555 B DA 4 1_555 C DT 12 1_555 0.079 -0.106 3.010 -0.807 5.582 30.809 -1.165 -0.286 2.943 10.398 1.504 31.308 1 BB_DG374DA375:DT358DC359_CC B 374 ? C 359 ? B 375 ? C 358 ? 1 B DA 4 1_555 C DT 12 1_555 B DA 5 1_555 C DT 11 1_555 -0.506 -0.241 3.252 -4.817 0.805 33.430 -0.546 0.088 3.285 1.390 8.319 33.775 2 BB_DA375DA376:DT357DT358_CC B 375 ? C 358 ? B 376 ? C 357 ? 1 B DA 5 1_555 C DT 11 1_555 B DT 6 1_555 C DA 10 1_555 -0.348 -0.927 3.115 -0.029 3.634 25.538 -3.023 0.772 2.957 8.167 0.066 25.791 3 BB_DA376DT377:DA356DT357_CC B 376 ? C 357 ? B 377 ? C 356 ? 1 B DT 6 1_555 C DA 10 1_555 B DC 7 1_555 C DG 9 1_555 0.581 0.066 3.312 1.316 -4.403 39.083 0.627 -0.705 3.302 -6.553 -1.958 39.342 4 BB_DT377DC378:DG355DA356_CC B 377 ? C 356 ? B 378 ? C 355 ? 1 B DC 7 1_555 C DG 9 1_555 B DC 8 1_555 C DG 8 1_555 -0.310 -1.186 3.953 -3.214 8.421 31.279 -3.838 -0.103 3.536 15.226 5.811 32.520 5 BB_DC378DC379:DG354DG355_CC B 378 ? C 355 ? B 379 ? C 354 ? 1 B DC 8 1_555 C DG 8 1_555 B DT 9 1_555 C DA 7 1_555 -0.202 0.511 3.131 -1.075 -0.800 35.852 0.939 0.180 3.123 -1.298 1.745 35.876 6 BB_DC379DT380:DA353DG354_CC B 379 ? C 354 ? B 380 ? C 353 ? 1 B DT 9 1_555 C DA 7 1_555 B DT 10 1_555 C DA 6 1_555 0.272 -0.875 3.315 2.212 3.653 33.033 -2.137 -0.106 3.213 6.391 -3.871 33.301 7 BB_DT380DT381:DA352DA353_CC B 380 ? C 353 ? B 381 ? C 352 ? 1 B DT 10 1_555 C DA 6 1_555 B DC 11 1_555 C DG 5 1_555 1.315 -0.073 3.209 5.305 3.667 30.886 -0.825 -1.420 3.352 6.792 -9.826 31.536 8 BB_DT381DC382:DG351DA352_CC B 381 ? C 352 ? B 382 ? C 351 ? 1 B DC 11 1_555 C DG 5 1_555 B DC 12 1_555 C DG 4 1_555 -0.507 0.173 3.617 -2.258 13.791 33.914 -1.859 0.458 3.453 22.494 3.684 36.602 9 BB_DC382DC383:DG350DG351_CC B 382 ? C 351 ? B 383 ? C 350 ? 1 B DC 12 1_555 C DG 4 1_555 B DC 13 1_555 C DG 3 1_555 -0.963 -0.846 3.206 2.953 8.890 33.184 -2.725 2.057 2.800 15.194 -5.046 34.445 10 BB_DC383DC384:DG349DG350_CC B 383 ? C 350 ? B 384 ? C 349 ? 1 B DC 13 1_555 C DG 3 1_555 B DC 14 1_555 C DG 2 1_555 1.580 0.063 3.365 2.059 4.903 26.064 -1.215 -2.867 3.431 10.728 -4.507 26.592 11 BB_DC384DC385:DG348DG349_CC B 384 ? C 349 ? B 385 ? C 348 ? 1 B DC 14 1_555 C DG 2 1_555 B DC 15 1_555 C DG 1 1_555 -0.759 0.350 3.318 -2.641 2.309 36.829 0.232 0.831 3.378 3.644 4.168 36.989 12 BB_DC385DC386:DG347DG348_CC B 385 ? C 348 ? B 386 ? C 347 ? # _atom_sites.entry_id 3PW5 _atom_sites.fract_transf_matrix[1][1] 0.010563 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009577 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019044 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_