data_3Q2E # _entry.id 3Q2E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3Q2E pdb_00003q2e 10.2210/pdb3q2e/pdb RCSB RCSB063107 ? ? WWPDB D_1000063107 ? ? # _pdbx_database_status.entry_id 3Q2E _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2010-12-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Filippakopoulos, P.' 1 'Felletar, I.' 2 'Picaud, S.' 3 'Keates, T.' 4 'Krojer, T.' 5 'Muniz, J.' 6 'Gileadi, O.' 7 'Von Delft, F.' 8 'Arrowsmith, C.H.' 9 'Edwards, A.' 10 'Weigelt, J.' 11 'Bountra, C.' 12 'Knapp, S.' 13 'Structural Genomics Consortium (SGC)' 14 # _citation.id primary _citation.title 'Histone recognition and large-scale structural analysis of the human bromodomain family.' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 149 _citation.page_first 214 _citation.page_last 231 _citation.year 2012 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22464331 _citation.pdbx_database_id_DOI 10.1016/j.cell.2012.02.013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Filippakopoulos, P.' 1 ? primary 'Picaud, S.' 2 ? primary 'Mangos, M.' 3 ? primary 'Keates, T.' 4 ? primary 'Lambert, J.P.' 5 ? primary 'Barsyte-Lovejoy, D.' 6 ? primary 'Felletar, I.' 7 ? primary 'Volkmer, R.' 8 ? primary 'Muller, S.' 9 ? primary 'Pawson, T.' 10 ? primary 'Gingras, A.C.' 11 ? primary 'Arrowsmith, C.H.' 12 ? primary 'Knapp, S.' 13 ? # _cell.length_a 51.660 _cell.length_b 51.660 _cell.length_c 151.360 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3Q2E _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.entry_id 3Q2E _symmetry.Int_Tables_number 178 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain and WD repeat-containing protein 1' 14447.411 1 ? ? 'UNP RESIDUES 1310-1430' ? 2 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 3 water nat water 18.015 105 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'WD repeat-containing protein 9' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFS NAKAYTPNKRSKIYSMTLRLSALFEEKMKKISSDFKIGQKFNE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFS NAKAYTPNKRSKIYSMTLRLSALFEEKMKKISSDFKIGQKFNE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ALA n 1 4 THR n 1 5 ASN n 1 6 TYR n 1 7 VAL n 1 8 GLU n 1 9 SER n 1 10 ASN n 1 11 TRP n 1 12 LYS n 1 13 LYS n 1 14 GLN n 1 15 CYS n 1 16 LYS n 1 17 GLU n 1 18 LEU n 1 19 VAL n 1 20 ASN n 1 21 LEU n 1 22 ILE n 1 23 PHE n 1 24 GLN n 1 25 CYS n 1 26 GLU n 1 27 ASP n 1 28 SER n 1 29 GLU n 1 30 PRO n 1 31 PHE n 1 32 ARG n 1 33 GLN n 1 34 PRO n 1 35 VAL n 1 36 ASP n 1 37 LEU n 1 38 VAL n 1 39 GLU n 1 40 TYR n 1 41 PRO n 1 42 ASP n 1 43 TYR n 1 44 ARG n 1 45 ASP n 1 46 ILE n 1 47 ILE n 1 48 ASP n 1 49 THR n 1 50 PRO n 1 51 MET n 1 52 ASP n 1 53 PHE n 1 54 GLY n 1 55 THR n 1 56 VAL n 1 57 ARG n 1 58 GLU n 1 59 THR n 1 60 LEU n 1 61 ASP n 1 62 ALA n 1 63 GLY n 1 64 ASN n 1 65 TYR n 1 66 ASP n 1 67 SER n 1 68 PRO n 1 69 LEU n 1 70 GLU n 1 71 PHE n 1 72 CYS n 1 73 LYS n 1 74 ASP n 1 75 ILE n 1 76 ARG n 1 77 LEU n 1 78 ILE n 1 79 PHE n 1 80 SER n 1 81 ASN n 1 82 ALA n 1 83 LYS n 1 84 ALA n 1 85 TYR n 1 86 THR n 1 87 PRO n 1 88 ASN n 1 89 LYS n 1 90 ARG n 1 91 SER n 1 92 LYS n 1 93 ILE n 1 94 TYR n 1 95 SER n 1 96 MET n 1 97 THR n 1 98 LEU n 1 99 ARG n 1 100 LEU n 1 101 SER n 1 102 ALA n 1 103 LEU n 1 104 PHE n 1 105 GLU n 1 106 GLU n 1 107 LYS n 1 108 MET n 1 109 LYS n 1 110 LYS n 1 111 ILE n 1 112 SER n 1 113 SER n 1 114 ASP n 1 115 PHE n 1 116 LYS n 1 117 ILE n 1 118 GLY n 1 119 GLN n 1 120 LYS n 1 121 PHE n 1 122 ASN n 1 123 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRWD1, C21orf107, WDR9' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRWD1_HUMAN _struct_ref.pdbx_db_accession Q9NSI6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATNYVESNWKKQCKELVNLIFQCEDSEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNA KAYTPNKRSKIYSMTLRLSALFEEKMKKISSDFKIGQKFNE ; _struct_ref.pdbx_align_begin 1310 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3Q2E _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 123 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NSI6 _struct_ref_seq.db_align_beg 1310 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1430 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1310 _struct_ref_seq.pdbx_auth_seq_align_end 1430 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3Q2E SER A 1 ? UNP Q9NSI6 ? ? 'expression tag' 1308 1 1 3Q2E MET A 2 ? UNP Q9NSI6 ? ? 'expression tag' 1309 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3Q2E _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.280 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 39.04 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.2M (NH4)COOCH3, 0.1M BisTris, 25% PEG 3350 , pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-11-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9700 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9700 _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I02 # _reflns.entry_id 3Q2E _reflns.d_resolution_high 1.740 _reflns.d_resolution_low 28.892 _reflns.number_all 13033 _reflns.number_obs 12968 _reflns.pdbx_netI_over_sigmaI 12.900 _reflns.pdbx_Rsym_value 0.088 _reflns.pdbx_redundancy 6.700 _reflns.percent_possible_obs 99.500 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.B_iso_Wilson_estimate 25.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.740 1.830 ? 10973 ? ? 0.870 0.9 0.870 ? 6.100 ? 2.000 ? 1797 ? ? 0.951 ? 98.000 0.951 0.375 1 1 1.830 1.950 ? 12290 ? ? 0.541 1.4 0.541 ? 7.100 ? 3.800 ? 1723 ? ? 0.583 ? 99.500 0.583 0.216 2 1 1.950 2.080 ? 11712 ? ? 0.339 2.2 0.339 ? 7.100 ? 5.800 ? 1651 ? ? 0.366 ? 99.600 0.366 0.136 3 1 2.080 2.250 ? 10913 ? ? 0.185 4.1 0.185 ? 7.000 ? 9.800 ? 1550 ? ? 0.200 ? 99.800 0.200 0.075 4 1 2.250 2.460 ? 9942 ? ? 0.129 5.7 0.129 ? 7.000 ? 13.200 ? 1424 ? ? 0.139 ? 99.800 0.139 0.052 5 1 2.460 2.750 ? 8977 ? ? 0.081 8.9 0.081 ? 6.900 ? 17.500 ? 1306 ? ? 0.087 ? 100.000 0.087 0.033 6 1 2.750 3.180 ? 7893 ? ? 0.061 10.6 0.061 ? 6.700 ? 22.000 ? 1171 ? ? 0.066 ? 100.000 0.066 0.025 7 1 3.180 3.890 ? 6658 ? ? 0.067 7.9 0.067 ? 6.500 ? 26.400 ? 1027 ? ? 0.073 ? 100.000 0.073 0.029 8 1 3.890 5.500 ? 4941 ? ? 0.050 11.2 0.050 ? 6.000 ? 28.900 ? 824 ? ? 0.054 ? 100.000 0.054 0.022 9 1 5.500 28.892 ? 2782 ? ? 0.039 14.1 0.039 ? 5.600 ? 29.000 ? 495 ? ? 0.043 ? 97.900 0.043 0.018 10 1 # _refine.entry_id 3Q2E _refine.ls_d_res_high 1.7400 _refine.ls_d_res_low 28.8900 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.2300 _refine.ls_number_reflns_obs 12942 _refine.ls_number_reflns_all 13042 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: WITH TLS ADDED' _refine.ls_R_factor_all 0.1867 _refine.ls_R_factor_obs 0.1867 _refine.ls_R_factor_R_work 0.1852 _refine.ls_wR_factor_R_work 0.1822 _refine.ls_R_factor_R_free 0.2191 _refine.ls_wR_factor_R_free 0.2165 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_number_reflns_R_free 634 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 29.4449 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.2000 _refine.aniso_B[2][2] 0.2000 _refine.aniso_B[3][3] -0.3000 _refine.aniso_B[1][2] 0.1000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9600 _refine.correlation_coeff_Fo_to_Fc_free 0.9540 _refine.overall_SU_R_Cruickshank_DPI 0.1125 _refine.overall_SU_R_free 0.1098 _refine.pdbx_overall_ESU_R_Free 0.1100 _refine.overall_SU_ML 0.0710 _refine.overall_SU_B 4.2470 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8744 _refine.B_iso_max 89.960 _refine.B_iso_min 11.640 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 862 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 105 _refine_hist.number_atoms_total 971 _refine_hist.d_res_high 1.7400 _refine_hist.d_res_low 28.8900 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 898 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 620 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1217 1.450 1.969 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 1510 0.934 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 110 4.915 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 46 35.635 24.565 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 156 13.363 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 12.969 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 131 0.092 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1003 0.007 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 186 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 547 2.988 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 211 0.909 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 887 4.675 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 351 7.593 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 328 10.535 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.7400 _refine_ls_shell.d_res_low 1.7850 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.2200 _refine_ls_shell.number_reflns_R_work 845 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3480 _refine_ls_shell.R_factor_R_free 0.4530 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 47 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 892 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3Q2E _struct.title 'Crystal structure of the second bromodomain of human bromodomain and WD repeat-containing protein 1 isoform A (WDR9)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3Q2E _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;Structural Genomics Consortium, SGC, Bromodomain, cell cycle progression, signal transduction, apoptosis, gene regulation, Down syndrome region-2 on chromosome 21, SIGNALING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 10 ? GLN A 24 ? ASN A 1317 GLN A 1331 1 ? 15 HELX_P HELX_P2 2 CYS A 25 ? ARG A 32 ? CYS A 1332 ARG A 1339 5 ? 8 HELX_P HELX_P3 3 ASP A 42 ? ILE A 47 ? ASP A 1349 ILE A 1354 1 ? 6 HELX_P HELX_P4 4 ASP A 52 ? ALA A 62 ? ASP A 1359 ALA A 1369 1 ? 11 HELX_P HELX_P5 5 SER A 67 ? THR A 86 ? SER A 1374 THR A 1393 1 ? 20 HELX_P HELX_P6 6 SER A 91 ? LYS A 116 ? SER A 1398 LYS A 1423 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ACT _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE ACT A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HOH C . ? HOH A 4 . ? 1_555 ? 2 AC1 2 HOH C . ? HOH A 84 . ? 1_555 ? # _atom_sites.entry_id 3Q2E _atom_sites.fract_transf_matrix[1][1] 0.019357 _atom_sites.fract_transf_matrix[1][2] 0.011176 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022352 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006607 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1308 ? ? ? A . n A 1 2 MET 2 1309 ? ? ? A . n A 1 3 ALA 3 1310 ? ? ? A . n A 1 4 THR 4 1311 ? ? ? A . n A 1 5 ASN 5 1312 ? ? ? A . n A 1 6 TYR 6 1313 ? ? ? A . n A 1 7 VAL 7 1314 ? ? ? A . n A 1 8 GLU 8 1315 ? ? ? A . n A 1 9 SER 9 1316 ? ? ? A . n A 1 10 ASN 10 1317 1317 ASN ASN A . n A 1 11 TRP 11 1318 1318 TRP TRP A . n A 1 12 LYS 12 1319 1319 LYS LYS A . n A 1 13 LYS 13 1320 1320 LYS LYS A . n A 1 14 GLN 14 1321 1321 GLN GLN A . n A 1 15 CYS 15 1322 1322 CYS CYS A . n A 1 16 LYS 16 1323 1323 LYS LYS A . n A 1 17 GLU 17 1324 1324 GLU GLU A . n A 1 18 LEU 18 1325 1325 LEU LEU A . n A 1 19 VAL 19 1326 1326 VAL VAL A . n A 1 20 ASN 20 1327 1327 ASN ASN A . n A 1 21 LEU 21 1328 1328 LEU LEU A . n A 1 22 ILE 22 1329 1329 ILE ILE A . n A 1 23 PHE 23 1330 1330 PHE PHE A . n A 1 24 GLN 24 1331 1331 GLN GLN A . n A 1 25 CYS 25 1332 1332 CYS CYS A . n A 1 26 GLU 26 1333 1333 GLU GLU A . n A 1 27 ASP 27 1334 1334 ASP ASP A . n A 1 28 SER 28 1335 1335 SER SER A . n A 1 29 GLU 29 1336 1336 GLU GLU A . n A 1 30 PRO 30 1337 1337 PRO PRO A . n A 1 31 PHE 31 1338 1338 PHE PHE A . n A 1 32 ARG 32 1339 1339 ARG ARG A . n A 1 33 GLN 33 1340 1340 GLN GLN A . n A 1 34 PRO 34 1341 1341 PRO PRO A . n A 1 35 VAL 35 1342 1342 VAL VAL A . n A 1 36 ASP 36 1343 1343 ASP ASP A . n A 1 37 LEU 37 1344 1344 LEU LEU A . n A 1 38 VAL 38 1345 1345 VAL VAL A . n A 1 39 GLU 39 1346 1346 GLU GLU A . n A 1 40 TYR 40 1347 1347 TYR TYR A . n A 1 41 PRO 41 1348 1348 PRO PRO A . n A 1 42 ASP 42 1349 1349 ASP ASP A . n A 1 43 TYR 43 1350 1350 TYR TYR A . n A 1 44 ARG 44 1351 1351 ARG ARG A . n A 1 45 ASP 45 1352 1352 ASP ASP A . n A 1 46 ILE 46 1353 1353 ILE ILE A . n A 1 47 ILE 47 1354 1354 ILE ILE A . n A 1 48 ASP 48 1355 1355 ASP ASP A . n A 1 49 THR 49 1356 1356 THR THR A . n A 1 50 PRO 50 1357 1357 PRO PRO A . n A 1 51 MET 51 1358 1358 MET MET A . n A 1 52 ASP 52 1359 1359 ASP ASP A . n A 1 53 PHE 53 1360 1360 PHE PHE A . n A 1 54 GLY 54 1361 1361 GLY GLY A . n A 1 55 THR 55 1362 1362 THR THR A . n A 1 56 VAL 56 1363 1363 VAL VAL A . n A 1 57 ARG 57 1364 1364 ARG ARG A . n A 1 58 GLU 58 1365 1365 GLU GLU A . n A 1 59 THR 59 1366 1366 THR THR A . n A 1 60 LEU 60 1367 1367 LEU LEU A . n A 1 61 ASP 61 1368 1368 ASP ASP A . n A 1 62 ALA 62 1369 1369 ALA ALA A . n A 1 63 GLY 63 1370 1370 GLY GLY A . n A 1 64 ASN 64 1371 1371 ASN ASN A . n A 1 65 TYR 65 1372 1372 TYR TYR A . n A 1 66 ASP 66 1373 1373 ASP ASP A . n A 1 67 SER 67 1374 1374 SER SER A . n A 1 68 PRO 68 1375 1375 PRO PRO A . n A 1 69 LEU 69 1376 1376 LEU LEU A . n A 1 70 GLU 70 1377 1377 GLU GLU A . n A 1 71 PHE 71 1378 1378 PHE PHE A . n A 1 72 CYS 72 1379 1379 CYS CYS A . n A 1 73 LYS 73 1380 1380 LYS LYS A . n A 1 74 ASP 74 1381 1381 ASP ASP A . n A 1 75 ILE 75 1382 1382 ILE ILE A . n A 1 76 ARG 76 1383 1383 ARG ARG A . n A 1 77 LEU 77 1384 1384 LEU LEU A . n A 1 78 ILE 78 1385 1385 ILE ILE A . n A 1 79 PHE 79 1386 1386 PHE PHE A . n A 1 80 SER 80 1387 1387 SER SER A . n A 1 81 ASN 81 1388 1388 ASN ASN A . n A 1 82 ALA 82 1389 1389 ALA ALA A . n A 1 83 LYS 83 1390 1390 LYS LYS A . n A 1 84 ALA 84 1391 1391 ALA ALA A . n A 1 85 TYR 85 1392 1392 TYR TYR A . n A 1 86 THR 86 1393 1393 THR THR A . n A 1 87 PRO 87 1394 1394 PRO PRO A . n A 1 88 ASN 88 1395 1395 ASN ASN A . n A 1 89 LYS 89 1396 1396 LYS LYS A . n A 1 90 ARG 90 1397 1397 ARG ARG A . n A 1 91 SER 91 1398 1398 SER SER A . n A 1 92 LYS 92 1399 1399 LYS LYS A . n A 1 93 ILE 93 1400 1400 ILE ILE A . n A 1 94 TYR 94 1401 1401 TYR TYR A . n A 1 95 SER 95 1402 1402 SER SER A . n A 1 96 MET 96 1403 1403 MET MET A . n A 1 97 THR 97 1404 1404 THR THR A . n A 1 98 LEU 98 1405 1405 LEU LEU A . n A 1 99 ARG 99 1406 1406 ARG ARG A . n A 1 100 LEU 100 1407 1407 LEU LEU A . n A 1 101 SER 101 1408 1408 SER SER A . n A 1 102 ALA 102 1409 1409 ALA ALA A . n A 1 103 LEU 103 1410 1410 LEU LEU A . n A 1 104 PHE 104 1411 1411 PHE PHE A . n A 1 105 GLU 105 1412 1412 GLU GLU A . n A 1 106 GLU 106 1413 1413 GLU GLU A . n A 1 107 LYS 107 1414 1414 LYS LYS A . n A 1 108 MET 108 1415 1415 MET MET A . n A 1 109 LYS 109 1416 1416 LYS LYS A . n A 1 110 LYS 110 1417 1417 LYS LYS A . n A 1 111 ILE 111 1418 1418 ILE ILE A . n A 1 112 SER 112 1419 1419 SER SER A . n A 1 113 SER 113 1420 1420 SER SER A . n A 1 114 ASP 114 1421 1421 ASP ASP A . n A 1 115 PHE 115 1422 1422 PHE PHE A . n A 1 116 LYS 116 1423 1423 LYS LYS A . n A 1 117 ILE 117 1424 ? ? ? A . n A 1 118 GLY 118 1425 ? ? ? A . n A 1 119 GLN 119 1426 ? ? ? A . n A 1 120 LYS 120 1427 ? ? ? A . n A 1 121 PHE 121 1428 ? ? ? A . n A 1 122 ASN 122 1429 ? ? ? A . n A 1 123 GLU 123 1430 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT 1 1 1 ACT ACT A . C 3 HOH 1 2 2 HOH HOH A . C 3 HOH 2 3 3 HOH HOH A . C 3 HOH 3 4 4 HOH HOH A . C 3 HOH 4 5 5 HOH HOH A . C 3 HOH 5 6 6 HOH HOH A . C 3 HOH 6 7 7 HOH HOH A . C 3 HOH 7 8 8 HOH HOH A . C 3 HOH 8 9 9 HOH HOH A . C 3 HOH 9 10 10 HOH HOH A . C 3 HOH 10 11 11 HOH HOH A . C 3 HOH 11 12 12 HOH HOH A . C 3 HOH 12 13 13 HOH HOH A . C 3 HOH 13 14 14 HOH HOH A . C 3 HOH 14 15 15 HOH HOH A . C 3 HOH 15 16 16 HOH HOH A . C 3 HOH 16 17 17 HOH HOH A . C 3 HOH 17 18 18 HOH HOH A . C 3 HOH 18 19 19 HOH HOH A . C 3 HOH 19 20 20 HOH HOH A . C 3 HOH 20 21 21 HOH HOH A . C 3 HOH 21 22 22 HOH HOH A . C 3 HOH 22 23 23 HOH HOH A . C 3 HOH 23 24 24 HOH HOH A . C 3 HOH 24 25 25 HOH HOH A . C 3 HOH 25 26 26 HOH HOH A . C 3 HOH 26 27 27 HOH HOH A . C 3 HOH 27 28 28 HOH HOH A . C 3 HOH 28 29 29 HOH HOH A . C 3 HOH 29 30 30 HOH HOH A . C 3 HOH 30 31 31 HOH HOH A . C 3 HOH 31 32 32 HOH HOH A . C 3 HOH 32 33 33 HOH HOH A . C 3 HOH 33 34 34 HOH HOH A . C 3 HOH 34 35 35 HOH HOH A . C 3 HOH 35 36 36 HOH HOH A . C 3 HOH 36 37 37 HOH HOH A . C 3 HOH 37 38 38 HOH HOH A . C 3 HOH 38 39 39 HOH HOH A . C 3 HOH 39 40 40 HOH HOH A . C 3 HOH 40 41 41 HOH HOH A . C 3 HOH 41 42 42 HOH HOH A . C 3 HOH 42 43 43 HOH HOH A . C 3 HOH 43 44 44 HOH HOH A . C 3 HOH 44 45 45 HOH HOH A . C 3 HOH 45 46 46 HOH HOH A . C 3 HOH 46 47 47 HOH HOH A . C 3 HOH 47 48 48 HOH HOH A . C 3 HOH 48 49 49 HOH HOH A . C 3 HOH 49 50 50 HOH HOH A . C 3 HOH 50 51 51 HOH HOH A . C 3 HOH 51 52 52 HOH HOH A . C 3 HOH 52 53 53 HOH HOH A . C 3 HOH 53 54 54 HOH HOH A . C 3 HOH 54 55 55 HOH HOH A . C 3 HOH 55 56 56 HOH HOH A . C 3 HOH 56 57 57 HOH HOH A . C 3 HOH 57 58 58 HOH HOH A . C 3 HOH 58 59 59 HOH HOH A . C 3 HOH 59 60 60 HOH HOH A . C 3 HOH 60 61 61 HOH HOH A . C 3 HOH 61 62 62 HOH HOH A . C 3 HOH 62 63 63 HOH HOH A . C 3 HOH 63 64 64 HOH HOH A . C 3 HOH 64 65 65 HOH HOH A . C 3 HOH 65 66 66 HOH HOH A . C 3 HOH 66 67 67 HOH HOH A . C 3 HOH 67 68 68 HOH HOH A . C 3 HOH 68 69 69 HOH HOH A . C 3 HOH 69 70 70 HOH HOH A . C 3 HOH 70 71 71 HOH HOH A . C 3 HOH 71 72 72 HOH HOH A . C 3 HOH 72 73 73 HOH HOH A . C 3 HOH 73 74 74 HOH HOH A . C 3 HOH 74 75 75 HOH HOH A . C 3 HOH 75 76 76 HOH HOH A . C 3 HOH 76 77 77 HOH HOH A . C 3 HOH 77 78 78 HOH HOH A . C 3 HOH 78 79 79 HOH HOH A . C 3 HOH 79 80 80 HOH HOH A . C 3 HOH 80 81 81 HOH HOH A . C 3 HOH 81 82 82 HOH HOH A . C 3 HOH 82 83 83 HOH HOH A . C 3 HOH 83 84 84 HOH HOH A . C 3 HOH 84 85 85 HOH HOH A . C 3 HOH 85 86 86 HOH HOH A . C 3 HOH 86 87 87 HOH HOH A . C 3 HOH 87 88 88 HOH HOH A . C 3 HOH 88 89 89 HOH HOH A . C 3 HOH 89 90 90 HOH HOH A . C 3 HOH 90 91 91 HOH HOH A . C 3 HOH 91 92 92 HOH HOH A . C 3 HOH 92 93 93 HOH HOH A . C 3 HOH 93 94 94 HOH HOH A . C 3 HOH 94 97 97 HOH HOH A . C 3 HOH 95 98 98 HOH HOH A . C 3 HOH 96 99 99 HOH HOH A . C 3 HOH 97 100 100 HOH HOH A . C 3 HOH 98 101 101 HOH HOH A . C 3 HOH 99 102 102 HOH HOH A . C 3 HOH 100 103 103 HOH HOH A . C 3 HOH 101 104 104 HOH HOH A . C 3 HOH 102 105 105 HOH HOH A . C 3 HOH 103 106 106 HOH HOH A . C 3 HOH 104 107 107 HOH HOH A . C 3 HOH 105 1431 1 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 90 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-02-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-04-11 4 'Structure model' 1 3 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.740 _diffrn_reflns.pdbx_d_res_low 28.892 _diffrn_reflns.pdbx_number_obs 12968 _diffrn_reflns.pdbx_Rmerge_I_obs ? _diffrn_reflns.pdbx_Rsym_value 0.088 _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI 5.60 _diffrn_reflns.pdbx_redundancy 6.70 _diffrn_reflns.pdbx_percent_possible_obs 99.50 _diffrn_reflns.number 87081 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.50 28.89 ? ? 0.039 0.039 ? 5.60 97.90 1 3.89 5.50 ? ? 0.050 0.050 ? 6.00 100.00 1 3.18 3.89 ? ? 0.067 0.067 ? 6.50 100.00 1 2.75 3.18 ? ? 0.061 0.061 ? 6.70 100.00 1 2.46 2.75 ? ? 0.081 0.081 ? 6.90 100.00 1 2.25 2.46 ? ? 0.129 0.129 ? 7.00 99.80 1 2.08 2.25 ? ? 0.185 0.185 ? 7.00 99.80 1 1.95 2.08 ? ? 0.339 0.339 ? 7.10 99.60 1 1.83 1.95 ? ? 0.541 0.541 ? 7.10 99.50 1 1.74 1.83 ? ? 0.870 0.870 ? 6.10 98.00 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -5.5093 31.4331 0.7041 0.0403 0.2543 0.2233 0.0243 0.0764 0.0578 -4.5409 34.0038 28.2297 4.7643 -5.6682 -1.0033 0.0429 -0.2983 0.2554 -0.3715 -0.2751 -1.3835 -1.0918 -0.3310 1.9600 'X-RAY DIFFRACTION' 2 ? refined -26.2178 28.6446 3.9642 0.1040 0.0503 0.0545 0.0118 -0.0049 -0.0090 1.8641 0.8529 0.7037 -1.2151 0.2947 -0.2385 0.0091 -0.0475 0.0384 0.0805 -0.0695 -0.0060 -0.0263 0.0107 -0.0311 'X-RAY DIFFRACTION' 3 ? refined -19.4699 35.2269 3.3260 0.1352 0.0504 0.0744 0.0172 0.0133 0.0216 3.6206 0.6151 1.2723 -0.6946 -1.6274 -0.2312 0.0616 -0.1019 0.0404 0.0646 0.1289 -0.1546 -0.0814 -0.0553 -0.0538 'X-RAY DIFFRACTION' 4 ? refined -17.0175 32.6818 14.0421 0.1500 0.0491 0.0689 0.0061 -0.0409 -0.0342 3.5764 0.1569 1.6515 -0.5475 -0.5447 0.0285 -0.1027 0.1027 0.0000 -0.0371 0.1978 -0.0884 0.1708 -0.2236 0.0924 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1317 A 1323 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 1324 A 1362 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 1363 A 1395 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 1396 A 1423 ? . . . . ? # _pdbx_phasing_MR.entry_id 3Q2E _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 49.930 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 25.460 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 25.460 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.16 2010/01/06 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 DNA . ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD2 A ASP 1352 ? ? O A HOH 78 ? ? 1.90 2 1 OD1 A ASP 1352 ? ? O A HOH 93 ? ? 1.97 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 1320 ? CD ? A LYS 13 CD 2 1 Y 1 A LYS 1320 ? CE ? A LYS 13 CE 3 1 Y 1 A LYS 1320 ? NZ ? A LYS 13 NZ 4 1 Y 1 A GLU 1324 ? CG ? A GLU 17 CG 5 1 Y 1 A GLU 1324 ? CD ? A GLU 17 CD 6 1 Y 1 A GLU 1324 ? OE1 ? A GLU 17 OE1 7 1 Y 1 A GLU 1324 ? OE2 ? A GLU 17 OE2 8 1 Y 1 A LEU 1376 ? CG ? A LEU 69 CG 9 1 Y 1 A LEU 1376 ? CD1 ? A LEU 69 CD1 10 1 Y 1 A LEU 1376 ? CD2 ? A LEU 69 CD2 11 1 Y 1 A LYS 1380 ? NZ ? A LYS 73 NZ 12 1 Y 1 A LYS 1399 ? CD ? A LYS 92 CD 13 1 Y 1 A LYS 1399 ? CE ? A LYS 92 CE 14 1 Y 1 A LYS 1399 ? NZ ? A LYS 92 NZ 15 1 Y 1 A LYS 1416 ? CE ? A LYS 109 CE 16 1 Y 1 A LYS 1416 ? NZ ? A LYS 109 NZ 17 1 Y 1 A LYS 1417 ? CG ? A LYS 110 CG 18 1 Y 1 A LYS 1417 ? CD ? A LYS 110 CD 19 1 Y 1 A LYS 1417 ? CE ? A LYS 110 CE 20 1 Y 1 A LYS 1417 ? NZ ? A LYS 110 NZ 21 1 Y 1 A LYS 1423 ? CG ? A LYS 116 CG 22 1 Y 1 A LYS 1423 ? CD ? A LYS 116 CD 23 1 Y 1 A LYS 1423 ? CE ? A LYS 116 CE 24 1 Y 1 A LYS 1423 ? NZ ? A LYS 116 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1308 ? A SER 1 2 1 Y 1 A MET 1309 ? A MET 2 3 1 Y 1 A ALA 1310 ? A ALA 3 4 1 Y 1 A THR 1311 ? A THR 4 5 1 Y 1 A ASN 1312 ? A ASN 5 6 1 Y 1 A TYR 1313 ? A TYR 6 7 1 Y 1 A VAL 1314 ? A VAL 7 8 1 Y 1 A GLU 1315 ? A GLU 8 9 1 Y 1 A SER 1316 ? A SER 9 10 1 Y 1 A ILE 1424 ? A ILE 117 11 1 Y 1 A GLY 1425 ? A GLY 118 12 1 Y 1 A GLN 1426 ? A GLN 119 13 1 Y 1 A LYS 1427 ? A LYS 120 14 1 Y 1 A PHE 1428 ? A PHE 121 15 1 Y 1 A ASN 1429 ? A ASN 122 16 1 Y 1 A GLU 1430 ? A GLU 123 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HOH O H1 sing N N 135 HOH O H2 sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 3MB3 '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 2 ? 'experimental model' PDB 2OSS '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 3 ? 'experimental model' PDB 2OUO '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 4 ? 'experimental model' PDB 2GRC '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 5 ? 'experimental model' PDB 2OO1 '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 6 ? 'experimental model' PDB 3DAI '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 7 ? 'experimental model' PDB 3D7C '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' 8 ? 'experimental model' PDB 3DWY '3MB3, 2OSS, 2OUO, 2GRC, 2OO1, 3DAI, 3D7C, 3DWY' #