data_3Q64 # _entry.id 3Q64 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3Q64 RCSB RCSB063241 WWPDB D_1000063241 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id MlR405 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3Q64 _pdbx_database_status.recvd_initial_deposition_date 2010-12-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Forouhar, F.' 1 'Lew, S.' 2 'Seetharaman, J.' 3 'Wang, D.' 4 'Ciccosanti, C.' 5 'Sahdev, S.' 6 'Nair, R.' 7 'Rost, B.' 8 'Acton, T.B.' 9 'Xiao, R.' 10 'Everett, J.K.' 11 'Montelione, G.T.' 12 'Hunt, J.F.' 13 'Tong, L.' 14 'Northeast Structural Genomics Consortium (NESG)' 15 # _citation.id primary _citation.title 'X-ray crystal structure of protein mll3774 from Mesorhizobium loti, Northeast Structural Genomics Consortium Target MlR405.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Forouhar, F.' 1 ? primary 'Lew, S.' 2 ? primary 'Seetharaman, J.' 3 ? primary 'Wang, D.' 4 ? primary 'Ciccosanti, C.' 5 ? primary 'Sahdev, S.' 6 ? primary 'Nair, R.' 7 ? primary 'Rost, B.' 8 ? primary 'Acton, T.B.' 9 ? primary 'Xiao, R.' 10 ? primary 'Everett, J.K.' 11 ? primary 'Montelione, G.T.' 12 ? primary 'Hunt, J.F.' 13 ? primary 'Tong, L.' 14 ? # _cell.entry_id 3Q64 _cell.length_a 86.378 _cell.length_b 86.378 _cell.length_c 57.690 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3Q64 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mll3774 protein' 18418.016 1 ? ? ? ? 2 water nat water 18.015 267 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)TERSVVHSTFIIERLYPAPPSKVFFALGNADAKRRWFTDPDNP(MSE)PGRFE(MSE)DFRVGGKEVNAGGPKDG PIHVYTATYQDIVPDQRIVYSYD(MSE)LFGETRISVSLATIQLFAEGEGTRLVLTEQGAFLDGHDTPSTREHGTGVLLD LLDAFLDKTTLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MTERSVVHSTFIIERLYPAPPSKVFFALGNADAKRRWFTDPDNPMPGRFEMDFRVGGKEVNAGGPKDGPIHVYTATYQDI VPDQRIVYSYDMLFGETRISVSLATIQLFAEGEGTRLVLTEQGAFLDGHDTPSTREHGTGVLLDLLDAFLDKTTLEHHHH HH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MlR405 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 THR n 1 3 GLU n 1 4 ARG n 1 5 SER n 1 6 VAL n 1 7 VAL n 1 8 HIS n 1 9 SER n 1 10 THR n 1 11 PHE n 1 12 ILE n 1 13 ILE n 1 14 GLU n 1 15 ARG n 1 16 LEU n 1 17 TYR n 1 18 PRO n 1 19 ALA n 1 20 PRO n 1 21 PRO n 1 22 SER n 1 23 LYS n 1 24 VAL n 1 25 PHE n 1 26 PHE n 1 27 ALA n 1 28 LEU n 1 29 GLY n 1 30 ASN n 1 31 ALA n 1 32 ASP n 1 33 ALA n 1 34 LYS n 1 35 ARG n 1 36 ARG n 1 37 TRP n 1 38 PHE n 1 39 THR n 1 40 ASP n 1 41 PRO n 1 42 ASP n 1 43 ASN n 1 44 PRO n 1 45 MSE n 1 46 PRO n 1 47 GLY n 1 48 ARG n 1 49 PHE n 1 50 GLU n 1 51 MSE n 1 52 ASP n 1 53 PHE n 1 54 ARG n 1 55 VAL n 1 56 GLY n 1 57 GLY n 1 58 LYS n 1 59 GLU n 1 60 VAL n 1 61 ASN n 1 62 ALA n 1 63 GLY n 1 64 GLY n 1 65 PRO n 1 66 LYS n 1 67 ASP n 1 68 GLY n 1 69 PRO n 1 70 ILE n 1 71 HIS n 1 72 VAL n 1 73 TYR n 1 74 THR n 1 75 ALA n 1 76 THR n 1 77 TYR n 1 78 GLN n 1 79 ASP n 1 80 ILE n 1 81 VAL n 1 82 PRO n 1 83 ASP n 1 84 GLN n 1 85 ARG n 1 86 ILE n 1 87 VAL n 1 88 TYR n 1 89 SER n 1 90 TYR n 1 91 ASP n 1 92 MSE n 1 93 LEU n 1 94 PHE n 1 95 GLY n 1 96 GLU n 1 97 THR n 1 98 ARG n 1 99 ILE n 1 100 SER n 1 101 VAL n 1 102 SER n 1 103 LEU n 1 104 ALA n 1 105 THR n 1 106 ILE n 1 107 GLN n 1 108 LEU n 1 109 PHE n 1 110 ALA n 1 111 GLU n 1 112 GLY n 1 113 GLU n 1 114 GLY n 1 115 THR n 1 116 ARG n 1 117 LEU n 1 118 VAL n 1 119 LEU n 1 120 THR n 1 121 GLU n 1 122 GLN n 1 123 GLY n 1 124 ALA n 1 125 PHE n 1 126 LEU n 1 127 ASP n 1 128 GLY n 1 129 HIS n 1 130 ASP n 1 131 THR n 1 132 PRO n 1 133 SER n 1 134 THR n 1 135 ARG n 1 136 GLU n 1 137 HIS n 1 138 GLY n 1 139 THR n 1 140 GLY n 1 141 VAL n 1 142 LEU n 1 143 LEU n 1 144 ASP n 1 145 LEU n 1 146 LEU n 1 147 ASP n 1 148 ALA n 1 149 PHE n 1 150 LEU n 1 151 ASP n 1 152 LYS n 1 153 THR n 1 154 THR n 1 155 LEU n 1 156 GLU n 1 157 HIS n 1 158 HIS n 1 159 HIS n 1 160 HIS n 1 161 HIS n 1 162 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene mll3774 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MAFF303099 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mesorhizobium loti' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 381 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q98FH6_RHILO _struct_ref.pdbx_db_accession Q98FH6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTERSVVHSTFIIERLYPAPPSKVFFALGNADAKRRWFTDPDNPMPGRFEMDFRVGGKEVNAGGPKDGPIHVYTATYQDI VPDQRIVYSYDMLFGETRISVSLATIQLFAEGEGTRLVLTEQGAFLDGHDTPSTREHGTGVLLDLLDAFLDKTT ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3Q64 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 154 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q98FH6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 154 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3Q64 LEU A 155 ? UNP Q98FH6 ? ? 'EXPRESSION TAG' 155 1 1 3Q64 GLU A 156 ? UNP Q98FH6 ? ? 'EXPRESSION TAG' 156 2 1 3Q64 HIS A 157 ? UNP Q98FH6 ? ? 'EXPRESSION TAG' 157 3 1 3Q64 HIS A 158 ? UNP Q98FH6 ? ? 'EXPRESSION TAG' 158 4 1 3Q64 HIS A 159 ? UNP Q98FH6 ? ? 'EXPRESSION TAG' 159 5 1 3Q64 HIS A 160 ? UNP Q98FH6 ? ? 'EXPRESSION TAG' 160 6 1 3Q64 HIS A 161 ? UNP Q98FH6 ? ? 'EXPRESSION TAG' 161 7 1 3Q64 HIS A 162 ? UNP Q98FH6 ? ? 'EXPRESSION TAG' 162 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3Q64 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.37 _exptl_crystal.density_percent_sol 63.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details ;Protein solution: 10 mM Tris (pH 7.5), 100 mM sodium chloride, and 5 mM DTT. Reservoir solution: 100 mM MES (pH 6), PEG 4000 20% (w/v),100 mM Magnesium sulfate heptahydrate, Microbatch, under oil, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2010-10-04 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97897 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97897 # _reflns.entry_id 3Q64 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 1.5 _reflns.number_obs 76634 _reflns.number_all 77329 _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.047 _reflns.pdbx_Rsym_value 0.040 _reflns.pdbx_netI_over_sigmaI 50.2 _reflns.B_iso_Wilson_estimate 17.7 _reflns.pdbx_redundancy 11.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.423 _reflns_shell.pdbx_Rsym_value 0.338 _reflns_shell.meanI_over_sigI_obs 5.60 _reflns_shell.pdbx_redundancy 11.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 7716 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3Q64 _refine.ls_number_reflns_obs 35963 _refine.ls_number_reflns_all 35963 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.17864 _refine.ls_R_factor_all 0.179 _refine.ls_R_factor_R_work 0.17684 _refine.ls_R_factor_R_free 0.19486 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 3993 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 21.270 _refine.aniso_B[1][1] 0.80 _refine.aniso_B[2][2] 0.80 _refine.aniso_B[3][3] -1.20 _refine.aniso_B[1][2] 0.40 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.062 _refine.overall_SU_ML 0.034 _refine.overall_SU_B 1.958 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3Q64 _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs 0.13 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.19 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1221 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 267 _refine_hist.number_atoms_total 1488 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 1252 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.184 1.960 ? 1701 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.630 5.000 ? 154 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.987 23.279 ? 61 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.382 15.000 ? 197 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.913 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.077 0.200 ? 186 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 976 'X-RAY DIFFRACTION' ? r_nbd_refined 0.204 0.200 ? 555 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.312 0.200 ? 850 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.127 0.200 ? 206 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.181 0.200 ? 36 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.150 0.200 ? 23 'X-RAY DIFFRACTION' ? r_mcbond_it 1.014 1.500 ? 785 'X-RAY DIFFRACTION' ? r_mcangle_it 1.397 2.000 ? 1246 'X-RAY DIFFRACTION' ? r_scbond_it 2.273 3.000 ? 514 'X-RAY DIFFRACTION' ? r_scangle_it 3.210 4.500 ? 455 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.380 3.000 ? 1299 'X-RAY DIFFRACTION' ? r_sphericity_free 3.430 3.000 ? 267 'X-RAY DIFFRACTION' ? r_sphericity_bonded 2.046 3.000 ? 1221 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_R_work 2609 _refine_ls_shell.R_factor_R_work 0.190 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.235 _refine_ls_shell.R_factor_R_free_error 0.011 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 296 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 5232 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3Q64 _struct.title 'X-ray crystal structure of protein mll3774 from Mesorhizobium loti, Northeast Structural Genomics Consortium Target MlR405.' _struct.pdbx_descriptor 'Mll3774 protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3Q64 _struct_keywords.pdbx_keywords 'Structure Genomics, unknown function' _struct_keywords.text ;Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, alpha-beta protein, Structure Genomics, unknown function ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 20 ? ASN A 30 ? PRO A 20 ASN A 30 1 ? 11 HELX_P HELX_P2 2 ASN A 30 ? PHE A 38 ? ASN A 30 PHE A 38 1 ? 9 HELX_P HELX_P3 3 MSE A 45 ? PHE A 49 ? MSE A 45 PHE A 49 5 ? 5 HELX_P HELX_P4 4 THR A 131 ? LEU A 155 ? THR A 131 LEU A 155 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A PRO 44 C ? ? ? 1_555 A MSE 45 N ? ? A PRO 44 A MSE 45 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale both ? A MSE 45 C ? ? ? 1_555 A PRO 46 N ? ? A MSE 45 A PRO 46 1_555 ? ? ? ? ? ? ? 1.350 ? covale3 covale both ? A GLU 50 C ? ? ? 1_555 A MSE 51 N ? ? A GLU 50 A MSE 51 1_555 ? ? ? ? ? ? ? 1.333 ? covale4 covale both ? A MSE 51 C ? ? ? 1_555 A ASP 52 N ? ? A MSE 51 A ASP 52 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale both ? A ASP 91 C ? ? ? 1_555 A MSE 92 N ? ? A ASP 91 A MSE 92 1_555 ? ? ? ? ? ? ? 1.321 ? covale6 covale both ? A MSE 92 C ? ? ? 1_555 A LEU 93 N ? ? A MSE 92 A LEU 93 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 68 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 68 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 69 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 69 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.19 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 6 ? TYR A 17 ? VAL A 6 TYR A 17 A 2 GLY A 114 ? LEU A 126 ? GLY A 114 LEU A 126 A 3 THR A 97 ? GLU A 111 ? THR A 97 GLU A 111 A 4 ARG A 85 ? PHE A 94 ? ARG A 85 PHE A 94 A 5 HIS A 71 ? VAL A 81 ? HIS A 71 VAL A 81 A 6 LYS A 58 ? GLY A 63 ? LYS A 58 GLY A 63 A 7 GLU A 50 ? MSE A 51 ? GLU A 50 MSE A 51 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 15 ? N ARG A 15 O LEU A 117 ? O LEU A 117 A 2 3 O ARG A 116 ? O ARG A 116 N PHE A 109 ? N PHE A 109 A 3 4 O ALA A 104 ? O ALA A 104 N TYR A 88 ? N TYR A 88 A 4 5 O VAL A 87 ? O VAL A 87 N GLN A 78 ? N GLN A 78 A 5 6 O ALA A 75 ? O ALA A 75 N GLU A 59 ? N GLU A 59 A 6 7 O VAL A 60 ? O VAL A 60 N GLU A 50 ? N GLU A 50 # _database_PDB_matrix.entry_id 3Q64 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3Q64 _atom_sites.fract_transf_matrix[1][1] 0.011577 _atom_sites.fract_transf_matrix[1][2] 0.006684 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013368 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017334 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 HIS 8 8 8 HIS HIS A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 TRP 37 37 37 TRP TRP A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 MSE 45 45 45 MSE MSE A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 MSE 51 51 51 MSE MSE A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 HIS 71 71 71 HIS HIS A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 MSE 92 92 92 MSE MET A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLY 112 112 112 GLY GLY A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 HIS 129 129 129 HIS HIS A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 THR 131 131 131 THR THR A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 HIS 137 137 137 HIS HIS A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 PHE 149 149 149 PHE PHE A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 HIS 157 157 157 HIS HIS A . n A 1 158 HIS 158 158 ? ? ? A . n A 1 159 HIS 159 159 ? ? ? A . n A 1 160 HIS 160 160 ? ? ? A . n A 1 161 HIS 161 161 ? ? ? A . n A 1 162 HIS 162 162 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 201 HOH HOH A . B 2 HOH 2 202 202 HOH HOH A . B 2 HOH 3 203 203 HOH HOH A . B 2 HOH 4 204 204 HOH HOH A . B 2 HOH 5 205 205 HOH HOH A . B 2 HOH 6 206 206 HOH HOH A . B 2 HOH 7 207 207 HOH HOH A . B 2 HOH 8 208 208 HOH HOH A . B 2 HOH 9 209 209 HOH HOH A . B 2 HOH 10 210 210 HOH HOH A . B 2 HOH 11 211 211 HOH HOH A . B 2 HOH 12 212 212 HOH HOH A . B 2 HOH 13 213 213 HOH HOH A . B 2 HOH 14 214 214 HOH HOH A . B 2 HOH 15 215 215 HOH HOH A . B 2 HOH 16 216 216 HOH HOH A . B 2 HOH 17 217 217 HOH HOH A . B 2 HOH 18 218 218 HOH HOH A . B 2 HOH 19 219 219 HOH HOH A . B 2 HOH 20 220 220 HOH HOH A . B 2 HOH 21 221 221 HOH HOH A . B 2 HOH 22 222 222 HOH HOH A . B 2 HOH 23 223 223 HOH HOH A . B 2 HOH 24 224 224 HOH HOH A . B 2 HOH 25 225 225 HOH HOH A . B 2 HOH 26 226 226 HOH HOH A . B 2 HOH 27 227 227 HOH HOH A . B 2 HOH 28 228 228 HOH HOH A . B 2 HOH 29 229 229 HOH HOH A . B 2 HOH 30 230 230 HOH HOH A . B 2 HOH 31 231 231 HOH HOH A . B 2 HOH 32 232 232 HOH HOH A . B 2 HOH 33 233 233 HOH HOH A . B 2 HOH 34 234 234 HOH HOH A . B 2 HOH 35 235 235 HOH HOH A . B 2 HOH 36 236 236 HOH HOH A . B 2 HOH 37 237 237 HOH HOH A . B 2 HOH 38 238 238 HOH HOH A . B 2 HOH 39 239 239 HOH HOH A . B 2 HOH 40 240 240 HOH HOH A . B 2 HOH 41 241 241 HOH HOH A . B 2 HOH 42 242 242 HOH HOH A . B 2 HOH 43 243 243 HOH HOH A . B 2 HOH 44 244 244 HOH HOH A . B 2 HOH 45 245 245 HOH HOH A . B 2 HOH 46 246 246 HOH HOH A . B 2 HOH 47 247 247 HOH HOH A . B 2 HOH 48 248 248 HOH HOH A . B 2 HOH 49 249 249 HOH HOH A . B 2 HOH 50 250 250 HOH HOH A . B 2 HOH 51 251 251 HOH HOH A . B 2 HOH 52 252 252 HOH HOH A . B 2 HOH 53 253 253 HOH HOH A . B 2 HOH 54 254 254 HOH HOH A . B 2 HOH 55 255 255 HOH HOH A . B 2 HOH 56 256 256 HOH HOH A . B 2 HOH 57 257 257 HOH HOH A . B 2 HOH 58 258 258 HOH HOH A . B 2 HOH 59 259 259 HOH HOH A . B 2 HOH 60 260 260 HOH HOH A . B 2 HOH 61 261 261 HOH HOH A . B 2 HOH 62 262 262 HOH HOH A . B 2 HOH 63 263 263 HOH HOH A . B 2 HOH 64 264 264 HOH HOH A . B 2 HOH 65 265 265 HOH HOH A . B 2 HOH 66 266 266 HOH HOH A . B 2 HOH 67 267 267 HOH HOH A . B 2 HOH 68 268 268 HOH HOH A . B 2 HOH 69 269 269 HOH HOH A . B 2 HOH 70 270 270 HOH HOH A . B 2 HOH 71 271 271 HOH HOH A . B 2 HOH 72 272 272 HOH HOH A . B 2 HOH 73 273 273 HOH HOH A . B 2 HOH 74 274 274 HOH HOH A . B 2 HOH 75 275 275 HOH HOH A . B 2 HOH 76 276 276 HOH HOH A . B 2 HOH 77 277 277 HOH HOH A . B 2 HOH 78 278 278 HOH HOH A . B 2 HOH 79 279 279 HOH HOH A . B 2 HOH 80 280 280 HOH HOH A . B 2 HOH 81 281 281 HOH HOH A . B 2 HOH 82 282 282 HOH HOH A . B 2 HOH 83 283 283 HOH HOH A . B 2 HOH 84 284 284 HOH HOH A . B 2 HOH 85 285 285 HOH HOH A . B 2 HOH 86 286 286 HOH HOH A . B 2 HOH 87 287 287 HOH HOH A . B 2 HOH 88 288 288 HOH HOH A . B 2 HOH 89 289 289 HOH HOH A . B 2 HOH 90 290 290 HOH HOH A . B 2 HOH 91 291 291 HOH HOH A . B 2 HOH 92 292 292 HOH HOH A . B 2 HOH 93 293 293 HOH HOH A . B 2 HOH 94 294 294 HOH HOH A . B 2 HOH 95 295 295 HOH HOH A . B 2 HOH 96 296 296 HOH HOH A . B 2 HOH 97 297 297 HOH HOH A . B 2 HOH 98 298 298 HOH HOH A . B 2 HOH 99 299 299 HOH HOH A . B 2 HOH 100 300 300 HOH HOH A . B 2 HOH 101 301 301 HOH HOH A . B 2 HOH 102 302 302 HOH HOH A . B 2 HOH 103 303 303 HOH HOH A . B 2 HOH 104 304 304 HOH HOH A . B 2 HOH 105 305 305 HOH HOH A . B 2 HOH 106 306 306 HOH HOH A . B 2 HOH 107 307 307 HOH HOH A . B 2 HOH 108 308 308 HOH HOH A . B 2 HOH 109 309 309 HOH HOH A . B 2 HOH 110 310 310 HOH HOH A . B 2 HOH 111 311 311 HOH HOH A . B 2 HOH 112 312 312 HOH HOH A . B 2 HOH 113 313 313 HOH HOH A . B 2 HOH 114 314 314 HOH HOH A . B 2 HOH 115 315 315 HOH HOH A . B 2 HOH 116 316 316 HOH HOH A . B 2 HOH 117 317 317 HOH HOH A . B 2 HOH 118 318 318 HOH HOH A . B 2 HOH 119 319 319 HOH HOH A . B 2 HOH 120 320 320 HOH HOH A . B 2 HOH 121 321 321 HOH HOH A . B 2 HOH 122 322 322 HOH HOH A . B 2 HOH 123 323 323 HOH HOH A . B 2 HOH 124 324 324 HOH HOH A . B 2 HOH 125 325 325 HOH HOH A . B 2 HOH 126 326 326 HOH HOH A . B 2 HOH 127 327 327 HOH HOH A . B 2 HOH 128 328 328 HOH HOH A . B 2 HOH 129 329 329 HOH HOH A . B 2 HOH 130 330 330 HOH HOH A . B 2 HOH 131 331 331 HOH HOH A . B 2 HOH 132 332 332 HOH HOH A . B 2 HOH 133 333 333 HOH HOH A . B 2 HOH 134 334 334 HOH HOH A . B 2 HOH 135 335 335 HOH HOH A . B 2 HOH 136 336 336 HOH HOH A . B 2 HOH 137 337 337 HOH HOH A . B 2 HOH 138 338 338 HOH HOH A . B 2 HOH 139 339 339 HOH HOH A . B 2 HOH 140 340 340 HOH HOH A . B 2 HOH 141 341 341 HOH HOH A . B 2 HOH 142 342 342 HOH HOH A . B 2 HOH 143 343 343 HOH HOH A . B 2 HOH 144 344 344 HOH HOH A . B 2 HOH 145 345 345 HOH HOH A . B 2 HOH 146 346 346 HOH HOH A . B 2 HOH 147 347 347 HOH HOH A . B 2 HOH 148 348 348 HOH HOH A . B 2 HOH 149 349 349 HOH HOH A . B 2 HOH 150 350 350 HOH HOH A . B 2 HOH 151 351 351 HOH HOH A . B 2 HOH 152 352 352 HOH HOH A . B 2 HOH 153 353 353 HOH HOH A . B 2 HOH 154 354 354 HOH HOH A . B 2 HOH 155 355 355 HOH HOH A . B 2 HOH 156 356 356 HOH HOH A . B 2 HOH 157 357 357 HOH HOH A . B 2 HOH 158 358 358 HOH HOH A . B 2 HOH 159 359 359 HOH HOH A . B 2 HOH 160 360 360 HOH HOH A . B 2 HOH 161 361 361 HOH HOH A . B 2 HOH 162 362 362 HOH HOH A . B 2 HOH 163 363 363 HOH HOH A . B 2 HOH 164 364 364 HOH HOH A . B 2 HOH 165 365 365 HOH HOH A . B 2 HOH 166 366 366 HOH HOH A . B 2 HOH 167 367 367 HOH HOH A . B 2 HOH 168 368 368 HOH HOH A . B 2 HOH 169 369 369 HOH HOH A . B 2 HOH 170 370 370 HOH HOH A . B 2 HOH 171 371 371 HOH HOH A . B 2 HOH 172 372 372 HOH HOH A . B 2 HOH 173 373 373 HOH HOH A . B 2 HOH 174 374 374 HOH HOH A . B 2 HOH 175 375 375 HOH HOH A . B 2 HOH 176 376 376 HOH HOH A . B 2 HOH 177 377 377 HOH HOH A . B 2 HOH 178 378 378 HOH HOH A . B 2 HOH 179 379 379 HOH HOH A . B 2 HOH 180 380 380 HOH HOH A . B 2 HOH 181 381 381 HOH HOH A . B 2 HOH 182 382 382 HOH HOH A . B 2 HOH 183 383 383 HOH HOH A . B 2 HOH 184 384 384 HOH HOH A . B 2 HOH 185 385 385 HOH HOH A . B 2 HOH 186 386 386 HOH HOH A . B 2 HOH 187 387 387 HOH HOH A . B 2 HOH 188 388 388 HOH HOH A . B 2 HOH 189 389 389 HOH HOH A . B 2 HOH 190 390 390 HOH HOH A . B 2 HOH 191 391 391 HOH HOH A . B 2 HOH 192 392 392 HOH HOH A . B 2 HOH 193 393 393 HOH HOH A . B 2 HOH 194 394 394 HOH HOH A . B 2 HOH 195 395 395 HOH HOH A . B 2 HOH 196 396 396 HOH HOH A . B 2 HOH 197 397 397 HOH HOH A . B 2 HOH 198 398 398 HOH HOH A . B 2 HOH 199 399 399 HOH HOH A . B 2 HOH 200 400 400 HOH HOH A . B 2 HOH 201 401 401 HOH HOH A . B 2 HOH 202 402 402 HOH HOH A . B 2 HOH 203 403 403 HOH HOH A . B 2 HOH 204 404 404 HOH HOH A . B 2 HOH 205 405 405 HOH HOH A . B 2 HOH 206 406 406 HOH HOH A . B 2 HOH 207 407 407 HOH HOH A . B 2 HOH 208 408 408 HOH HOH A . B 2 HOH 209 409 409 HOH HOH A . B 2 HOH 210 410 410 HOH HOH A . B 2 HOH 211 411 411 HOH HOH A . B 2 HOH 212 412 412 HOH HOH A . B 2 HOH 213 413 413 HOH HOH A . B 2 HOH 214 414 414 HOH HOH A . B 2 HOH 215 415 415 HOH HOH A . B 2 HOH 216 416 416 HOH HOH A . B 2 HOH 217 417 417 HOH HOH A . B 2 HOH 218 418 418 HOH HOH A . B 2 HOH 219 419 419 HOH HOH A . B 2 HOH 220 420 420 HOH HOH A . B 2 HOH 221 421 421 HOH HOH A . B 2 HOH 222 422 422 HOH HOH A . B 2 HOH 223 423 423 HOH HOH A . B 2 HOH 224 424 424 HOH HOH A . B 2 HOH 225 425 425 HOH HOH A . B 2 HOH 226 426 426 HOH HOH A . B 2 HOH 227 427 427 HOH HOH A . B 2 HOH 228 428 428 HOH HOH A . B 2 HOH 229 429 429 HOH HOH A . B 2 HOH 230 430 430 HOH HOH A . B 2 HOH 231 431 431 HOH HOH A . B 2 HOH 232 432 432 HOH HOH A . B 2 HOH 233 433 433 HOH HOH A . B 2 HOH 234 434 434 HOH HOH A . B 2 HOH 235 435 435 HOH HOH A . B 2 HOH 236 436 436 HOH HOH A . B 2 HOH 237 437 437 HOH HOH A . B 2 HOH 238 438 438 HOH HOH A . B 2 HOH 239 439 439 HOH HOH A . B 2 HOH 240 440 440 HOH HOH A . B 2 HOH 241 441 441 HOH HOH A . B 2 HOH 242 442 442 HOH HOH A . B 2 HOH 243 443 443 HOH HOH A . B 2 HOH 244 444 444 HOH HOH A . B 2 HOH 245 445 445 HOH HOH A . B 2 HOH 246 446 446 HOH HOH A . B 2 HOH 247 447 447 HOH HOH A . B 2 HOH 248 448 448 HOH HOH A . B 2 HOH 249 449 449 HOH HOH A . B 2 HOH 250 450 450 HOH HOH A . B 2 HOH 251 451 451 HOH HOH A . B 2 HOH 252 452 452 HOH HOH A . B 2 HOH 253 453 453 HOH HOH A . B 2 HOH 254 454 454 HOH HOH A . B 2 HOH 255 455 455 HOH HOH A . B 2 HOH 256 456 456 HOH HOH A . B 2 HOH 257 457 457 HOH HOH A . B 2 HOH 258 458 458 HOH HOH A . B 2 HOH 259 459 459 HOH HOH A . B 2 HOH 260 460 460 HOH HOH A . B 2 HOH 261 461 461 HOH HOH A . B 2 HOH 262 462 462 HOH HOH A . B 2 HOH 263 463 463 HOH HOH A . B 2 HOH 264 464 464 HOH HOH A . B 2 HOH 265 465 465 HOH HOH A . B 2 HOH 266 466 466 HOH HOH A . B 2 HOH 267 467 467 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 45 A MSE 45 ? MET SELENOMETHIONINE 2 A MSE 51 A MSE 51 ? MET SELENOMETHIONINE 3 A MSE 92 A MSE 92 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2150 ? 1 MORE -5 ? 1 'SSA (A^2)' 14860 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 38.4600000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 426 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-01-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-02-22 4 'Structure model' 1 3 2019-07-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 4 'Structure model' '_software.version' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SHELX 'model building' 'then SOLVE/RESOLVE' ? 2 CNS refinement 1.2 ? 3 ADSC 'data collection' Quantum ? 4 CNS refinement . ? 5 XTALVIEW refinement . ? 6 HKL-2000 'data reduction' . ? 7 SCALEPACK 'data scaling' . ? 8 SHELX phasing 'then SOLVE/RESOLVE' ? 9 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 432 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 433 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 43 ? ? -159.88 71.49 2 1 GLN A 84 ? ? -134.88 -42.95 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A HIS 158 ? A HIS 158 4 1 Y 1 A HIS 159 ? A HIS 159 5 1 Y 1 A HIS 160 ? A HIS 160 6 1 Y 1 A HIS 161 ? A HIS 161 7 1 Y 1 A HIS 162 ? A HIS 162 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #