data_3Q7Y # _entry.id 3Q7Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3Q7Y pdb_00003q7y 10.2210/pdb3q7y/pdb RCSB RCSB063307 ? ? WWPDB D_1000063307 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-01-11 2 'Structure model' 1 1 2013-02-06 3 'Structure model' 1 2 2013-02-20 4 'Structure model' 1 3 2013-12-18 5 'Structure model' 1 4 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3Q7Y _pdbx_database_status.recvd_initial_deposition_date 2011-01-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1JQZ 'Human acidic fibroblast growth factor. 141 amino acid form with amino terminal His tag' unspecified PDB 3O4D 'Crystal structure of Symfoil-4P: de novo designed beta-trefoil architecture with symmetric primary structure' unspecified PDB 3Q7W . unspecified PDB 3Q7X . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Blaber, M.' 1 'Lee, J.' 2 # _citation.id primary _citation.title 'Simplified protein design biased for prebiotic amino acids yields a foldable, halophilic protein.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 2135 _citation.page_last 2139 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23341608 _citation.pdbx_database_id_DOI 10.1073/pnas.1219530110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Longo, L.M.' 1 ? primary 'Lee, J.' 2 ? primary 'Blaber, M.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'De novo designed beta-trefoil architecture with symmetric primary structure' 14580.712 1 ? ? ? ? 2 water nat water 18.015 139 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HHHHHHPVLLRSTDTGQWLRINPDGTVDGTRDRSDPGIQWQISPDGNGPVLLRSTDTGQWLRINPDGTVDGTRDRSDPGI QWQISPDGNGPVLLRSTDTGQWLRINPDGTVDGTRDRSDPGIQWQISPDGNG ; _entity_poly.pdbx_seq_one_letter_code_can ;HHHHHHPVLLRSTDTGQWLRINPDGTVDGTRDRSDPGIQWQISPDGNGPVLLRSTDTGQWLRINPDGTVDGTRDRSDPGI QWQISPDGNGPVLLRSTDTGQWLRINPDGTVDGTRDRSDPGIQWQISPDGNG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 PRO n 1 8 VAL n 1 9 LEU n 1 10 LEU n 1 11 ARG n 1 12 SER n 1 13 THR n 1 14 ASP n 1 15 THR n 1 16 GLY n 1 17 GLN n 1 18 TRP n 1 19 LEU n 1 20 ARG n 1 21 ILE n 1 22 ASN n 1 23 PRO n 1 24 ASP n 1 25 GLY n 1 26 THR n 1 27 VAL n 1 28 ASP n 1 29 GLY n 1 30 THR n 1 31 ARG n 1 32 ASP n 1 33 ARG n 1 34 SER n 1 35 ASP n 1 36 PRO n 1 37 GLY n 1 38 ILE n 1 39 GLN n 1 40 TRP n 1 41 GLN n 1 42 ILE n 1 43 SER n 1 44 PRO n 1 45 ASP n 1 46 GLY n 1 47 ASN n 1 48 GLY n 1 49 PRO n 1 50 VAL n 1 51 LEU n 1 52 LEU n 1 53 ARG n 1 54 SER n 1 55 THR n 1 56 ASP n 1 57 THR n 1 58 GLY n 1 59 GLN n 1 60 TRP n 1 61 LEU n 1 62 ARG n 1 63 ILE n 1 64 ASN n 1 65 PRO n 1 66 ASP n 1 67 GLY n 1 68 THR n 1 69 VAL n 1 70 ASP n 1 71 GLY n 1 72 THR n 1 73 ARG n 1 74 ASP n 1 75 ARG n 1 76 SER n 1 77 ASP n 1 78 PRO n 1 79 GLY n 1 80 ILE n 1 81 GLN n 1 82 TRP n 1 83 GLN n 1 84 ILE n 1 85 SER n 1 86 PRO n 1 87 ASP n 1 88 GLY n 1 89 ASN n 1 90 GLY n 1 91 PRO n 1 92 VAL n 1 93 LEU n 1 94 LEU n 1 95 ARG n 1 96 SER n 1 97 THR n 1 98 ASP n 1 99 THR n 1 100 GLY n 1 101 GLN n 1 102 TRP n 1 103 LEU n 1 104 ARG n 1 105 ILE n 1 106 ASN n 1 107 PRO n 1 108 ASP n 1 109 GLY n 1 110 THR n 1 111 VAL n 1 112 ASP n 1 113 GLY n 1 114 THR n 1 115 ARG n 1 116 ASP n 1 117 ARG n 1 118 SER n 1 119 ASP n 1 120 PRO n 1 121 GLY n 1 122 ILE n 1 123 GLN n 1 124 TRP n 1 125 GLN n 1 126 ILE n 1 127 SER n 1 128 PRO n 1 129 ASP n 1 130 GLY n 1 131 ASN n 1 132 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;Synthetic sequence derived from human acidic fibroblast growth factor with a symmetric deconstruction method. The protein produced by this sequence adopts a beta-trefoil architecture with symmetric primary structure ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -5 ? ? ? A . n A 1 2 HIS 2 -4 ? ? ? A . n A 1 3 HIS 3 -3 ? ? ? A . n A 1 4 HIS 4 -2 ? ? ? A . n A 1 5 HIS 5 -1 ? ? ? A . n A 1 6 HIS 6 0 ? ? ? A . n A 1 7 PRO 7 11 11 PRO PRO A . n A 1 8 VAL 8 12 12 VAL VAL A . n A 1 9 LEU 9 13 13 LEU LEU A . n A 1 10 LEU 10 14 14 LEU LEU A . n A 1 11 ARG 11 15 15 ARG ARG A . n A 1 12 SER 12 16 16 SER SER A . n A 1 13 THR 13 17 17 THR THR A . n A 1 14 ASP 14 18 18 ASP ASP A . n A 1 15 THR 15 19 19 THR THR A . n A 1 16 GLY 16 20 20 GLY GLY A . n A 1 17 GLN 17 21 21 GLN GLN A . n A 1 18 TRP 18 22 22 TRP TRP A . n A 1 19 LEU 19 23 23 LEU LEU A . n A 1 20 ARG 20 24 24 ARG ARG A . n A 1 21 ILE 21 25 25 ILE ILE A . n A 1 22 ASN 22 26 26 ASN ASN A . n A 1 23 PRO 23 27 27 PRO PRO A . n A 1 24 ASP 24 28 28 ASP ASP A . n A 1 25 GLY 25 29 29 GLY GLY A . n A 1 26 THR 26 30 30 THR THR A . n A 1 27 VAL 27 31 31 VAL VAL A . n A 1 28 ASP 28 32 32 ASP ASP A . n A 1 29 GLY 29 33 33 GLY GLY A . n A 1 30 THR 30 34 34 THR THR A . n A 1 31 ARG 31 35 35 ARG ARG A . n A 1 32 ASP 32 36 36 ASP ASP A . n A 1 33 ARG 33 37 37 ARG ARG A . n A 1 34 SER 34 38 38 SER SER A . n A 1 35 ASP 35 39 39 ASP ASP A . n A 1 36 PRO 36 40 40 PRO PRO A . n A 1 37 GLY 37 41 41 GLY GLY A . n A 1 38 ILE 38 42 42 ILE ILE A . n A 1 39 GLN 39 43 43 GLN GLN A . n A 1 40 TRP 40 44 44 TRP TRP A . n A 1 41 GLN 41 45 45 GLN GLN A . n A 1 42 ILE 42 46 46 ILE ILE A . n A 1 43 SER 43 47 47 SER SER A . n A 1 44 PRO 44 48 48 PRO PRO A . n A 1 45 ASP 45 49 49 ASP ASP A . n A 1 46 GLY 46 50 50 GLY GLY A . n A 1 47 ASN 47 51 51 ASN ASN A . n A 1 48 GLY 48 52 52 GLY GLY A . n A 1 49 PRO 49 53 53 PRO PRO A . n A 1 50 VAL 50 54 54 VAL VAL A . n A 1 51 LEU 51 55 55 LEU LEU A . n A 1 52 LEU 52 56 56 LEU LEU A . n A 1 53 ARG 53 57 57 ARG ARG A . n A 1 54 SER 54 58 58 SER SER A . n A 1 55 THR 55 59 59 THR THR A . n A 1 56 ASP 56 60 60 ASP ASP A . n A 1 57 THR 57 61 61 THR THR A . n A 1 58 GLY 58 62 62 GLY GLY A . n A 1 59 GLN 59 63 63 GLN GLN A . n A 1 60 TRP 60 64 64 TRP TRP A . n A 1 61 LEU 61 65 65 LEU LEU A . n A 1 62 ARG 62 66 66 ARG ARG A . n A 1 63 ILE 63 67 67 ILE ILE A . n A 1 64 ASN 64 68 68 ASN ASN A . n A 1 65 PRO 65 69 69 PRO PRO A . n A 1 66 ASP 66 70 70 ASP ASP A . n A 1 67 GLY 67 71 71 GLY GLY A . n A 1 68 THR 68 72 72 THR THR A . n A 1 69 VAL 69 73 73 VAL VAL A . n A 1 70 ASP 70 74 74 ASP ASP A . n A 1 71 GLY 71 75 75 GLY GLY A . n A 1 72 THR 72 76 76 THR THR A . n A 1 73 ARG 73 76 76 ARG ARG A A n A 1 74 ASP 74 77 77 ASP ASP A . n A 1 75 ARG 75 78 78 ARG ARG A . n A 1 76 SER 76 79 79 SER SER A . n A 1 77 ASP 77 80 80 ASP ASP A . n A 1 78 PRO 78 81 81 PRO PRO A . n A 1 79 GLY 79 82 82 GLY GLY A . n A 1 80 ILE 80 83 83 ILE ILE A . n A 1 81 GLN 81 84 84 GLN GLN A . n A 1 82 TRP 82 85 85 TRP TRP A . n A 1 83 GLN 83 86 86 GLN GLN A . n A 1 84 ILE 84 87 87 ILE ILE A . n A 1 85 SER 85 88 88 SER SER A . n A 1 86 PRO 86 89 89 PRO PRO A . n A 1 87 ASP 87 90 90 ASP ASP A . n A 1 88 GLY 88 91 91 GLY GLY A . n A 1 89 ASN 89 92 92 ASN ASN A . n A 1 90 GLY 90 93 93 GLY GLY A . n A 1 91 PRO 91 94 94 PRO PRO A . n A 1 92 VAL 92 95 95 VAL VAL A . n A 1 93 LEU 93 96 96 LEU LEU A . n A 1 94 LEU 94 97 97 LEU LEU A . n A 1 95 ARG 95 98 98 ARG ARG A . n A 1 96 SER 96 99 99 SER SER A . n A 1 97 THR 97 100 100 THR THR A . n A 1 98 ASP 98 101 101 ASP ASP A . n A 1 99 THR 99 102 102 THR THR A . n A 1 100 GLY 100 103 103 GLY GLY A . n A 1 101 GLN 101 107 107 GLN GLN A . n A 1 102 TRP 102 108 108 TRP TRP A . n A 1 103 LEU 103 109 109 LEU LEU A . n A 1 104 ARG 104 110 110 ARG ARG A . n A 1 105 ILE 105 111 111 ILE ILE A . n A 1 106 ASN 106 112 112 ASN ASN A . n A 1 107 PRO 107 113 113 PRO PRO A . n A 1 108 ASP 108 114 114 ASP ASP A . n A 1 109 GLY 109 115 115 GLY GLY A . n A 1 110 THR 110 116 116 THR THR A . n A 1 111 VAL 111 117 117 VAL VAL A . n A 1 112 ASP 112 118 118 ASP ASP A . n A 1 113 GLY 113 119 119 GLY GLY A . n A 1 114 THR 114 123 123 THR THR A . n A 1 115 ARG 115 123 123 ARG ARG A A n A 1 116 ASP 116 124 124 ASP ASP A . n A 1 117 ARG 117 125 125 ARG ARG A . n A 1 118 SER 118 126 126 SER SER A . n A 1 119 ASP 119 127 127 ASP ASP A . n A 1 120 PRO 120 128 128 PRO PRO A . n A 1 121 GLY 121 129 129 GLY GLY A . n A 1 122 ILE 122 130 130 ILE ILE A . n A 1 123 GLN 123 131 131 GLN GLN A . n A 1 124 TRP 124 132 132 TRP TRP A . n A 1 125 GLN 125 133 133 GLN GLN A . n A 1 126 ILE 126 134 134 ILE ILE A . n A 1 127 SER 127 135 135 SER SER A . n A 1 128 PRO 128 136 136 PRO PRO A . n A 1 129 ASP 129 137 137 ASP ASP A . n A 1 130 GLY 130 138 138 GLY GLY A . n A 1 131 ASN 131 139 ? ? ? A . n A 1 132 GLY 132 140 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 104 104 HOH HOH A . B 2 HOH 6 105 105 HOH HOH A . B 2 HOH 7 106 106 HOH HOH A . B 2 HOH 8 120 120 HOH HOH A . B 2 HOH 9 121 121 HOH HOH A . B 2 HOH 10 122 122 HOH HOH A . B 2 HOH 11 141 5 HOH HOH A . B 2 HOH 12 142 6 HOH HOH A . B 2 HOH 13 143 7 HOH HOH A . B 2 HOH 14 144 8 HOH HOH A . B 2 HOH 15 145 9 HOH HOH A . B 2 HOH 16 146 10 HOH HOH A . B 2 HOH 17 147 11 HOH HOH A . B 2 HOH 18 148 12 HOH HOH A . B 2 HOH 19 149 13 HOH HOH A . B 2 HOH 20 150 14 HOH HOH A . B 2 HOH 21 151 15 HOH HOH A . B 2 HOH 22 152 16 HOH HOH A . B 2 HOH 23 153 17 HOH HOH A . B 2 HOH 24 154 18 HOH HOH A . B 2 HOH 25 155 19 HOH HOH A . B 2 HOH 26 156 20 HOH HOH A . B 2 HOH 27 157 21 HOH HOH A . B 2 HOH 28 158 22 HOH HOH A . B 2 HOH 29 159 23 HOH HOH A . B 2 HOH 30 160 24 HOH HOH A . B 2 HOH 31 161 25 HOH HOH A . B 2 HOH 32 162 26 HOH HOH A . B 2 HOH 33 163 27 HOH HOH A . B 2 HOH 34 164 28 HOH HOH A . B 2 HOH 35 165 29 HOH HOH A . B 2 HOH 36 166 30 HOH HOH A . B 2 HOH 37 167 31 HOH HOH A . B 2 HOH 38 168 32 HOH HOH A . B 2 HOH 39 169 33 HOH HOH A . B 2 HOH 40 170 34 HOH HOH A . B 2 HOH 41 171 35 HOH HOH A . B 2 HOH 42 172 36 HOH HOH A . B 2 HOH 43 173 37 HOH HOH A . B 2 HOH 44 174 38 HOH HOH A . B 2 HOH 45 175 39 HOH HOH A . B 2 HOH 46 176 40 HOH HOH A . B 2 HOH 47 177 41 HOH HOH A . B 2 HOH 48 178 42 HOH HOH A . B 2 HOH 49 179 43 HOH HOH A . B 2 HOH 50 180 44 HOH HOH A . B 2 HOH 51 181 45 HOH HOH A . B 2 HOH 52 182 46 HOH HOH A . B 2 HOH 53 183 47 HOH HOH A . B 2 HOH 54 184 48 HOH HOH A . B 2 HOH 55 185 49 HOH HOH A . B 2 HOH 56 186 50 HOH HOH A . B 2 HOH 57 187 51 HOH HOH A . B 2 HOH 58 188 52 HOH HOH A . B 2 HOH 59 189 53 HOH HOH A . B 2 HOH 60 190 54 HOH HOH A . B 2 HOH 61 191 55 HOH HOH A . B 2 HOH 62 192 56 HOH HOH A . B 2 HOH 63 193 57 HOH HOH A . B 2 HOH 64 194 58 HOH HOH A . B 2 HOH 65 195 59 HOH HOH A . B 2 HOH 66 196 60 HOH HOH A . B 2 HOH 67 197 61 HOH HOH A . B 2 HOH 68 198 62 HOH HOH A . B 2 HOH 69 199 63 HOH HOH A . B 2 HOH 70 200 64 HOH HOH A . B 2 HOH 71 201 65 HOH HOH A . B 2 HOH 72 202 66 HOH HOH A . B 2 HOH 73 203 67 HOH HOH A . B 2 HOH 74 204 68 HOH HOH A . B 2 HOH 75 205 69 HOH HOH A . B 2 HOH 76 206 70 HOH HOH A . B 2 HOH 77 207 71 HOH HOH A . B 2 HOH 78 208 72 HOH HOH A . B 2 HOH 79 209 73 HOH HOH A . B 2 HOH 80 210 74 HOH HOH A . B 2 HOH 81 211 75 HOH HOH A . B 2 HOH 82 212 76 HOH HOH A . B 2 HOH 83 213 77 HOH HOH A . B 2 HOH 84 214 78 HOH HOH A . B 2 HOH 85 215 79 HOH HOH A . B 2 HOH 86 216 80 HOH HOH A . B 2 HOH 87 217 81 HOH HOH A . B 2 HOH 88 218 82 HOH HOH A . B 2 HOH 89 219 83 HOH HOH A . B 2 HOH 90 220 84 HOH HOH A . B 2 HOH 91 221 85 HOH HOH A . B 2 HOH 92 222 86 HOH HOH A . B 2 HOH 93 223 87 HOH HOH A . B 2 HOH 94 224 88 HOH HOH A . B 2 HOH 95 225 89 HOH HOH A . B 2 HOH 96 226 90 HOH HOH A . B 2 HOH 97 227 91 HOH HOH A . B 2 HOH 98 228 92 HOH HOH A . B 2 HOH 99 229 93 HOH HOH A . B 2 HOH 100 230 94 HOH HOH A . B 2 HOH 101 231 95 HOH HOH A . B 2 HOH 102 232 96 HOH HOH A . B 2 HOH 103 233 97 HOH HOH A . B 2 HOH 104 234 98 HOH HOH A . B 2 HOH 105 235 99 HOH HOH A . B 2 HOH 106 236 100 HOH HOH A . B 2 HOH 107 237 101 HOH HOH A . B 2 HOH 108 238 102 HOH HOH A . B 2 HOH 109 239 103 HOH HOH A . B 2 HOH 110 240 107 HOH HOH A . B 2 HOH 111 241 108 HOH HOH A . B 2 HOH 112 242 109 HOH HOH A . B 2 HOH 113 243 110 HOH HOH A . B 2 HOH 114 244 111 HOH HOH A . B 2 HOH 115 245 112 HOH HOH A . B 2 HOH 116 246 113 HOH HOH A . B 2 HOH 117 247 114 HOH HOH A . B 2 HOH 118 248 115 HOH HOH A . B 2 HOH 119 249 116 HOH HOH A . B 2 HOH 120 250 117 HOH HOH A . B 2 HOH 121 251 118 HOH HOH A . B 2 HOH 122 252 119 HOH HOH A . B 2 HOH 123 253 123 HOH HOH A . B 2 HOH 124 254 124 HOH HOH A . B 2 HOH 125 255 125 HOH HOH A . B 2 HOH 126 256 126 HOH HOH A . B 2 HOH 127 257 127 HOH HOH A . B 2 HOH 128 258 128 HOH HOH A . B 2 HOH 129 259 129 HOH HOH A . B 2 HOH 130 260 130 HOH HOH A . B 2 HOH 131 261 131 HOH HOH A . B 2 HOH 132 262 132 HOH HOH A . B 2 HOH 133 263 133 HOH HOH A . B 2 HOH 134 264 134 HOH HOH A . B 2 HOH 135 265 135 HOH HOH A . B 2 HOH 136 266 136 HOH HOH A . B 2 HOH 137 267 137 HOH HOH A . B 2 HOH 138 268 138 HOH HOH A . B 2 HOH 139 269 139 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASES phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.4_486)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3Q7Y _cell.length_a 39.485 _cell.length_b 42.614 _cell.length_c 66.852 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3Q7Y _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3Q7Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.93 _exptl_crystal.density_percent_sol 36.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.8 _exptl_crystal_grow.pdbx_details '1.8M ammonium sulfate, 0.1M sodium acetate, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-09-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Si _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 3Q7Y _reflns.observed_criterion_sigma_I 3 _reflns.observed_criterion_sigma_F 3 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.45 _reflns.number_obs 18067 _reflns.number_all 20607 _reflns.percent_possible_obs 87.7 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 49.1 _reflns.B_iso_Wilson_estimate 12.39 _reflns.pdbx_redundancy 6.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.48 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs 0.260 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1004 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3Q7Y _refine.ls_number_reflns_obs 18067 _refine.ls_number_reflns_all 20607 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 4.48 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.998 _refine.ls_d_res_high 1.45 _refine.ls_percent_reflns_obs 87.67 _refine.ls_R_factor_obs 0.1942 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1927 _refine.ls_R_factor_R_free 0.2221 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.99 _refine.ls_number_reflns_R_free 902 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 4.9385 _refine.aniso_B[2][2] 0.1170 _refine.aniso_B[3][3] -5.0555 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.374 _refine.solvent_model_param_bsol 36.404 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.83 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.14 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 957 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 139 _refine_hist.number_atoms_total 1096 _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 33.998 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 1007 'X-RAY DIFFRACTION' ? f_angle_d 0.939 ? ? 1386 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 13.061 ? ? 387 'X-RAY DIFFRACTION' ? f_chiral_restr 0.057 ? ? 149 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 190 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.45 1.5417 1972 0.1841 62.00 0.2001 . . 107 . . 1972 . 'X-RAY DIFFRACTION' . 1.5417 1.6607 2577 0.1933 80.00 0.2382 . . 132 . . 2577 . 'X-RAY DIFFRACTION' . 1.6607 1.8278 2871 0.1947 89.00 0.2327 . . 146 . . 2871 . 'X-RAY DIFFRACTION' . 1.8278 2.0922 3116 0.1914 96.00 0.2374 . . 175 . . 3116 . 'X-RAY DIFFRACTION' . 2.0922 2.6359 3237 0.2000 99.00 0.2247 . . 166 . . 3237 . 'X-RAY DIFFRACTION' . 2.6359 34.0071 3392 0.1900 99.00 0.2133 . . 176 . . 3392 . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3Q7Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3Q7Y _struct.title ;Crystal structure of K15R/E18D/Y22W/H41G/F44W/E51D/E53P/K57R/E60D/Y64W/H82G/F85W/E90D/E94P/K98R/E101D/Y108W/H129G/F132W/E137D Symfoil-4P: de novo designed beta-trefoil architecture with symmetric primary structure ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3Q7Y _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'beta-trefoil, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3Q7Y _struct_ref.pdbx_db_accession 3Q7Y _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3Q7Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 132 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3Q7Y _struct_ref_seq.db_align_beg -5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 140 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -5 _struct_ref_seq.pdbx_auth_seq_align_end 140 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 35 ? ILE A 38 ? ASP A 39 ILE A 42 5 ? 4 HELX_P HELX_P2 2 ASP A 77 ? ILE A 80 ? ASP A 80 ILE A 83 5 ? 4 HELX_P HELX_P3 3 ASP A 119 ? ILE A 122 ? ASP A 127 ILE A 130 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 2 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 8 ? SER A 12 ? VAL A 12 SER A 16 A 2 TRP A 124 ? PRO A 128 ? TRP A 132 PRO A 136 B 1 TRP A 18 ? ILE A 21 ? TRP A 22 ILE A 25 B 2 VAL A 27 ? THR A 30 ? VAL A 31 THR A 34 C 1 TRP A 40 ? PRO A 44 ? TRP A 44 PRO A 48 C 2 VAL A 50 ? SER A 54 ? VAL A 54 SER A 58 D 1 TRP A 60 ? ILE A 63 ? TRP A 64 ILE A 67 D 2 VAL A 69 ? THR A 72 ? VAL A 73 THR A 76 E 1 TRP A 82 ? PRO A 86 ? TRP A 85 PRO A 89 E 2 VAL A 92 ? SER A 96 ? VAL A 95 SER A 99 F 1 TRP A 102 ? ILE A 105 ? TRP A 108 ILE A 111 F 2 VAL A 111 ? THR A 114 ? VAL A 117 THR A 123 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 11 ? N ARG A 15 O GLN A 125 ? O GLN A 133 B 1 2 N ARG A 20 ? N ARG A 24 O ASP A 28 ? O ASP A 32 C 1 2 N SER A 43 ? N SER A 47 O LEU A 51 ? O LEU A 55 D 1 2 N ARG A 62 ? N ARG A 66 O ASP A 70 ? O ASP A 74 E 1 2 N GLN A 83 ? N GLN A 86 O ARG A 95 ? O ARG A 98 F 1 2 N ARG A 104 ? N ARG A 110 O ASP A 112 ? O ASP A 118 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS -5 ? A HIS 1 2 1 Y 1 A HIS -4 ? A HIS 2 3 1 Y 1 A HIS -3 ? A HIS 3 4 1 Y 1 A HIS -2 ? A HIS 4 5 1 Y 1 A HIS -1 ? A HIS 5 6 1 Y 1 A HIS 0 ? A HIS 6 7 1 Y 1 A ASN 139 ? A ASN 131 8 1 Y 1 A GLY 140 ? A GLY 132 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASN N N N N 28 ASN CA C N S 29 ASN C C N N 30 ASN O O N N 31 ASN CB C N N 32 ASN CG C N N 33 ASN OD1 O N N 34 ASN ND2 N N N 35 ASN OXT O N N 36 ASN H H N N 37 ASN H2 H N N 38 ASN HA H N N 39 ASN HB2 H N N 40 ASN HB3 H N N 41 ASN HD21 H N N 42 ASN HD22 H N N 43 ASN HXT H N N 44 ASP N N N N 45 ASP CA C N S 46 ASP C C N N 47 ASP O O N N 48 ASP CB C N N 49 ASP CG C N N 50 ASP OD1 O N N 51 ASP OD2 O N N 52 ASP OXT O N N 53 ASP H H N N 54 ASP H2 H N N 55 ASP HA H N N 56 ASP HB2 H N N 57 ASP HB3 H N N 58 ASP HD2 H N N 59 ASP HXT H N N 60 GLN N N N N 61 GLN CA C N S 62 GLN C C N N 63 GLN O O N N 64 GLN CB C N N 65 GLN CG C N N 66 GLN CD C N N 67 GLN OE1 O N N 68 GLN NE2 N N N 69 GLN OXT O N N 70 GLN H H N N 71 GLN H2 H N N 72 GLN HA H N N 73 GLN HB2 H N N 74 GLN HB3 H N N 75 GLN HG2 H N N 76 GLN HG3 H N N 77 GLN HE21 H N N 78 GLN HE22 H N N 79 GLN HXT H N N 80 GLY N N N N 81 GLY CA C N N 82 GLY C C N N 83 GLY O O N N 84 GLY OXT O N N 85 GLY H H N N 86 GLY H2 H N N 87 GLY HA2 H N N 88 GLY HA3 H N N 89 GLY HXT H N N 90 HIS N N N N 91 HIS CA C N S 92 HIS C C N N 93 HIS O O N N 94 HIS CB C N N 95 HIS CG C Y N 96 HIS ND1 N Y N 97 HIS CD2 C Y N 98 HIS CE1 C Y N 99 HIS NE2 N Y N 100 HIS OXT O N N 101 HIS H H N N 102 HIS H2 H N N 103 HIS HA H N N 104 HIS HB2 H N N 105 HIS HB3 H N N 106 HIS HD1 H N N 107 HIS HD2 H N N 108 HIS HE1 H N N 109 HIS HE2 H N N 110 HIS HXT H N N 111 HOH O O N N 112 HOH H1 H N N 113 HOH H2 H N N 114 ILE N N N N 115 ILE CA C N S 116 ILE C C N N 117 ILE O O N N 118 ILE CB C N S 119 ILE CG1 C N N 120 ILE CG2 C N N 121 ILE CD1 C N N 122 ILE OXT O N N 123 ILE H H N N 124 ILE H2 H N N 125 ILE HA H N N 126 ILE HB H N N 127 ILE HG12 H N N 128 ILE HG13 H N N 129 ILE HG21 H N N 130 ILE HG22 H N N 131 ILE HG23 H N N 132 ILE HD11 H N N 133 ILE HD12 H N N 134 ILE HD13 H N N 135 ILE HXT H N N 136 LEU N N N N 137 LEU CA C N S 138 LEU C C N N 139 LEU O O N N 140 LEU CB C N N 141 LEU CG C N N 142 LEU CD1 C N N 143 LEU CD2 C N N 144 LEU OXT O N N 145 LEU H H N N 146 LEU H2 H N N 147 LEU HA H N N 148 LEU HB2 H N N 149 LEU HB3 H N N 150 LEU HG H N N 151 LEU HD11 H N N 152 LEU HD12 H N N 153 LEU HD13 H N N 154 LEU HD21 H N N 155 LEU HD22 H N N 156 LEU HD23 H N N 157 LEU HXT H N N 158 PRO N N N N 159 PRO CA C N S 160 PRO C C N N 161 PRO O O N N 162 PRO CB C N N 163 PRO CG C N N 164 PRO CD C N N 165 PRO OXT O N N 166 PRO H H N N 167 PRO HA H N N 168 PRO HB2 H N N 169 PRO HB3 H N N 170 PRO HG2 H N N 171 PRO HG3 H N N 172 PRO HD2 H N N 173 PRO HD3 H N N 174 PRO HXT H N N 175 SER N N N N 176 SER CA C N S 177 SER C C N N 178 SER O O N N 179 SER CB C N N 180 SER OG O N N 181 SER OXT O N N 182 SER H H N N 183 SER H2 H N N 184 SER HA H N N 185 SER HB2 H N N 186 SER HB3 H N N 187 SER HG H N N 188 SER HXT H N N 189 THR N N N N 190 THR CA C N S 191 THR C C N N 192 THR O O N N 193 THR CB C N R 194 THR OG1 O N N 195 THR CG2 C N N 196 THR OXT O N N 197 THR H H N N 198 THR H2 H N N 199 THR HA H N N 200 THR HB H N N 201 THR HG1 H N N 202 THR HG21 H N N 203 THR HG22 H N N 204 THR HG23 H N N 205 THR HXT H N N 206 TRP N N N N 207 TRP CA C N S 208 TRP C C N N 209 TRP O O N N 210 TRP CB C N N 211 TRP CG C Y N 212 TRP CD1 C Y N 213 TRP CD2 C Y N 214 TRP NE1 N Y N 215 TRP CE2 C Y N 216 TRP CE3 C Y N 217 TRP CZ2 C Y N 218 TRP CZ3 C Y N 219 TRP CH2 C Y N 220 TRP OXT O N N 221 TRP H H N N 222 TRP H2 H N N 223 TRP HA H N N 224 TRP HB2 H N N 225 TRP HB3 H N N 226 TRP HD1 H N N 227 TRP HE1 H N N 228 TRP HE3 H N N 229 TRP HZ2 H N N 230 TRP HZ3 H N N 231 TRP HH2 H N N 232 TRP HXT H N N 233 VAL N N N N 234 VAL CA C N S 235 VAL C C N N 236 VAL O O N N 237 VAL CB C N N 238 VAL CG1 C N N 239 VAL CG2 C N N 240 VAL OXT O N N 241 VAL H H N N 242 VAL H2 H N N 243 VAL HA H N N 244 VAL HB H N N 245 VAL HG11 H N N 246 VAL HG12 H N N 247 VAL HG13 H N N 248 VAL HG21 H N N 249 VAL HG22 H N N 250 VAL HG23 H N N 251 VAL HXT H N N 252 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASN N CA sing N N 27 ASN N H sing N N 28 ASN N H2 sing N N 29 ASN CA C sing N N 30 ASN CA CB sing N N 31 ASN CA HA sing N N 32 ASN C O doub N N 33 ASN C OXT sing N N 34 ASN CB CG sing N N 35 ASN CB HB2 sing N N 36 ASN CB HB3 sing N N 37 ASN CG OD1 doub N N 38 ASN CG ND2 sing N N 39 ASN ND2 HD21 sing N N 40 ASN ND2 HD22 sing N N 41 ASN OXT HXT sing N N 42 ASP N CA sing N N 43 ASP N H sing N N 44 ASP N H2 sing N N 45 ASP CA C sing N N 46 ASP CA CB sing N N 47 ASP CA HA sing N N 48 ASP C O doub N N 49 ASP C OXT sing N N 50 ASP CB CG sing N N 51 ASP CB HB2 sing N N 52 ASP CB HB3 sing N N 53 ASP CG OD1 doub N N 54 ASP CG OD2 sing N N 55 ASP OD2 HD2 sing N N 56 ASP OXT HXT sing N N 57 GLN N CA sing N N 58 GLN N H sing N N 59 GLN N H2 sing N N 60 GLN CA C sing N N 61 GLN CA CB sing N N 62 GLN CA HA sing N N 63 GLN C O doub N N 64 GLN C OXT sing N N 65 GLN CB CG sing N N 66 GLN CB HB2 sing N N 67 GLN CB HB3 sing N N 68 GLN CG CD sing N N 69 GLN CG HG2 sing N N 70 GLN CG HG3 sing N N 71 GLN CD OE1 doub N N 72 GLN CD NE2 sing N N 73 GLN NE2 HE21 sing N N 74 GLN NE2 HE22 sing N N 75 GLN OXT HXT sing N N 76 GLY N CA sing N N 77 GLY N H sing N N 78 GLY N H2 sing N N 79 GLY CA C sing N N 80 GLY CA HA2 sing N N 81 GLY CA HA3 sing N N 82 GLY C O doub N N 83 GLY C OXT sing N N 84 GLY OXT HXT sing N N 85 HIS N CA sing N N 86 HIS N H sing N N 87 HIS N H2 sing N N 88 HIS CA C sing N N 89 HIS CA CB sing N N 90 HIS CA HA sing N N 91 HIS C O doub N N 92 HIS C OXT sing N N 93 HIS CB CG sing N N 94 HIS CB HB2 sing N N 95 HIS CB HB3 sing N N 96 HIS CG ND1 sing Y N 97 HIS CG CD2 doub Y N 98 HIS ND1 CE1 doub Y N 99 HIS ND1 HD1 sing N N 100 HIS CD2 NE2 sing Y N 101 HIS CD2 HD2 sing N N 102 HIS CE1 NE2 sing Y N 103 HIS CE1 HE1 sing N N 104 HIS NE2 HE2 sing N N 105 HIS OXT HXT sing N N 106 HOH O H1 sing N N 107 HOH O H2 sing N N 108 ILE N CA sing N N 109 ILE N H sing N N 110 ILE N H2 sing N N 111 ILE CA C sing N N 112 ILE CA CB sing N N 113 ILE CA HA sing N N 114 ILE C O doub N N 115 ILE C OXT sing N N 116 ILE CB CG1 sing N N 117 ILE CB CG2 sing N N 118 ILE CB HB sing N N 119 ILE CG1 CD1 sing N N 120 ILE CG1 HG12 sing N N 121 ILE CG1 HG13 sing N N 122 ILE CG2 HG21 sing N N 123 ILE CG2 HG22 sing N N 124 ILE CG2 HG23 sing N N 125 ILE CD1 HD11 sing N N 126 ILE CD1 HD12 sing N N 127 ILE CD1 HD13 sing N N 128 ILE OXT HXT sing N N 129 LEU N CA sing N N 130 LEU N H sing N N 131 LEU N H2 sing N N 132 LEU CA C sing N N 133 LEU CA CB sing N N 134 LEU CA HA sing N N 135 LEU C O doub N N 136 LEU C OXT sing N N 137 LEU CB CG sing N N 138 LEU CB HB2 sing N N 139 LEU CB HB3 sing N N 140 LEU CG CD1 sing N N 141 LEU CG CD2 sing N N 142 LEU CG HG sing N N 143 LEU CD1 HD11 sing N N 144 LEU CD1 HD12 sing N N 145 LEU CD1 HD13 sing N N 146 LEU CD2 HD21 sing N N 147 LEU CD2 HD22 sing N N 148 LEU CD2 HD23 sing N N 149 LEU OXT HXT sing N N 150 PRO N CA sing N N 151 PRO N CD sing N N 152 PRO N H sing N N 153 PRO CA C sing N N 154 PRO CA CB sing N N 155 PRO CA HA sing N N 156 PRO C O doub N N 157 PRO C OXT sing N N 158 PRO CB CG sing N N 159 PRO CB HB2 sing N N 160 PRO CB HB3 sing N N 161 PRO CG CD sing N N 162 PRO CG HG2 sing N N 163 PRO CG HG3 sing N N 164 PRO CD HD2 sing N N 165 PRO CD HD3 sing N N 166 PRO OXT HXT sing N N 167 SER N CA sing N N 168 SER N H sing N N 169 SER N H2 sing N N 170 SER CA C sing N N 171 SER CA CB sing N N 172 SER CA HA sing N N 173 SER C O doub N N 174 SER C OXT sing N N 175 SER CB OG sing N N 176 SER CB HB2 sing N N 177 SER CB HB3 sing N N 178 SER OG HG sing N N 179 SER OXT HXT sing N N 180 THR N CA sing N N 181 THR N H sing N N 182 THR N H2 sing N N 183 THR CA C sing N N 184 THR CA CB sing N N 185 THR CA HA sing N N 186 THR C O doub N N 187 THR C OXT sing N N 188 THR CB OG1 sing N N 189 THR CB CG2 sing N N 190 THR CB HB sing N N 191 THR OG1 HG1 sing N N 192 THR CG2 HG21 sing N N 193 THR CG2 HG22 sing N N 194 THR CG2 HG23 sing N N 195 THR OXT HXT sing N N 196 TRP N CA sing N N 197 TRP N H sing N N 198 TRP N H2 sing N N 199 TRP CA C sing N N 200 TRP CA CB sing N N 201 TRP CA HA sing N N 202 TRP C O doub N N 203 TRP C OXT sing N N 204 TRP CB CG sing N N 205 TRP CB HB2 sing N N 206 TRP CB HB3 sing N N 207 TRP CG CD1 doub Y N 208 TRP CG CD2 sing Y N 209 TRP CD1 NE1 sing Y N 210 TRP CD1 HD1 sing N N 211 TRP CD2 CE2 doub Y N 212 TRP CD2 CE3 sing Y N 213 TRP NE1 CE2 sing Y N 214 TRP NE1 HE1 sing N N 215 TRP CE2 CZ2 sing Y N 216 TRP CE3 CZ3 doub Y N 217 TRP CE3 HE3 sing N N 218 TRP CZ2 CH2 doub Y N 219 TRP CZ2 HZ2 sing N N 220 TRP CZ3 CH2 sing Y N 221 TRP CZ3 HZ3 sing N N 222 TRP CH2 HH2 sing N N 223 TRP OXT HXT sing N N 224 VAL N CA sing N N 225 VAL N H sing N N 226 VAL N H2 sing N N 227 VAL CA C sing N N 228 VAL CA CB sing N N 229 VAL CA HA sing N N 230 VAL C O doub N N 231 VAL C OXT sing N N 232 VAL CB CG1 sing N N 233 VAL CB CG2 sing N N 234 VAL CB HB sing N N 235 VAL CG1 HG11 sing N N 236 VAL CG1 HG12 sing N N 237 VAL CG1 HG13 sing N N 238 VAL CG2 HG21 sing N N 239 VAL CG2 HG22 sing N N 240 VAL CG2 HG23 sing N N 241 VAL OXT HXT sing N N 242 # _atom_sites.entry_id 3Q7Y _atom_sites.fract_transf_matrix[1][1] 0.025326 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023466 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014958 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_