data_3Q9S # _entry.id 3Q9S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3Q9S RCSB RCSB063373 WWPDB D_1000063373 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3Q9V _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3Q9S _pdbx_database_status.recvd_initial_deposition_date 2011-01-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, Y.' 1 'Gao, Z.Q.' 2 'Dong, Y.H.' 3 'Ji, C.N.' 4 # _citation.id primary _citation.title 'Crystal structure of rra(1-215) from Deinococcus Radiodurans' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Liu, Y.' 1 primary 'Gao, Z.Q.' 2 primary 'Dong, Y.H.' 3 primary 'Ji, C.N.' 4 # _cell.entry_id 3Q9S _cell.length_a 98.542 _cell.length_b 98.542 _cell.length_c 54.447 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3Q9S _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding response regulator' 28472.008 1 ? ? 'N-terminal residues 1-215' ? 2 water nat water 18.015 52 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGENLYFEGSH(MSE)AS(MSE)TGGQQ(MSE)GR(MSE)NEQRILVIEDDHDIANVLR(MSE)D LTDAGYVVDHADSA(MSE)NGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGAD DYLIKPFHPDELLARVKVQLRQRTSESLS(MSE)GDLTLDPQKRLVTYKGEELRLSPKEFDILALLIRQPGRVYSRQEIG QEIWQGRLPEGSNVVDVH(MSE)ANLRAKLRDLDGYGLLRTVRGV ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGENLYFEGSHMASMTGGQQMGRMNEQRILVIEDDHDIANVLRMDLTDAGYVVDHADSAMNGLIKARED HPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGADDYLIKPFHPDELLARVKVQLRQRTSESL SMGDLTLDPQKRLVTYKGEELRLSPKEFDILALLIRQPGRVYSRQEIGQEIWQGRLPEGSNVVDVHMANLRAKLRDLDGY GLLRTVRGV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 GLU n 1 15 ASN n 1 16 LEU n 1 17 TYR n 1 18 PHE n 1 19 GLU n 1 20 GLY n 1 21 SER n 1 22 HIS n 1 23 MSE n 1 24 ALA n 1 25 SER n 1 26 MSE n 1 27 THR n 1 28 GLY n 1 29 GLY n 1 30 GLN n 1 31 GLN n 1 32 MSE n 1 33 GLY n 1 34 ARG n 1 35 MSE n 1 36 ASN n 1 37 GLU n 1 38 GLN n 1 39 ARG n 1 40 ILE n 1 41 LEU n 1 42 VAL n 1 43 ILE n 1 44 GLU n 1 45 ASP n 1 46 ASP n 1 47 HIS n 1 48 ASP n 1 49 ILE n 1 50 ALA n 1 51 ASN n 1 52 VAL n 1 53 LEU n 1 54 ARG n 1 55 MSE n 1 56 ASP n 1 57 LEU n 1 58 THR n 1 59 ASP n 1 60 ALA n 1 61 GLY n 1 62 TYR n 1 63 VAL n 1 64 VAL n 1 65 ASP n 1 66 HIS n 1 67 ALA n 1 68 ASP n 1 69 SER n 1 70 ALA n 1 71 MSE n 1 72 ASN n 1 73 GLY n 1 74 LEU n 1 75 ILE n 1 76 LYS n 1 77 ALA n 1 78 ARG n 1 79 GLU n 1 80 ASP n 1 81 HIS n 1 82 PRO n 1 83 ASP n 1 84 LEU n 1 85 ILE n 1 86 LEU n 1 87 LEU n 1 88 ASP n 1 89 LEU n 1 90 GLY n 1 91 LEU n 1 92 PRO n 1 93 ASP n 1 94 PHE n 1 95 ASP n 1 96 GLY n 1 97 GLY n 1 98 ASP n 1 99 VAL n 1 100 VAL n 1 101 GLN n 1 102 ARG n 1 103 LEU n 1 104 ARG n 1 105 LYS n 1 106 ASN n 1 107 SER n 1 108 ALA n 1 109 LEU n 1 110 PRO n 1 111 ILE n 1 112 ILE n 1 113 VAL n 1 114 LEU n 1 115 THR n 1 116 ALA n 1 117 ARG n 1 118 ASP n 1 119 THR n 1 120 VAL n 1 121 GLU n 1 122 GLU n 1 123 LYS n 1 124 VAL n 1 125 ARG n 1 126 LEU n 1 127 LEU n 1 128 GLY n 1 129 LEU n 1 130 GLY n 1 131 ALA n 1 132 ASP n 1 133 ASP n 1 134 TYR n 1 135 LEU n 1 136 ILE n 1 137 LYS n 1 138 PRO n 1 139 PHE n 1 140 HIS n 1 141 PRO n 1 142 ASP n 1 143 GLU n 1 144 LEU n 1 145 LEU n 1 146 ALA n 1 147 ARG n 1 148 VAL n 1 149 LYS n 1 150 VAL n 1 151 GLN n 1 152 LEU n 1 153 ARG n 1 154 GLN n 1 155 ARG n 1 156 THR n 1 157 SER n 1 158 GLU n 1 159 SER n 1 160 LEU n 1 161 SER n 1 162 MSE n 1 163 GLY n 1 164 ASP n 1 165 LEU n 1 166 THR n 1 167 LEU n 1 168 ASP n 1 169 PRO n 1 170 GLN n 1 171 LYS n 1 172 ARG n 1 173 LEU n 1 174 VAL n 1 175 THR n 1 176 TYR n 1 177 LYS n 1 178 GLY n 1 179 GLU n 1 180 GLU n 1 181 LEU n 1 182 ARG n 1 183 LEU n 1 184 SER n 1 185 PRO n 1 186 LYS n 1 187 GLU n 1 188 PHE n 1 189 ASP n 1 190 ILE n 1 191 LEU n 1 192 ALA n 1 193 LEU n 1 194 LEU n 1 195 ILE n 1 196 ARG n 1 197 GLN n 1 198 PRO n 1 199 GLY n 1 200 ARG n 1 201 VAL n 1 202 TYR n 1 203 SER n 1 204 ARG n 1 205 GLN n 1 206 GLU n 1 207 ILE n 1 208 GLY n 1 209 GLN n 1 210 GLU n 1 211 ILE n 1 212 TRP n 1 213 GLN n 1 214 GLY n 1 215 ARG n 1 216 LEU n 1 217 PRO n 1 218 GLU n 1 219 GLY n 1 220 SER n 1 221 ASN n 1 222 VAL n 1 223 VAL n 1 224 ASP n 1 225 VAL n 1 226 HIS n 1 227 MSE n 1 228 ALA n 1 229 ASN n 1 230 LEU n 1 231 ARG n 1 232 ALA n 1 233 LYS n 1 234 LEU n 1 235 ARG n 1 236 ASP n 1 237 LEU n 1 238 ASP n 1 239 GLY n 1 240 TYR n 1 241 GLY n 1 242 LEU n 1 243 LEU n 1 244 ARG n 1 245 THR n 1 246 VAL n 1 247 ARG n 1 248 GLY n 1 249 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DR_2418 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Deinococcus radiodurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1299 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9RRR8_DEIRA _struct_ref.pdbx_db_accession Q9RRR8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNEQRILVIEDDHDIANVLRMDLTDAGYVVDHADSAMNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVL TARDTVEEKVRLLGLGADDYLIKPFHPDELLARVKVQLRQRTSESLSMGDLTLDPQKRLVTYKGEELRLSPKEFDILALL IRQPGRVYSRQEIGQEIWQGRLPEGSNVVDVHMANLRAKLRDLDGYGLLRTVRGV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3Q9S _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 35 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 249 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9RRR8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 215 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 215 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3Q9S MSE A 1 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -33 1 1 3Q9S GLY A 2 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -32 2 1 3Q9S SER A 3 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -31 3 1 3Q9S SER A 4 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -30 4 1 3Q9S HIS A 5 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -29 5 1 3Q9S HIS A 6 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -28 6 1 3Q9S HIS A 7 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -27 7 1 3Q9S HIS A 8 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -26 8 1 3Q9S HIS A 9 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -25 9 1 3Q9S HIS A 10 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -24 10 1 3Q9S SER A 11 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -23 11 1 3Q9S SER A 12 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -22 12 1 3Q9S GLY A 13 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -21 13 1 3Q9S GLU A 14 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -20 14 1 3Q9S ASN A 15 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -19 15 1 3Q9S LEU A 16 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -18 16 1 3Q9S TYR A 17 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -17 17 1 3Q9S PHE A 18 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -16 18 1 3Q9S GLU A 19 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -15 19 1 3Q9S GLY A 20 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -14 20 1 3Q9S SER A 21 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -13 21 1 3Q9S HIS A 22 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -12 22 1 3Q9S MSE A 23 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -11 23 1 3Q9S ALA A 24 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -10 24 1 3Q9S SER A 25 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -9 25 1 3Q9S MSE A 26 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -8 26 1 3Q9S THR A 27 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -7 27 1 3Q9S GLY A 28 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -6 28 1 3Q9S GLY A 29 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -5 29 1 3Q9S GLN A 30 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -4 30 1 3Q9S GLN A 31 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -3 31 1 3Q9S MSE A 32 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -2 32 1 3Q9S GLY A 33 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' -1 33 1 3Q9S ARG A 34 ? UNP Q9RRR8 ? ? 'EXPRESSION TAG' 0 34 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3Q9S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_percent_sol 54.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1M HEPES, 14% PEG4000, 16% 2-propanol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-03-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9793 # _reflns.entry_id 3Q9S _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.30 _reflns.number_obs 13149 _reflns.number_all 13487 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 48.400 _reflns.pdbx_redundancy 6.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.34 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.435 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 661 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3Q9S _refine.ls_number_reflns_obs 11243 _refine.ls_number_reflns_all 11243 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.92 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.255 _refine.ls_d_res_high 2.400 _refine.ls_percent_reflns_obs 97.33 _refine.ls_R_factor_obs 0.2100 _refine.ls_R_factor_all 0.2100 _refine.ls_R_factor_R_work 0.2073 _refine.ls_R_factor_R_free 0.2632 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.88 _refine.ls_number_reflns_R_free 1097 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 59.2931 _refine.aniso_B[1][1] 4.5899 _refine.aniso_B[2][2] 4.5899 _refine.aniso_B[3][3] -9.1798 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.393 _refine.solvent_model_param_bsol 75.763 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.32 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1668 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 52 _refine_hist.number_atoms_total 1720 _refine_hist.d_res_high 2.400 _refine_hist.d_res_low 32.255 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 ? ? 1706 'X-RAY DIFFRACTION' ? f_angle_d 0.847 ? ? 2310 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.218 ? ? 664 'X-RAY DIFFRACTION' ? f_chiral_restr 0.054 ? ? 267 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 305 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.4001 2.5093 8 99.0000 2722 . 0.2509 0.2978 . 126 . 2848 . 'X-RAY DIFFRACTION' . 2.5093 2.6415 8 99.0000 2702 . 0.2306 0.3453 . 128 . 2830 . 'X-RAY DIFFRACTION' . 2.6415 2.8069 8 99.0000 2746 . 0.2272 0.2821 . 170 . 2916 . 'X-RAY DIFFRACTION' . 2.8069 3.0235 8 99.0000 2679 . 0.2036 0.2709 . 148 . 2827 . 'X-RAY DIFFRACTION' . 3.0235 3.3275 8 99.0000 2760 . 0.2103 0.2553 . 124 . 2884 . 'X-RAY DIFFRACTION' . 3.3275 3.8083 8 99.0000 2676 . 0.1880 0.2591 . 158 . 2834 . 'X-RAY DIFFRACTION' . 3.8083 4.7956 8 98.0000 2683 . 0.1565 0.2132 . 131 . 2814 . 'X-RAY DIFFRACTION' . 4.7956 32.2583 8 87.0000 2420 . 0.2195 0.2403 . 112 . 2532 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3Q9S _struct.title 'Crystal structure of rra(1-215) from Deinococcus Radiodurans' _struct.pdbx_descriptor 'DNA-binding response regulator' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3Q9S _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text 'response regulator, DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 46 ? ASP A 59 ? ASP A 12 ASP A 25 1 ? 14 HELX_P HELX_P2 2 SER A 69 ? ASP A 80 ? SER A 35 ASP A 46 1 ? 12 HELX_P HELX_P3 3 PRO A 92 ? LYS A 105 ? PRO A 58 LYS A 71 1 ? 14 HELX_P HELX_P4 4 THR A 119 ? GLY A 130 ? THR A 85 GLY A 96 1 ? 12 HELX_P HELX_P5 5 HIS A 140 ? ARG A 153 ? HIS A 106 ARG A 119 1 ? 14 HELX_P HELX_P6 6 SER A 184 ? GLN A 197 ? SER A 150 GLN A 163 1 ? 14 HELX_P HELX_P7 7 SER A 203 ? GLN A 213 ? SER A 169 GLN A 179 1 ? 11 HELX_P HELX_P8 8 ASN A 221 ? ARG A 235 ? ASN A 187 ARG A 201 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ARG 54 C ? ? ? 1_555 A MSE 55 N ? ? A ARG 20 A MSE 21 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 55 C ? ? ? 1_555 A ASP 56 N ? ? A MSE 21 A ASP 22 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A ALA 70 C ? ? ? 1_555 A MSE 71 N ? ? A ALA 36 A MSE 37 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale ? ? A MSE 71 C ? ? ? 1_555 A ASN 72 N ? ? A MSE 37 A ASN 38 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A SER 161 C ? ? ? 1_555 A MSE 162 N ? ? A SER 127 A MSE 128 1_555 ? ? ? ? ? ? ? 1.323 ? covale6 covale ? ? A MSE 162 C ? ? ? 1_555 A GLY 163 N ? ? A MSE 128 A GLY 129 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? A HIS 226 C ? ? ? 1_555 A MSE 227 N ? ? A HIS 192 A MSE 193 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A MSE 227 C ? ? ? 1_555 A ALA 228 N ? ? A MSE 193 A ALA 194 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 137 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 103 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 138 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 104 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 63 ? ALA A 67 ? VAL A 29 ALA A 33 A 2 ARG A 39 ? ILE A 43 ? ARG A 5 ILE A 9 A 3 LEU A 84 ? ASP A 88 ? LEU A 50 ASP A 54 A 4 ILE A 111 ? THR A 115 ? ILE A 77 THR A 81 A 5 ASP A 133 ? ILE A 136 ? ASP A 99 ILE A 102 B 1 LEU A 160 ? MSE A 162 ? LEU A 126 MSE A 128 B 2 LEU A 165 ? ASP A 168 ? LEU A 131 ASP A 134 B 3 LEU A 173 ? TYR A 176 ? LEU A 139 TYR A 142 B 4 GLU A 179 ? LEU A 181 ? GLU A 145 LEU A 147 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASP A 65 ? O ASP A 31 N VAL A 42 ? N VAL A 8 A 2 3 N ILE A 43 ? N ILE A 9 O LEU A 86 ? O LEU A 52 A 3 4 N LEU A 87 ? N LEU A 53 O LEU A 114 ? O LEU A 80 A 4 5 N VAL A 113 ? N VAL A 79 O LEU A 135 ? O LEU A 101 B 1 2 N LEU A 160 ? N LEU A 126 O LEU A 167 ? O LEU A 133 B 2 3 N ASP A 168 ? N ASP A 134 O LEU A 173 ? O LEU A 139 B 3 4 N VAL A 174 ? N VAL A 140 O LEU A 181 ? O LEU A 147 # _database_PDB_matrix.entry_id 3Q9S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3Q9S _atom_sites.fract_transf_matrix[1][1] 0.010148 _atom_sites.fract_transf_matrix[1][2] 0.005859 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011718 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018366 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -33 ? ? ? A . n A 1 2 GLY 2 -32 ? ? ? A . n A 1 3 SER 3 -31 ? ? ? A . n A 1 4 SER 4 -30 ? ? ? A . n A 1 5 HIS 5 -29 ? ? ? A . n A 1 6 HIS 6 -28 ? ? ? A . n A 1 7 HIS 7 -27 ? ? ? A . n A 1 8 HIS 8 -26 ? ? ? A . n A 1 9 HIS 9 -25 ? ? ? A . n A 1 10 HIS 10 -24 ? ? ? A . n A 1 11 SER 11 -23 ? ? ? A . n A 1 12 SER 12 -22 ? ? ? A . n A 1 13 GLY 13 -21 ? ? ? A . n A 1 14 GLU 14 -20 ? ? ? A . n A 1 15 ASN 15 -19 ? ? ? A . n A 1 16 LEU 16 -18 ? ? ? A . n A 1 17 TYR 17 -17 ? ? ? A . n A 1 18 PHE 18 -16 ? ? ? A . n A 1 19 GLU 19 -15 ? ? ? A . n A 1 20 GLY 20 -14 ? ? ? A . n A 1 21 SER 21 -13 ? ? ? A . n A 1 22 HIS 22 -12 ? ? ? A . n A 1 23 MSE 23 -11 ? ? ? A . n A 1 24 ALA 24 -10 ? ? ? A . n A 1 25 SER 25 -9 ? ? ? A . n A 1 26 MSE 26 -8 ? ? ? A . n A 1 27 THR 27 -7 ? ? ? A . n A 1 28 GLY 28 -6 ? ? ? A . n A 1 29 GLY 29 -5 ? ? ? A . n A 1 30 GLN 30 -4 ? ? ? A . n A 1 31 GLN 31 -3 ? ? ? A . n A 1 32 MSE 32 -2 ? ? ? A . n A 1 33 GLY 33 -1 ? ? ? A . n A 1 34 ARG 34 0 ? ? ? A . n A 1 35 MSE 35 1 ? ? ? A . n A 1 36 ASN 36 2 ? ? ? A . n A 1 37 GLU 37 3 3 GLU GLU A . n A 1 38 GLN 38 4 4 GLN GLN A . n A 1 39 ARG 39 5 5 ARG ARG A . n A 1 40 ILE 40 6 6 ILE ILE A . n A 1 41 LEU 41 7 7 LEU LEU A . n A 1 42 VAL 42 8 8 VAL VAL A . n A 1 43 ILE 43 9 9 ILE ILE A . n A 1 44 GLU 44 10 10 GLU GLU A . n A 1 45 ASP 45 11 11 ASP ASP A . n A 1 46 ASP 46 12 12 ASP ASP A . n A 1 47 HIS 47 13 13 HIS HIS A . n A 1 48 ASP 48 14 14 ASP ASP A . n A 1 49 ILE 49 15 15 ILE ILE A . n A 1 50 ALA 50 16 16 ALA ALA A . n A 1 51 ASN 51 17 17 ASN ASN A . n A 1 52 VAL 52 18 18 VAL VAL A . n A 1 53 LEU 53 19 19 LEU LEU A . n A 1 54 ARG 54 20 20 ARG ARG A . n A 1 55 MSE 55 21 21 MSE MSE A . n A 1 56 ASP 56 22 22 ASP ASP A . n A 1 57 LEU 57 23 23 LEU LEU A . n A 1 58 THR 58 24 24 THR THR A . n A 1 59 ASP 59 25 25 ASP ASP A . n A 1 60 ALA 60 26 26 ALA ALA A . n A 1 61 GLY 61 27 27 GLY GLY A . n A 1 62 TYR 62 28 28 TYR TYR A . n A 1 63 VAL 63 29 29 VAL VAL A . n A 1 64 VAL 64 30 30 VAL VAL A . n A 1 65 ASP 65 31 31 ASP ASP A . n A 1 66 HIS 66 32 32 HIS HIS A . n A 1 67 ALA 67 33 33 ALA ALA A . n A 1 68 ASP 68 34 34 ASP ASP A . n A 1 69 SER 69 35 35 SER SER A . n A 1 70 ALA 70 36 36 ALA ALA A . n A 1 71 MSE 71 37 37 MSE MSE A . n A 1 72 ASN 72 38 38 ASN ASN A . n A 1 73 GLY 73 39 39 GLY GLY A . n A 1 74 LEU 74 40 40 LEU LEU A . n A 1 75 ILE 75 41 41 ILE ILE A . n A 1 76 LYS 76 42 42 LYS LYS A . n A 1 77 ALA 77 43 43 ALA ALA A . n A 1 78 ARG 78 44 44 ARG ARG A . n A 1 79 GLU 79 45 45 GLU GLU A . n A 1 80 ASP 80 46 46 ASP ASP A . n A 1 81 HIS 81 47 47 HIS HIS A . n A 1 82 PRO 82 48 48 PRO PRO A . n A 1 83 ASP 83 49 49 ASP ASP A . n A 1 84 LEU 84 50 50 LEU LEU A . n A 1 85 ILE 85 51 51 ILE ILE A . n A 1 86 LEU 86 52 52 LEU LEU A . n A 1 87 LEU 87 53 53 LEU LEU A . n A 1 88 ASP 88 54 54 ASP ASP A . n A 1 89 LEU 89 55 55 LEU LEU A . n A 1 90 GLY 90 56 56 GLY GLY A . n A 1 91 LEU 91 57 57 LEU LEU A . n A 1 92 PRO 92 58 58 PRO PRO A . n A 1 93 ASP 93 59 59 ASP ASP A . n A 1 94 PHE 94 60 60 PHE PHE A . n A 1 95 ASP 95 61 61 ASP ASP A . n A 1 96 GLY 96 62 62 GLY GLY A . n A 1 97 GLY 97 63 63 GLY GLY A . n A 1 98 ASP 98 64 64 ASP ASP A . n A 1 99 VAL 99 65 65 VAL VAL A . n A 1 100 VAL 100 66 66 VAL VAL A . n A 1 101 GLN 101 67 67 GLN GLN A . n A 1 102 ARG 102 68 68 ARG ARG A . n A 1 103 LEU 103 69 69 LEU LEU A . n A 1 104 ARG 104 70 70 ARG ARG A . n A 1 105 LYS 105 71 71 LYS LYS A . n A 1 106 ASN 106 72 72 ASN ASN A . n A 1 107 SER 107 73 73 SER SER A . n A 1 108 ALA 108 74 74 ALA ALA A . n A 1 109 LEU 109 75 75 LEU LEU A . n A 1 110 PRO 110 76 76 PRO PRO A . n A 1 111 ILE 111 77 77 ILE ILE A . n A 1 112 ILE 112 78 78 ILE ILE A . n A 1 113 VAL 113 79 79 VAL VAL A . n A 1 114 LEU 114 80 80 LEU LEU A . n A 1 115 THR 115 81 81 THR THR A . n A 1 116 ALA 116 82 82 ALA ALA A . n A 1 117 ARG 117 83 83 ARG ARG A . n A 1 118 ASP 118 84 84 ASP ASP A . n A 1 119 THR 119 85 85 THR THR A . n A 1 120 VAL 120 86 86 VAL VAL A . n A 1 121 GLU 121 87 87 GLU GLU A . n A 1 122 GLU 122 88 88 GLU GLU A . n A 1 123 LYS 123 89 89 LYS LYS A . n A 1 124 VAL 124 90 90 VAL VAL A . n A 1 125 ARG 125 91 91 ARG ARG A . n A 1 126 LEU 126 92 92 LEU LEU A . n A 1 127 LEU 127 93 93 LEU LEU A . n A 1 128 GLY 128 94 94 GLY GLY A . n A 1 129 LEU 129 95 95 LEU LEU A . n A 1 130 GLY 130 96 96 GLY GLY A . n A 1 131 ALA 131 97 97 ALA ALA A . n A 1 132 ASP 132 98 98 ASP ASP A . n A 1 133 ASP 133 99 99 ASP ASP A . n A 1 134 TYR 134 100 100 TYR TYR A . n A 1 135 LEU 135 101 101 LEU LEU A . n A 1 136 ILE 136 102 102 ILE ILE A . n A 1 137 LYS 137 103 103 LYS LYS A . n A 1 138 PRO 138 104 104 PRO PRO A . n A 1 139 PHE 139 105 105 PHE PHE A . n A 1 140 HIS 140 106 106 HIS HIS A . n A 1 141 PRO 141 107 107 PRO PRO A . n A 1 142 ASP 142 108 108 ASP ASP A . n A 1 143 GLU 143 109 109 GLU GLU A . n A 1 144 LEU 144 110 110 LEU LEU A . n A 1 145 LEU 145 111 111 LEU LEU A . n A 1 146 ALA 146 112 112 ALA ALA A . n A 1 147 ARG 147 113 113 ARG ARG A . n A 1 148 VAL 148 114 114 VAL VAL A . n A 1 149 LYS 149 115 115 LYS LYS A . n A 1 150 VAL 150 116 116 VAL VAL A . n A 1 151 GLN 151 117 117 GLN GLN A . n A 1 152 LEU 152 118 118 LEU LEU A . n A 1 153 ARG 153 119 119 ARG ARG A . n A 1 154 GLN 154 120 120 GLN GLN A . n A 1 155 ARG 155 121 121 ARG ARG A . n A 1 156 THR 156 122 122 THR THR A . n A 1 157 SER 157 123 123 SER SER A . n A 1 158 GLU 158 124 124 GLU GLU A . n A 1 159 SER 159 125 125 SER SER A . n A 1 160 LEU 160 126 126 LEU LEU A . n A 1 161 SER 161 127 127 SER SER A . n A 1 162 MSE 162 128 128 MSE MSE A . n A 1 163 GLY 163 129 129 GLY GLY A . n A 1 164 ASP 164 130 130 ASP ASP A . n A 1 165 LEU 165 131 131 LEU LEU A . n A 1 166 THR 166 132 132 THR THR A . n A 1 167 LEU 167 133 133 LEU LEU A . n A 1 168 ASP 168 134 134 ASP ASP A . n A 1 169 PRO 169 135 135 PRO PRO A . n A 1 170 GLN 170 136 136 GLN GLN A . n A 1 171 LYS 171 137 137 LYS LYS A . n A 1 172 ARG 172 138 138 ARG ARG A . n A 1 173 LEU 173 139 139 LEU LEU A . n A 1 174 VAL 174 140 140 VAL VAL A . n A 1 175 THR 175 141 141 THR THR A . n A 1 176 TYR 176 142 142 TYR TYR A . n A 1 177 LYS 177 143 143 LYS LYS A . n A 1 178 GLY 178 144 144 GLY GLY A . n A 1 179 GLU 179 145 145 GLU GLU A . n A 1 180 GLU 180 146 146 GLU GLU A . n A 1 181 LEU 181 147 147 LEU LEU A . n A 1 182 ARG 182 148 148 ARG ARG A . n A 1 183 LEU 183 149 149 LEU LEU A . n A 1 184 SER 184 150 150 SER SER A . n A 1 185 PRO 185 151 151 PRO PRO A . n A 1 186 LYS 186 152 152 LYS LYS A . n A 1 187 GLU 187 153 153 GLU GLU A . n A 1 188 PHE 188 154 154 PHE PHE A . n A 1 189 ASP 189 155 155 ASP ASP A . n A 1 190 ILE 190 156 156 ILE ILE A . n A 1 191 LEU 191 157 157 LEU LEU A . n A 1 192 ALA 192 158 158 ALA ALA A . n A 1 193 LEU 193 159 159 LEU LEU A . n A 1 194 LEU 194 160 160 LEU LEU A . n A 1 195 ILE 195 161 161 ILE ILE A . n A 1 196 ARG 196 162 162 ARG ARG A . n A 1 197 GLN 197 163 163 GLN GLN A . n A 1 198 PRO 198 164 164 PRO PRO A . n A 1 199 GLY 199 165 165 GLY GLY A . n A 1 200 ARG 200 166 166 ARG ARG A . n A 1 201 VAL 201 167 167 VAL VAL A . n A 1 202 TYR 202 168 168 TYR TYR A . n A 1 203 SER 203 169 169 SER SER A . n A 1 204 ARG 204 170 170 ARG ARG A . n A 1 205 GLN 205 171 171 GLN GLN A . n A 1 206 GLU 206 172 172 GLU GLU A . n A 1 207 ILE 207 173 173 ILE ILE A . n A 1 208 GLY 208 174 174 GLY GLY A . n A 1 209 GLN 209 175 175 GLN GLN A . n A 1 210 GLU 210 176 176 GLU GLU A . n A 1 211 ILE 211 177 177 ILE ILE A . n A 1 212 TRP 212 178 178 TRP TRP A . n A 1 213 GLN 213 179 179 GLN GLN A . n A 1 214 GLY 214 180 180 GLY GLY A . n A 1 215 ARG 215 181 181 ARG ARG A . n A 1 216 LEU 216 182 182 LEU LEU A . n A 1 217 PRO 217 183 183 PRO PRO A . n A 1 218 GLU 218 184 184 GLU GLU A . n A 1 219 GLY 219 185 185 GLY GLY A . n A 1 220 SER 220 186 186 SER SER A . n A 1 221 ASN 221 187 187 ASN ASN A . n A 1 222 VAL 222 188 188 VAL VAL A . n A 1 223 VAL 223 189 189 VAL VAL A . n A 1 224 ASP 224 190 190 ASP ASP A . n A 1 225 VAL 225 191 191 VAL VAL A . n A 1 226 HIS 226 192 192 HIS HIS A . n A 1 227 MSE 227 193 193 MSE MSE A . n A 1 228 ALA 228 194 194 ALA ALA A . n A 1 229 ASN 229 195 195 ASN ASN A . n A 1 230 LEU 230 196 196 LEU LEU A . n A 1 231 ARG 231 197 197 ARG ARG A . n A 1 232 ALA 232 198 198 ALA ALA A . n A 1 233 LYS 233 199 199 LYS LYS A . n A 1 234 LEU 234 200 200 LEU LEU A . n A 1 235 ARG 235 201 201 ARG ARG A . n A 1 236 ASP 236 202 202 ASP ASP A . n A 1 237 LEU 237 203 203 LEU LEU A . n A 1 238 ASP 238 204 204 ASP ASP A . n A 1 239 GLY 239 205 205 GLY GLY A . n A 1 240 TYR 240 206 206 TYR TYR A . n A 1 241 GLY 241 207 207 GLY GLY A . n A 1 242 LEU 242 208 208 LEU LEU A . n A 1 243 LEU 243 209 209 LEU LEU A . n A 1 244 ARG 244 210 210 ARG ARG A . n A 1 245 THR 245 211 211 THR THR A . n A 1 246 VAL 246 212 212 VAL VAL A . n A 1 247 ARG 247 213 ? ? ? A . n A 1 248 GLY 248 214 ? ? ? A . n A 1 249 VAL 249 215 ? ? ? A . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 55 A MSE 21 ? MET SELENOMETHIONINE 2 A MSE 71 A MSE 37 ? MET SELENOMETHIONINE 3 A MSE 162 A MSE 128 ? MET SELENOMETHIONINE 4 A MSE 227 A MSE 193 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-01-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -10.5948 _pdbx_refine_tls.origin_y 39.7752 _pdbx_refine_tls.origin_z 7.3060 _pdbx_refine_tls.T[1][1] 0.2113 _pdbx_refine_tls.T[2][2] 0.2756 _pdbx_refine_tls.T[3][3] 0.3471 _pdbx_refine_tls.T[1][2] 0.0063 _pdbx_refine_tls.T[1][3] 0.0186 _pdbx_refine_tls.T[2][3] -0.0038 _pdbx_refine_tls.L[1][1] 1.9072 _pdbx_refine_tls.L[2][2] 3.0531 _pdbx_refine_tls.L[3][3] 0.9148 _pdbx_refine_tls.L[1][2] 0.8785 _pdbx_refine_tls.L[1][3] -0.2607 _pdbx_refine_tls.L[2][3] -1.6625 _pdbx_refine_tls.S[1][1] 0.0407 _pdbx_refine_tls.S[2][2] -0.0197 _pdbx_refine_tls.S[3][3] -0.0214 _pdbx_refine_tls.S[1][2] -0.1539 _pdbx_refine_tls.S[1][3] -0.4331 _pdbx_refine_tls.S[2][3] 0.1906 _pdbx_refine_tls.S[2][1] -0.0436 _pdbx_refine_tls.S[3][1] -0.0184 _pdbx_refine_tls.S[3][2] -0.0439 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 3 A 212 all ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 216 A 267 all ? ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SOLVE phasing . ? 2 PHENIX refinement '(phenix.refine)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 71 ? ? -38.45 106.65 2 1 ASN A 72 ? ? 37.40 44.42 3 1 ARG A 121 ? ? -58.62 -166.27 4 1 THR A 122 ? ? -139.44 -112.73 5 1 SER A 123 ? ? -58.45 179.27 6 1 PRO A 135 ? ? -74.39 27.58 7 1 GLN A 136 ? ? -128.05 -57.34 8 1 ARG A 201 ? ? -32.90 132.50 9 1 ARG A 210 ? ? 16.29 123.06 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -33 ? A MSE 1 2 1 Y 1 A GLY -32 ? A GLY 2 3 1 Y 1 A SER -31 ? A SER 3 4 1 Y 1 A SER -30 ? A SER 4 5 1 Y 1 A HIS -29 ? A HIS 5 6 1 Y 1 A HIS -28 ? A HIS 6 7 1 Y 1 A HIS -27 ? A HIS 7 8 1 Y 1 A HIS -26 ? A HIS 8 9 1 Y 1 A HIS -25 ? A HIS 9 10 1 Y 1 A HIS -24 ? A HIS 10 11 1 Y 1 A SER -23 ? A SER 11 12 1 Y 1 A SER -22 ? A SER 12 13 1 Y 1 A GLY -21 ? A GLY 13 14 1 Y 1 A GLU -20 ? A GLU 14 15 1 Y 1 A ASN -19 ? A ASN 15 16 1 Y 1 A LEU -18 ? A LEU 16 17 1 Y 1 A TYR -17 ? A TYR 17 18 1 Y 1 A PHE -16 ? A PHE 18 19 1 Y 1 A GLU -15 ? A GLU 19 20 1 Y 1 A GLY -14 ? A GLY 20 21 1 Y 1 A SER -13 ? A SER 21 22 1 Y 1 A HIS -12 ? A HIS 22 23 1 Y 1 A MSE -11 ? A MSE 23 24 1 Y 1 A ALA -10 ? A ALA 24 25 1 Y 1 A SER -9 ? A SER 25 26 1 Y 1 A MSE -8 ? A MSE 26 27 1 Y 1 A THR -7 ? A THR 27 28 1 Y 1 A GLY -6 ? A GLY 28 29 1 Y 1 A GLY -5 ? A GLY 29 30 1 Y 1 A GLN -4 ? A GLN 30 31 1 Y 1 A GLN -3 ? A GLN 31 32 1 Y 1 A MSE -2 ? A MSE 32 33 1 Y 1 A GLY -1 ? A GLY 33 34 1 Y 1 A ARG 0 ? A ARG 34 35 1 Y 1 A MSE 1 ? A MSE 35 36 1 Y 1 A ASN 2 ? A ASN 36 37 1 Y 1 A ARG 213 ? A ARG 247 38 1 Y 1 A GLY 214 ? A GLY 248 39 1 Y 1 A VAL 215 ? A VAL 249 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 216 1 HOH HOH A . B 2 HOH 2 217 2 HOH HOH A . B 2 HOH 3 218 3 HOH HOH A . B 2 HOH 4 219 4 HOH HOH A . B 2 HOH 5 220 5 HOH HOH A . B 2 HOH 6 221 6 HOH HOH A . B 2 HOH 7 222 7 HOH HOH A . B 2 HOH 8 223 8 HOH HOH A . B 2 HOH 9 224 9 HOH HOH A . B 2 HOH 10 225 10 HOH HOH A . B 2 HOH 11 226 11 HOH HOH A . B 2 HOH 12 227 12 HOH HOH A . B 2 HOH 13 228 13 HOH HOH A . B 2 HOH 14 229 14 HOH HOH A . B 2 HOH 15 230 15 HOH HOH A . B 2 HOH 16 231 16 HOH HOH A . B 2 HOH 17 232 17 HOH HOH A . B 2 HOH 18 233 18 HOH HOH A . B 2 HOH 19 234 19 HOH HOH A . B 2 HOH 20 235 20 HOH HOH A . B 2 HOH 21 236 21 HOH HOH A . B 2 HOH 22 237 22 HOH HOH A . B 2 HOH 23 238 23 HOH HOH A . B 2 HOH 24 239 24 HOH HOH A . B 2 HOH 25 240 25 HOH HOH A . B 2 HOH 26 241 26 HOH HOH A . B 2 HOH 27 242 27 HOH HOH A . B 2 HOH 28 243 28 HOH HOH A . B 2 HOH 29 244 29 HOH HOH A . B 2 HOH 30 245 30 HOH HOH A . B 2 HOH 31 246 31 HOH HOH A . B 2 HOH 32 247 32 HOH HOH A . B 2 HOH 33 248 33 HOH HOH A . B 2 HOH 34 249 34 HOH HOH A . B 2 HOH 35 250 35 HOH HOH A . B 2 HOH 36 251 36 HOH HOH A . B 2 HOH 37 252 37 HOH HOH A . B 2 HOH 38 253 38 HOH HOH A . B 2 HOH 39 254 39 HOH HOH A . B 2 HOH 40 255 40 HOH HOH A . B 2 HOH 41 256 41 HOH HOH A . B 2 HOH 42 257 42 HOH HOH A . B 2 HOH 43 258 43 HOH HOH A . B 2 HOH 44 259 44 HOH HOH A . B 2 HOH 45 260 45 HOH HOH A . B 2 HOH 46 261 46 HOH HOH A . B 2 HOH 47 262 47 HOH HOH A . B 2 HOH 48 263 48 HOH HOH A . B 2 HOH 49 264 49 HOH HOH A . B 2 HOH 50 265 50 HOH HOH A . B 2 HOH 51 266 51 HOH HOH A . B 2 HOH 52 267 52 HOH HOH A . #