HEADER TRANSFERASE 11-JAN-11 3QAT TITLE CRYSTAL STRUCTURE OF ACYL-CARRIER-PROTEIN-S-MALONYLTRANSFERASE FROM TITLE 2 BARTONELLA HENSELAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.3.1.39; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA HENSELAE; SOURCE 3 ORGANISM_COMMON: ROCHALIMAEA HENSELAE; SOURCE 4 ORGANISM_TAXID: 283166; SOURCE 5 STRAIN: HOUSTON-1; SOURCE 6 GENE: BH05340, FABD; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, KEYWDS 2 BARTONELLA, CAT-SCRATCH DISEASE, ALPHA PROTEOBACTERIA, KEYWDS 3 MALONYLTRANSFERASE, MALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE, KEYWDS 4 ROCHALIMAEA HENSELAE, FATTY ACID BIOSYNTHESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 13-SEP-23 3QAT 1 REMARK SEQADV REVDAT 1 26-JAN-11 3QAT 0 JRNL AUTH T.E.EDWARDS,M.C.CLIFTON,B.SANKARAN, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 ACYL-CARRIER-PROTEIN-S-MALONYLTRANSFERASE FROM BARTONELLA JRNL TITL 3 HENSELAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 89375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4475 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5500 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 271 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4546 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 811 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.64 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.47000 REMARK 3 B33 (A**2) : 0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.076 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.043 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.707 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4755 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6493 ; 1.374 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 671 ; 5.406 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;32.556 ;25.111 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 808 ;11.857 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;16.983 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 805 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3532 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3176 ; 0.715 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5102 ; 1.264 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1579 ; 2.167 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1370 ; 3.642 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 37.7090 42.3243 20.7130 REMARK 3 T TENSOR REMARK 3 T11: 0.0102 T22: 0.0135 REMARK 3 T33: 0.0052 T12: 0.0058 REMARK 3 T13: -0.0018 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.3743 L22: 1.1622 REMARK 3 L33: 0.1952 L12: 0.0374 REMARK 3 L13: 0.0465 L23: -0.0983 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: 0.0072 S13: 0.0083 REMARK 3 S21: -0.0675 S22: -0.0130 S23: 0.0193 REMARK 3 S31: 0.0129 S32: 0.0115 S33: -0.0260 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 36.5222 52.5962 49.9245 REMARK 3 T TENSOR REMARK 3 T11: 0.0150 T22: 0.0192 REMARK 3 T33: 0.0112 T12: -0.0014 REMARK 3 T13: 0.0061 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.4303 L22: 0.6015 REMARK 3 L33: 0.3331 L12: -0.1331 REMARK 3 L13: 0.0236 L23: 0.0660 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: -0.0150 S13: -0.0124 REMARK 3 S21: 0.0528 S22: 0.0046 S23: 0.0157 REMARK 3 S31: 0.0093 S32: 0.0008 S33: -0.0133 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3QAT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063410. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89635 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.2400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.46000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: 3EZO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BAHEA.00141.A.A1 PS00852 AT 21.8 MG/ML REMARK 280 AGAINST JCSG+ SCREEN CONDITION A5, 0.2 M MAGNESIUM FORMATE, 20% REMARK 280 PEG 3350 WITH 25% EG AS CRYO-PROTECTANT, CRYSTAL TRACKING ID REMARK 280 218778A5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K, PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.09500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.09000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.00500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.09000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.09500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.00500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 GLU A 150 CG CD OE1 OE2 REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 GLU A 155 CG CD OE1 OE2 REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LYS A 215 CG CD CE NZ REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 LYS A 295 CG CD CE NZ REMARK 470 LYS B 143 CG CD CE NZ REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 GLU B 154 CG CD OE1 OE2 REMARK 470 GLU B 155 CG CD OE1 OE2 REMARK 470 LYS B 176 CG CD CE NZ REMARK 470 GLU B 183 CG CD OE1 OE2 REMARK 470 LYS B 191 CG CD CE NZ REMARK 470 LYS B 292 CG CD CE NZ REMARK 470 LYS B 295 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 207 CG - SD - CE ANGL. DEV. = -12.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 94 -98.31 60.61 REMARK 500 SER B 94 -100.35 62.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 316 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BAHEA.00141.A RELATED DB: TARGETDB DBREF 3QAT A 1 314 UNP Q6G444 Q6G444_BARHE 1 314 DBREF 3QAT B 1 314 UNP Q6G444 Q6G444_BARHE 1 314 SEQADV 3QAT GLY A -3 UNP Q6G444 EXPRESSION TAG SEQADV 3QAT PRO A -2 UNP Q6G444 EXPRESSION TAG SEQADV 3QAT GLY A -1 UNP Q6G444 EXPRESSION TAG SEQADV 3QAT SER A 0 UNP Q6G444 EXPRESSION TAG SEQADV 3QAT GLY B -3 UNP Q6G444 EXPRESSION TAG SEQADV 3QAT PRO B -2 UNP Q6G444 EXPRESSION TAG SEQADV 3QAT GLY B -1 UNP Q6G444 EXPRESSION TAG SEQADV 3QAT SER B 0 UNP Q6G444 EXPRESSION TAG SEQRES 1 A 318 GLY PRO GLY SER MET GLY ALA ALA PHE THR PHE PRO GLY SEQRES 2 A 318 GLN GLY SER GLN LEU ILE GLY MET GLY LYS VAL LEU THR SEQRES 3 A 318 GLU GLN PHE VAL ALA ALA ARG MET VAL PHE GLU GLU VAL SEQRES 4 A 318 ASP ASP ALA LEU SER GLU LYS LEU SER ASP ILE ILE PHE SEQRES 5 A 318 GLU GLY PRO ALA ASP VAL LEU THR LEU THR ALA ASN ALA SEQRES 6 A 318 GLN PRO ALA LEU MET ALA VAL SER MET ALA VAL ILE ARG SEQRES 7 A 318 VAL MET GLU GLN LEU GLY LEU ASN VAL GLU LYS LYS VAL SEQRES 8 A 318 LYS PHE VAL ALA GLY HIS SER LEU GLY GLU TYR SER ALA SEQRES 9 A 318 LEU CYS ALA ALA GLY THR PHE SER LEU THR ASP THR ALA SEQRES 10 A 318 ARG LEU LEU ARG ILE ARG GLY ASN ALA MET GLN ALA ALA SEQRES 11 A 318 VAL ALA VAL GLY GLU GLY SER MET ALA ALA LEU ILE GLY SEQRES 12 A 318 LEU ASP GLU LYS ASP VAL GLU GLU ILE CYS GLU ILE VAL SEQRES 13 A 318 ALA GLU GLU GLY LEU CYS GLN ILE ALA ASN ASP ASN GLY SEQRES 14 A 318 GLY GLY GLN ILE VAL ILE SER GLY GLU ALA LYS ALA VAL SEQRES 15 A 318 GLU THR ALA VAL GLU VAL ALA SER GLN LYS GLY ALA LYS SEQRES 16 A 318 ARG ALA VAL LEU LEU PRO VAL SER ALA PRO PHE HIS SER SEQRES 17 A 318 ALA LEU MET GLN PRO ALA ALA ASN ALA MET LYS ASN ALA SEQRES 18 A 318 LEU LEU THR VAL ASN LYS THR ALA PRO ILE VAL PRO LEU SEQRES 19 A 318 ILE ALA ASN VAL SER VAL ILE PRO GLU SER ASP PRO GLU SEQRES 20 A 318 ARG ILE VAL SER LEU LEU VAL GLN GLN VAL THR GLY ARG SEQRES 21 A 318 VAL ARG TRP ARG GLU THR ILE GLU TRP ILE SER ALA ASN SEQRES 22 A 318 GLY VAL ASN THR LEU PHE GLU ILE GLY SER GLY LYS VAL SEQRES 23 A 318 LEU THR GLY LEU ALA ARG ARG ILE ASN LYS ASP ILE LYS SEQRES 24 A 318 ALA LEU THR VAL GLY THR ALA GLU GLU ILE GLU ALA ALA SEQRES 25 A 318 LEU ARG VAL LEU GLY VAL SEQRES 1 B 318 GLY PRO GLY SER MET GLY ALA ALA PHE THR PHE PRO GLY SEQRES 2 B 318 GLN GLY SER GLN LEU ILE GLY MET GLY LYS VAL LEU THR SEQRES 3 B 318 GLU GLN PHE VAL ALA ALA ARG MET VAL PHE GLU GLU VAL SEQRES 4 B 318 ASP ASP ALA LEU SER GLU LYS LEU SER ASP ILE ILE PHE SEQRES 5 B 318 GLU GLY PRO ALA ASP VAL LEU THR LEU THR ALA ASN ALA SEQRES 6 B 318 GLN PRO ALA LEU MET ALA VAL SER MET ALA VAL ILE ARG SEQRES 7 B 318 VAL MET GLU GLN LEU GLY LEU ASN VAL GLU LYS LYS VAL SEQRES 8 B 318 LYS PHE VAL ALA GLY HIS SER LEU GLY GLU TYR SER ALA SEQRES 9 B 318 LEU CYS ALA ALA GLY THR PHE SER LEU THR ASP THR ALA SEQRES 10 B 318 ARG LEU LEU ARG ILE ARG GLY ASN ALA MET GLN ALA ALA SEQRES 11 B 318 VAL ALA VAL GLY GLU GLY SER MET ALA ALA LEU ILE GLY SEQRES 12 B 318 LEU ASP GLU LYS ASP VAL GLU GLU ILE CYS GLU ILE VAL SEQRES 13 B 318 ALA GLU GLU GLY LEU CYS GLN ILE ALA ASN ASP ASN GLY SEQRES 14 B 318 GLY GLY GLN ILE VAL ILE SER GLY GLU ALA LYS ALA VAL SEQRES 15 B 318 GLU THR ALA VAL GLU VAL ALA SER GLN LYS GLY ALA LYS SEQRES 16 B 318 ARG ALA VAL LEU LEU PRO VAL SER ALA PRO PHE HIS SER SEQRES 17 B 318 ALA LEU MET GLN PRO ALA ALA ASN ALA MET LYS ASN ALA SEQRES 18 B 318 LEU LEU THR VAL ASN LYS THR ALA PRO ILE VAL PRO LEU SEQRES 19 B 318 ILE ALA ASN VAL SER VAL ILE PRO GLU SER ASP PRO GLU SEQRES 20 B 318 ARG ILE VAL SER LEU LEU VAL GLN GLN VAL THR GLY ARG SEQRES 21 B 318 VAL ARG TRP ARG GLU THR ILE GLU TRP ILE SER ALA ASN SEQRES 22 B 318 GLY VAL ASN THR LEU PHE GLU ILE GLY SER GLY LYS VAL SEQRES 23 B 318 LEU THR GLY LEU ALA ARG ARG ILE ASN LYS ASP ILE LYS SEQRES 24 B 318 ALA LEU THR VAL GLY THR ALA GLU GLU ILE GLU ALA ALA SEQRES 25 B 318 LEU ARG VAL LEU GLY VAL HET EDO A 315 4 HET CL A 316 1 HET EDO B 315 4 HET CL B 316 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 2(C2 H6 O2) FORMUL 4 CL 2(CL 1-) FORMUL 7 HOH *811(H2 O) HELIX 1 1 GLY A 18 PHE A 25 1 8 HELIX 2 2 PHE A 25 SER A 40 1 16 HELIX 3 3 LYS A 42 GLY A 50 1 9 HELIX 4 4 PRO A 51 LEU A 57 1 7 HELIX 5 5 LEU A 57 LEU A 79 1 23 HELIX 6 6 ASN A 82 VAL A 87 1 6 HELIX 7 7 LEU A 95 ALA A 104 1 10 HELIX 8 8 SER A 108 ALA A 126 1 19 HELIX 9 9 ASP A 141 VAL A 152 1 12 HELIX 10 10 ALA A 175 LYS A 188 1 14 HELIX 11 11 SER A 204 LEU A 206 5 3 HELIX 12 12 MET A 207 VAL A 221 1 15 HELIX 13 13 ASP A 241 GLY A 255 1 15 HELIX 14 14 TRP A 259 ASN A 269 1 11 HELIX 15 15 LYS A 281 ASN A 291 1 11 HELIX 16 16 THR A 301 GLY A 313 1 13 HELIX 17 17 GLY B 18 PHE B 25 1 8 HELIX 18 18 PHE B 25 SER B 40 1 16 HELIX 19 19 LYS B 42 GLY B 50 1 9 HELIX 20 20 PRO B 51 LEU B 57 1 7 HELIX 21 21 LEU B 57 LEU B 79 1 23 HELIX 22 22 ASN B 82 VAL B 87 1 6 HELIX 23 23 LEU B 95 ALA B 104 1 10 HELIX 24 24 SER B 108 ALA B 126 1 19 HELIX 25 25 ASP B 141 VAL B 152 1 12 HELIX 26 26 ALA B 175 LYS B 188 1 14 HELIX 27 27 SER B 204 LEU B 206 5 3 HELIX 28 28 MET B 207 VAL B 221 1 15 HELIX 29 29 ASP B 241 GLY B 255 1 15 HELIX 30 30 TRP B 259 ASN B 269 1 11 HELIX 31 31 LYS B 281 ASN B 291 1 11 HELIX 32 32 THR B 301 LEU B 312 1 12 SHEET 1 A 4 PHE A 89 GLY A 92 0 SHEET 2 A 4 GLY A 2 PHE A 7 1 N PHE A 5 O PHE A 89 SHEET 3 A 4 VAL A 271 ILE A 277 1 O PHE A 275 N THR A 6 SHEET 4 A 4 LYS A 295 VAL A 299 1 O VAL A 299 N GLU A 276 SHEET 1 B 5 ARG A 192 LEU A 196 0 SHEET 2 B 5 GLY A 132 ILE A 138 -1 N MET A 134 O LEU A 196 SHEET 3 B 5 GLN A 168 GLU A 174 -1 O ILE A 169 N LEU A 137 SHEET 4 B 5 CYS A 158 GLY A 165 -1 N GLN A 159 O SER A 172 SHEET 5 B 5 VAL A 257 ARG A 258 1 O VAL A 257 N ALA A 161 SHEET 1 C 2 LEU A 230 ILE A 231 0 SHEET 2 C 2 PRO A 238 GLU A 239 -1 O GLU A 239 N LEU A 230 SHEET 1 D 4 PHE B 89 GLY B 92 0 SHEET 2 D 4 ALA B 3 PHE B 7 1 N PHE B 5 O PHE B 89 SHEET 3 D 4 THR B 273 ILE B 277 1 O PHE B 275 N THR B 6 SHEET 4 D 4 LYS B 295 VAL B 299 1 O LYS B 295 N LEU B 274 SHEET 1 E 5 ARG B 192 LEU B 196 0 SHEET 2 E 5 GLY B 132 ILE B 138 -1 N MET B 134 O LEU B 196 SHEET 3 E 5 GLN B 168 GLU B 174 -1 O ILE B 169 N LEU B 137 SHEET 4 E 5 CYS B 158 GLY B 165 -1 N GLN B 159 O SER B 172 SHEET 5 E 5 VAL B 257 ARG B 258 1 O VAL B 257 N ALA B 161 SHEET 1 F 2 LEU B 230 ILE B 231 0 SHEET 2 F 2 PRO B 238 GLU B 239 -1 O GLU B 239 N LEU B 230 CISPEP 1 GLY A 50 PRO A 51 0 2.98 CISPEP 2 GLY B 50 PRO B 51 0 5.47 SITE 1 AC1 5 GLU A 33 SER A 44 HOH A 430 HOH A 498 SITE 2 AC1 5 HOH A 609 SITE 1 AC2 6 GLU B 33 SER B 44 HOH B 409 HOH B 453 SITE 2 AC2 6 HOH B 494 HOH B 521 SITE 1 AC3 4 HOH A 542 GLN B 10 GLY B 11 GLN B 13 SITE 1 AC4 4 GLN A 10 GLY A 11 GLN A 13 HOH A 546 CRYST1 50.190 98.010 138.180 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019924 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007237 0.00000