HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 03-FEB-11 3QLX TITLE CANDIDA GLABRATA DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND 6- TITLE 2 METHYL-5-[(3R)-3-(3,4,5-TRIMETHOXYPHENYL)PENT-1-YN-1-YL]PYRIMIDINE-2, TITLE 3 4-DIAMINE (UCP112A) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA GLABRATA; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 5478; SOURCE 5 GENE: CAGL0J03894G, DHFR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET41 KEYWDS ANTIFUNGAL AGENTS, CANDIDA GLABRATA, DRUG DESIGN, ENZYME INHIBITORS, KEYWDS 2 FUNGAL PROTEINS, MODELS, MOLECULAR STRUCTURE, STRUCTURE-ACTIVITY KEYWDS 3 RELATIONSHIP, TETRAHYDROFOLATE DEHYDROGENASE, OXIDOREDUCTASE- KEYWDS 4 OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.L.PAULSEN,S.D.BENDEL,A.C.ANDERSON REVDAT 5 13-SEP-23 3QLX 1 REMARK SEQADV REVDAT 4 14-DEC-16 3QLX 1 COMPND REVDAT 3 20-NOV-13 3QLX 1 FORMUL HET HETATM HETNAM REVDAT 3 2 1 HETSYN SITE REVDAT 2 28-SEP-11 3QLX 1 JRNL REVDAT 1 20-JUL-11 3QLX 0 JRNL AUTH J.L.PAULSEN,S.D.BENDEL,A.C.ANDERSON JRNL TITL CRYSTAL STRUCTURES OF CANDIDA ALBICANS DIHYDROFOLATE JRNL TITL 2 REDUCTASE BOUND TO PROPARGYL-LINKED ANTIFOLATES REVEAL THE JRNL TITL 3 FLEXIBILITY OF ACTIVE SITE LOOP RESIDUES CRITICAL FOR LIGAND JRNL TITL 4 POTENCY AND SELECTIVITY. JRNL REF CHEM.BIOL.DRUG DES. V. 78 505 2011 JRNL REFN ISSN 1747-0277 JRNL PMID 21726415 JRNL DOI 10.1111/J.1747-0285.2011.01169.X REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 19811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1017 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.24 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1348 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3692 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 148 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.471 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.246 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.164 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.414 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3940 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5346 ; 1.121 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 448 ; 8.861 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;39.206 ;24.086 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 694 ;17.280 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;17.338 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 570 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2942 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1563 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2588 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 169 ; 0.117 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 112 ; 0.248 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 10 ; 0.077 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2318 ; 1.365 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3646 ; 2.094 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1915 ; 3.355 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1700 ; 4.721 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 1 B 227 1 REMARK 3 1 A 1 A 227 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 B (A): 1846 ; 0.110 ; 0.050 REMARK 3 TIGHT THERMAL 1 B (A**2): 1846 ; 0.140 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3QLX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000063810. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.100 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19811 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.239 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.33700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3CSE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, MGCL2, TRIS, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.06200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 58.03100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 174.09300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 85 110.23 -171.44 REMARK 500 SER A 97 113.75 -164.31 REMARK 500 LYS A 205 -133.26 47.91 REMARK 500 LEU B 85 110.11 -168.52 REMARK 500 SER B 97 116.20 -163.33 REMARK 500 LYS B 205 -133.47 47.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 122 GLY A 123 -124.55 REMARK 500 GLY B 122 GLY B 123 -125.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE QLR A 229 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE QLR B 229 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EEJ RELATED DB: PDB REMARK 900 CANDIDA GLABRATA DIHYDROFOLATE REDUCTASE COMPLEXED WITH 2,4-DIAMINO- REMARK 900 5-[3-METHYL-3-(3-METHOXY-5-PHENYLPHENYL)PROP-1-YNYL]-6- REMARK 900 METHYLPYRIMIDINE(UCP111D) AND NADPH REMARK 900 RELATED ID: 3EEK RELATED DB: PDB REMARK 900 CANDIDA GLABRATA DIHYDROFOLATE REDUCTASE COMPLEXED WITH 2,4-DIAMINO- REMARK 900 5-[3-METHYL-3-(3-METHOXY-5-(4-METHYLPHENYL)PHENYL)PROP-1-YNYL]-6- REMARK 900 METHYLPYRIMIDINE(UCP111D4M) AND NADPH REMARK 900 RELATED ID: 3EEL RELATED DB: PDB REMARK 900 CANDIDA GLABRATA DIHYDROFOLATE REDUCTASE COMPLEXED WITH 2,4-DIAMINO- REMARK 900 5-[3-METHYL-3-(3-METHOXY-5-(3,5-DIMETHYLPHENYL)PHENYL)PROP-1-YNYL]- REMARK 900 6-METHYLPYRIMIDINE(UCP11153TM) AND NADPH REMARK 900 RELATED ID: 3EEM RELATED DB: PDB REMARK 900 CANDIDA GLABRATA DIHYDROFOLATE REDUCTASE COMPLEXED WITH 2,4-DIAMINO- REMARK 900 5-[3-METHYL-3-(3-METHOXY-5-(2,6-DIMETHYLPHENYL)PHENYL)PROP-1-YNYL]- REMARK 900 6-METHYLPYRIMIDINE(UCP111D26M) AND NADPH REMARK 900 RELATED ID: 3CSE RELATED DB: PDB REMARK 900 CANDIDA GLABRATA DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND 2, REMARK 900 4-DIAMINO-5-(3-(2,5-DIMETHOXYPHENYL)PROP-1-YNYL)-6-ETHYLPYRIMIDINE REMARK 900 (UCP120B) DBREF 3QLX A 1 217 UNP Q6FPH0 Q6FPH0_CANGA 1 217 DBREF 3QLX B 1 217 UNP Q6FPH0 Q6FPH0_CANGA 1 217 SEQADV 3QLX LEU A 218 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX GLU A 219 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS A 220 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS A 221 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS A 222 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS A 223 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS A 224 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS A 225 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS A 226 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS A 227 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX LEU B 218 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX GLU B 219 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS B 220 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS B 221 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS B 222 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS B 223 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS B 224 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS B 225 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS B 226 UNP Q6FPH0 EXPRESSION TAG SEQADV 3QLX HIS B 227 UNP Q6FPH0 EXPRESSION TAG SEQRES 1 A 227 MET SER LYS VAL PRO VAL VAL GLY ILE VAL ALA ALA LEU SEQRES 2 A 227 LEU PRO GLU MET GLY ILE GLY PHE GLN GLY ASN LEU PRO SEQRES 3 A 227 TRP ARG LEU ALA LYS GLU MET LYS TYR PHE ARG GLU VAL SEQRES 4 A 227 THR THR LEU THR ASN ASP ASN SER LYS GLN ASN VAL VAL SEQRES 5 A 227 ILE MET GLY ARG LYS THR TRP GLU SER ILE PRO GLN LYS SEQRES 6 A 227 PHE ARG PRO LEU PRO LYS ARG ILE ASN VAL VAL VAL SER SEQRES 7 A 227 ARG SER PHE ASP GLY GLU LEU ARG LYS VAL GLU ASP GLY SEQRES 8 A 227 ILE TYR HIS SER ASN SER LEU ARG ASN CYS LEU THR ALA SEQRES 9 A 227 LEU GLN SER SER LEU ALA ASN GLU ASN LYS ILE GLU ARG SEQRES 10 A 227 ILE TYR ILE ILE GLY GLY GLY GLU ILE TYR ARG GLN SER SEQRES 11 A 227 MET ASP LEU ALA ASP HIS TRP LEU ILE THR LYS ILE MET SEQRES 12 A 227 PRO LEU PRO GLU THR THR ILE PRO GLN MET ASP THR PHE SEQRES 13 A 227 LEU GLN LYS GLN GLU LEU GLU GLN ARG PHE TYR ASP ASN SEQRES 14 A 227 SER ASP LYS LEU VAL ASP PHE LEU PRO SER SER ILE GLN SEQRES 15 A 227 LEU GLU GLY ARG LEU THR SER GLN GLU TRP ASN GLY GLU SEQRES 16 A 227 LEU VAL LYS GLY LEU PRO VAL GLN GLU LYS GLY TYR GLN SEQRES 17 A 227 PHE TYR PHE THR LEU TYR THR LYS LYS LEU GLU HIS HIS SEQRES 18 A 227 HIS HIS HIS HIS HIS HIS SEQRES 1 B 227 MET SER LYS VAL PRO VAL VAL GLY ILE VAL ALA ALA LEU SEQRES 2 B 227 LEU PRO GLU MET GLY ILE GLY PHE GLN GLY ASN LEU PRO SEQRES 3 B 227 TRP ARG LEU ALA LYS GLU MET LYS TYR PHE ARG GLU VAL SEQRES 4 B 227 THR THR LEU THR ASN ASP ASN SER LYS GLN ASN VAL VAL SEQRES 5 B 227 ILE MET GLY ARG LYS THR TRP GLU SER ILE PRO GLN LYS SEQRES 6 B 227 PHE ARG PRO LEU PRO LYS ARG ILE ASN VAL VAL VAL SER SEQRES 7 B 227 ARG SER PHE ASP GLY GLU LEU ARG LYS VAL GLU ASP GLY SEQRES 8 B 227 ILE TYR HIS SER ASN SER LEU ARG ASN CYS LEU THR ALA SEQRES 9 B 227 LEU GLN SER SER LEU ALA ASN GLU ASN LYS ILE GLU ARG SEQRES 10 B 227 ILE TYR ILE ILE GLY GLY GLY GLU ILE TYR ARG GLN SER SEQRES 11 B 227 MET ASP LEU ALA ASP HIS TRP LEU ILE THR LYS ILE MET SEQRES 12 B 227 PRO LEU PRO GLU THR THR ILE PRO GLN MET ASP THR PHE SEQRES 13 B 227 LEU GLN LYS GLN GLU LEU GLU GLN ARG PHE TYR ASP ASN SEQRES 14 B 227 SER ASP LYS LEU VAL ASP PHE LEU PRO SER SER ILE GLN SEQRES 15 B 227 LEU GLU GLY ARG LEU THR SER GLN GLU TRP ASN GLY GLU SEQRES 16 B 227 LEU VAL LYS GLY LEU PRO VAL GLN GLU LYS GLY TYR GLN SEQRES 17 B 227 PHE TYR PHE THR LEU TYR THR LYS LYS LEU GLU HIS HIS SEQRES 18 B 227 HIS HIS HIS HIS HIS HIS HET NDP A 228 48 HET QLR A 229 26 HET NDP B 228 48 HET QLR B 229 26 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM QLR 6-METHYL-5-[(3R)-3-(3,4,5-TRIMETHOXYPHENYL)PENT-1-YN-1- HETNAM 2 QLR YL]PYRIMIDINE-2,4-DIAMINE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 4 QLR 2(C19 H24 N4 O3) FORMUL 7 HOH *74(H2 O) HELIX 1 1 LEU A 29 LEU A 42 1 14 HELIX 2 2 ARG A 56 SER A 61 1 6 HELIX 3 3 SER A 97 SER A 107 1 11 HELIX 4 4 SER A 107 GLU A 112 1 6 HELIX 5 5 GLY A 123 GLN A 129 1 7 HELIX 6 6 GLN A 158 ARG A 165 1 8 HELIX 7 7 LYS A 172 LEU A 177 1 6 HELIX 8 8 LEU B 29 LEU B 42 1 14 HELIX 9 9 ARG B 56 SER B 61 1 6 HELIX 10 10 SER B 97 SER B 107 1 11 HELIX 11 11 SER B 107 GLU B 112 1 6 HELIX 12 12 GLY B 123 GLN B 129 1 7 HELIX 13 13 GLN B 158 ARG B 165 1 8 HELIX 14 14 LYS B 172 LEU B 177 1 6 SHEET 1 A 9 ARG A 86 GLU A 89 0 SHEET 2 A 9 ILE A 92 SER A 95 -1 O HIS A 94 N ARG A 86 SHEET 3 A 9 ILE A 73 VAL A 77 1 N ASN A 74 O TYR A 93 SHEET 4 A 9 GLN A 49 GLY A 55 1 N VAL A 52 O ILE A 73 SHEET 5 A 9 ILE A 115 GLY A 122 1 O TYR A 119 N ILE A 53 SHEET 6 A 9 VAL A 6 LEU A 13 1 N VAL A 7 O ILE A 118 SHEET 7 A 9 HIS A 136 PRO A 144 1 O LEU A 138 N GLY A 8 SHEET 8 A 9 TYR A 207 LYS A 216 -1 O TYR A 210 N LYS A 141 SHEET 9 A 9 PHE A 166 ASP A 168 -1 N TYR A 167 O THR A 215 SHEET 1 B10 ARG A 86 GLU A 89 0 SHEET 2 B10 ILE A 92 SER A 95 -1 O HIS A 94 N ARG A 86 SHEET 3 B10 ILE A 73 VAL A 77 1 N ASN A 74 O TYR A 93 SHEET 4 B10 GLN A 49 GLY A 55 1 N VAL A 52 O ILE A 73 SHEET 5 B10 ILE A 115 GLY A 122 1 O TYR A 119 N ILE A 53 SHEET 6 B10 VAL A 6 LEU A 13 1 N VAL A 7 O ILE A 118 SHEET 7 B10 HIS A 136 PRO A 144 1 O LEU A 138 N GLY A 8 SHEET 8 B10 TYR A 207 LYS A 216 -1 O TYR A 210 N LYS A 141 SHEET 9 B10 GLU A 195 GLU A 204 -1 N VAL A 202 O PHE A 209 SHEET 10 B10 THR A 188 TRP A 192 -1 N GLN A 190 O VAL A 197 SHEET 1 C 2 GLY A 18 GLY A 20 0 SHEET 2 C 2 THR A 155 PHE A 156 -1 O THR A 155 N ILE A 19 SHEET 1 D 9 ARG B 86 GLU B 89 0 SHEET 2 D 9 ILE B 92 SER B 95 -1 O HIS B 94 N ARG B 86 SHEET 3 D 9 ILE B 73 VAL B 77 1 N ASN B 74 O TYR B 93 SHEET 4 D 9 GLN B 49 GLY B 55 1 N VAL B 52 O ILE B 73 SHEET 5 D 9 ILE B 115 GLY B 122 1 O TYR B 119 N ILE B 53 SHEET 6 D 9 VAL B 6 LEU B 13 1 N VAL B 7 O ILE B 118 SHEET 7 D 9 HIS B 136 PRO B 144 1 O LEU B 138 N GLY B 8 SHEET 8 D 9 TYR B 207 LYS B 216 -1 O TYR B 210 N LYS B 141 SHEET 9 D 9 PHE B 166 ASP B 168 -1 N TYR B 167 O THR B 215 SHEET 1 E10 ARG B 86 GLU B 89 0 SHEET 2 E10 ILE B 92 SER B 95 -1 O HIS B 94 N ARG B 86 SHEET 3 E10 ILE B 73 VAL B 77 1 N ASN B 74 O TYR B 93 SHEET 4 E10 GLN B 49 GLY B 55 1 N VAL B 52 O ILE B 73 SHEET 5 E10 ILE B 115 GLY B 122 1 O TYR B 119 N ILE B 53 SHEET 6 E10 VAL B 6 LEU B 13 1 N VAL B 7 O ILE B 118 SHEET 7 E10 HIS B 136 PRO B 144 1 O LEU B 138 N GLY B 8 SHEET 8 E10 TYR B 207 LYS B 216 -1 O TYR B 210 N LYS B 141 SHEET 9 E10 GLU B 195 GLU B 204 -1 N VAL B 202 O PHE B 209 SHEET 10 E10 THR B 188 TRP B 192 -1 N GLN B 190 O VAL B 197 SHEET 1 F 2 GLY B 18 GLY B 20 0 SHEET 2 F 2 THR B 155 PHE B 156 -1 O THR B 155 N ILE B 19 CISPEP 1 LEU A 14 PRO A 15 0 0.02 CISPEP 2 ARG A 67 PRO A 68 0 4.09 CISPEP 3 LEU B 14 PRO B 15 0 -1.59 CISPEP 4 ARG B 67 PRO B 68 0 4.82 SITE 1 AC1 28 VAL A 10 ALA A 11 ILE A 19 GLY A 20 SITE 2 AC1 28 GLY A 23 ASN A 24 LEU A 25 GLY A 55 SITE 3 AC1 28 ARG A 56 LYS A 57 THR A 58 VAL A 77 SITE 4 AC1 28 SER A 78 ARG A 79 ASN A 96 SER A 97 SITE 5 AC1 28 LEU A 98 ILE A 121 GLY A 123 GLY A 124 SITE 6 AC1 28 GLU A 125 ILE A 126 TYR A 127 GLN A 129 SITE 7 AC1 28 QLR A 229 HOH A 248 HOH A 252 HOH A 257 SITE 1 AC2 27 VAL B 10 ALA B 11 ILE B 19 GLY B 20 SITE 2 AC2 27 GLY B 23 ASN B 24 LEU B 25 GLY B 55 SITE 3 AC2 27 ARG B 56 LYS B 57 THR B 58 VAL B 77 SITE 4 AC2 27 SER B 78 ARG B 79 ASN B 96 SER B 97 SITE 5 AC2 27 LEU B 98 ILE B 121 GLY B 123 GLY B 124 SITE 6 AC2 27 GLU B 125 ILE B 126 TYR B 127 GLN B 129 SITE 7 AC2 27 QLR B 229 HOH B 248 HOH B 254 SITE 1 AC3 12 ILE A 9 VAL A 10 ALA A 11 GLU A 32 SITE 2 AC3 12 MET A 33 PHE A 36 THR A 58 PRO A 63 SITE 3 AC3 12 ILE A 121 TYR A 127 THR A 140 NDP A 228 SITE 1 AC4 14 ILE B 9 VAL B 10 ALA B 11 GLU B 32 SITE 2 AC4 14 MET B 33 PHE B 36 THR B 58 SER B 61 SITE 3 AC4 14 PRO B 63 LEU B 69 ILE B 121 TYR B 127 SITE 4 AC4 14 THR B 140 NDP B 228 CRYST1 42.757 42.757 232.124 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023388 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023388 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004308 0.00000