HEADER DNA BINDING PROTEIN/GENE REGULATION 09-FEB-11 3QO2 TITLE STRUCTURAL INSIGHTS FOR MPP8 CHROMODOMAIN INTERACTION WITH HISTONE H3 TITLE 2 LYSINE 9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: M-PHASE PHOSPHOPROTEIN 8; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 55-116; COMPND 5 SYNONYM: TWO HYBRID-ASSOCIATED PROTEIN 3 WITH RANBPM, TWA3; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HISTONE H3 PEPTIDE; COMPND 9 CHAIN: P, Q, R, S; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MPHOSPH8, MPP8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PXC; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_COMMON: SYNTHETIC; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS EPIGENETICS, MPP8 PHOSPHORYLATION, CHROMODOMAIN, MPP8-H3K9ME KEYWDS 2 MODULATES THE EXPRESSION OF E-CADHERIN, H3K9 METHYL-LYSINE BINDING, KEYWDS 3 TRI-METHYL-LYSINE, DNA BINDING PROTEIN-GENE REGULATION COMPLEX, KEYWDS 4 HISTONE H3 TAIL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHANG,J.R.HORTON,M.T.BEDFORD,X.ZHANG,X.CHENG REVDAT 4 13-SEP-23 3QO2 1 REMARK SEQADV LINK REVDAT 3 08-NOV-17 3QO2 1 REMARK REVDAT 2 29-FEB-12 3QO2 1 JRNL VERSN REVDAT 1 06-APR-11 3QO2 0 JRNL AUTH Y.CHANG,J.R.HORTON,M.T.BEDFORD,X.ZHANG,X.CHENG JRNL TITL STRUCTURAL INSIGHTS FOR MPP8 CHROMODOMAIN INTERACTION WITH JRNL TITL 2 HISTONE H3 LYSINE 9: POTENTIAL EFFECT OF PHOSPHORYLATION ON JRNL TITL 3 METHYL-LYSINE BINDING. JRNL REF J.MOL.BIOL. V. 408 807 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21419134 JRNL DOI 10.1016/J.JMB.2011.03.018 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 12215 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.9405 - 3.9506 0.99 3219 189 0.2199 0.2687 REMARK 3 2 3.9506 - 3.1366 0.97 2999 127 0.1878 0.2929 REMARK 3 3 3.1366 - 2.7404 0.93 2794 182 0.2091 0.2947 REMARK 3 4 2.7404 - 2.4899 0.86 2592 113 0.2362 0.3487 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 60.13 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.09340 REMARK 3 B22 (A**2) : -2.09340 REMARK 3 B33 (A**2) : 4.18680 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2410 REMARK 3 ANGLE : 1.054 3233 REMARK 3 CHIRALITY : 0.061 352 REMARK 3 PLANARITY : 0.003 402 REMARK 3 DIHEDRAL : 17.988 932 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QO2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-FEB-11. REMARK 100 THE DEPOSITION ID IS D_1000063887. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13038 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 31.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.86400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3LWE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 % W/V POLYETHYLENE GLYCOL PEG400, REMARK 280 30 % W/V PEG 1500 AND 0.1 M HEPES, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 119.39600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.73050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.73050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 179.09400 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.73050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.73050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 59.69800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.73050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.73050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 179.09400 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.73050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.73050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 59.69800 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 119.39600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -2 REMARK 465 ALA A 115 REMARK 465 LYS A 116 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 GLY B 55 REMARK 465 GLU B 56 REMARK 465 LYS B 116 REMARK 465 ALA Q 1 REMARK 465 ARG Q 2 REMARK 465 HIS C -2 REMARK 465 MET C -1 REMARK 465 GLY C 55 REMARK 465 ALA C 115 REMARK 465 LYS C 116 REMARK 465 ALA R 1 REMARK 465 HIS D -2 REMARK 465 MET D -1 REMARK 465 GLY D 55 REMARK 465 ALA D 115 REMARK 465 LYS D 116 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 470 LYS A 100 CE NZ REMARK 470 ARG P 2 CG CD NE CZ NH1 NH2 REMARK 470 THR Q 3 OG1 CG2 REMARK 470 LYS Q 4 CG CD CE NZ REMARK 470 GLU C 56 CG CD OE1 OE2 REMARK 470 GLU C 97 CG CD OE1 OE2 REMARK 470 LYS C 100 CG CD CE NZ REMARK 470 GLU C 101 CG CD OE1 OE2 REMARK 470 LEU C 104 CG CD1 CD2 REMARK 470 GLU C 105 CG CD OE1 OE2 REMARK 470 LYS C 108 CG CD CE NZ REMARK 470 LYS C 109 CG CD CE NZ REMARK 470 ASN C 113 CG OD1 ND2 REMARK 470 ARG R 2 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 56 CG CD OE1 OE2 REMARK 470 GLU D 60 CG CD OE1 OE2 REMARK 470 LYS D 100 CG CD CE NZ REMARK 470 LYS D 108 CG CD CE NZ REMARK 470 LYS D 109 CG CD CE NZ REMARK 470 LYS D 114 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 56 100.67 -59.17 REMARK 500 GLU A 112 -12.44 -47.73 REMARK 500 ASN A 113 13.11 -142.34 REMARK 500 LEU B 96 30.82 -98.48 REMARK 500 ASP B 98 66.06 -118.37 REMARK 500 CYS B 99 21.63 -150.32 REMARK 500 ASN B 113 3.40 -63.79 REMARK 500 ASP C 57 62.78 -102.92 REMARK 500 GLU C 70 130.54 -174.11 REMARK 500 CYS C 99 52.50 -154.99 REMARK 500 GLU C 112 -80.31 -53.91 REMARK 500 LYS R 14 125.30 -37.35 REMARK 500 GLU D 62 -75.51 -81.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO D 4 DBREF 3QO2 A 55 116 UNP Q99549 MPP8_HUMAN 55 116 DBREF 3QO2 B 55 116 UNP Q99549 MPP8_HUMAN 55 116 DBREF 3QO2 C 55 116 UNP Q99549 MPP8_HUMAN 55 116 DBREF 3QO2 D 55 116 UNP Q99549 MPP8_HUMAN 55 116 DBREF 3QO2 P 1 15 PDB 3QO2 3QO2 1 15 DBREF 3QO2 Q 1 15 PDB 3QO2 3QO2 1 15 DBREF 3QO2 R 1 15 PDB 3QO2 3QO2 1 15 DBREF 3QO2 S 1 15 PDB 3QO2 3QO2 1 15 SEQADV 3QO2 HIS A -2 UNP Q99549 EXPRESSION TAG SEQADV 3QO2 MET A -1 UNP Q99549 EXPRESSION TAG SEQADV 3QO2 HIS B -2 UNP Q99549 EXPRESSION TAG SEQADV 3QO2 MET B -1 UNP Q99549 EXPRESSION TAG SEQADV 3QO2 HIS C -2 UNP Q99549 EXPRESSION TAG SEQADV 3QO2 MET C -1 UNP Q99549 EXPRESSION TAG SEQADV 3QO2 HIS D -2 UNP Q99549 EXPRESSION TAG SEQADV 3QO2 MET D -1 UNP Q99549 EXPRESSION TAG SEQRES 1 A 64 HIS MET GLY GLU ASP VAL PHE GLU VAL GLU LYS ILE LEU SEQRES 2 A 64 ASP MET LYS THR GLU GLY GLY LYS VAL LEU TYR LYS VAL SEQRES 3 A 64 ARG TRP LYS GLY TYR THR SER ASP ASP ASP THR TRP GLU SEQRES 4 A 64 PRO GLU ILE HIS LEU GLU ASP CYS LYS GLU VAL LEU LEU SEQRES 5 A 64 GLU PHE ARG LYS LYS ILE ALA GLU ASN LYS ALA LYS SEQRES 1 P 15 ALA ARG THR LYS GLN THR ALA ARG M3L SER THR GLY GLY SEQRES 2 P 15 LYS ALA SEQRES 1 B 64 HIS MET GLY GLU ASP VAL PHE GLU VAL GLU LYS ILE LEU SEQRES 2 B 64 ASP MET LYS THR GLU GLY GLY LYS VAL LEU TYR LYS VAL SEQRES 3 B 64 ARG TRP LYS GLY TYR THR SER ASP ASP ASP THR TRP GLU SEQRES 4 B 64 PRO GLU ILE HIS LEU GLU ASP CYS LYS GLU VAL LEU LEU SEQRES 5 B 64 GLU PHE ARG LYS LYS ILE ALA GLU ASN LYS ALA LYS SEQRES 1 Q 15 ALA ARG THR LYS GLN THR ALA ARG M3L SER THR GLY GLY SEQRES 2 Q 15 LYS ALA SEQRES 1 C 64 HIS MET GLY GLU ASP VAL PHE GLU VAL GLU LYS ILE LEU SEQRES 2 C 64 ASP MET LYS THR GLU GLY GLY LYS VAL LEU TYR LYS VAL SEQRES 3 C 64 ARG TRP LYS GLY TYR THR SER ASP ASP ASP THR TRP GLU SEQRES 4 C 64 PRO GLU ILE HIS LEU GLU ASP CYS LYS GLU VAL LEU LEU SEQRES 5 C 64 GLU PHE ARG LYS LYS ILE ALA GLU ASN LYS ALA LYS SEQRES 1 R 15 ALA ARG THR LYS GLN THR ALA ARG M3L SER THR GLY GLY SEQRES 2 R 15 LYS ALA SEQRES 1 D 64 HIS MET GLY GLU ASP VAL PHE GLU VAL GLU LYS ILE LEU SEQRES 2 D 64 ASP MET LYS THR GLU GLY GLY LYS VAL LEU TYR LYS VAL SEQRES 3 D 64 ARG TRP LYS GLY TYR THR SER ASP ASP ASP THR TRP GLU SEQRES 4 D 64 PRO GLU ILE HIS LEU GLU ASP CYS LYS GLU VAL LEU LEU SEQRES 5 D 64 GLU PHE ARG LYS LYS ILE ALA GLU ASN LYS ALA LYS SEQRES 1 S 15 ALA ARG THR LYS GLN THR ALA ARG M3L SER THR GLY GLY SEQRES 2 S 15 LYS ALA MODRES 3QO2 M3L P 9 LYS N-TRIMETHYLLYSINE MODRES 3QO2 M3L Q 9 LYS N-TRIMETHYLLYSINE MODRES 3QO2 M3L R 9 LYS N-TRIMETHYLLYSINE MODRES 3QO2 M3L S 9 LYS N-TRIMETHYLLYSINE HET M3L P 9 12 HET M3L Q 9 12 HET M3L R 9 12 HET M3L S 9 12 HET EDO C 3 4 HET EDO D 2 4 HET EDO D 4 4 HETNAM M3L N-TRIMETHYLLYSINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 M3L 4(C9 H21 N2 O2 1+) FORMUL 9 EDO 3(C2 H6 O2) FORMUL 12 HOH *83(H2 O) HELIX 1 1 THR A 84 ASP A 87 5 4 HELIX 2 2 ILE A 94 LEU A 96 5 3 HELIX 3 3 CYS A 99 GLU A 112 1 14 HELIX 4 4 ILE B 94 GLU B 97 5 4 HELIX 5 5 CYS B 99 ASN B 113 1 15 HELIX 6 6 THR C 84 ASP C 87 5 4 HELIX 7 7 ILE C 94 ASP C 98 5 5 HELIX 8 8 CYS C 99 LYS C 114 1 16 HELIX 9 9 THR D 84 ASP D 87 5 4 HELIX 10 10 ILE D 94 ASP D 98 5 5 HELIX 11 11 CYS D 99 LYS D 114 1 16 SHEET 1 A 5 THR P 6 ARG P 8 0 SHEET 2 A 5 VAL A 58 GLU A 70 -1 N PHE A 59 O ALA P 7 SHEET 3 A 5 LYS A 73 TRP A 80 -1 O ARG A 79 N GLU A 62 SHEET 4 A 5 THR A 89 PRO A 92 -1 O THR A 89 N VAL A 78 SHEET 5 A 5 GLY S 13 LYS S 14 -1 O GLY S 13 N TRP A 90 SHEET 1 B 5 GLY P 13 LYS P 14 0 SHEET 2 B 5 THR D 89 PRO D 92 -1 O TRP D 90 N GLY P 13 SHEET 3 B 5 LYS D 73 TRP D 80 -1 N TYR D 76 O GLU D 91 SHEET 4 B 5 VAL D 58 GLU D 70 -1 N GLU D 62 O ARG D 79 SHEET 5 B 5 THR S 6 ARG S 8 -1 O ALA S 7 N PHE D 59 SHEET 1 C 5 THR Q 6 ARG Q 8 0 SHEET 2 C 5 VAL B 58 GLU B 70 -1 N PHE B 59 O ALA Q 7 SHEET 3 C 5 LYS B 73 TRP B 80 -1 O LEU B 75 N LYS B 68 SHEET 4 C 5 THR B 89 PRO B 92 -1 O GLU B 91 N TYR B 76 SHEET 5 C 5 GLY R 13 LYS R 14 -1 O GLY R 13 N TRP B 90 SHEET 1 D 5 GLY Q 13 LYS Q 14 0 SHEET 2 D 5 THR C 89 PRO C 92 -1 O TRP C 90 N GLY Q 13 SHEET 3 D 5 LYS C 73 TRP C 80 -1 N TYR C 76 O GLU C 91 SHEET 4 D 5 VAL C 58 GLU C 70 -1 N LYS C 68 O LEU C 75 SHEET 5 D 5 THR R 6 ARG R 8 -1 O ALA R 7 N PHE C 59 LINK C ARG P 8 N M3L P 9 1555 1555 1.33 LINK C M3L P 9 N SER P 10 1555 1555 1.32 LINK C ARG Q 8 N M3L Q 9 1555 1555 1.33 LINK C M3L Q 9 N SER Q 10 1555 1555 1.32 LINK C ARG R 8 N M3L R 9 1555 1555 1.43 LINK C M3L R 9 N SER R 10 1555 1555 1.35 LINK C ARG S 8 N M3L S 9 1555 1555 1.31 LINK C M3L S 9 N SER S 10 1555 1555 1.24 CISPEP 1 ALA P 1 ARG P 2 0 -0.62 CISPEP 2 ALA S 1 ARG S 2 0 -5.02 SITE 1 AC1 5 LYS A 63 LEU A 65 ARG A 79 GLY C 82 SITE 2 AC1 5 TYR C 83 SITE 1 AC2 4 LYS D 68 GLU D 70 THR P 11 LYS S 14 SITE 1 AC3 3 LYS D 77 SER D 85 ASP D 88 CRYST1 53.461 53.461 238.792 90.00 90.00 90.00 P 43 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018705 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018705 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004188 0.00000