data_3QTH # _entry.id 3QTH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3QTH pdb_00003qth 10.2210/pdb3qth/pdb RCSB RCSB064082 ? ? WWPDB D_1000064082 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 401373 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3QTH _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-02-22 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a Hypothetical DinB-like protein (CPS_3021) from Colwellia psychrerythraea 34H at 2.20 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3QTH _cell.length_a 52.112 _cell.length_b 75.026 _cell.length_c 101.404 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3QTH _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 20225.342 2 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 4 water nat water 18.015 88 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)LSRIDLYIKHRDIFLKHLELLHKLIEKVEDSSLNESELLNARLVDD(MSE)FPFNVQAKIATNFALRACCPLSG KEYKELEGDIDSFCGLKTYVVTAIDYINKLSEPTLEQLNLNVQDTAGFKEIS(MSE)PASEY(MSE)SSFVLPNFFFHIS (MSE)VYAIAKNNGVSVTKGDFDGIHQYPKGFSWEA ; _entity_poly.pdbx_seq_one_letter_code_can ;GMLSRIDLYIKHRDIFLKHLELLHKLIEKVEDSSLNESELLNARLVDDMFPFNVQAKIATNFALRACCPLSGKEYKELEG DIDSFCGLKTYVVTAIDYINKLSEPTLEQLNLNVQDTAGFKEISMPASEYMSSFVLPNFFFHISMVYAIAKNNGVSVTKG DFDGIHQYPKGFSWEA ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 401373 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 LEU n 1 4 SER n 1 5 ARG n 1 6 ILE n 1 7 ASP n 1 8 LEU n 1 9 TYR n 1 10 ILE n 1 11 LYS n 1 12 HIS n 1 13 ARG n 1 14 ASP n 1 15 ILE n 1 16 PHE n 1 17 LEU n 1 18 LYS n 1 19 HIS n 1 20 LEU n 1 21 GLU n 1 22 LEU n 1 23 LEU n 1 24 HIS n 1 25 LYS n 1 26 LEU n 1 27 ILE n 1 28 GLU n 1 29 LYS n 1 30 VAL n 1 31 GLU n 1 32 ASP n 1 33 SER n 1 34 SER n 1 35 LEU n 1 36 ASN n 1 37 GLU n 1 38 SER n 1 39 GLU n 1 40 LEU n 1 41 LEU n 1 42 ASN n 1 43 ALA n 1 44 ARG n 1 45 LEU n 1 46 VAL n 1 47 ASP n 1 48 ASP n 1 49 MSE n 1 50 PHE n 1 51 PRO n 1 52 PHE n 1 53 ASN n 1 54 VAL n 1 55 GLN n 1 56 ALA n 1 57 LYS n 1 58 ILE n 1 59 ALA n 1 60 THR n 1 61 ASN n 1 62 PHE n 1 63 ALA n 1 64 LEU n 1 65 ARG n 1 66 ALA n 1 67 CYS n 1 68 CYS n 1 69 PRO n 1 70 LEU n 1 71 SER n 1 72 GLY n 1 73 LYS n 1 74 GLU n 1 75 TYR n 1 76 LYS n 1 77 GLU n 1 78 LEU n 1 79 GLU n 1 80 GLY n 1 81 ASP n 1 82 ILE n 1 83 ASP n 1 84 SER n 1 85 PHE n 1 86 CYS n 1 87 GLY n 1 88 LEU n 1 89 LYS n 1 90 THR n 1 91 TYR n 1 92 VAL n 1 93 VAL n 1 94 THR n 1 95 ALA n 1 96 ILE n 1 97 ASP n 1 98 TYR n 1 99 ILE n 1 100 ASN n 1 101 LYS n 1 102 LEU n 1 103 SER n 1 104 GLU n 1 105 PRO n 1 106 THR n 1 107 LEU n 1 108 GLU n 1 109 GLN n 1 110 LEU n 1 111 ASN n 1 112 LEU n 1 113 ASN n 1 114 VAL n 1 115 GLN n 1 116 ASP n 1 117 THR n 1 118 ALA n 1 119 GLY n 1 120 PHE n 1 121 LYS n 1 122 GLU n 1 123 ILE n 1 124 SER n 1 125 MSE n 1 126 PRO n 1 127 ALA n 1 128 SER n 1 129 GLU n 1 130 TYR n 1 131 MSE n 1 132 SER n 1 133 SER n 1 134 PHE n 1 135 VAL n 1 136 LEU n 1 137 PRO n 1 138 ASN n 1 139 PHE n 1 140 PHE n 1 141 PHE n 1 142 HIS n 1 143 ILE n 1 144 SER n 1 145 MSE n 1 146 VAL n 1 147 TYR n 1 148 ALA n 1 149 ILE n 1 150 ALA n 1 151 LYS n 1 152 ASN n 1 153 ASN n 1 154 GLY n 1 155 VAL n 1 156 SER n 1 157 VAL n 1 158 THR n 1 159 LYS n 1 160 GLY n 1 161 ASP n 1 162 PHE n 1 163 ASP n 1 164 GLY n 1 165 ILE n 1 166 HIS n 1 167 GLN n 1 168 TYR n 1 169 PRO n 1 170 LYS n 1 171 GLY n 1 172 PHE n 1 173 SER n 1 174 TRP n 1 175 GLU n 1 176 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CPS_3021 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain '34H / ATCC BAA-681' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Colwellia psychrerythraea' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 167879 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q47ZP9_COLP3 _struct_ref.pdbx_db_accession Q47ZP9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLSRIDLYIKHRDIFLKHLELLHKLIEKVEDSSLNESELLNARLVDDMFPFNVQAKIATNFALRACCPLSGKEYKELEGD IDSFCGLKTYVVTAIDYINKLSEPTLEQLNLNVQDTAGFKEISMPASEYMSSFVLPNFFFHISMVYAIAKNNGVSVTKGD FDGIHQYPKGFSWEA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3QTH A 2 ? 176 ? Q47ZP9 1 ? 175 ? 1 175 2 1 3QTH B 2 ? 176 ? Q47ZP9 1 ? 175 ? 1 175 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3QTH GLY A 1 ? UNP Q47ZP9 ? ? 'expression tag' 0 1 2 3QTH GLY B 1 ? UNP Q47ZP9 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3QTH # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '1.700M (NH4)2SO4, 15.00% Glycerol, 1.700% PEG-400, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2011-01-28 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97908 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength 0.97908 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3QTH _reflns.d_resolution_high 2.20 _reflns.d_resolution_low 29.159 _reflns.number_all 20863 _reflns.number_obs 20863 _reflns.pdbx_netI_over_sigmaI 10.400 _reflns.pdbx_Rsym_value 0.105 _reflns.pdbx_redundancy 7.200 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate 42.196 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.200 2.260 ? 10860 ? 0.941 0.8 0.941 ? 7.200 ? 1513 100.000 1 1 2.260 2.320 ? 10696 ? 0.793 1.0 0.793 ? 7.300 ? 1461 100.000 2 1 2.320 2.390 ? 10554 ? 0.667 1.1 0.667 ? 7.300 ? 1451 100.000 3 1 2.390 2.460 ? 10140 ? 0.514 1.5 0.514 ? 7.300 ? 1385 100.000 4 1 2.460 2.540 ? 9940 ? 0.392 2.0 0.392 ? 7.300 ? 1366 100.000 5 1 2.540 2.630 ? 9644 ? 0.318 2.4 0.318 ? 7.300 ? 1323 100.000 6 1 2.630 2.730 ? 9241 ? 0.280 2.7 0.280 ? 7.300 ? 1267 100.000 7 1 2.730 2.840 ? 8845 ? 0.217 3.5 0.217 ? 7.300 ? 1215 100.000 8 1 2.840 2.970 ? 8638 ? 0.159 4.7 0.159 ? 7.300 ? 1187 100.000 9 1 2.970 3.110 ? 8127 ? 0.138 5.2 0.138 ? 7.200 ? 1121 100.000 10 1 3.110 3.280 ? 7800 ? 0.121 5.7 0.121 ? 7.200 ? 1082 100.000 11 1 3.280 3.480 ? 7446 ? 0.106 5.9 0.106 ? 7.200 ? 1031 100.000 12 1 3.480 3.720 ? 6883 ? 0.102 6.3 0.102 ? 7.200 ? 957 100.000 13 1 3.720 4.020 ? 6485 ? 0.087 6.9 0.087 ? 7.200 ? 906 100.000 14 1 4.020 4.400 ? 5955 ? 0.069 9.0 0.069 ? 7.100 ? 835 100.000 15 1 4.400 4.920 ? 5317 ? 0.060 10.4 0.060 ? 7.100 ? 750 100.000 16 1 4.920 5.680 ? 4861 ? 0.065 9.6 0.065 ? 7.000 ? 692 100.000 17 1 5.680 6.960 ? 3981 ? 0.076 8.5 0.076 ? 6.900 ? 580 100.000 18 1 6.960 9.840 ? 3073 ? 0.049 12.0 0.049 ? 6.600 ? 465 99.900 19 1 9.840 29.159 ? 1631 ? 0.050 12.5 0.050 ? 5.900 ? 276 95.800 20 1 # _refine.entry_id 3QTH _refine.ls_d_res_high 2.2000 _refine.ls_d_res_low 29.159 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs ? _refine.ls_number_reflns_obs 20809 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. CHLORIDE (CL) FROM THE PURIFICATION BUFFERS AND GLYCEROL (GOL) FROM THE CRYSTALLIZATION SOLUTION WERE MODELED INTO THE STRUCTURE. 3. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR RESTRAINT REPRESENTATION (-AUTONCS).5. THE REFINEMENT WAS RESTRAINED AGAINST THE SAD PHASES. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1830 _refine.ls_R_factor_R_work 0.1817 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2089 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1200 _refine.ls_number_reflns_R_free 1066 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 52.4615 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -6.2788 _refine.aniso_B[2][2] 1.8075 _refine.aniso_B[3][3] 4.4713 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9574 _refine.correlation_coeff_Fo_to_Fc_free 0.9452 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 149.650 _refine.B_iso_min 28.110 _refine.occupancy_max 1.000 _refine.occupancy_min 0.370 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2622 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 2736 _refine_hist.d_res_high 2.2000 _refine_hist.d_res_low 29.159 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_dihedral_angle_d 1286 ? ? 2.000 'X-RAY DIFFRACTION' SINUSOIDAL t_trig_c_planes 67 ? ? 2.000 'X-RAY DIFFRACTION' HARMONIC t_gen_planes 406 ? ? 5.000 'X-RAY DIFFRACTION' HARMONIC t_it 2757 ? ? 20.000 'X-RAY DIFFRACTION' HARMONIC t_nbd 1 ? ? 5.000 'X-RAY DIFFRACTION' SEMIHARMONIC t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion 364 ? ? 5.000 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact 3311 ? ? 4.000 'X-RAY DIFFRACTION' SEMIHARMONIC t_bond_d 2757 0.010 ? 2.000 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 3736 0.990 ? 2.000 'X-RAY DIFFRACTION' HARMONIC t_omega_torsion ? 2.760 ? ? 'X-RAY DIFFRACTION' ? t_other_torsion ? 3.000 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.2000 _refine_ls_shell.d_res_low 2.3200 _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.number_reflns_R_work 2798 _refine_ls_shell.R_factor_all 0.2190 _refine_ls_shell.R_factor_R_work 0.2171 _refine_ls_shell.R_factor_R_free 0.2506 _refine_ls_shell.percent_reflns_R_free 5.7000 _refine_ls_shell.number_reflns_R_free 169 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2967 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3QTH _struct.title 'Crystal structure of a DinB-like protein (CPS_3021) from Colwellia psychrerythraea 34H at 2.20 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;DINB/YFIT-LIKE PUTATIVE METALLOENZYMES, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 3QTH # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? ASP A 32 ? GLY A 0 ASP A 31 1 ? 32 HELX_P HELX_P2 2 ASN A 36 ? ASN A 42 ? ASN A 35 ASN A 41 1 ? 7 HELX_P HELX_P3 3 PRO A 51 ? CYS A 68 ? PRO A 50 CYS A 67 1 ? 18 HELX_P HELX_P4 4 PRO A 69 ? GLY A 72 ? PRO A 68 GLY A 71 5 ? 4 HELX_P HELX_P5 5 SER A 84 ? LEU A 102 ? SER A 83 LEU A 101 1 ? 19 HELX_P HELX_P6 6 THR A 106 ? ASN A 111 ? THR A 105 ASN A 110 1 ? 6 HELX_P HELX_P7 7 ALA A 127 ? PHE A 134 ? ALA A 126 PHE A 133 1 ? 8 HELX_P HELX_P8 8 PHE A 134 ? ASN A 153 ? PHE A 133 ASN A 152 1 ? 20 HELX_P HELX_P9 9 THR A 158 ? GLY A 164 ? THR A 157 GLY A 163 1 ? 7 HELX_P HELX_P10 10 LEU B 3 ? ASP B 32 ? LEU B 2 ASP B 31 1 ? 30 HELX_P HELX_P11 11 ASN B 36 ? ASN B 42 ? ASN B 35 ASN B 41 1 ? 7 HELX_P HELX_P12 12 PRO B 51 ? CYS B 68 ? PRO B 50 CYS B 67 1 ? 18 HELX_P HELX_P13 13 SER B 84 ? LEU B 102 ? SER B 83 LEU B 101 1 ? 19 HELX_P HELX_P14 14 THR B 106 ? LEU B 112 ? THR B 105 LEU B 111 1 ? 7 HELX_P HELX_P15 15 ALA B 127 ? PHE B 134 ? ALA B 126 PHE B 133 1 ? 8 HELX_P HELX_P16 16 PHE B 134 ? ASN B 153 ? PHE B 133 ASN B 152 1 ? 20 HELX_P HELX_P17 17 THR B 158 ? GLY B 164 ? THR B 157 GLY B 163 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A LEU 3 N ? ? A MSE 1 A LEU 2 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale3 covale both ? A ASP 48 C ? ? ? 1_555 A MSE 49 N ? ? A ASP 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale4 covale both ? A MSE 49 C ? ? ? 1_555 A PHE 50 N ? ? A MSE 48 A PHE 49 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale5 covale both ? A SER 124 C ? ? ? 1_555 A MSE 125 N ? ? A SER 123 A MSE 124 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale6 covale both ? A MSE 125 C ? ? ? 1_555 A PRO 126 N ? ? A MSE 124 A PRO 125 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale7 covale both ? A TYR 130 C ? ? ? 1_555 A MSE 131 N ? ? A TYR 129 A MSE 130 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale8 covale both ? A MSE 131 C ? ? ? 1_555 A SER 132 N ? ? A MSE 130 A SER 131 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale9 covale both ? A SER 144 C ? ? ? 1_555 A MSE 145 N ? ? A SER 143 A MSE 144 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale10 covale both ? A MSE 145 C ? ? ? 1_555 A VAL 146 N ? ? A MSE 144 A VAL 145 1_555 ? ? ? ? ? ? ? 1.357 ? ? covale11 covale both ? B GLY 1 C ? ? ? 1_555 B MSE 2 N ? ? B GLY 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.357 ? ? covale12 covale both ? B MSE 2 C ? ? ? 1_555 B LEU 3 N ? ? B MSE 1 B LEU 2 1_555 ? ? ? ? ? ? ? 1.361 ? ? covale13 covale both ? B ASP 48 C ? ? ? 1_555 B MSE 49 N ? ? B ASP 47 B MSE 48 1_555 ? ? ? ? ? ? ? 1.367 ? ? covale14 covale both ? B MSE 49 C ? ? ? 1_555 B PHE 50 N ? ? B MSE 48 B PHE 49 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale15 covale both ? B SER 124 C ? ? ? 1_555 B MSE 125 N ? ? B SER 123 B MSE 124 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale16 covale both ? B MSE 125 C ? ? ? 1_555 B PRO 126 N ? ? B MSE 124 B PRO 125 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale17 covale both ? B TYR 130 C ? ? ? 1_555 B MSE 131 N ? ? B TYR 129 B MSE 130 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale18 covale both ? B MSE 131 C ? ? ? 1_555 B SER 132 N ? ? B MSE 130 B SER 131 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale19 covale both ? B SER 144 C ? ? ? 1_555 B MSE 145 N ? ? B SER 143 B MSE 144 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale20 covale both ? B MSE 145 C ? ? ? 1_555 B VAL 146 N ? ? B MSE 144 B VAL 145 1_555 ? ? ? ? ? ? ? 1.359 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 113 ? ALA A 118 ? ASN A 112 ALA A 117 A 2 LYS A 121 ? PRO A 126 ? LYS A 120 PRO A 125 B 1 ASN B 113 ? ALA B 118 ? ASN B 112 ALA B 117 B 2 LYS B 121 ? PRO B 126 ? LYS B 120 PRO B 125 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 114 ? N VAL A 113 O MSE A 125 ? O MSE A 124 B 1 2 N ALA B 118 ? N ALA B 117 O LYS B 121 ? O LYS B 120 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 178 ? 2 'BINDING SITE FOR RESIDUE CL A 178' AC2 Software A GOL 180 ? 8 'BINDING SITE FOR RESIDUE GOL A 180' AC3 Software A GOL 181 ? 5 'BINDING SITE FOR RESIDUE GOL A 181' AC4 Software B CL 177 ? 5 'BINDING SITE FOR RESIDUE CL B 177' AC5 Software B GOL 179 ? 6 'BINDING SITE FOR RESIDUE GOL B 179' AC6 Software B GOL 182 ? 5 'BINDING SITE FOR RESIDUE GOL B 182' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 MSE A 49 ? MSE A 48 . ? 1_555 ? 2 AC1 2 GLN A 55 ? GLN A 54 . ? 1_555 ? 3 AC2 8 LYS A 101 ? LYS A 100 . ? 3_655 ? 4 AC2 8 TYR A 147 ? TYR A 146 . ? 1_555 ? 5 AC2 8 LYS A 151 ? LYS A 150 . ? 1_555 ? 6 AC2 8 THR A 158 ? THR A 157 . ? 1_555 ? 7 AC2 8 LYS A 159 ? LYS A 158 . ? 1_555 ? 8 AC2 8 TYR A 168 ? TYR A 167 . ? 1_555 ? 9 AC2 8 MSE B 49 ? MSE B 48 . ? 1_555 ? 10 AC2 8 CL F . ? CL B 177 . ? 1_555 ? 11 AC3 5 SER A 4 ? SER A 3 . ? 1_555 ? 12 AC3 5 ARG A 5 ? ARG A 4 . ? 1_555 ? 13 AC3 5 LEU A 8 ? LEU A 7 . ? 1_555 ? 14 AC3 5 SER A 128 ? SER A 127 . ? 1_555 ? 15 AC3 5 LYS B 11 ? LYS B 10 . ? 1_555 ? 16 AC4 5 LYS A 101 ? LYS A 100 . ? 3_655 ? 17 AC4 5 GOL D . ? GOL A 180 . ? 1_555 ? 18 AC4 5 MSE B 49 ? MSE B 48 . ? 1_555 ? 19 AC4 5 PHE B 50 ? PHE B 49 . ? 1_555 ? 20 AC4 5 GLN B 55 ? GLN B 54 . ? 1_555 ? 21 AC5 6 MSE A 49 ? MSE A 48 . ? 1_555 ? 22 AC5 6 PHE A 141 ? PHE A 140 . ? 1_555 ? 23 AC5 6 TYR B 147 ? TYR B 146 . ? 1_555 ? 24 AC5 6 LYS B 151 ? LYS B 150 . ? 1_555 ? 25 AC5 6 THR B 158 ? THR B 157 . ? 1_555 ? 26 AC5 6 LYS B 159 ? LYS B 158 . ? 1_555 ? 27 AC6 5 LYS A 121 ? LYS A 120 . ? 4_555 ? 28 AC6 5 GLU A 122 ? GLU A 121 . ? 4_555 ? 29 AC6 5 LYS B 101 ? LYS B 100 . ? 1_555 ? 30 AC6 5 LEU B 102 ? LEU B 101 . ? 1_555 ? 31 AC6 5 SER B 103 ? SER B 102 . ? 1_555 ? # _atom_sites.entry_id 3QTH _atom_sites.fract_transf_matrix[1][1] 0.019189 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013329 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009862 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 LEU 3 2 2 LEU LEU A . n A 1 4 SER 4 3 3 SER SER A . n A 1 5 ARG 5 4 4 ARG ARG A . n A 1 6 ILE 6 5 5 ILE ILE A . n A 1 7 ASP 7 6 6 ASP ASP A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 TYR 9 8 8 TYR TYR A . n A 1 10 ILE 10 9 9 ILE ILE A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 HIS 12 11 11 HIS HIS A . n A 1 13 ARG 13 12 12 ARG ARG A . n A 1 14 ASP 14 13 13 ASP ASP A . n A 1 15 ILE 15 14 14 ILE ILE A . n A 1 16 PHE 16 15 15 PHE PHE A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 LYS 18 17 17 LYS LYS A . n A 1 19 HIS 19 18 18 HIS HIS A . n A 1 20 LEU 20 19 19 LEU LEU A . n A 1 21 GLU 21 20 20 GLU GLU A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 LEU 23 22 22 LEU LEU A . n A 1 24 HIS 24 23 23 HIS HIS A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 LYS 29 28 28 LYS LYS A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 GLU 31 30 30 GLU GLU A . n A 1 32 ASP 32 31 31 ASP ASP A . n A 1 33 SER 33 32 32 SER SER A . n A 1 34 SER 34 33 33 SER SER A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 ASN 36 35 35 ASN ASN A . n A 1 37 GLU 37 36 36 GLU GLU A . n A 1 38 SER 38 37 37 SER SER A . n A 1 39 GLU 39 38 38 GLU GLU A . n A 1 40 LEU 40 39 39 LEU LEU A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 ASN 42 41 41 ASN ASN A . n A 1 43 ALA 43 42 42 ALA ALA A . n A 1 44 ARG 44 43 43 ARG ARG A . n A 1 45 LEU 45 44 44 LEU LEU A . n A 1 46 VAL 46 45 45 VAL VAL A . n A 1 47 ASP 47 46 46 ASP ASP A . n A 1 48 ASP 48 47 47 ASP ASP A . n A 1 49 MSE 49 48 48 MSE MSE A . n A 1 50 PHE 50 49 49 PHE PHE A . n A 1 51 PRO 51 50 50 PRO PRO A . n A 1 52 PHE 52 51 51 PHE PHE A . n A 1 53 ASN 53 52 52 ASN ASN A . n A 1 54 VAL 54 53 53 VAL VAL A . n A 1 55 GLN 55 54 54 GLN GLN A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 LYS 57 56 56 LYS LYS A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 ALA 59 58 58 ALA ALA A . n A 1 60 THR 60 59 59 THR THR A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 PHE 62 61 61 PHE PHE A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 LEU 64 63 63 LEU LEU A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 ALA 66 65 65 ALA ALA A . n A 1 67 CYS 67 66 66 CYS CYS A . n A 1 68 CYS 68 67 67 CYS CYS A . n A 1 69 PRO 69 68 68 PRO PRO A . n A 1 70 LEU 70 69 69 LEU LEU A . n A 1 71 SER 71 70 70 SER SER A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 GLU 74 73 73 GLU GLU A . n A 1 75 TYR 75 74 74 TYR TYR A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 GLY 80 79 79 GLY GLY A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 SER 84 83 83 SER SER A . n A 1 85 PHE 85 84 84 PHE PHE A . n A 1 86 CYS 86 85 85 CYS CYS A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 THR 90 89 89 THR THR A . n A 1 91 TYR 91 90 90 TYR TYR A . n A 1 92 VAL 92 91 91 VAL VAL A . n A 1 93 VAL 93 92 92 VAL VAL A . n A 1 94 THR 94 93 93 THR THR A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 ILE 96 95 95 ILE ILE A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 TYR 98 97 97 TYR TYR A . n A 1 99 ILE 99 98 98 ILE ILE A . n A 1 100 ASN 100 99 99 ASN ASN A . n A 1 101 LYS 101 100 100 LYS LYS A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 SER 103 102 102 SER SER A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 PRO 105 104 104 PRO PRO A . n A 1 106 THR 106 105 105 THR THR A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 GLU 108 107 107 GLU GLU A . n A 1 109 GLN 109 108 108 GLN GLN A . n A 1 110 LEU 110 109 109 LEU LEU A . n A 1 111 ASN 111 110 110 ASN ASN A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 ASN 113 112 112 ASN ASN A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 ASP 116 115 115 ASP ASP A . n A 1 117 THR 117 116 116 THR THR A . n A 1 118 ALA 118 117 117 ALA ALA A . n A 1 119 GLY 119 118 118 GLY GLY A . n A 1 120 PHE 120 119 119 PHE PHE A . n A 1 121 LYS 121 120 120 LYS LYS A . n A 1 122 GLU 122 121 121 GLU GLU A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 SER 124 123 123 SER SER A . n A 1 125 MSE 125 124 124 MSE MSE A . n A 1 126 PRO 126 125 125 PRO PRO A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 GLU 129 128 128 GLU GLU A . n A 1 130 TYR 130 129 129 TYR TYR A . n A 1 131 MSE 131 130 130 MSE MSE A . n A 1 132 SER 132 131 131 SER SER A . n A 1 133 SER 133 132 132 SER SER A . n A 1 134 PHE 134 133 133 PHE PHE A . n A 1 135 VAL 135 134 134 VAL VAL A . n A 1 136 LEU 136 135 135 LEU LEU A . n A 1 137 PRO 137 136 136 PRO PRO A . n A 1 138 ASN 138 137 137 ASN ASN A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 PHE 140 139 139 PHE PHE A . n A 1 141 PHE 141 140 140 PHE PHE A . n A 1 142 HIS 142 141 141 HIS HIS A . n A 1 143 ILE 143 142 142 ILE ILE A . n A 1 144 SER 144 143 143 SER SER A . n A 1 145 MSE 145 144 144 MSE MSE A . n A 1 146 VAL 146 145 145 VAL VAL A . n A 1 147 TYR 147 146 146 TYR TYR A . n A 1 148 ALA 148 147 147 ALA ALA A . n A 1 149 ILE 149 148 148 ILE ILE A . n A 1 150 ALA 150 149 149 ALA ALA A . n A 1 151 LYS 151 150 150 LYS LYS A . n A 1 152 ASN 152 151 151 ASN ASN A . n A 1 153 ASN 153 152 152 ASN ASN A . n A 1 154 GLY 154 153 153 GLY GLY A . n A 1 155 VAL 155 154 154 VAL VAL A . n A 1 156 SER 156 155 155 SER SER A . n A 1 157 VAL 157 156 156 VAL VAL A . n A 1 158 THR 158 157 157 THR THR A . n A 1 159 LYS 159 158 158 LYS LYS A . n A 1 160 GLY 160 159 159 GLY GLY A . n A 1 161 ASP 161 160 160 ASP ASP A . n A 1 162 PHE 162 161 161 PHE PHE A . n A 1 163 ASP 163 162 162 ASP ASP A . n A 1 164 GLY 164 163 163 GLY GLY A . n A 1 165 ILE 165 164 164 ILE ILE A . n A 1 166 HIS 166 165 165 HIS HIS A . n A 1 167 GLN 167 166 166 GLN GLN A . n A 1 168 TYR 168 167 167 TYR TYR A . n A 1 169 PRO 169 168 168 PRO PRO A . n A 1 170 LYS 170 169 169 LYS LYS A . n A 1 171 GLY 171 170 170 GLY GLY A . n A 1 172 PHE 172 171 171 PHE PHE A . n A 1 173 SER 173 172 ? ? ? A . n A 1 174 TRP 174 173 ? ? ? A . n A 1 175 GLU 175 174 ? ? ? A . n A 1 176 ALA 176 175 ? ? ? A . n B 1 1 GLY 1 0 0 GLY GLY B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 LEU 3 2 2 LEU LEU B . n B 1 4 SER 4 3 3 SER SER B . n B 1 5 ARG 5 4 4 ARG ARG B . n B 1 6 ILE 6 5 5 ILE ILE B . n B 1 7 ASP 7 6 6 ASP ASP B . n B 1 8 LEU 8 7 7 LEU LEU B . n B 1 9 TYR 9 8 8 TYR TYR B . n B 1 10 ILE 10 9 9 ILE ILE B . n B 1 11 LYS 11 10 10 LYS LYS B . n B 1 12 HIS 12 11 11 HIS HIS B . n B 1 13 ARG 13 12 12 ARG ARG B . n B 1 14 ASP 14 13 13 ASP ASP B . n B 1 15 ILE 15 14 14 ILE ILE B . n B 1 16 PHE 16 15 15 PHE PHE B . n B 1 17 LEU 17 16 16 LEU LEU B . n B 1 18 LYS 18 17 17 LYS LYS B . n B 1 19 HIS 19 18 18 HIS HIS B . n B 1 20 LEU 20 19 19 LEU LEU B . n B 1 21 GLU 21 20 20 GLU GLU B . n B 1 22 LEU 22 21 21 LEU LEU B . n B 1 23 LEU 23 22 22 LEU LEU B . n B 1 24 HIS 24 23 23 HIS HIS B . n B 1 25 LYS 25 24 24 LYS LYS B . n B 1 26 LEU 26 25 25 LEU LEU B . n B 1 27 ILE 27 26 26 ILE ILE B . n B 1 28 GLU 28 27 27 GLU GLU B . n B 1 29 LYS 29 28 28 LYS LYS B . n B 1 30 VAL 30 29 29 VAL VAL B . n B 1 31 GLU 31 30 30 GLU GLU B . n B 1 32 ASP 32 31 31 ASP ASP B . n B 1 33 SER 33 32 32 SER SER B . n B 1 34 SER 34 33 33 SER SER B . n B 1 35 LEU 35 34 34 LEU LEU B . n B 1 36 ASN 36 35 35 ASN ASN B . n B 1 37 GLU 37 36 36 GLU GLU B . n B 1 38 SER 38 37 37 SER SER B . n B 1 39 GLU 39 38 38 GLU GLU B . n B 1 40 LEU 40 39 39 LEU LEU B . n B 1 41 LEU 41 40 40 LEU LEU B . n B 1 42 ASN 42 41 41 ASN ASN B . n B 1 43 ALA 43 42 42 ALA ALA B . n B 1 44 ARG 44 43 43 ARG ARG B . n B 1 45 LEU 45 44 44 LEU LEU B . n B 1 46 VAL 46 45 45 VAL VAL B . n B 1 47 ASP 47 46 46 ASP ASP B . n B 1 48 ASP 48 47 47 ASP ASP B . n B 1 49 MSE 49 48 48 MSE MSE B . n B 1 50 PHE 50 49 49 PHE PHE B . n B 1 51 PRO 51 50 50 PRO PRO B . n B 1 52 PHE 52 51 51 PHE PHE B . n B 1 53 ASN 53 52 52 ASN ASN B . n B 1 54 VAL 54 53 53 VAL VAL B . n B 1 55 GLN 55 54 54 GLN GLN B . n B 1 56 ALA 56 55 55 ALA ALA B . n B 1 57 LYS 57 56 56 LYS LYS B . n B 1 58 ILE 58 57 57 ILE ILE B . n B 1 59 ALA 59 58 58 ALA ALA B . n B 1 60 THR 60 59 59 THR THR B . n B 1 61 ASN 61 60 60 ASN ASN B . n B 1 62 PHE 62 61 61 PHE PHE B . n B 1 63 ALA 63 62 62 ALA ALA B . n B 1 64 LEU 64 63 63 LEU LEU B . n B 1 65 ARG 65 64 64 ARG ARG B . n B 1 66 ALA 66 65 65 ALA ALA B . n B 1 67 CYS 67 66 66 CYS CYS B . n B 1 68 CYS 68 67 67 CYS CYS B . n B 1 69 PRO 69 68 68 PRO PRO B . n B 1 70 LEU 70 69 ? ? ? B . n B 1 71 SER 71 70 ? ? ? B . n B 1 72 GLY 72 71 ? ? ? B . n B 1 73 LYS 73 72 ? ? ? B . n B 1 74 GLU 74 73 ? ? ? B . n B 1 75 TYR 75 74 ? ? ? B . n B 1 76 LYS 76 75 ? ? ? B . n B 1 77 GLU 77 76 ? ? ? B . n B 1 78 LEU 78 77 ? ? ? B . n B 1 79 GLU 79 78 78 GLU GLU B . n B 1 80 GLY 80 79 79 GLY GLY B . n B 1 81 ASP 81 80 80 ASP ASP B . n B 1 82 ILE 82 81 81 ILE ILE B . n B 1 83 ASP 83 82 82 ASP ASP B . n B 1 84 SER 84 83 83 SER SER B . n B 1 85 PHE 85 84 84 PHE PHE B . n B 1 86 CYS 86 85 85 CYS CYS B . n B 1 87 GLY 87 86 86 GLY GLY B . n B 1 88 LEU 88 87 87 LEU LEU B . n B 1 89 LYS 89 88 88 LYS LYS B . n B 1 90 THR 90 89 89 THR THR B . n B 1 91 TYR 91 90 90 TYR TYR B . n B 1 92 VAL 92 91 91 VAL VAL B . n B 1 93 VAL 93 92 92 VAL VAL B . n B 1 94 THR 94 93 93 THR THR B . n B 1 95 ALA 95 94 94 ALA ALA B . n B 1 96 ILE 96 95 95 ILE ILE B . n B 1 97 ASP 97 96 96 ASP ASP B . n B 1 98 TYR 98 97 97 TYR TYR B . n B 1 99 ILE 99 98 98 ILE ILE B . n B 1 100 ASN 100 99 99 ASN ASN B . n B 1 101 LYS 101 100 100 LYS LYS B . n B 1 102 LEU 102 101 101 LEU LEU B . n B 1 103 SER 103 102 102 SER SER B . n B 1 104 GLU 104 103 103 GLU GLU B . n B 1 105 PRO 105 104 104 PRO PRO B . n B 1 106 THR 106 105 105 THR THR B . n B 1 107 LEU 107 106 106 LEU LEU B . n B 1 108 GLU 108 107 107 GLU GLU B . n B 1 109 GLN 109 108 108 GLN GLN B . n B 1 110 LEU 110 109 109 LEU LEU B . n B 1 111 ASN 111 110 110 ASN ASN B . n B 1 112 LEU 112 111 111 LEU LEU B . n B 1 113 ASN 113 112 112 ASN ASN B . n B 1 114 VAL 114 113 113 VAL VAL B . n B 1 115 GLN 115 114 114 GLN GLN B . n B 1 116 ASP 116 115 115 ASP ASP B . n B 1 117 THR 117 116 116 THR THR B . n B 1 118 ALA 118 117 117 ALA ALA B . n B 1 119 GLY 119 118 118 GLY GLY B . n B 1 120 PHE 120 119 119 PHE PHE B . n B 1 121 LYS 121 120 120 LYS LYS B . n B 1 122 GLU 122 121 121 GLU GLU B . n B 1 123 ILE 123 122 122 ILE ILE B . n B 1 124 SER 124 123 123 SER SER B . n B 1 125 MSE 125 124 124 MSE MSE B . n B 1 126 PRO 126 125 125 PRO PRO B . n B 1 127 ALA 127 126 126 ALA ALA B . n B 1 128 SER 128 127 127 SER SER B . n B 1 129 GLU 129 128 128 GLU GLU B . n B 1 130 TYR 130 129 129 TYR TYR B . n B 1 131 MSE 131 130 130 MSE MSE B . n B 1 132 SER 132 131 131 SER SER B . n B 1 133 SER 133 132 132 SER SER B . n B 1 134 PHE 134 133 133 PHE PHE B . n B 1 135 VAL 135 134 134 VAL VAL B . n B 1 136 LEU 136 135 135 LEU LEU B . n B 1 137 PRO 137 136 136 PRO PRO B . n B 1 138 ASN 138 137 137 ASN ASN B . n B 1 139 PHE 139 138 138 PHE PHE B . n B 1 140 PHE 140 139 139 PHE PHE B . n B 1 141 PHE 141 140 140 PHE PHE B . n B 1 142 HIS 142 141 141 HIS HIS B . n B 1 143 ILE 143 142 142 ILE ILE B . n B 1 144 SER 144 143 143 SER SER B . n B 1 145 MSE 145 144 144 MSE MSE B . n B 1 146 VAL 146 145 145 VAL VAL B . n B 1 147 TYR 147 146 146 TYR TYR B . n B 1 148 ALA 148 147 147 ALA ALA B . n B 1 149 ILE 149 148 148 ILE ILE B . n B 1 150 ALA 150 149 149 ALA ALA B . n B 1 151 LYS 151 150 150 LYS LYS B . n B 1 152 ASN 152 151 151 ASN ASN B . n B 1 153 ASN 153 152 152 ASN ASN B . n B 1 154 GLY 154 153 153 GLY GLY B . n B 1 155 VAL 155 154 154 VAL VAL B . n B 1 156 SER 156 155 155 SER SER B . n B 1 157 VAL 157 156 156 VAL VAL B . n B 1 158 THR 158 157 157 THR THR B . n B 1 159 LYS 159 158 158 LYS LYS B . n B 1 160 GLY 160 159 159 GLY GLY B . n B 1 161 ASP 161 160 160 ASP ASP B . n B 1 162 PHE 162 161 161 PHE PHE B . n B 1 163 ASP 163 162 162 ASP ASP B . n B 1 164 GLY 164 163 163 GLY GLY B . n B 1 165 ILE 165 164 164 ILE ILE B . n B 1 166 HIS 166 165 165 HIS HIS B . n B 1 167 GLN 167 166 166 GLN GLN B . n B 1 168 TYR 168 167 167 TYR TYR B . n B 1 169 PRO 169 168 168 PRO PRO B . n B 1 170 LYS 170 169 169 LYS LYS B . n B 1 171 GLY 171 170 170 GLY GLY B . n B 1 172 PHE 172 171 171 PHE PHE B . n B 1 173 SER 173 172 172 SER SER B . n B 1 174 TRP 174 173 ? ? ? B . n B 1 175 GLU 175 174 ? ? ? B . n B 1 176 ALA 176 175 ? ? ? B . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 178 178 CL CL A . D 3 GOL 1 180 180 GOL GOL A . E 3 GOL 1 181 181 GOL GOL A . F 2 CL 1 177 177 CL CL B . G 3 GOL 1 179 179 GOL GOL B . H 3 GOL 1 182 182 GOL GOL B . I 4 HOH 1 183 183 HOH HOH A . I 4 HOH 2 184 184 HOH HOH A . I 4 HOH 3 186 186 HOH HOH A . I 4 HOH 4 189 189 HOH HOH A . I 4 HOH 5 190 190 HOH HOH A . I 4 HOH 6 191 191 HOH HOH A . I 4 HOH 7 192 192 HOH HOH A . I 4 HOH 8 193 193 HOH HOH A . I 4 HOH 9 194 194 HOH HOH A . I 4 HOH 10 195 195 HOH HOH A . I 4 HOH 11 196 196 HOH HOH A . I 4 HOH 12 197 197 HOH HOH A . I 4 HOH 13 202 202 HOH HOH A . I 4 HOH 14 203 203 HOH HOH A . I 4 HOH 15 205 205 HOH HOH A . I 4 HOH 16 206 206 HOH HOH A . I 4 HOH 17 207 207 HOH HOH A . I 4 HOH 18 208 208 HOH HOH A . I 4 HOH 19 209 209 HOH HOH A . I 4 HOH 20 210 210 HOH HOH A . I 4 HOH 21 211 211 HOH HOH A . I 4 HOH 22 212 212 HOH HOH A . I 4 HOH 23 213 213 HOH HOH A . I 4 HOH 24 214 214 HOH HOH A . I 4 HOH 25 215 215 HOH HOH A . I 4 HOH 26 216 216 HOH HOH A . I 4 HOH 27 217 217 HOH HOH A . I 4 HOH 28 218 218 HOH HOH A . I 4 HOH 29 220 220 HOH HOH A . I 4 HOH 30 221 221 HOH HOH A . I 4 HOH 31 222 222 HOH HOH A . I 4 HOH 32 233 233 HOH HOH A . I 4 HOH 33 234 234 HOH HOH A . I 4 HOH 34 235 235 HOH HOH A . I 4 HOH 35 236 236 HOH HOH A . I 4 HOH 36 238 238 HOH HOH A . I 4 HOH 37 239 239 HOH HOH A . I 4 HOH 38 240 240 HOH HOH A . I 4 HOH 39 242 242 HOH HOH A . I 4 HOH 40 243 243 HOH HOH A . I 4 HOH 41 244 244 HOH HOH A . I 4 HOH 42 245 245 HOH HOH A . I 4 HOH 43 246 246 HOH HOH A . I 4 HOH 44 256 256 HOH HOH A . I 4 HOH 45 257 257 HOH HOH A . I 4 HOH 46 262 262 HOH HOH A . I 4 HOH 47 264 264 HOH HOH A . I 4 HOH 48 269 269 HOH HOH A . I 4 HOH 49 270 270 HOH HOH A . J 4 HOH 1 185 185 HOH HOH B . J 4 HOH 2 187 187 HOH HOH B . J 4 HOH 3 188 188 HOH HOH B . J 4 HOH 4 198 198 HOH HOH B . J 4 HOH 5 199 199 HOH HOH B . J 4 HOH 6 200 200 HOH HOH B . J 4 HOH 7 201 201 HOH HOH B . J 4 HOH 8 204 204 HOH HOH B . J 4 HOH 9 219 219 HOH HOH B . J 4 HOH 10 223 223 HOH HOH B . J 4 HOH 11 224 224 HOH HOH B . J 4 HOH 12 225 225 HOH HOH B . J 4 HOH 13 226 226 HOH HOH B . J 4 HOH 14 227 227 HOH HOH B . J 4 HOH 15 228 228 HOH HOH B . J 4 HOH 16 229 229 HOH HOH B . J 4 HOH 17 230 230 HOH HOH B . J 4 HOH 18 231 231 HOH HOH B . J 4 HOH 19 232 232 HOH HOH B . J 4 HOH 20 237 237 HOH HOH B . J 4 HOH 21 241 241 HOH HOH B . J 4 HOH 22 247 247 HOH HOH B . J 4 HOH 23 248 248 HOH HOH B . J 4 HOH 24 250 250 HOH HOH B . J 4 HOH 25 251 251 HOH HOH B . J 4 HOH 26 252 252 HOH HOH B . J 4 HOH 27 253 253 HOH HOH B . J 4 HOH 28 254 254 HOH HOH B . J 4 HOH 29 255 255 HOH HOH B . J 4 HOH 30 258 258 HOH HOH B . J 4 HOH 31 259 259 HOH HOH B . J 4 HOH 32 260 260 HOH HOH B . J 4 HOH 33 261 261 HOH HOH B . J 4 HOH 34 263 263 HOH HOH B . J 4 HOH 35 265 265 HOH HOH B . J 4 HOH 36 266 266 HOH HOH B . J 4 HOH 37 267 267 HOH HOH B . J 4 HOH 38 268 268 HOH HOH B . J 4 HOH 39 271 271 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 49 A MSE 48 ? MET SELENOMETHIONINE 3 A MSE 125 A MSE 124 ? MET SELENOMETHIONINE 4 A MSE 131 A MSE 130 ? MET SELENOMETHIONINE 5 A MSE 145 A MSE 144 ? MET SELENOMETHIONINE 6 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 7 B MSE 49 B MSE 48 ? MET SELENOMETHIONINE 8 B MSE 125 B MSE 124 ? MET SELENOMETHIONINE 9 B MSE 131 B MSE 130 ? MET SELENOMETHIONINE 10 B MSE 145 B MSE 144 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5090 ? 1 MORE -55 ? 1 'SSA (A^2)' 14780 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-07-20 4 'Structure model' 1 3 2014-12-24 5 'Structure model' 1 4 2017-11-08 6 'Structure model' 1 5 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Refinement description' 5 6 'Structure model' 'Database references' 6 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' database_2 3 6 'Structure model' struct_conn 4 6 'Structure model' struct_ref_seq_dif 5 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' 7 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 19.5661 11.0863 22.0017 0.0141 -0.1091 -0.1603 0.0461 -0.0091 0.0075 1.4214 2.4628 1.6078 0.2668 0.0276 -0.3623 0.0376 0.0091 -0.0467 -0.1696 -0.0090 0.0642 0.1880 0.0590 -0.0012 'X-RAY DIFFRACTION' 2 ? refined 15.2348 27.7577 12.9501 -0.0200 -0.1271 -0.0677 0.0567 -0.0019 -0.0135 1.5733 1.5842 1.8019 0.5162 0.3304 0.2009 -0.0396 0.0134 0.0262 -0.0450 0.4398 0.1759 0.0242 -0.2531 -0.0844 # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.pdbx_refine_id 1 1 ? ? ? ? ? ? ? ? ? 'chain A' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain B' 'X-RAY DIFFRACTION' # _phasing.method SAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 SCALA 3.3.15 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 5 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 6 BUSTER 2.8.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.entry_id 3QTH _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id PHE _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 171 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -145.53 _pdbx_validate_torsion.psi -136.10 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 32 ? OG ? A SER 33 OG 2 1 Y 1 A GLU 38 ? CG ? A GLU 39 CG 3 1 Y 1 A GLU 38 ? CD ? A GLU 39 CD 4 1 Y 1 A GLU 38 ? OE1 ? A GLU 39 OE1 5 1 Y 1 A GLU 38 ? OE2 ? A GLU 39 OE2 6 1 Y 1 A LEU 39 ? CG ? A LEU 40 CG 7 1 Y 1 A LEU 39 ? CD1 ? A LEU 40 CD1 8 1 Y 1 A LEU 39 ? CD2 ? A LEU 40 CD2 9 1 Y 1 A LYS 75 ? CG ? A LYS 76 CG 10 1 Y 1 A LYS 75 ? CD ? A LYS 76 CD 11 1 Y 1 A LYS 75 ? CE ? A LYS 76 CE 12 1 Y 1 A LYS 75 ? NZ ? A LYS 76 NZ 13 1 Y 1 A GLU 103 ? CG ? A GLU 104 CG 14 1 Y 1 A GLU 103 ? CD ? A GLU 104 CD 15 1 Y 1 A GLU 103 ? OE1 ? A GLU 104 OE1 16 1 Y 1 A GLU 103 ? OE2 ? A GLU 104 OE2 17 1 Y 1 A GLU 107 ? CG ? A GLU 108 CG 18 1 Y 1 A GLU 107 ? CD ? A GLU 108 CD 19 1 Y 1 A GLU 107 ? OE1 ? A GLU 108 OE1 20 1 Y 1 A GLU 107 ? OE2 ? A GLU 108 OE2 21 1 Y 1 A GLU 121 ? CG ? A GLU 122 CG 22 1 Y 1 A GLU 121 ? CD ? A GLU 122 CD 23 1 Y 1 A GLU 121 ? OE1 ? A GLU 122 OE1 24 1 Y 1 A GLU 121 ? OE2 ? A GLU 122 OE2 25 1 Y 1 A LYS 150 ? NZ ? A LYS 151 NZ 26 1 Y 1 A LYS 169 ? CD ? A LYS 170 CD 27 1 Y 1 A LYS 169 ? CE ? A LYS 170 CE 28 1 Y 1 A LYS 169 ? NZ ? A LYS 170 NZ 29 1 Y 1 B ASP 31 ? CG ? B ASP 32 CG 30 1 Y 1 B ASP 31 ? OD1 ? B ASP 32 OD1 31 1 Y 1 B ASP 31 ? OD2 ? B ASP 32 OD2 32 1 Y 1 B LEU 34 ? CG ? B LEU 35 CG 33 1 Y 1 B LEU 34 ? CD1 ? B LEU 35 CD1 34 1 Y 1 B LEU 34 ? CD2 ? B LEU 35 CD2 35 1 Y 1 B GLU 38 ? CG ? B GLU 39 CG 36 1 Y 1 B GLU 38 ? CD ? B GLU 39 CD 37 1 Y 1 B GLU 38 ? OE1 ? B GLU 39 OE1 38 1 Y 1 B GLU 38 ? OE2 ? B GLU 39 OE2 39 1 Y 1 B VAL 45 ? CG1 ? B VAL 46 CG1 40 1 Y 1 B VAL 45 ? CG2 ? B VAL 46 CG2 41 1 Y 1 B LYS 56 ? NZ ? B LYS 57 NZ 42 1 Y 1 B GLU 78 ? CG ? B GLU 79 CG 43 1 Y 1 B GLU 78 ? CD ? B GLU 79 CD 44 1 Y 1 B GLU 78 ? OE1 ? B GLU 79 OE1 45 1 Y 1 B GLU 78 ? OE2 ? B GLU 79 OE2 46 1 Y 1 B LYS 100 ? NZ ? B LYS 101 NZ 47 1 Y 1 B LYS 120 ? CE ? B LYS 121 CE 48 1 Y 1 B LYS 120 ? NZ ? B LYS 121 NZ 49 1 Y 1 B LYS 169 ? CG ? B LYS 170 CG 50 1 Y 1 B LYS 169 ? CD ? B LYS 170 CD 51 1 Y 1 B LYS 169 ? CE ? B LYS 170 CE 52 1 Y 1 B LYS 169 ? NZ ? B LYS 170 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 172 ? A SER 173 2 1 Y 1 A TRP 173 ? A TRP 174 3 1 Y 1 A GLU 174 ? A GLU 175 4 1 Y 1 A ALA 175 ? A ALA 176 5 1 Y 1 B LEU 69 ? B LEU 70 6 1 Y 1 B SER 70 ? B SER 71 7 1 Y 1 B GLY 71 ? B GLY 72 8 1 Y 1 B LYS 72 ? B LYS 73 9 1 Y 1 B GLU 73 ? B GLU 74 10 1 Y 1 B TYR 74 ? B TYR 75 11 1 Y 1 B LYS 75 ? B LYS 76 12 1 Y 1 B GLU 76 ? B GLU 77 13 1 Y 1 B LEU 77 ? B LEU 78 14 1 Y 1 B TRP 173 ? B TRP 174 15 1 Y 1 B GLU 174 ? B GLU 175 16 1 Y 1 B ALA 175 ? B ALA 176 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 GLYCEROL GOL 4 water HOH #