data_3QY3 # _entry.id 3QY3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3QY3 RCSB RCSB064248 WWPDB D_1000064248 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2011-03-16 _pdbx_database_PDB_obs_spr.pdb_id 3QY3 _pdbx_database_PDB_obs_spr.replace_pdb_id 2ALI _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC5055 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3QY3 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-03-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Osipiuk, J.' 1 'Xu, X.' 2 'Savchenko, A.' 3 'Edwards, A.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Structure and activity of the Pseudomonas aeruginosa hotdog-fold thioesterases PA5202 and PA2801.' _citation.journal_abbrev Biochem.J. _citation.journal_volume 444 _citation.page_first 445 _citation.page_last 455 _citation.year 2012 _citation.journal_id_ASTM BIJOAK _citation.country UK _citation.journal_id_ISSN 0264-6021 _citation.journal_id_CSD 0043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22439787 _citation.pdbx_database_id_DOI 10.1042/BJ20112032 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Gonzalez, C.F.' 1 primary 'Tchigvintsev, A.' 2 primary 'Brown, G.' 3 primary 'Flick, R.' 4 primary 'Evdokimova, E.' 5 primary 'Xu, X.' 6 primary 'Osipiuk, J.' 7 primary 'Cuff, M.E.' 8 primary 'Lynch, S.' 9 primary 'Joachimiak, A.' 10 primary 'Savchenko, A.' 11 primary 'Yakunin, A.F.' 12 # _cell.length_a 53.816 _cell.length_b 58.907 _cell.length_c 85.509 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3QY3 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.entry_id 3QY3 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 23 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Thioesterase 17852.492 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 water nat water 18.015 103 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGRENLYFQGH(MSE)ADRQLLHTAHIPVRWGD(MSE)DSYGHVNNTLYFQYLEEARVAWFETLG IDLEGAAEGPVVLQSLHTYLKPVVHPATVVVELYAGRLGTSSLVLEHRLHTLEDPQGTYGEGHCKLVWVRHAENRSTPVP DSIRAAIAGS ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGRENLYFQGHMADRQLLHTAHIPVRWGDMDSYGHVNNTLYFQYLEEARVAWFETLGIDLEGAAEGPVV LQSLHTYLKPVVHPATVVVELYAGRLGTSSLVLEHRLHTLEDPQGTYGEGHCKLVWVRHAENRSTPVPDSIRAAIAGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC5055 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 ARG n 1 15 GLU n 1 16 ASN n 1 17 LEU n 1 18 TYR n 1 19 PHE n 1 20 GLN n 1 21 GLY n 1 22 HIS n 1 23 MSE n 1 24 ALA n 1 25 ASP n 1 26 ARG n 1 27 GLN n 1 28 LEU n 1 29 LEU n 1 30 HIS n 1 31 THR n 1 32 ALA n 1 33 HIS n 1 34 ILE n 1 35 PRO n 1 36 VAL n 1 37 ARG n 1 38 TRP n 1 39 GLY n 1 40 ASP n 1 41 MSE n 1 42 ASP n 1 43 SER n 1 44 TYR n 1 45 GLY n 1 46 HIS n 1 47 VAL n 1 48 ASN n 1 49 ASN n 1 50 THR n 1 51 LEU n 1 52 TYR n 1 53 PHE n 1 54 GLN n 1 55 TYR n 1 56 LEU n 1 57 GLU n 1 58 GLU n 1 59 ALA n 1 60 ARG n 1 61 VAL n 1 62 ALA n 1 63 TRP n 1 64 PHE n 1 65 GLU n 1 66 THR n 1 67 LEU n 1 68 GLY n 1 69 ILE n 1 70 ASP n 1 71 LEU n 1 72 GLU n 1 73 GLY n 1 74 ALA n 1 75 ALA n 1 76 GLU n 1 77 GLY n 1 78 PRO n 1 79 VAL n 1 80 VAL n 1 81 LEU n 1 82 GLN n 1 83 SER n 1 84 LEU n 1 85 HIS n 1 86 THR n 1 87 TYR n 1 88 LEU n 1 89 LYS n 1 90 PRO n 1 91 VAL n 1 92 VAL n 1 93 HIS n 1 94 PRO n 1 95 ALA n 1 96 THR n 1 97 VAL n 1 98 VAL n 1 99 VAL n 1 100 GLU n 1 101 LEU n 1 102 TYR n 1 103 ALA n 1 104 GLY n 1 105 ARG n 1 106 LEU n 1 107 GLY n 1 108 THR n 1 109 SER n 1 110 SER n 1 111 LEU n 1 112 VAL n 1 113 LEU n 1 114 GLU n 1 115 HIS n 1 116 ARG n 1 117 LEU n 1 118 HIS n 1 119 THR n 1 120 LEU n 1 121 GLU n 1 122 ASP n 1 123 PRO n 1 124 GLN n 1 125 GLY n 1 126 THR n 1 127 TYR n 1 128 GLY n 1 129 GLU n 1 130 GLY n 1 131 HIS n 1 132 CYS n 1 133 LYS n 1 134 LEU n 1 135 VAL n 1 136 TRP n 1 137 VAL n 1 138 ARG n 1 139 HIS n 1 140 ALA n 1 141 GLU n 1 142 ASN n 1 143 ARG n 1 144 SER n 1 145 THR n 1 146 PRO n 1 147 VAL n 1 148 PRO n 1 149 ASP n 1 150 SER n 1 151 ILE n 1 152 ARG n 1 153 ALA n 1 154 ALA n 1 155 ILE n 1 156 ALA n 1 157 GLY n 1 158 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PA2801 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PAO1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET15B modified' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9I042_PSEAE _struct_ref.pdbx_db_accession Q9I042 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MADRQLLHTAHIPVRWGDMDSYGHVNNTLYFQYLEEARVAWFETLGIDLEGAAEGPVVLQSLHTYLKPVVHPATVVVELY AGRLGTSSLVLEHRLHTLEDPQGTYGEGHCKLVWVRHAENRSTPVPDSIRAAIA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3QY3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 23 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 156 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9I042 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 134 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 134 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3QY3 MSE A 1 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -21 1 1 3QY3 GLY A 2 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -20 2 1 3QY3 SER A 3 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -19 3 1 3QY3 SER A 4 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -18 4 1 3QY3 HIS A 5 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -17 5 1 3QY3 HIS A 6 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -16 6 1 3QY3 HIS A 7 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -15 7 1 3QY3 HIS A 8 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -14 8 1 3QY3 HIS A 9 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -13 9 1 3QY3 HIS A 10 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -12 10 1 3QY3 SER A 11 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -11 11 1 3QY3 SER A 12 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -10 12 1 3QY3 GLY A 13 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -9 13 1 3QY3 ARG A 14 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -8 14 1 3QY3 GLU A 15 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -7 15 1 3QY3 ASN A 16 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -6 16 1 3QY3 LEU A 17 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -5 17 1 3QY3 TYR A 18 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -4 18 1 3QY3 PHE A 19 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -3 19 1 3QY3 GLN A 20 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -2 20 1 3QY3 GLY A 21 ? UNP Q9I042 ? ? 'EXPRESSION TAG' -1 21 1 3QY3 HIS A 22 ? UNP Q9I042 ? ? 'EXPRESSION TAG' 0 22 1 3QY3 GLY A 157 ? UNP Q9I042 ? ? 'EXPRESSION TAG' 135 23 1 3QY3 SER A 158 ? UNP Q9I042 ? ? 'EXPRESSION TAG' 136 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 _exptl.entry_id 3QY3 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.900 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 35.300 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.2 M CALCIUM CHLORIDE, 25% PEG 3350, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-06-20 _diffrn_detector.diffrn_id 1 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97950 1.0 2 0.9795 1.0 # _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength 0.97950 _diffrn_source.diffrn_id 1 _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 3QY3 _reflns.d_resolution_high 1.750 _reflns.d_resolution_low 39.7 _reflns.number_obs 13809 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_netI_over_sigmaI 47.700 _reflns.pdbx_redundancy 8.700 _reflns.percent_possible_obs 98.000 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F 0 _reflns.number_all 13809 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 35.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.750 _reflns_shell.d_res_low 1.800 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.549 _reflns_shell.meanI_over_sigI_obs 1.900 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 3.600 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 854 _reflns_shell.percent_possible_all 79.700 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3QY3 _refine.ls_d_res_high 1.7500 _refine.ls_d_res_low 39.7 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.9800 _refine.ls_number_reflns_obs 13809 _refine.ls_number_reflns_all 13809 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.ls_R_factor_all 0.1694 _refine.ls_R_factor_obs 0.1694 _refine.ls_R_factor_R_work 0.1653 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2076 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_number_reflns_R_free 1375 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 32.3292 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.2400 _refine.aniso_B[2][2] 1.1300 _refine.aniso_B[3][3] -1.3700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9690 _refine.correlation_coeff_Fo_to_Fc_free 0.9510 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1160 _refine.overall_SU_ML 0.0690 _refine.overall_SU_B 4.7040 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 98.800 _refine.B_iso_min 9.900 _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.117 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1026 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 1130 _refine_hist.d_res_high 1.7500 _refine_hist.d_res_low 39.7 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1104 0.019 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 719 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1523 1.681 1.937 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 1759 0.940 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 144 5.832 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 52 38.189 22.885 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 171 14.992 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8 12.722 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 173 0.115 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1250 0.008 0.021 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 231 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 670 1.056 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 270 0.332 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1094 1.866 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 434 2.843 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 421 4.430 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.7490 _refine_ls_shell.d_res_low 1.7950 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 79.6100 _refine_ls_shell.number_reflns_R_work 744 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.3370 _refine_ls_shell.R_factor_R_free 0.4920 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 812 _refine_ls_shell.number_reflns_obs 812 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3QY3 _struct.title 'PA2801 protein, a putative Thioesterase from Pseudomonas aeruginosa' _struct.pdbx_descriptor Thioesterase _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QY3 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 37 ? MSE A 41 ? ARG A 15 MSE A 19 5 ? 5 HELX_P HELX_P2 2 THR A 50 ? LEU A 67 ? THR A 28 LEU A 45 1 ? 18 HELX_P HELX_P3 3 PRO A 148 ? ALA A 156 ? PRO A 126 ALA A 134 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASP 40 C ? ? ? 1_555 A MSE 41 N ? ? A ASP 18 A MSE 19 1_555 ? ? ? ? ? ? ? 1.350 ? covale2 covale ? ? A MSE 41 C ? ? ? 1_555 A ASP 42 N ? ? A MSE 19 A ASP 20 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 93 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 71 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 94 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 72 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.53 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 28 ? PRO A 35 ? LEU A 6 PRO A 13 A 2 THR A 96 ? LEU A 106 ? THR A 74 LEU A 84 A 3 SER A 110 ? THR A 119 ? SER A 88 THR A 97 A 4 GLY A 128 ? ARG A 138 ? GLY A 106 ARG A 116 A 5 GLU A 76 ? TYR A 87 ? GLU A 54 TYR A 65 B 1 LEU A 28 ? PRO A 35 ? LEU A 6 PRO A 13 B 2 THR A 96 ? LEU A 106 ? THR A 74 LEU A 84 B 3 SER A 110 ? THR A 119 ? SER A 88 THR A 97 B 4 GLY A 128 ? ARG A 138 ? GLY A 106 ARG A 116 B 5 ARG A 143 ? SER A 144 ? ARG A 121 SER A 122 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 34 ? N ILE A 12 O VAL A 97 ? O VAL A 75 A 2 3 N TYR A 102 ? N TYR A 80 O GLU A 114 ? O GLU A 92 A 3 4 N LEU A 111 ? N LEU A 89 O LEU A 134 ? O LEU A 112 A 4 5 O HIS A 131 ? O HIS A 109 N LEU A 84 ? N LEU A 62 B 1 2 N ILE A 34 ? N ILE A 12 O VAL A 97 ? O VAL A 75 B 2 3 N TYR A 102 ? N TYR A 80 O GLU A 114 ? O GLU A 92 B 3 4 N LEU A 111 ? N LEU A 89 O LEU A 134 ? O LEU A 112 B 4 5 N ARG A 138 ? N ARG A 116 O ARG A 143 ? O ARG A 121 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE CL A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ALA A 95 ? ALA A 73 . ? 1_555 ? 2 AC1 4 THR A 96 ? THR A 74 . ? 1_555 ? 3 AC1 4 LEU A 120 ? LEU A 98 . ? 1_555 ? 4 AC1 4 GLU A 121 ? GLU A 99 . ? 1_555 ? # _atom_sites.entry_id 3QY3 _atom_sites.fract_transf_matrix[1][1] 0.018582 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016976 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011695 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -21 ? ? ? A . n A 1 2 GLY 2 -20 ? ? ? A . n A 1 3 SER 3 -19 ? ? ? A . n A 1 4 SER 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 HIS 8 -14 ? ? ? A . n A 1 9 HIS 9 -13 ? ? ? A . n A 1 10 HIS 10 -12 ? ? ? A . n A 1 11 SER 11 -11 ? ? ? A . n A 1 12 SER 12 -10 ? ? ? A . n A 1 13 GLY 13 -9 ? ? ? A . n A 1 14 ARG 14 -8 ? ? ? A . n A 1 15 GLU 15 -7 ? ? ? A . n A 1 16 ASN 16 -6 ? ? ? A . n A 1 17 LEU 17 -5 ? ? ? A . n A 1 18 TYR 18 -4 ? ? ? A . n A 1 19 PHE 19 -3 ? ? ? A . n A 1 20 GLN 20 -2 ? ? ? A . n A 1 21 GLY 21 -1 ? ? ? A . n A 1 22 HIS 22 0 ? ? ? A . n A 1 23 MSE 23 1 ? ? ? A . n A 1 24 ALA 24 2 ? ? ? A . n A 1 25 ASP 25 3 ? ? ? A . n A 1 26 ARG 26 4 ? ? ? A . n A 1 27 GLN 27 5 5 GLN GLN A . n A 1 28 LEU 28 6 6 LEU LEU A . n A 1 29 LEU 29 7 7 LEU LEU A . n A 1 30 HIS 30 8 8 HIS HIS A . n A 1 31 THR 31 9 9 THR THR A . n A 1 32 ALA 32 10 10 ALA ALA A . n A 1 33 HIS 33 11 11 HIS HIS A . n A 1 34 ILE 34 12 12 ILE ILE A . n A 1 35 PRO 35 13 13 PRO PRO A . n A 1 36 VAL 36 14 14 VAL VAL A . n A 1 37 ARG 37 15 15 ARG ARG A . n A 1 38 TRP 38 16 16 TRP TRP A . n A 1 39 GLY 39 17 17 GLY GLY A . n A 1 40 ASP 40 18 18 ASP ASP A . n A 1 41 MSE 41 19 19 MSE MSE A . n A 1 42 ASP 42 20 20 ASP ASP A . n A 1 43 SER 43 21 21 SER SER A . n A 1 44 TYR 44 22 22 TYR TYR A . n A 1 45 GLY 45 23 23 GLY GLY A . n A 1 46 HIS 46 24 24 HIS HIS A . n A 1 47 VAL 47 25 25 VAL VAL A . n A 1 48 ASN 48 26 26 ASN ASN A . n A 1 49 ASN 49 27 27 ASN ASN A . n A 1 50 THR 50 28 28 THR THR A . n A 1 51 LEU 51 29 29 LEU LEU A . n A 1 52 TYR 52 30 30 TYR TYR A . n A 1 53 PHE 53 31 31 PHE PHE A . n A 1 54 GLN 54 32 32 GLN GLN A . n A 1 55 TYR 55 33 33 TYR TYR A . n A 1 56 LEU 56 34 34 LEU LEU A . n A 1 57 GLU 57 35 35 GLU GLU A . n A 1 58 GLU 58 36 36 GLU GLU A . n A 1 59 ALA 59 37 37 ALA ALA A . n A 1 60 ARG 60 38 38 ARG ARG A . n A 1 61 VAL 61 39 39 VAL VAL A . n A 1 62 ALA 62 40 40 ALA ALA A . n A 1 63 TRP 63 41 41 TRP TRP A . n A 1 64 PHE 64 42 42 PHE PHE A . n A 1 65 GLU 65 43 43 GLU GLU A . n A 1 66 THR 66 44 44 THR THR A . n A 1 67 LEU 67 45 45 LEU LEU A . n A 1 68 GLY 68 46 46 GLY GLY A . n A 1 69 ILE 69 47 47 ILE ILE A . n A 1 70 ASP 70 48 48 ASP ASP A . n A 1 71 LEU 71 49 49 LEU LEU A . n A 1 72 GLU 72 50 50 GLU GLU A . n A 1 73 GLY 73 51 51 GLY GLY A . n A 1 74 ALA 74 52 52 ALA ALA A . n A 1 75 ALA 75 53 53 ALA ALA A . n A 1 76 GLU 76 54 54 GLU GLU A . n A 1 77 GLY 77 55 55 GLY GLY A . n A 1 78 PRO 78 56 56 PRO PRO A . n A 1 79 VAL 79 57 57 VAL VAL A . n A 1 80 VAL 80 58 58 VAL VAL A . n A 1 81 LEU 81 59 59 LEU LEU A . n A 1 82 GLN 82 60 60 GLN GLN A . n A 1 83 SER 83 61 61 SER SER A . n A 1 84 LEU 84 62 62 LEU LEU A . n A 1 85 HIS 85 63 63 HIS HIS A . n A 1 86 THR 86 64 64 THR THR A . n A 1 87 TYR 87 65 65 TYR TYR A . n A 1 88 LEU 88 66 66 LEU LEU A . n A 1 89 LYS 89 67 67 LYS LYS A . n A 1 90 PRO 90 68 68 PRO PRO A . n A 1 91 VAL 91 69 69 VAL VAL A . n A 1 92 VAL 92 70 70 VAL VAL A . n A 1 93 HIS 93 71 71 HIS HIS A . n A 1 94 PRO 94 72 72 PRO PRO A . n A 1 95 ALA 95 73 73 ALA ALA A . n A 1 96 THR 96 74 74 THR THR A . n A 1 97 VAL 97 75 75 VAL VAL A . n A 1 98 VAL 98 76 76 VAL VAL A . n A 1 99 VAL 99 77 77 VAL VAL A . n A 1 100 GLU 100 78 78 GLU GLU A . n A 1 101 LEU 101 79 79 LEU LEU A . n A 1 102 TYR 102 80 80 TYR TYR A . n A 1 103 ALA 103 81 81 ALA ALA A . n A 1 104 GLY 104 82 82 GLY GLY A . n A 1 105 ARG 105 83 83 ARG ARG A . n A 1 106 LEU 106 84 84 LEU LEU A . n A 1 107 GLY 107 85 85 GLY GLY A . n A 1 108 THR 108 86 86 THR THR A . n A 1 109 SER 109 87 87 SER SER A . n A 1 110 SER 110 88 88 SER SER A . n A 1 111 LEU 111 89 89 LEU LEU A . n A 1 112 VAL 112 90 90 VAL VAL A . n A 1 113 LEU 113 91 91 LEU LEU A . n A 1 114 GLU 114 92 92 GLU GLU A . n A 1 115 HIS 115 93 93 HIS HIS A . n A 1 116 ARG 116 94 94 ARG ARG A . n A 1 117 LEU 117 95 95 LEU LEU A . n A 1 118 HIS 118 96 96 HIS HIS A . n A 1 119 THR 119 97 97 THR THR A . n A 1 120 LEU 120 98 98 LEU LEU A . n A 1 121 GLU 121 99 99 GLU GLU A . n A 1 122 ASP 122 100 100 ASP ASP A . n A 1 123 PRO 123 101 101 PRO PRO A . n A 1 124 GLN 124 102 102 GLN GLN A . n A 1 125 GLY 125 103 103 GLY GLY A . n A 1 126 THR 126 104 104 THR THR A . n A 1 127 TYR 127 105 105 TYR TYR A . n A 1 128 GLY 128 106 106 GLY GLY A . n A 1 129 GLU 129 107 107 GLU GLU A . n A 1 130 GLY 130 108 108 GLY GLY A . n A 1 131 HIS 131 109 109 HIS HIS A . n A 1 132 CYS 132 110 110 CYS CYS A . n A 1 133 LYS 133 111 111 LYS LYS A . n A 1 134 LEU 134 112 112 LEU LEU A . n A 1 135 VAL 135 113 113 VAL VAL A . n A 1 136 TRP 136 114 114 TRP TRP A . n A 1 137 VAL 137 115 115 VAL VAL A . n A 1 138 ARG 138 116 116 ARG ARG A . n A 1 139 HIS 139 117 117 HIS HIS A . n A 1 140 ALA 140 118 118 ALA ALA A . n A 1 141 GLU 141 119 119 GLU GLU A . n A 1 142 ASN 142 120 120 ASN ASN A . n A 1 143 ARG 143 121 121 ARG ARG A . n A 1 144 SER 144 122 122 SER SER A . n A 1 145 THR 145 123 123 THR THR A . n A 1 146 PRO 146 124 124 PRO PRO A . n A 1 147 VAL 147 125 125 VAL VAL A . n A 1 148 PRO 148 126 126 PRO PRO A . n A 1 149 ASP 149 127 127 ASP ASP A . n A 1 150 SER 150 128 128 SER SER A . n A 1 151 ILE 151 129 129 ILE ILE A . n A 1 152 ARG 152 130 130 ARG ARG A . n A 1 153 ALA 153 131 131 ALA ALA A . n A 1 154 ALA 154 132 132 ALA ALA A . n A 1 155 ILE 155 133 133 ILE ILE A . n A 1 156 ALA 156 134 134 ALA ALA A . n A 1 157 GLY 157 135 ? ? ? A . n A 1 158 SER 158 136 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 41 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 19 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7840 ? 1 MORE -69 ? 1 'SSA (A^2)' 22290 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 215 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-03-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-10-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 7.8055 -0.8547 9.0495 0.0853 0.1117 0.0623 0.0087 -0.0070 0.0029 1.1749 1.2149 0.7579 0.5954 0.1733 0.6194 -0.0508 0.0255 0.0253 -0.1406 -0.0103 -0.0167 0.0033 0.0110 0.0234 'X-RAY DIFFRACTION' 2 ? refined 13.2985 10.2737 7.0842 0.1375 0.0575 0.0722 0.0174 -0.0361 -0.0433 1.6108 1.0664 1.7661 -0.3278 0.6332 -0.6679 -0.1264 0.0593 0.0671 -0.1554 0.1784 -0.1499 0.0044 -0.3041 -0.0453 'X-RAY DIFFRACTION' 3 ? refined 15.9677 0.7173 11.6824 0.0697 0.0967 0.0658 0.0181 -0.0161 -0.0200 2.6571 2.2368 0.8729 1.4376 -0.3418 0.0587 -0.0104 0.0480 -0.0376 -0.3274 -0.0210 -0.1769 0.0707 0.0429 0.0965 'X-RAY DIFFRACTION' 4 ? refined 16.9367 1.1659 11.2616 0.1024 0.0972 0.0702 -0.0046 -0.0199 -0.0188 1.2032 1.8231 1.5773 0.4000 -0.2258 -0.6655 0.0157 -0.0490 0.0333 -0.2987 -0.0319 -0.2069 0.1303 -0.1011 0.1166 'X-RAY DIFFRACTION' 5 ? refined 19.8033 21.2069 8.0897 0.2351 0.0359 0.1619 -0.0388 -0.0384 -0.0605 4.7059 3.8200 27.8129 0.3259 5.9752 -3.2353 -0.6436 0.1491 0.4945 -0.1578 0.7320 -0.2088 -0.4092 -0.9984 0.1454 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 5 A 42 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 43 A 66 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 67 A 90 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 91 A 116 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 117 A 134 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 MLPHARE . ? ? ? ? phasing ? ? ? 8 DM . ? ? ? ? phasing ? ? ? 9 SOLVE . ? ? ? ? phasing ? ? ? 10 RESOLVE . ? ? ? ? phasing ? ? ? 11 HKL-3000 . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 235 ? ? O A HOH 236 ? ? 2.06 2 1 O A HOH 185 ? ? O A HOH 192 ? ? 2.13 3 1 O A HOH 150 ? ? O A HOH 189 ? ? 2.16 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 50 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -83.65 _pdbx_validate_torsion.psi 34.06 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -21 ? A MSE 1 2 1 Y 1 A GLY -20 ? A GLY 2 3 1 Y 1 A SER -19 ? A SER 3 4 1 Y 1 A SER -18 ? A SER 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A HIS -14 ? A HIS 8 9 1 Y 1 A HIS -13 ? A HIS 9 10 1 Y 1 A HIS -12 ? A HIS 10 11 1 Y 1 A SER -11 ? A SER 11 12 1 Y 1 A SER -10 ? A SER 12 13 1 Y 1 A GLY -9 ? A GLY 13 14 1 Y 1 A ARG -8 ? A ARG 14 15 1 Y 1 A GLU -7 ? A GLU 15 16 1 Y 1 A ASN -6 ? A ASN 16 17 1 Y 1 A LEU -5 ? A LEU 17 18 1 Y 1 A TYR -4 ? A TYR 18 19 1 Y 1 A PHE -3 ? A PHE 19 20 1 Y 1 A GLN -2 ? A GLN 20 21 1 Y 1 A GLY -1 ? A GLY 21 22 1 Y 1 A HIS 0 ? A HIS 22 23 1 Y 1 A MSE 1 ? A MSE 23 24 1 Y 1 A ALA 2 ? A ALA 24 25 1 Y 1 A ASP 3 ? A ASP 25 26 1 Y 1 A ARG 4 ? A ARG 26 27 1 Y 1 A GLY 135 ? A GLY 157 28 1 Y 1 A SER 136 ? A SER 158 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 201 201 CL CL A . C 3 HOH 1 137 1 HOH HOH A . C 3 HOH 2 138 2 HOH HOH A . C 3 HOH 3 139 3 HOH HOH A . C 3 HOH 4 140 4 HOH HOH A . C 3 HOH 5 141 5 HOH HOH A . C 3 HOH 6 142 6 HOH HOH A . C 3 HOH 7 143 7 HOH HOH A . C 3 HOH 8 144 8 HOH HOH A . C 3 HOH 9 145 9 HOH HOH A . C 3 HOH 10 146 10 HOH HOH A . C 3 HOH 11 147 11 HOH HOH A . C 3 HOH 12 148 12 HOH HOH A . C 3 HOH 13 149 13 HOH HOH A . C 3 HOH 14 150 14 HOH HOH A . C 3 HOH 15 151 15 HOH HOH A . C 3 HOH 16 152 16 HOH HOH A . C 3 HOH 17 153 17 HOH HOH A . C 3 HOH 18 154 18 HOH HOH A . C 3 HOH 19 155 19 HOH HOH A . C 3 HOH 20 156 20 HOH HOH A . C 3 HOH 21 157 21 HOH HOH A . C 3 HOH 22 158 22 HOH HOH A . C 3 HOH 23 159 23 HOH HOH A . C 3 HOH 24 160 24 HOH HOH A . C 3 HOH 25 161 25 HOH HOH A . C 3 HOH 26 162 26 HOH HOH A . C 3 HOH 27 163 27 HOH HOH A . C 3 HOH 28 164 28 HOH HOH A . C 3 HOH 29 165 29 HOH HOH A . C 3 HOH 30 166 30 HOH HOH A . C 3 HOH 31 167 31 HOH HOH A . C 3 HOH 32 168 32 HOH HOH A . C 3 HOH 33 169 33 HOH HOH A . C 3 HOH 34 170 34 HOH HOH A . C 3 HOH 35 171 35 HOH HOH A . C 3 HOH 36 172 36 HOH HOH A . C 3 HOH 37 173 37 HOH HOH A . C 3 HOH 38 174 38 HOH HOH A . C 3 HOH 39 175 39 HOH HOH A . C 3 HOH 40 176 40 HOH HOH A . C 3 HOH 41 177 41 HOH HOH A . C 3 HOH 42 178 42 HOH HOH A . C 3 HOH 43 179 43 HOH HOH A . C 3 HOH 44 180 44 HOH HOH A . C 3 HOH 45 181 45 HOH HOH A . C 3 HOH 46 182 46 HOH HOH A . C 3 HOH 47 183 47 HOH HOH A . C 3 HOH 48 184 48 HOH HOH A . C 3 HOH 49 185 49 HOH HOH A . C 3 HOH 50 186 50 HOH HOH A . C 3 HOH 51 187 51 HOH HOH A . C 3 HOH 52 188 52 HOH HOH A . C 3 HOH 53 189 53 HOH HOH A . C 3 HOH 54 190 54 HOH HOH A . C 3 HOH 55 191 55 HOH HOH A . C 3 HOH 56 192 56 HOH HOH A . C 3 HOH 57 193 57 HOH HOH A . C 3 HOH 58 194 58 HOH HOH A . C 3 HOH 59 195 59 HOH HOH A . C 3 HOH 60 196 60 HOH HOH A . C 3 HOH 61 197 61 HOH HOH A . C 3 HOH 62 198 62 HOH HOH A . C 3 HOH 63 199 63 HOH HOH A . C 3 HOH 64 200 64 HOH HOH A . C 3 HOH 65 202 65 HOH HOH A . C 3 HOH 66 203 66 HOH HOH A . C 3 HOH 67 204 67 HOH HOH A . C 3 HOH 68 205 68 HOH HOH A . C 3 HOH 69 206 69 HOH HOH A . C 3 HOH 70 207 70 HOH HOH A . C 3 HOH 71 208 71 HOH HOH A . C 3 HOH 72 209 72 HOH HOH A . C 3 HOH 73 210 73 HOH HOH A . C 3 HOH 74 211 74 HOH HOH A . C 3 HOH 75 212 75 HOH HOH A . C 3 HOH 76 213 76 HOH HOH A . C 3 HOH 77 214 77 HOH HOH A . C 3 HOH 78 215 78 HOH HOH A . C 3 HOH 79 216 79 HOH HOH A . C 3 HOH 80 217 80 HOH HOH A . C 3 HOH 81 218 81 HOH HOH A . C 3 HOH 82 219 82 HOH HOH A . C 3 HOH 83 220 83 HOH HOH A . C 3 HOH 84 221 84 HOH HOH A . C 3 HOH 85 222 85 HOH HOH A . C 3 HOH 86 223 86 HOH HOH A . C 3 HOH 87 224 87 HOH HOH A . C 3 HOH 88 225 88 HOH HOH A . C 3 HOH 89 226 89 HOH HOH A . C 3 HOH 90 227 90 HOH HOH A . C 3 HOH 91 228 91 HOH HOH A . C 3 HOH 92 229 92 HOH HOH A . C 3 HOH 93 230 93 HOH HOH A . C 3 HOH 94 231 94 HOH HOH A . C 3 HOH 95 232 95 HOH HOH A . C 3 HOH 96 233 96 HOH HOH A . C 3 HOH 97 234 97 HOH HOH A . C 3 HOH 98 235 98 HOH HOH A . C 3 HOH 99 236 99 HOH HOH A . C 3 HOH 100 237 100 HOH HOH A . C 3 HOH 101 238 101 HOH HOH A . C 3 HOH 102 239 102 HOH HOH A . C 3 HOH 103 240 103 HOH HOH A . #