data_3QZ0 # _entry.id 3QZ0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3QZ0 RCSB RCSB064281 WWPDB D_1000064281 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3QZ0 _pdbx_database_status.recvd_initial_deposition_date 2011-03-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Miller, D.P.' 1 'McDowell, J.V.' 2 'Heroux, A.' 3 'Bell, J.K.' 4 'Marconi, R.T.' 5 'Conrad, D.H.' 6 'Burgner, J.W.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Structure of factor H-binding protein B (FhbB) of the periopathogen, Treponema denticola: insights into progression of periodontal disease. ; J.Biol.Chem. 287 12715 12722 2012 JBCHA3 US 0021-9258 0071 ? 22371503 10.1074/jbc.M112.339721 1 'Crystallization of the factor H-binding protein, FhbB, from the periopathogen Treponema denticola.' 'Acta Crystallogr.,Sect.F' 67 678 681 2011 ? DK 1744-3091 ? ? 21636910 10.1107/S1744309111011298 2 'Analysis of unique interaction between complement regulatory protein factor H and periodontal pathogen Treponema denticola' Infect.Immun. 77 1417 1425 2009 ? US 0019-9567 999 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Miller, D.P.' 1 primary 'Bell, J.K.' 2 primary 'McDowell, J.V.' 3 primary 'Conrad, D.H.' 4 primary 'Burgner, J.W.' 5 primary 'Heroux, A.' 6 primary 'Marconi, R.T.' 7 1 'Miller, D.P.' 8 1 'McDowell, J.V.' 9 1 'Bell, J.K.' 10 1 'Marconi, R.T.' 11 2 'McDowell, J.V.' 12 2 'Huang, B.' 13 2 'Fenno, J.C.' 14 2 'Marconi, R.T.' 15 # _cell.entry_id 3QZ0 _cell.length_a 46.921 _cell.length_b 46.921 _cell.length_c 168.801 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3QZ0 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Factor H binding protein' 10700.863 2 ? ? 'residues 24-102' ? 2 non-polymer syn 'THIOCYANATE ION' 58.082 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 152 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)AHHHHHHVDDDDKTFK(MSE)NTAQKAHYEKFINALENELKTRHIPAGAVID(MSE)LAEINTEALALDYQIVDK KPGTSIAQGTKAAALRKRFIPKKIK ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHVDDDDKTFKMNTAQKAHYEKFINALENELKTRHIPAGAVIDMLAEINTEALALDYQIVDKKPGTSIAQGTKA AALRKRFIPKKIK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 VAL n 1 10 ASP n 1 11 ASP n 1 12 ASP n 1 13 ASP n 1 14 LYS n 1 15 THR n 1 16 PHE n 1 17 LYS n 1 18 MSE n 1 19 ASN n 1 20 THR n 1 21 ALA n 1 22 GLN n 1 23 LYS n 1 24 ALA n 1 25 HIS n 1 26 TYR n 1 27 GLU n 1 28 LYS n 1 29 PHE n 1 30 ILE n 1 31 ASN n 1 32 ALA n 1 33 LEU n 1 34 GLU n 1 35 ASN n 1 36 GLU n 1 37 LEU n 1 38 LYS n 1 39 THR n 1 40 ARG n 1 41 HIS n 1 42 ILE n 1 43 PRO n 1 44 ALA n 1 45 GLY n 1 46 ALA n 1 47 VAL n 1 48 ILE n 1 49 ASP n 1 50 MSE n 1 51 LEU n 1 52 ALA n 1 53 GLU n 1 54 ILE n 1 55 ASN n 1 56 THR n 1 57 GLU n 1 58 ALA n 1 59 LEU n 1 60 ALA n 1 61 LEU n 1 62 ASP n 1 63 TYR n 1 64 GLN n 1 65 ILE n 1 66 VAL n 1 67 ASP n 1 68 LYS n 1 69 LYS n 1 70 PRO n 1 71 GLY n 1 72 THR n 1 73 SER n 1 74 ILE n 1 75 ALA n 1 76 GLN n 1 77 GLY n 1 78 THR n 1 79 LYS n 1 80 ALA n 1 81 ALA n 1 82 ALA n 1 83 LEU n 1 84 ARG n 1 85 LYS n 1 86 ARG n 1 87 PHE n 1 88 ILE n 1 89 PRO n 1 90 LYS n 1 91 LYS n 1 92 ILE n 1 93 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'fhbB, TDE_0108' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 35405 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Treponema denticola' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 158 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)(pLyS)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET46 Ek/LIC' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q73RI0_TREDE _struct_ref.pdbx_db_accession Q73RI0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code TFKMNTAQKAHYEKFINALENELKTRHIPAGAVIDMLAEINTEALALDYQIVDKKPGTSIAQGTKAAALRKRFIPKKIK _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3QZ0 A 15 ? 93 ? Q73RI0 24 ? 102 ? 24 102 2 1 3QZ0 B 15 ? 93 ? Q73RI0 24 ? 102 ? 24 102 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3QZ0 MSE A 1 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 10 1 1 3QZ0 ALA A 2 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 11 2 1 3QZ0 HIS A 3 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 12 3 1 3QZ0 HIS A 4 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 13 4 1 3QZ0 HIS A 5 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 14 5 1 3QZ0 HIS A 6 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 15 6 1 3QZ0 HIS A 7 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 16 7 1 3QZ0 HIS A 8 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 17 8 1 3QZ0 VAL A 9 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 18 9 1 3QZ0 ASP A 10 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 19 10 1 3QZ0 ASP A 11 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 20 11 1 3QZ0 ASP A 12 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 21 12 1 3QZ0 ASP A 13 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 22 13 1 3QZ0 LYS A 14 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 23 14 2 3QZ0 MSE B 1 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 10 15 2 3QZ0 ALA B 2 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 11 16 2 3QZ0 HIS B 3 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 12 17 2 3QZ0 HIS B 4 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 13 18 2 3QZ0 HIS B 5 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 14 19 2 3QZ0 HIS B 6 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 15 20 2 3QZ0 HIS B 7 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 16 21 2 3QZ0 HIS B 8 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 17 22 2 3QZ0 VAL B 9 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 18 23 2 3QZ0 ASP B 10 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 19 24 2 3QZ0 ASP B 11 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 20 25 2 3QZ0 ASP B 12 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 21 26 2 3QZ0 ASP B 13 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 22 27 2 3QZ0 LYS B 14 ? UNP Q73RI0 ? ? 'EXPRESSION TAG' 23 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SCN non-polymer . 'THIOCYANATE ION' ? 'C N S -1' 58.082 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3QZ0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_percent_sol 44.08 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;1.39 M sodium citrate, 0.1 M HEPES, 0.2 M sodium thiocyanate, 10 mM dithiothreitol, 10% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-05-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double silicon(111) crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.2822 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.2822 # _reflns.entry_id 3QZ0 _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.77 _reflns.number_obs 19167 _reflns.number_all 19293 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3QZ0 _refine.ls_number_reflns_obs 19030 _refine.ls_number_reflns_all 19293 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.24 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.207 _refine.ls_d_res_high 1.770 _refine.ls_percent_reflns_obs 98.35 _refine.ls_R_factor_obs 0.1906 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1889 _refine.ls_R_factor_R_free 0.2057 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.00 _refine.ls_number_reflns_R_free 1903 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -0.6285 _refine.aniso_B[2][2] -0.6285 _refine.aniso_B[3][3] 1.2570 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.387 _refine.solvent_model_param_bsol 41.980 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.18 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1231 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 152 _refine_hist.number_atoms_total 1395 _refine_hist.d_res_high 1.770 _refine_hist.d_res_low 45.207 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 1284 ? 'X-RAY DIFFRACTION' f_angle_d 1.038 ? ? 1725 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.066 ? ? 500 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.070 ? ? 200 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 216 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.7704 1.8337 1648 0.1933 97.00 0.2460 . . 183 . . . . 'X-RAY DIFFRACTION' . 1.8337 1.9071 1646 0.1866 97.00 0.2404 . . 183 . . . . 'X-RAY DIFFRACTION' . 1.9071 1.9939 1652 0.1909 98.00 0.2197 . . 183 . . . . 'X-RAY DIFFRACTION' . 1.9939 2.0991 1675 0.1784 99.00 0.1955 . . 187 . . . . 'X-RAY DIFFRACTION' . 2.0991 2.2306 1715 0.1765 99.00 0.1818 . . 191 . . . . 'X-RAY DIFFRACTION' . 2.2306 2.4028 1689 0.1807 99.00 0.2368 . . 187 . . . . 'X-RAY DIFFRACTION' . 2.4028 2.6446 1729 0.1945 99.00 0.2198 . . 192 . . . . 'X-RAY DIFFRACTION' . 2.6446 3.0272 1740 0.2036 99.00 0.1913 . . 193 . . . . 'X-RAY DIFFRACTION' . 3.0272 3.8136 1761 0.1889 99.00 0.1970 . . 196 . . . . 'X-RAY DIFFRACTION' . 3.8136 45.2217 1872 0.1813 97.00 0.1903 . . 208 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 3QZ0 _struct.title 'Structure of Treponema denticola Factor H Binding protein (FhbB), selenomethionine derivative' _struct.pdbx_descriptor 'Factor H binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3QZ0 _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'Factor H binding protein, Factor H, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 19 ? LYS A 38 ? ASN A 28 LYS A 47 1 ? 20 HELX_P HELX_P2 2 PRO A 43 ? ALA A 60 ? PRO A 52 ALA A 69 1 ? 18 HELX_P HELX_P3 3 LYS A 79 ? ARG A 86 ? LYS A 88 ARG A 95 1 ? 8 HELX_P HELX_P4 4 ASN B 19 ? ARG B 40 ? ASN B 28 ARG B 49 1 ? 22 HELX_P HELX_P5 5 PRO B 43 ? LEU B 61 ? PRO B 52 LEU B 70 1 ? 19 HELX_P HELX_P6 6 LYS B 79 ? ARG B 86 ? LYS B 88 ARG B 95 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LYS 17 C ? ? ? 1_555 A MSE 18 N ? ? A LYS 26 A MSE 27 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 18 C ? ? ? 1_555 A ASN 19 N ? ? A MSE 27 A ASN 28 1_555 ? ? ? ? ? ? ? 1.326 ? covale3 covale ? ? A ASP 49 C ? ? ? 1_555 A MSE 50 N ? ? A ASP 58 A MSE 59 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale ? ? A MSE 50 C ? ? ? 1_555 A LEU 51 N ? ? A MSE 59 A LEU 60 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? B LYS 17 C ? ? ? 1_555 B MSE 18 N ? ? B LYS 26 B MSE 27 1_555 ? ? ? ? ? ? ? 1.331 ? covale6 covale ? ? B MSE 18 C ? ? ? 1_555 B ASN 19 N ? ? B MSE 27 B ASN 28 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale ? ? B ASP 49 C ? ? ? 1_555 B MSE 50 N ? ? B ASP 58 B MSE 59 1_555 ? ? ? ? ? ? ? 1.325 ? covale8 covale ? ? B MSE 50 C ? ? ? 1_555 B LEU 51 N ? ? B MSE 59 B LEU 60 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 63 ? ASP A 67 ? TYR A 72 ASP A 76 A 2 PHE A 87 ? LYS A 91 ? PHE A 96 LYS A 100 B 1 TYR B 63 ? ASP B 67 ? TYR B 72 ASP B 76 B 2 PHE B 87 ? LYS B 91 ? PHE B 96 LYS B 100 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 66 ? N VAL A 75 O ILE A 88 ? O ILE A 97 B 1 2 N VAL B 66 ? N VAL B 75 O ILE B 88 ? O ILE B 97 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SCN B 1' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SCN B 103' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE GOL B 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PRO B 43 ? PRO B 52 . ? 1_555 ? 2 AC1 7 ALA B 44 ? ALA B 53 . ? 1_555 ? 3 AC1 7 GLY B 45 ? GLY B 54 . ? 1_555 ? 4 AC1 7 GLY B 45 ? GLY B 54 . ? 8_665 ? 5 AC1 7 SCN D . ? SCN B 103 . ? 8_665 ? 6 AC1 7 SCN D . ? SCN B 103 . ? 1_555 ? 7 AC1 7 HOH G . ? HOH B 109 . ? 8_665 ? 8 AC2 6 SCN C . ? SCN B 1 . ? 1_555 ? 9 AC2 6 SCN C . ? SCN B 1 . ? 8_665 ? 10 AC2 6 PRO B 43 ? PRO B 52 . ? 1_555 ? 11 AC2 6 GLY B 45 ? GLY B 54 . ? 8_665 ? 12 AC2 6 ALA B 46 ? ALA B 55 . ? 8_665 ? 13 AC2 6 ALA B 46 ? ALA B 55 . ? 1_555 ? 14 AC3 2 PHE B 29 ? PHE B 38 . ? 1_555 ? 15 AC3 2 GLU B 36 ? GLU B 45 . ? 1_555 ? # _database_PDB_matrix.entry_id 3QZ0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3QZ0 _atom_sites.fract_transf_matrix[1][1] 0.021312 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021312 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005924 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 10 ? ? ? A . n A 1 2 ALA 2 11 ? ? ? A . n A 1 3 HIS 3 12 ? ? ? A . n A 1 4 HIS 4 13 ? ? ? A . n A 1 5 HIS 5 14 ? ? ? A . n A 1 6 HIS 6 15 ? ? ? A . n A 1 7 HIS 7 16 ? ? ? A . n A 1 8 HIS 8 17 ? ? ? A . n A 1 9 VAL 9 18 ? ? ? A . n A 1 10 ASP 10 19 ? ? ? A . n A 1 11 ASP 11 20 ? ? ? A . n A 1 12 ASP 12 21 ? ? ? A . n A 1 13 ASP 13 22 ? ? ? A . n A 1 14 LYS 14 23 ? ? ? A . n A 1 15 THR 15 24 24 THR THR A . n A 1 16 PHE 16 25 25 PHE PHE A . n A 1 17 LYS 17 26 26 LYS LYS A . n A 1 18 MSE 18 27 27 MSE MSE A . n A 1 19 ASN 19 28 28 ASN ASN A . n A 1 20 THR 20 29 29 THR THR A . n A 1 21 ALA 21 30 30 ALA ALA A . n A 1 22 GLN 22 31 31 GLN GLN A . n A 1 23 LYS 23 32 32 LYS LYS A . n A 1 24 ALA 24 33 33 ALA ALA A . n A 1 25 HIS 25 34 34 HIS HIS A . n A 1 26 TYR 26 35 35 TYR TYR A . n A 1 27 GLU 27 36 36 GLU GLU A . n A 1 28 LYS 28 37 37 LYS LYS A . n A 1 29 PHE 29 38 38 PHE PHE A . n A 1 30 ILE 30 39 39 ILE ILE A . n A 1 31 ASN 31 40 40 ASN ASN A . n A 1 32 ALA 32 41 41 ALA ALA A . n A 1 33 LEU 33 42 42 LEU LEU A . n A 1 34 GLU 34 43 43 GLU GLU A . n A 1 35 ASN 35 44 44 ASN ASN A . n A 1 36 GLU 36 45 45 GLU GLU A . n A 1 37 LEU 37 46 46 LEU LEU A . n A 1 38 LYS 38 47 47 LYS LYS A . n A 1 39 THR 39 48 48 THR THR A . n A 1 40 ARG 40 49 49 ARG ARG A . n A 1 41 HIS 41 50 50 HIS HIS A . n A 1 42 ILE 42 51 51 ILE ILE A . n A 1 43 PRO 43 52 52 PRO PRO A . n A 1 44 ALA 44 53 53 ALA ALA A . n A 1 45 GLY 45 54 54 GLY GLY A . n A 1 46 ALA 46 55 55 ALA ALA A . n A 1 47 VAL 47 56 56 VAL VAL A . n A 1 48 ILE 48 57 57 ILE ILE A . n A 1 49 ASP 49 58 58 ASP ASP A . n A 1 50 MSE 50 59 59 MSE MSE A . n A 1 51 LEU 51 60 60 LEU LEU A . n A 1 52 ALA 52 61 61 ALA ALA A . n A 1 53 GLU 53 62 62 GLU GLU A . n A 1 54 ILE 54 63 63 ILE ILE A . n A 1 55 ASN 55 64 64 ASN ASN A . n A 1 56 THR 56 65 65 THR THR A . n A 1 57 GLU 57 66 66 GLU GLU A . n A 1 58 ALA 58 67 67 ALA ALA A . n A 1 59 LEU 59 68 68 LEU LEU A . n A 1 60 ALA 60 69 69 ALA ALA A . n A 1 61 LEU 61 70 70 LEU LEU A . n A 1 62 ASP 62 71 71 ASP ASP A . n A 1 63 TYR 63 72 72 TYR TYR A . n A 1 64 GLN 64 73 73 GLN GLN A . n A 1 65 ILE 65 74 74 ILE ILE A . n A 1 66 VAL 66 75 75 VAL VAL A . n A 1 67 ASP 67 76 76 ASP ASP A . n A 1 68 LYS 68 77 77 LYS LYS A . n A 1 69 LYS 69 78 78 LYS LYS A . n A 1 70 PRO 70 79 79 PRO PRO A . n A 1 71 GLY 71 80 80 GLY GLY A . n A 1 72 THR 72 81 81 THR THR A . n A 1 73 SER 73 82 82 SER SER A . n A 1 74 ILE 74 83 83 ILE ILE A . n A 1 75 ALA 75 84 84 ALA ALA A . n A 1 76 GLN 76 85 85 GLN GLN A . n A 1 77 GLY 77 86 86 GLY GLY A . n A 1 78 THR 78 87 87 THR THR A . n A 1 79 LYS 79 88 88 LYS LYS A . n A 1 80 ALA 80 89 89 ALA ALA A . n A 1 81 ALA 81 90 90 ALA ALA A . n A 1 82 ALA 82 91 91 ALA ALA A . n A 1 83 LEU 83 92 92 LEU LEU A . n A 1 84 ARG 84 93 93 ARG ARG A . n A 1 85 LYS 85 94 94 LYS LYS A . n A 1 86 ARG 86 95 95 ARG ARG A . n A 1 87 PHE 87 96 96 PHE PHE A . n A 1 88 ILE 88 97 97 ILE ILE A . n A 1 89 PRO 89 98 98 PRO PRO A . n A 1 90 LYS 90 99 99 LYS LYS A . n A 1 91 LYS 91 100 100 LYS LYS A . n A 1 92 ILE 92 101 101 ILE ILE A . n A 1 93 LYS 93 102 ? ? ? A . n B 1 1 MSE 1 10 ? ? ? B . n B 1 2 ALA 2 11 ? ? ? B . n B 1 3 HIS 3 12 ? ? ? B . n B 1 4 HIS 4 13 ? ? ? B . n B 1 5 HIS 5 14 ? ? ? B . n B 1 6 HIS 6 15 ? ? ? B . n B 1 7 HIS 7 16 ? ? ? B . n B 1 8 HIS 8 17 ? ? ? B . n B 1 9 VAL 9 18 ? ? ? B . n B 1 10 ASP 10 19 ? ? ? B . n B 1 11 ASP 11 20 ? ? ? B . n B 1 12 ASP 12 21 ? ? ? B . n B 1 13 ASP 13 22 ? ? ? B . n B 1 14 LYS 14 23 23 LYS LYS B . n B 1 15 THR 15 24 24 THR THR B . n B 1 16 PHE 16 25 25 PHE PHE B . n B 1 17 LYS 17 26 26 LYS LYS B . n B 1 18 MSE 18 27 27 MSE MSE B . n B 1 19 ASN 19 28 28 ASN ASN B . n B 1 20 THR 20 29 29 THR THR B . n B 1 21 ALA 21 30 30 ALA ALA B . n B 1 22 GLN 22 31 31 GLN GLN B . n B 1 23 LYS 23 32 32 LYS LYS B . n B 1 24 ALA 24 33 33 ALA ALA B . n B 1 25 HIS 25 34 34 HIS HIS B . n B 1 26 TYR 26 35 35 TYR TYR B . n B 1 27 GLU 27 36 36 GLU GLU B . n B 1 28 LYS 28 37 37 LYS LYS B . n B 1 29 PHE 29 38 38 PHE PHE B . n B 1 30 ILE 30 39 39 ILE ILE B . n B 1 31 ASN 31 40 40 ASN ASN B . n B 1 32 ALA 32 41 41 ALA ALA B . n B 1 33 LEU 33 42 42 LEU LEU B . n B 1 34 GLU 34 43 43 GLU GLU B . n B 1 35 ASN 35 44 44 ASN ASN B . n B 1 36 GLU 36 45 45 GLU GLU B . n B 1 37 LEU 37 46 46 LEU LEU B . n B 1 38 LYS 38 47 47 LYS LYS B . n B 1 39 THR 39 48 48 THR THR B . n B 1 40 ARG 40 49 49 ARG ARG B . n B 1 41 HIS 41 50 50 HIS HIS B . n B 1 42 ILE 42 51 51 ILE ILE B . n B 1 43 PRO 43 52 52 PRO PRO B . n B 1 44 ALA 44 53 53 ALA ALA B . n B 1 45 GLY 45 54 54 GLY GLY B . n B 1 46 ALA 46 55 55 ALA ALA B . n B 1 47 VAL 47 56 56 VAL VAL B . n B 1 48 ILE 48 57 57 ILE ILE B . n B 1 49 ASP 49 58 58 ASP ASP B . n B 1 50 MSE 50 59 59 MSE MSE B . n B 1 51 LEU 51 60 60 LEU LEU B . n B 1 52 ALA 52 61 61 ALA ALA B . n B 1 53 GLU 53 62 62 GLU GLU B . n B 1 54 ILE 54 63 63 ILE ILE B . n B 1 55 ASN 55 64 64 ASN ASN B . n B 1 56 THR 56 65 65 THR THR B . n B 1 57 GLU 57 66 66 GLU GLU B . n B 1 58 ALA 58 67 67 ALA ALA B . n B 1 59 LEU 59 68 68 LEU LEU B . n B 1 60 ALA 60 69 69 ALA ALA B . n B 1 61 LEU 61 70 70 LEU LEU B . n B 1 62 ASP 62 71 71 ASP ASP B . n B 1 63 TYR 63 72 72 TYR TYR B . n B 1 64 GLN 64 73 73 GLN GLN B . n B 1 65 ILE 65 74 74 ILE ILE B . n B 1 66 VAL 66 75 75 VAL VAL B . n B 1 67 ASP 67 76 76 ASP ASP B . n B 1 68 LYS 68 77 77 LYS LYS B . n B 1 69 LYS 69 78 78 LYS LYS B . n B 1 70 PRO 70 79 79 PRO PRO B . n B 1 71 GLY 71 80 80 GLY GLY B . n B 1 72 THR 72 81 81 THR THR B . n B 1 73 SER 73 82 82 SER SER B . n B 1 74 ILE 74 83 83 ILE ILE B . n B 1 75 ALA 75 84 84 ALA ALA B . n B 1 76 GLN 76 85 85 GLN GLN B . n B 1 77 GLY 77 86 86 GLY GLY B . n B 1 78 THR 78 87 87 THR THR B . n B 1 79 LYS 79 88 88 LYS LYS B . n B 1 80 ALA 80 89 89 ALA ALA B . n B 1 81 ALA 81 90 90 ALA ALA B . n B 1 82 ALA 82 91 91 ALA ALA B . n B 1 83 LEU 83 92 92 LEU LEU B . n B 1 84 ARG 84 93 93 ARG ARG B . n B 1 85 LYS 85 94 94 LYS LYS B . n B 1 86 ARG 86 95 95 ARG ARG B . n B 1 87 PHE 87 96 96 PHE PHE B . n B 1 88 ILE 88 97 97 ILE ILE B . n B 1 89 PRO 89 98 98 PRO PRO B . n B 1 90 LYS 90 99 99 LYS LYS B . n B 1 91 LYS 91 100 100 LYS LYS B . n B 1 92 ILE 92 101 101 ILE ILE B . n B 1 93 LYS 93 102 ? ? ? B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 18 A MSE 27 ? MET SELENOMETHIONINE 2 A MSE 50 A MSE 59 ? MET SELENOMETHIONINE 3 B MSE 18 B MSE 27 ? MET SELENOMETHIONINE 4 B MSE 50 B MSE 59 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,F 2 1 B,C,D,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B SCN 1 ? C SCN . 2 1 B SCN 103 ? D SCN . 3 1 B SCN 103 ? D SCN . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-07 2 'Structure model' 1 1 2012-03-21 3 'Structure model' 1 2 2012-04-25 4 'Structure model' 1 3 2012-06-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 SOLVE phasing 'within PHENIX' ? 2 PHENIX refinement '(phenix.refine: 1.6.1_357)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 B GLU 62 ? OE1 ? B GLU 53 OE1 2 1 Y 0 B GLU 62 ? OE2 ? B GLU 53 OE2 3 1 Y 0 B LYS 78 ? CE ? B LYS 69 CE 4 1 Y 0 B LYS 78 ? NZ ? B LYS 69 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 10 ? A MSE 1 2 1 Y 1 A ALA 11 ? A ALA 2 3 1 Y 1 A HIS 12 ? A HIS 3 4 1 Y 1 A HIS 13 ? A HIS 4 5 1 Y 1 A HIS 14 ? A HIS 5 6 1 Y 1 A HIS 15 ? A HIS 6 7 1 Y 1 A HIS 16 ? A HIS 7 8 1 Y 1 A HIS 17 ? A HIS 8 9 1 Y 1 A VAL 18 ? A VAL 9 10 1 Y 1 A ASP 19 ? A ASP 10 11 1 Y 1 A ASP 20 ? A ASP 11 12 1 Y 1 A ASP 21 ? A ASP 12 13 1 Y 1 A ASP 22 ? A ASP 13 14 1 Y 1 A LYS 23 ? A LYS 14 15 1 Y 1 A LYS 102 ? A LYS 93 16 1 Y 1 B MSE 10 ? B MSE 1 17 1 Y 1 B ALA 11 ? B ALA 2 18 1 Y 1 B HIS 12 ? B HIS 3 19 1 Y 1 B HIS 13 ? B HIS 4 20 1 Y 1 B HIS 14 ? B HIS 5 21 1 Y 1 B HIS 15 ? B HIS 6 22 1 Y 1 B HIS 16 ? B HIS 7 23 1 Y 1 B HIS 17 ? B HIS 8 24 1 Y 1 B VAL 18 ? B VAL 9 25 1 Y 1 B ASP 19 ? B ASP 10 26 1 Y 1 B ASP 20 ? B ASP 11 27 1 Y 1 B ASP 21 ? B ASP 12 28 1 Y 1 B ASP 22 ? B ASP 13 29 1 Y 1 B LYS 102 ? B LYS 93 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'THIOCYANATE ION' SCN 3 GLYCEROL GOL 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SCN 1 1 1 SCN SCN B . D 2 SCN 1 103 1 SCN SCN B . E 3 GOL 1 104 1 GOL GOL B . F 4 HOH 1 1 1 HOH HOH A . F 4 HOH 2 2 2 HOH HOH A . F 4 HOH 3 6 6 HOH HOH A . F 4 HOH 4 7 7 HOH HOH A . F 4 HOH 5 8 8 HOH HOH A . F 4 HOH 6 9 9 HOH HOH A . F 4 HOH 7 103 11 HOH HOH A . F 4 HOH 8 104 12 HOH HOH A . F 4 HOH 9 105 105 HOH HOH A . F 4 HOH 10 106 18 HOH HOH A . F 4 HOH 11 107 107 HOH HOH A . F 4 HOH 12 108 20 HOH HOH A . F 4 HOH 13 109 109 HOH HOH A . F 4 HOH 14 110 21 HOH HOH A . F 4 HOH 15 111 22 HOH HOH A . F 4 HOH 16 112 112 HOH HOH A . F 4 HOH 17 113 24 HOH HOH A . F 4 HOH 18 114 27 HOH HOH A . F 4 HOH 19 115 29 HOH HOH A . F 4 HOH 20 116 116 HOH HOH A . F 4 HOH 21 117 117 HOH HOH A . F 4 HOH 22 118 118 HOH HOH A . F 4 HOH 23 119 31 HOH HOH A . F 4 HOH 24 120 120 HOH HOH A . F 4 HOH 25 121 121 HOH HOH A . F 4 HOH 26 122 122 HOH HOH A . F 4 HOH 27 123 32 HOH HOH A . F 4 HOH 28 124 124 HOH HOH A . F 4 HOH 29 125 33 HOH HOH A . F 4 HOH 30 126 36 HOH HOH A . F 4 HOH 31 127 37 HOH HOH A . F 4 HOH 32 128 38 HOH HOH A . F 4 HOH 33 129 129 HOH HOH A . F 4 HOH 34 130 130 HOH HOH A . F 4 HOH 35 131 40 HOH HOH A . F 4 HOH 36 132 41 HOH HOH A . F 4 HOH 37 133 133 HOH HOH A . F 4 HOH 38 134 134 HOH HOH A . F 4 HOH 39 135 43 HOH HOH A . F 4 HOH 40 136 44 HOH HOH A . F 4 HOH 41 137 46 HOH HOH A . F 4 HOH 42 138 47 HOH HOH A . F 4 HOH 43 139 48 HOH HOH A . F 4 HOH 44 140 50 HOH HOH A . F 4 HOH 45 141 54 HOH HOH A . F 4 HOH 46 142 55 HOH HOH A . F 4 HOH 47 143 56 HOH HOH A . F 4 HOH 48 144 144 HOH HOH A . F 4 HOH 49 145 60 HOH HOH A . F 4 HOH 50 146 61 HOH HOH A . F 4 HOH 51 147 147 HOH HOH A . F 4 HOH 52 148 62 HOH HOH A . F 4 HOH 53 149 63 HOH HOH A . F 4 HOH 54 150 68 HOH HOH A . F 4 HOH 55 151 71 HOH HOH A . F 4 HOH 56 152 72 HOH HOH A . F 4 HOH 57 153 74 HOH HOH A . F 4 HOH 58 154 76 HOH HOH A . F 4 HOH 59 155 155 HOH HOH A . F 4 HOH 60 156 156 HOH HOH A . F 4 HOH 61 157 157 HOH HOH A . F 4 HOH 62 158 79 HOH HOH A . F 4 HOH 63 159 80 HOH HOH A . F 4 HOH 64 160 160 HOH HOH A . F 4 HOH 65 161 161 HOH HOH A . F 4 HOH 66 162 82 HOH HOH A . F 4 HOH 67 163 83 HOH HOH A . F 4 HOH 68 164 84 HOH HOH A . F 4 HOH 69 165 165 HOH HOH A . F 4 HOH 70 166 87 HOH HOH A . F 4 HOH 71 167 90 HOH HOH A . F 4 HOH 72 168 92 HOH HOH A . F 4 HOH 73 169 94 HOH HOH A . F 4 HOH 74 170 95 HOH HOH A . F 4 HOH 75 171 97 HOH HOH A . F 4 HOH 76 172 102 HOH HOH A . G 4 HOH 1 3 3 HOH HOH B . G 4 HOH 2 4 4 HOH HOH B . G 4 HOH 3 5 5 HOH HOH B . G 4 HOH 4 105 10 HOH HOH B . G 4 HOH 5 106 106 HOH HOH B . G 4 HOH 6 107 13 HOH HOH B . G 4 HOH 7 108 108 HOH HOH B . G 4 HOH 8 109 14 HOH HOH B . G 4 HOH 9 110 110 HOH HOH B . G 4 HOH 10 111 111 HOH HOH B . G 4 HOH 11 112 15 HOH HOH B . G 4 HOH 12 113 113 HOH HOH B . G 4 HOH 13 114 114 HOH HOH B . G 4 HOH 14 115 115 HOH HOH B . G 4 HOH 15 116 16 HOH HOH B . G 4 HOH 16 117 17 HOH HOH B . G 4 HOH 17 118 19 HOH HOH B . G 4 HOH 18 119 119 HOH HOH B . G 4 HOH 19 120 23 HOH HOH B . G 4 HOH 20 121 25 HOH HOH B . G 4 HOH 21 122 26 HOH HOH B . G 4 HOH 22 123 123 HOH HOH B . G 4 HOH 23 124 28 HOH HOH B . G 4 HOH 24 125 125 HOH HOH B . G 4 HOH 25 126 126 HOH HOH B . G 4 HOH 26 127 127 HOH HOH B . G 4 HOH 27 128 128 HOH HOH B . G 4 HOH 28 129 30 HOH HOH B . G 4 HOH 29 130 34 HOH HOH B . G 4 HOH 30 131 131 HOH HOH B . G 4 HOH 31 132 35 HOH HOH B . G 4 HOH 32 133 39 HOH HOH B . G 4 HOH 33 134 42 HOH HOH B . G 4 HOH 34 135 135 HOH HOH B . G 4 HOH 35 136 136 HOH HOH B . G 4 HOH 36 137 137 HOH HOH B . G 4 HOH 37 138 138 HOH HOH B . G 4 HOH 38 139 45 HOH HOH B . G 4 HOH 39 140 49 HOH HOH B . G 4 HOH 40 141 141 HOH HOH B . G 4 HOH 41 142 142 HOH HOH B . G 4 HOH 42 143 143 HOH HOH B . G 4 HOH 43 144 51 HOH HOH B . G 4 HOH 44 145 52 HOH HOH B . G 4 HOH 45 146 53 HOH HOH B . G 4 HOH 46 147 57 HOH HOH B . G 4 HOH 47 148 58 HOH HOH B . G 4 HOH 48 149 59 HOH HOH B . G 4 HOH 49 150 150 HOH HOH B . G 4 HOH 50 151 64 HOH HOH B . G 4 HOH 51 152 65 HOH HOH B . G 4 HOH 52 153 66 HOH HOH B . G 4 HOH 53 154 67 HOH HOH B . G 4 HOH 54 155 69 HOH HOH B . G 4 HOH 55 156 70 HOH HOH B . G 4 HOH 56 157 73 HOH HOH B . G 4 HOH 57 158 75 HOH HOH B . G 4 HOH 58 159 77 HOH HOH B . G 4 HOH 59 160 78 HOH HOH B . G 4 HOH 60 161 81 HOH HOH B . G 4 HOH 61 162 162 HOH HOH B . G 4 HOH 62 163 163 HOH HOH B . G 4 HOH 63 164 164 HOH HOH B . G 4 HOH 64 165 85 HOH HOH B . G 4 HOH 65 166 86 HOH HOH B . G 4 HOH 66 167 88 HOH HOH B . G 4 HOH 67 168 89 HOH HOH B . G 4 HOH 68 169 91 HOH HOH B . G 4 HOH 69 170 93 HOH HOH B . G 4 HOH 70 171 96 HOH HOH B . G 4 HOH 71 172 98 HOH HOH B . G 4 HOH 72 173 99 HOH HOH B . G 4 HOH 73 174 100 HOH HOH B . G 4 HOH 74 175 101 HOH HOH B . G 4 HOH 75 176 103 HOH HOH B . G 4 HOH 76 177 104 HOH HOH B . #