data_3RI8 # _entry.id 3RI8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RI8 pdb_00003ri8 10.2210/pdb3ri8/pdb RCSB RCSB064962 ? ? WWPDB D_1000064962 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BK1 'Wild type of the same protein.' unspecified PDB 3RI9 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RI8 _pdbx_database_status.recvd_initial_deposition_date 2011-04-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fushinobu, S.' 1 'Uno, T.' 2 'Kitaoka, M.' 3 'Hayashi, K.' 4 'Matsuzawa, H.' 5 'Wakagi, T.' 6 # _citation.id primary _citation.title 'Mutational analysis of fungal family 11 xylanases on pH optimum determination' _citation.journal_abbrev J.APPL.GLYOSCI. _citation.journal_volume 58 _citation.page_first 107 _citation.page_last 114 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country JA _citation.journal_id_ISSN 1344-7882 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI 10.5458/jag.jag.JAG-2011_001 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fushinobu, S.' 1 ? primary 'Uno, T.' 2 ? primary 'Kitaoka, M.' 3 ? primary 'Hayashi, K.' 4 ? primary 'Matsuzawa, H.' 5 ? primary 'Wakagi, T.' 6 ? # _cell.entry_id 3RI8 _cell.length_a 62.064 _cell.length_b 62.064 _cell.length_c 113.382 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RI8 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Endo-1,4-beta-xylanase 3' 20024.199 1 3.2.1.8 D37N ? ? 2 water nat water 18.015 77 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Xylanase 3, 1,4-beta-D-xylan xylanohydrolase 3, Xylanase C' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSAGINYVQNYNGNLGDFTYDESAGTFSMYWEDGVSSNFVVGLGWTTGSSNAITYSAEYSASGSSSYLAVYGWVNYPQAE YYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSITGTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHGFGN SDFNYQVMAVEAWSGAGSASVTISS ; _entity_poly.pdbx_seq_one_letter_code_can ;MSAGINYVQNYNGNLGDFTYDESAGTFSMYWEDGVSSNFVVGLGWTTGSSNAITYSAEYSASGSSSYLAVYGWVNYPQAE YYIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSITGTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHGFGN SDFNYQVMAVEAWSGAGSASVTISS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 ALA n 1 4 GLY n 1 5 ILE n 1 6 ASN n 1 7 TYR n 1 8 VAL n 1 9 GLN n 1 10 ASN n 1 11 TYR n 1 12 ASN n 1 13 GLY n 1 14 ASN n 1 15 LEU n 1 16 GLY n 1 17 ASP n 1 18 PHE n 1 19 THR n 1 20 TYR n 1 21 ASP n 1 22 GLU n 1 23 SER n 1 24 ALA n 1 25 GLY n 1 26 THR n 1 27 PHE n 1 28 SER n 1 29 MET n 1 30 TYR n 1 31 TRP n 1 32 GLU n 1 33 ASP n 1 34 GLY n 1 35 VAL n 1 36 SER n 1 37 SER n 1 38 ASN n 1 39 PHE n 1 40 VAL n 1 41 VAL n 1 42 GLY n 1 43 LEU n 1 44 GLY n 1 45 TRP n 1 46 THR n 1 47 THR n 1 48 GLY n 1 49 SER n 1 50 SER n 1 51 ASN n 1 52 ALA n 1 53 ILE n 1 54 THR n 1 55 TYR n 1 56 SER n 1 57 ALA n 1 58 GLU n 1 59 TYR n 1 60 SER n 1 61 ALA n 1 62 SER n 1 63 GLY n 1 64 SER n 1 65 SER n 1 66 SER n 1 67 TYR n 1 68 LEU n 1 69 ALA n 1 70 VAL n 1 71 TYR n 1 72 GLY n 1 73 TRP n 1 74 VAL n 1 75 ASN n 1 76 TYR n 1 77 PRO n 1 78 GLN n 1 79 ALA n 1 80 GLU n 1 81 TYR n 1 82 TYR n 1 83 ILE n 1 84 VAL n 1 85 GLU n 1 86 ASP n 1 87 TYR n 1 88 GLY n 1 89 ASP n 1 90 TYR n 1 91 ASN n 1 92 PRO n 1 93 CYS n 1 94 SER n 1 95 SER n 1 96 ALA n 1 97 THR n 1 98 SER n 1 99 LEU n 1 100 GLY n 1 101 THR n 1 102 VAL n 1 103 TYR n 1 104 SER n 1 105 ASP n 1 106 GLY n 1 107 SER n 1 108 THR n 1 109 TYR n 1 110 GLN n 1 111 VAL n 1 112 CYS n 1 113 THR n 1 114 ASP n 1 115 THR n 1 116 ARG n 1 117 THR n 1 118 ASN n 1 119 GLU n 1 120 PRO n 1 121 SER n 1 122 ILE n 1 123 THR n 1 124 GLY n 1 125 THR n 1 126 SER n 1 127 THR n 1 128 PHE n 1 129 THR n 1 130 GLN n 1 131 TYR n 1 132 PHE n 1 133 SER n 1 134 VAL n 1 135 ARG n 1 136 GLU n 1 137 SER n 1 138 THR n 1 139 ARG n 1 140 THR n 1 141 SER n 1 142 GLY n 1 143 THR n 1 144 VAL n 1 145 THR n 1 146 VAL n 1 147 ALA n 1 148 ASN n 1 149 HIS n 1 150 PHE n 1 151 ASN n 1 152 PHE n 1 153 TRP n 1 154 ALA n 1 155 GLN n 1 156 HIS n 1 157 GLY n 1 158 PHE n 1 159 GLY n 1 160 ASN n 1 161 SER n 1 162 ASP n 1 163 PHE n 1 164 ASN n 1 165 TYR n 1 166 GLN n 1 167 VAL n 1 168 MET n 1 169 ALA n 1 170 VAL n 1 171 GLU n 1 172 ALA n 1 173 TRP n 1 174 SER n 1 175 GLY n 1 176 ALA n 1 177 GLY n 1 178 SER n 1 179 ALA n 1 180 SER n 1 181 VAL n 1 182 THR n 1 183 ILE n 1 184 SER n 1 185 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene xynC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'IFO 4308' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'Co-expression with pT-groE' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aspergillus kawachii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 40384 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET17b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code XYN3_ASPKA _struct_ref.pdbx_db_accession P33557 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SAGINYVQNYNGNLADFTYDESAGTFSMYWEDGVSSDFVVGLGWTTGSSNAISYSAEYSASGSSSYLAVYGWVNYPQAEY YIVEDYGDYNPCSSATSLGTVYSDGSTYQVCTDTRTNEPSITGTSTFTQYFSVRESTRTSGTVTVANHFNFWAQHGFGNS DFNYQVMAVEAWSGAGSASVTISS ; _struct_ref.pdbx_align_begin 28 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RI8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 185 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P33557 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 211 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 184 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RI8 MET A 1 ? UNP P33557 ? ? 'expression tag' 0 1 1 3RI8 GLY A 16 ? UNP P33557 ALA 42 'SEE REMARK 999' 15 2 1 3RI8 ASN A 38 ? UNP P33557 ASP 64 'engineered mutation' 37 3 1 3RI8 THR A 54 ? UNP P33557 SER 80 'SEE REMARK 999' 53 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RI8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_percent_sol 54.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '1.5M sodium sulfate, 0.1M HEPES-NaOH, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type WEISSENBERG _diffrn_detector.pdbx_collection_date 1998-12-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-18B' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-18B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3RI8 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 80 _reflns.d_resolution_high 2.0 _reflns.number_obs 14918 _reflns.number_all 15679 _reflns.percent_possible_obs 95.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.041 _reflns.pdbx_netI_over_sigmaI 32.6 _reflns.B_iso_Wilson_estimate 28.0 _reflns.pdbx_redundancy 5.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 86.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.359 _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1304 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RI8 _refine.ls_number_reflns_obs 14086 _refine.ls_number_reflns_all 14918 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.70 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 94.99 _refine.ls_R_factor_obs 0.17084 _refine.ls_R_factor_all 0.17084 _refine.ls_R_factor_R_work 0.16796 _refine.ls_R_factor_R_free 0.22800 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 747 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.972 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.B_iso_mean 35.067 _refine.aniso_B[1][1] 0.09 _refine.aniso_B[2][2] 0.09 _refine.aniso_B[3][3] -0.18 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1BK1' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.153 _refine.overall_SU_ML 0.111 _refine.overall_SU_B 4.183 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3RI8 _refine_analyze.Luzzati_coordinate_error_obs 0.147 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.153 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1394 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 1471 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 34.70 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.022 0.021 ? 1435 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.122 1.888 ? 1965 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 8.058 5.000 ? 181 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.497 24.507 ? 71 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 14.143 15.000 ? 179 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19.830 15.000 ? 3 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.146 0.200 ? 207 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.010 0.020 ? 1152 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.401 1.500 ? 893 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2.494 2.000 ? 1431 ? 'X-RAY DIFFRACTION' r_scbond_it 3.348 3.000 ? 542 ? 'X-RAY DIFFRACTION' r_scangle_it 4.961 4.500 ? 534 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_R_work 908 _refine_ls_shell.R_factor_R_work 0.331 _refine_ls_shell.percent_reflns_obs 85.83 _refine_ls_shell.R_factor_R_free 0.363 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3RI8 _struct.title 'Xylanase C from Aspergillus kawachii D37N mutant' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RI8 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'beta-jellyroll, Hydrolase, Extracellular' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 12 ? GLY A 16 ? ASN A 11 GLY A 15 5 ? 5 HELX_P HELX_P2 2 ASN A 91 ? ALA A 96 ? ASN A 90 ALA A 95 1 ? 6 HELX_P HELX_P3 3 THR A 145 ? ALA A 154 ? THR A 144 ALA A 153 1 ? 10 HELX_P HELX_P4 4 GLN A 155 ? GLY A 157 ? GLN A 154 GLY A 156 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 93 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 112 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 92 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 111 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.002 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 76 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 75 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 77 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 76 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -13.23 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 7 ? TYR A 11 ? TYR A 6 TYR A 10 A 2 PHE A 39 ? TRP A 45 ? PHE A 38 TRP A 44 A 3 PHE A 163 ? SER A 174 ? PHE A 162 SER A 173 A 4 SER A 65 ? VAL A 74 ? SER A 64 VAL A 73 A 5 ALA A 79 ? TYR A 87 ? ALA A 78 TYR A 86 A 6 GLY A 124 ? ARG A 135 ? GLY A 123 ARG A 134 A 7 SER A 107 ? SER A 121 ? SER A 106 SER A 120 A 8 THR A 97 ? SER A 104 ? THR A 96 SER A 103 B 1 ASP A 17 ? ASP A 21 ? ASP A 16 ASP A 20 B 2 THR A 26 ? TYR A 30 ? THR A 25 TYR A 29 B 3 SER A 178 ? ILE A 183 ? SER A 177 ILE A 182 B 4 ILE A 53 ? SER A 60 ? ILE A 52 SER A 59 B 5 SER A 141 ? VAL A 144 ? SER A 140 VAL A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 11 ? N TYR A 10 O VAL A 40 ? O VAL A 39 A 2 3 N VAL A 41 ? N VAL A 40 O VAL A 170 ? O VAL A 169 A 3 4 O ALA A 169 ? O ALA A 168 N ALA A 69 ? N ALA A 68 A 4 5 N LEU A 68 ? N LEU A 67 O ASP A 86 ? O ASP A 85 A 5 6 N VAL A 84 ? N VAL A 83 O SER A 133 ? O SER A 132 A 6 7 O VAL A 134 ? O VAL A 133 N GLN A 110 ? N GLN A 109 A 7 8 O VAL A 111 ? O VAL A 110 N LEU A 99 ? N LEU A 98 B 1 2 N THR A 19 ? N THR A 18 O SER A 28 ? O SER A 27 B 2 3 N PHE A 27 ? N PHE A 26 O VAL A 181 ? O VAL A 180 B 3 4 O THR A 182 ? O THR A 181 N SER A 56 ? N SER A 55 B 4 5 N ILE A 53 ? N ILE A 52 O VAL A 144 ? O VAL A 143 # _database_PDB_matrix.entry_id 3RI8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RI8 _atom_sites.fract_transf_matrix[1][1] 0.016112 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016112 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008820 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 SER 2 1 ? ? ? A . n A 1 3 ALA 3 2 2 ALA ALA A . n A 1 4 GLY 4 3 3 GLY GLY A . n A 1 5 ILE 5 4 4 ILE ILE A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 TYR 7 6 6 TYR TYR A . n A 1 8 VAL 8 7 7 VAL VAL A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 ASN 10 9 9 ASN ASN A . n A 1 11 TYR 11 10 10 TYR TYR A . n A 1 12 ASN 12 11 11 ASN ASN A . n A 1 13 GLY 13 12 12 GLY GLY A . n A 1 14 ASN 14 13 13 ASN ASN A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 ASP 17 16 16 ASP ASP A . n A 1 18 PHE 18 17 17 PHE PHE A . n A 1 19 THR 19 18 18 THR THR A . n A 1 20 TYR 20 19 19 TYR TYR A . n A 1 21 ASP 21 20 20 ASP ASP A . n A 1 22 GLU 22 21 21 GLU GLU A . n A 1 23 SER 23 22 22 SER SER A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 THR 26 25 25 THR THR A . n A 1 27 PHE 27 26 26 PHE PHE A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 MET 29 28 28 MET MET A . n A 1 30 TYR 30 29 29 TYR TYR A . n A 1 31 TRP 31 30 30 TRP TRP A . n A 1 32 GLU 32 31 31 GLU GLU A . n A 1 33 ASP 33 32 32 ASP ASP A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 SER 37 36 36 SER SER A . n A 1 38 ASN 38 37 37 ASN ASN A . n A 1 39 PHE 39 38 38 PHE PHE A . n A 1 40 VAL 40 39 39 VAL VAL A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 LEU 43 42 42 LEU LEU A . n A 1 44 GLY 44 43 43 GLY GLY A . n A 1 45 TRP 45 44 44 TRP TRP A . n A 1 46 THR 46 45 45 THR THR A . n A 1 47 THR 47 46 46 THR THR A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 SER 50 49 49 SER SER A . n A 1 51 ASN 51 50 50 ASN ASN A . n A 1 52 ALA 52 51 51 ALA ALA A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 THR 54 53 53 THR THR A . n A 1 55 TYR 55 54 54 TYR TYR A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 ALA 57 56 56 ALA ALA A . n A 1 58 GLU 58 57 57 GLU GLU A . n A 1 59 TYR 59 58 58 TYR TYR A . n A 1 60 SER 60 59 59 SER SER A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 GLY 63 62 62 GLY GLY A . n A 1 64 SER 64 63 63 SER SER A . n A 1 65 SER 65 64 64 SER SER A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 TYR 67 66 66 TYR TYR A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 VAL 70 69 69 VAL VAL A . n A 1 71 TYR 71 70 70 TYR TYR A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 TRP 73 72 72 TRP TRP A . n A 1 74 VAL 74 73 73 VAL VAL A . n A 1 75 ASN 75 74 74 ASN ASN A . n A 1 76 TYR 76 75 75 TYR TYR A . n A 1 77 PRO 77 76 76 PRO PRO A . n A 1 78 GLN 78 77 77 GLN GLN A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 TYR 81 80 80 TYR TYR A . n A 1 82 TYR 82 81 81 TYR TYR A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 VAL 84 83 83 VAL VAL A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 ASP 86 85 85 ASP ASP A . n A 1 87 TYR 87 86 86 TYR TYR A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 ASP 89 88 88 ASP ASP A . n A 1 90 TYR 90 89 89 TYR TYR A . n A 1 91 ASN 91 90 90 ASN ASN A . n A 1 92 PRO 92 91 91 PRO PRO A . n A 1 93 CYS 93 92 92 CYS CYS A . n A 1 94 SER 94 93 93 SER SER A . n A 1 95 SER 95 94 94 SER SER A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 THR 97 96 96 THR THR A . n A 1 98 SER 98 97 97 SER SER A . n A 1 99 LEU 99 98 98 LEU LEU A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 THR 101 100 100 THR THR A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 TYR 103 102 102 TYR TYR A . n A 1 104 SER 104 103 103 SER SER A . n A 1 105 ASP 105 104 104 ASP ASP A . n A 1 106 GLY 106 105 105 GLY GLY A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 THR 108 107 107 THR THR A . n A 1 109 TYR 109 108 108 TYR TYR A . n A 1 110 GLN 110 109 109 GLN GLN A . n A 1 111 VAL 111 110 110 VAL VAL A . n A 1 112 CYS 112 111 111 CYS CYS A . n A 1 113 THR 113 112 112 THR THR A . n A 1 114 ASP 114 113 113 ASP ASP A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 ARG 116 115 115 ARG ARG A . n A 1 117 THR 117 116 116 THR THR A . n A 1 118 ASN 118 117 117 ASN ASN A . n A 1 119 GLU 119 118 118 GLU GLU A . n A 1 120 PRO 120 119 119 PRO PRO A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 ILE 122 121 121 ILE ILE A . n A 1 123 THR 123 122 122 THR THR A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 THR 125 124 124 THR THR A . n A 1 126 SER 126 125 125 SER SER A . n A 1 127 THR 127 126 126 THR THR A . n A 1 128 PHE 128 127 127 PHE PHE A . n A 1 129 THR 129 128 128 THR THR A . n A 1 130 GLN 130 129 129 GLN GLN A . n A 1 131 TYR 131 130 130 TYR TYR A . n A 1 132 PHE 132 131 131 PHE PHE A . n A 1 133 SER 133 132 132 SER SER A . n A 1 134 VAL 134 133 133 VAL VAL A . n A 1 135 ARG 135 134 134 ARG ARG A . n A 1 136 GLU 136 135 135 GLU GLU A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 THR 138 137 137 THR THR A . n A 1 139 ARG 139 138 138 ARG ARG A . n A 1 140 THR 140 139 139 THR THR A . n A 1 141 SER 141 140 140 SER SER A . n A 1 142 GLY 142 141 141 GLY GLY A . n A 1 143 THR 143 142 142 THR THR A . n A 1 144 VAL 144 143 143 VAL VAL A . n A 1 145 THR 145 144 144 THR THR A . n A 1 146 VAL 146 145 145 VAL VAL A . n A 1 147 ALA 147 146 146 ALA ALA A . n A 1 148 ASN 148 147 147 ASN ASN A . n A 1 149 HIS 149 148 148 HIS HIS A . n A 1 150 PHE 150 149 149 PHE PHE A . n A 1 151 ASN 151 150 150 ASN ASN A . n A 1 152 PHE 152 151 151 PHE PHE A . n A 1 153 TRP 153 152 152 TRP TRP A . n A 1 154 ALA 154 153 153 ALA ALA A . n A 1 155 GLN 155 154 154 GLN GLN A . n A 1 156 HIS 156 155 155 HIS HIS A . n A 1 157 GLY 157 156 156 GLY GLY A . n A 1 158 PHE 158 157 157 PHE PHE A . n A 1 159 GLY 159 158 158 GLY GLY A . n A 1 160 ASN 160 159 159 ASN ASN A . n A 1 161 SER 161 160 160 SER SER A . n A 1 162 ASP 162 161 161 ASP ASP A . n A 1 163 PHE 163 162 162 PHE PHE A . n A 1 164 ASN 164 163 163 ASN ASN A . n A 1 165 TYR 165 164 164 TYR TYR A . n A 1 166 GLN 166 165 165 GLN GLN A . n A 1 167 VAL 167 166 166 VAL VAL A . n A 1 168 MET 168 167 167 MET MET A . n A 1 169 ALA 169 168 168 ALA ALA A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 GLU 171 170 170 GLU GLU A . n A 1 172 ALA 172 171 171 ALA ALA A . n A 1 173 TRP 173 172 172 TRP TRP A . n A 1 174 SER 174 173 173 SER SER A . n A 1 175 GLY 175 174 174 GLY GLY A . n A 1 176 ALA 176 175 175 ALA ALA A . n A 1 177 GLY 177 176 176 GLY GLY A . n A 1 178 SER 178 177 177 SER SER A . n A 1 179 ALA 179 178 178 ALA ALA A . n A 1 180 SER 180 179 179 SER SER A . n A 1 181 VAL 181 180 180 VAL VAL A . n A 1 182 THR 182 181 181 THR THR A . n A 1 183 ILE 183 182 182 ILE ILE A . n A 1 184 SER 184 183 183 SER SER A . n A 1 185 SER 185 184 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 185 1 HOH HOH A . B 2 HOH 2 186 2 HOH HOH A . B 2 HOH 3 187 3 HOH HOH A . B 2 HOH 4 188 4 HOH HOH A . B 2 HOH 5 189 5 HOH HOH A . B 2 HOH 6 190 6 HOH HOH A . B 2 HOH 7 191 7 HOH HOH A . B 2 HOH 8 192 8 HOH HOH A . B 2 HOH 9 193 9 HOH HOH A . B 2 HOH 10 194 10 HOH HOH A . B 2 HOH 11 195 11 HOH HOH A . B 2 HOH 12 196 12 HOH HOH A . B 2 HOH 13 197 13 HOH HOH A . B 2 HOH 14 198 14 HOH HOH A . B 2 HOH 15 199 15 HOH HOH A . B 2 HOH 16 200 16 HOH HOH A . B 2 HOH 17 201 17 HOH HOH A . B 2 HOH 18 202 18 HOH HOH A . B 2 HOH 19 203 19 HOH HOH A . B 2 HOH 20 204 20 HOH HOH A . B 2 HOH 21 205 21 HOH HOH A . B 2 HOH 22 206 22 HOH HOH A . B 2 HOH 23 207 23 HOH HOH A . B 2 HOH 24 208 24 HOH HOH A . B 2 HOH 25 209 25 HOH HOH A . B 2 HOH 26 210 26 HOH HOH A . B 2 HOH 27 211 27 HOH HOH A . B 2 HOH 28 212 28 HOH HOH A . B 2 HOH 29 213 29 HOH HOH A . B 2 HOH 30 214 30 HOH HOH A . B 2 HOH 31 215 31 HOH HOH A . B 2 HOH 32 216 32 HOH HOH A . B 2 HOH 33 217 33 HOH HOH A . B 2 HOH 34 218 34 HOH HOH A . B 2 HOH 35 219 35 HOH HOH A . B 2 HOH 36 220 36 HOH HOH A . B 2 HOH 37 221 37 HOH HOH A . B 2 HOH 38 222 38 HOH HOH A . B 2 HOH 39 223 39 HOH HOH A . B 2 HOH 40 224 40 HOH HOH A . B 2 HOH 41 225 41 HOH HOH A . B 2 HOH 42 226 42 HOH HOH A . B 2 HOH 43 227 43 HOH HOH A . B 2 HOH 44 228 44 HOH HOH A . B 2 HOH 45 229 45 HOH HOH A . B 2 HOH 46 230 46 HOH HOH A . B 2 HOH 47 231 47 HOH HOH A . B 2 HOH 48 232 48 HOH HOH A . B 2 HOH 49 233 49 HOH HOH A . B 2 HOH 50 234 50 HOH HOH A . B 2 HOH 51 235 51 HOH HOH A . B 2 HOH 52 236 52 HOH HOH A . B 2 HOH 53 237 53 HOH HOH A . B 2 HOH 54 238 54 HOH HOH A . B 2 HOH 55 239 55 HOH HOH A . B 2 HOH 56 240 56 HOH HOH A . B 2 HOH 57 241 57 HOH HOH A . B 2 HOH 58 242 58 HOH HOH A . B 2 HOH 59 243 59 HOH HOH A . B 2 HOH 60 244 60 HOH HOH A . B 2 HOH 61 245 61 HOH HOH A . B 2 HOH 62 246 62 HOH HOH A . B 2 HOH 63 247 63 HOH HOH A . B 2 HOH 64 248 64 HOH HOH A . B 2 HOH 65 249 65 HOH HOH A . B 2 HOH 66 250 66 HOH HOH A . B 2 HOH 67 251 67 HOH HOH A . B 2 HOH 68 252 68 HOH HOH A . B 2 HOH 69 253 69 HOH HOH A . B 2 HOH 70 254 70 HOH HOH A . B 2 HOH 71 255 71 HOH HOH A . B 2 HOH 72 256 72 HOH HOH A . B 2 HOH 73 257 73 HOH HOH A . B 2 HOH 74 258 74 HOH HOH A . B 2 HOH 75 259 75 HOH HOH A . B 2 HOH 76 260 76 HOH HOH A . B 2 HOH 77 261 77 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-12 2 'Structure model' 1 1 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 REFMAC refinement 5.5.0109 ? 2 SCALEPACK 'data scaling' . ? 3 # _pdbx_entry_details.sequence_details 'SWISSPROT CONTAINS ERRORS AT THESE POSITIONS' _pdbx_entry_details.entry_id 3RI8 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 20 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 20 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 20 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.07 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.77 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 60 ? ? -156.49 32.92 2 1 ASN A 117 ? ? 34.09 60.08 3 1 ASN A 163 ? ? -101.43 -145.68 4 1 SER A 173 ? ? -176.03 149.50 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A SER 1 ? A SER 2 3 1 Y 1 A SER 184 ? A SER 185 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 MET N N N N 205 MET CA C N S 206 MET C C N N 207 MET O O N N 208 MET CB C N N 209 MET CG C N N 210 MET SD S N N 211 MET CE C N N 212 MET OXT O N N 213 MET H H N N 214 MET H2 H N N 215 MET HA H N N 216 MET HB2 H N N 217 MET HB3 H N N 218 MET HG2 H N N 219 MET HG3 H N N 220 MET HE1 H N N 221 MET HE2 H N N 222 MET HE3 H N N 223 MET HXT H N N 224 PHE N N N N 225 PHE CA C N S 226 PHE C C N N 227 PHE O O N N 228 PHE CB C N N 229 PHE CG C Y N 230 PHE CD1 C Y N 231 PHE CD2 C Y N 232 PHE CE1 C Y N 233 PHE CE2 C Y N 234 PHE CZ C Y N 235 PHE OXT O N N 236 PHE H H N N 237 PHE H2 H N N 238 PHE HA H N N 239 PHE HB2 H N N 240 PHE HB3 H N N 241 PHE HD1 H N N 242 PHE HD2 H N N 243 PHE HE1 H N N 244 PHE HE2 H N N 245 PHE HZ H N N 246 PHE HXT H N N 247 PRO N N N N 248 PRO CA C N S 249 PRO C C N N 250 PRO O O N N 251 PRO CB C N N 252 PRO CG C N N 253 PRO CD C N N 254 PRO OXT O N N 255 PRO H H N N 256 PRO HA H N N 257 PRO HB2 H N N 258 PRO HB3 H N N 259 PRO HG2 H N N 260 PRO HG3 H N N 261 PRO HD2 H N N 262 PRO HD3 H N N 263 PRO HXT H N N 264 SER N N N N 265 SER CA C N S 266 SER C C N N 267 SER O O N N 268 SER CB C N N 269 SER OG O N N 270 SER OXT O N N 271 SER H H N N 272 SER H2 H N N 273 SER HA H N N 274 SER HB2 H N N 275 SER HB3 H N N 276 SER HG H N N 277 SER HXT H N N 278 THR N N N N 279 THR CA C N S 280 THR C C N N 281 THR O O N N 282 THR CB C N R 283 THR OG1 O N N 284 THR CG2 C N N 285 THR OXT O N N 286 THR H H N N 287 THR H2 H N N 288 THR HA H N N 289 THR HB H N N 290 THR HG1 H N N 291 THR HG21 H N N 292 THR HG22 H N N 293 THR HG23 H N N 294 THR HXT H N N 295 TRP N N N N 296 TRP CA C N S 297 TRP C C N N 298 TRP O O N N 299 TRP CB C N N 300 TRP CG C Y N 301 TRP CD1 C Y N 302 TRP CD2 C Y N 303 TRP NE1 N Y N 304 TRP CE2 C Y N 305 TRP CE3 C Y N 306 TRP CZ2 C Y N 307 TRP CZ3 C Y N 308 TRP CH2 C Y N 309 TRP OXT O N N 310 TRP H H N N 311 TRP H2 H N N 312 TRP HA H N N 313 TRP HB2 H N N 314 TRP HB3 H N N 315 TRP HD1 H N N 316 TRP HE1 H N N 317 TRP HE3 H N N 318 TRP HZ2 H N N 319 TRP HZ3 H N N 320 TRP HH2 H N N 321 TRP HXT H N N 322 TYR N N N N 323 TYR CA C N S 324 TYR C C N N 325 TYR O O N N 326 TYR CB C N N 327 TYR CG C Y N 328 TYR CD1 C Y N 329 TYR CD2 C Y N 330 TYR CE1 C Y N 331 TYR CE2 C Y N 332 TYR CZ C Y N 333 TYR OH O N N 334 TYR OXT O N N 335 TYR H H N N 336 TYR H2 H N N 337 TYR HA H N N 338 TYR HB2 H N N 339 TYR HB3 H N N 340 TYR HD1 H N N 341 TYR HD2 H N N 342 TYR HE1 H N N 343 TYR HE2 H N N 344 TYR HH H N N 345 TYR HXT H N N 346 VAL N N N N 347 VAL CA C N S 348 VAL C C N N 349 VAL O O N N 350 VAL CB C N N 351 VAL CG1 C N N 352 VAL CG2 C N N 353 VAL OXT O N N 354 VAL H H N N 355 VAL H2 H N N 356 VAL HA H N N 357 VAL HB H N N 358 VAL HG11 H N N 359 VAL HG12 H N N 360 VAL HG13 H N N 361 VAL HG21 H N N 362 VAL HG22 H N N 363 VAL HG23 H N N 364 VAL HXT H N N 365 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 MET N CA sing N N 194 MET N H sing N N 195 MET N H2 sing N N 196 MET CA C sing N N 197 MET CA CB sing N N 198 MET CA HA sing N N 199 MET C O doub N N 200 MET C OXT sing N N 201 MET CB CG sing N N 202 MET CB HB2 sing N N 203 MET CB HB3 sing N N 204 MET CG SD sing N N 205 MET CG HG2 sing N N 206 MET CG HG3 sing N N 207 MET SD CE sing N N 208 MET CE HE1 sing N N 209 MET CE HE2 sing N N 210 MET CE HE3 sing N N 211 MET OXT HXT sing N N 212 PHE N CA sing N N 213 PHE N H sing N N 214 PHE N H2 sing N N 215 PHE CA C sing N N 216 PHE CA CB sing N N 217 PHE CA HA sing N N 218 PHE C O doub N N 219 PHE C OXT sing N N 220 PHE CB CG sing N N 221 PHE CB HB2 sing N N 222 PHE CB HB3 sing N N 223 PHE CG CD1 doub Y N 224 PHE CG CD2 sing Y N 225 PHE CD1 CE1 sing Y N 226 PHE CD1 HD1 sing N N 227 PHE CD2 CE2 doub Y N 228 PHE CD2 HD2 sing N N 229 PHE CE1 CZ doub Y N 230 PHE CE1 HE1 sing N N 231 PHE CE2 CZ sing Y N 232 PHE CE2 HE2 sing N N 233 PHE CZ HZ sing N N 234 PHE OXT HXT sing N N 235 PRO N CA sing N N 236 PRO N CD sing N N 237 PRO N H sing N N 238 PRO CA C sing N N 239 PRO CA CB sing N N 240 PRO CA HA sing N N 241 PRO C O doub N N 242 PRO C OXT sing N N 243 PRO CB CG sing N N 244 PRO CB HB2 sing N N 245 PRO CB HB3 sing N N 246 PRO CG CD sing N N 247 PRO CG HG2 sing N N 248 PRO CG HG3 sing N N 249 PRO CD HD2 sing N N 250 PRO CD HD3 sing N N 251 PRO OXT HXT sing N N 252 SER N CA sing N N 253 SER N H sing N N 254 SER N H2 sing N N 255 SER CA C sing N N 256 SER CA CB sing N N 257 SER CA HA sing N N 258 SER C O doub N N 259 SER C OXT sing N N 260 SER CB OG sing N N 261 SER CB HB2 sing N N 262 SER CB HB3 sing N N 263 SER OG HG sing N N 264 SER OXT HXT sing N N 265 THR N CA sing N N 266 THR N H sing N N 267 THR N H2 sing N N 268 THR CA C sing N N 269 THR CA CB sing N N 270 THR CA HA sing N N 271 THR C O doub N N 272 THR C OXT sing N N 273 THR CB OG1 sing N N 274 THR CB CG2 sing N N 275 THR CB HB sing N N 276 THR OG1 HG1 sing N N 277 THR CG2 HG21 sing N N 278 THR CG2 HG22 sing N N 279 THR CG2 HG23 sing N N 280 THR OXT HXT sing N N 281 TRP N CA sing N N 282 TRP N H sing N N 283 TRP N H2 sing N N 284 TRP CA C sing N N 285 TRP CA CB sing N N 286 TRP CA HA sing N N 287 TRP C O doub N N 288 TRP C OXT sing N N 289 TRP CB CG sing N N 290 TRP CB HB2 sing N N 291 TRP CB HB3 sing N N 292 TRP CG CD1 doub Y N 293 TRP CG CD2 sing Y N 294 TRP CD1 NE1 sing Y N 295 TRP CD1 HD1 sing N N 296 TRP CD2 CE2 doub Y N 297 TRP CD2 CE3 sing Y N 298 TRP NE1 CE2 sing Y N 299 TRP NE1 HE1 sing N N 300 TRP CE2 CZ2 sing Y N 301 TRP CE3 CZ3 doub Y N 302 TRP CE3 HE3 sing N N 303 TRP CZ2 CH2 doub Y N 304 TRP CZ2 HZ2 sing N N 305 TRP CZ3 CH2 sing Y N 306 TRP CZ3 HZ3 sing N N 307 TRP CH2 HH2 sing N N 308 TRP OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BK1 _pdbx_initial_refinement_model.details 'PDB ENTRY 1BK1' #