data_3RJZ # _entry.id 3RJZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3RJZ RCSB RCSB065025 WWPDB D_1000065025 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2011-06-01 _pdbx_database_PDB_obs_spr.pdb_id 3RJZ _pdbx_database_PDB_obs_spr.replace_pdb_id 1RU8 _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetDB PfR23 . unspecified PDB 3RK0 'This is the AMP-bound structure' unspecified PDB 3RK1 'This is the ATP-bound structure' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RJZ _pdbx_database_status.recvd_initial_deposition_date 2011-04-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Forouhar, F.' 1 'Lee, I.' 2 'Xiao, R.' 3 'Acton, T.B.' 4 'Montelione, G.T.' 5 'Hunt, J.' 6 'Tong, L.' 7 'Northeast Structural Genomics Consortium (NESG)' 8 # _citation.id primary _citation.title 'A large conformational change in the putative ATP pyrophosphatase PF0828 induced by ATP binding.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 67 _citation.page_first 1323 _citation.page_last 1327 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22102225 _citation.pdbx_database_id_DOI 10.1107/S1744309111031447 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Forouhar, F.' 1 primary 'Saadat, N.' 2 primary 'Hussain, M.' 3 primary 'Seetharaman, J.' 4 primary 'Lee, I.' 5 primary 'Janjua, H.' 6 primary 'Xiao, R.' 7 primary 'Shastry, R.' 8 primary 'Acton, T.B.' 9 primary 'Montelione, G.T.' 10 primary 'Tong, L.' 11 # _cell.entry_id 3RJZ _cell.length_a 85.036 _cell.length_b 85.036 _cell.length_c 74.502 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RJZ _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'N-type ATP pyrophosphatase superfamily' 27107.328 1 ? ? ? ? 2 water nat water 18.015 85 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)VGLADVAVLYSGGKDSNYALYWAIKNRFSVKFLVT(MSE)VSENEESY(MSE)YHTINANLTDLQARALGIPLVK GFTQGEKEKEVEDLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELGLEVYTPAWGRDAKEY(MSE)RELLNLGFKI (MSE)VVGVSAYGLDESWLGRILDESALEELITLNEKYKVHVAGEGGEFETFVLD(MSE)PLFKYKIVVDKAKKVWEPCT SSGKLIIEEAHLESKLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MVGLADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVE DLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELGLEVYTPAWGRDAKEYMRELLNLGFKIMVVGVSAYGLDESWLGRI LDESALEELITLNEKYKVHVAGEGGEFETFVLDMPLFKYKIVVDKAKKVWEPCTSSGKLIIEEAHLESKLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier PfR23 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 VAL n 1 3 GLY n 1 4 LEU n 1 5 ALA n 1 6 ASP n 1 7 VAL n 1 8 ALA n 1 9 VAL n 1 10 LEU n 1 11 TYR n 1 12 SER n 1 13 GLY n 1 14 GLY n 1 15 LYS n 1 16 ASP n 1 17 SER n 1 18 ASN n 1 19 TYR n 1 20 ALA n 1 21 LEU n 1 22 TYR n 1 23 TRP n 1 24 ALA n 1 25 ILE n 1 26 LYS n 1 27 ASN n 1 28 ARG n 1 29 PHE n 1 30 SER n 1 31 VAL n 1 32 LYS n 1 33 PHE n 1 34 LEU n 1 35 VAL n 1 36 THR n 1 37 MSE n 1 38 VAL n 1 39 SER n 1 40 GLU n 1 41 ASN n 1 42 GLU n 1 43 GLU n 1 44 SER n 1 45 TYR n 1 46 MSE n 1 47 TYR n 1 48 HIS n 1 49 THR n 1 50 ILE n 1 51 ASN n 1 52 ALA n 1 53 ASN n 1 54 LEU n 1 55 THR n 1 56 ASP n 1 57 LEU n 1 58 GLN n 1 59 ALA n 1 60 ARG n 1 61 ALA n 1 62 LEU n 1 63 GLY n 1 64 ILE n 1 65 PRO n 1 66 LEU n 1 67 VAL n 1 68 LYS n 1 69 GLY n 1 70 PHE n 1 71 THR n 1 72 GLN n 1 73 GLY n 1 74 GLU n 1 75 LYS n 1 76 GLU n 1 77 LYS n 1 78 GLU n 1 79 VAL n 1 80 GLU n 1 81 ASP n 1 82 LEU n 1 83 LYS n 1 84 ARG n 1 85 VAL n 1 86 LEU n 1 87 SER n 1 88 GLY n 1 89 LEU n 1 90 LYS n 1 91 ILE n 1 92 GLN n 1 93 GLY n 1 94 ILE n 1 95 VAL n 1 96 ALA n 1 97 GLY n 1 98 ALA n 1 99 LEU n 1 100 ALA n 1 101 SER n 1 102 LYS n 1 103 TYR n 1 104 GLN n 1 105 ARG n 1 106 LYS n 1 107 ARG n 1 108 ILE n 1 109 GLU n 1 110 LYS n 1 111 VAL n 1 112 ALA n 1 113 LYS n 1 114 GLU n 1 115 LEU n 1 116 GLY n 1 117 LEU n 1 118 GLU n 1 119 VAL n 1 120 TYR n 1 121 THR n 1 122 PRO n 1 123 ALA n 1 124 TRP n 1 125 GLY n 1 126 ARG n 1 127 ASP n 1 128 ALA n 1 129 LYS n 1 130 GLU n 1 131 TYR n 1 132 MSE n 1 133 ARG n 1 134 GLU n 1 135 LEU n 1 136 LEU n 1 137 ASN n 1 138 LEU n 1 139 GLY n 1 140 PHE n 1 141 LYS n 1 142 ILE n 1 143 MSE n 1 144 VAL n 1 145 VAL n 1 146 GLY n 1 147 VAL n 1 148 SER n 1 149 ALA n 1 150 TYR n 1 151 GLY n 1 152 LEU n 1 153 ASP n 1 154 GLU n 1 155 SER n 1 156 TRP n 1 157 LEU n 1 158 GLY n 1 159 ARG n 1 160 ILE n 1 161 LEU n 1 162 ASP n 1 163 GLU n 1 164 SER n 1 165 ALA n 1 166 LEU n 1 167 GLU n 1 168 GLU n 1 169 LEU n 1 170 ILE n 1 171 THR n 1 172 LEU n 1 173 ASN n 1 174 GLU n 1 175 LYS n 1 176 TYR n 1 177 LYS n 1 178 VAL n 1 179 HIS n 1 180 VAL n 1 181 ALA n 1 182 GLY n 1 183 GLU n 1 184 GLY n 1 185 GLY n 1 186 GLU n 1 187 PHE n 1 188 GLU n 1 189 THR n 1 190 PHE n 1 191 VAL n 1 192 LEU n 1 193 ASP n 1 194 MSE n 1 195 PRO n 1 196 LEU n 1 197 PHE n 1 198 LYS n 1 199 TYR n 1 200 LYS n 1 201 ILE n 1 202 VAL n 1 203 VAL n 1 204 ASP n 1 205 LYS n 1 206 ALA n 1 207 LYS n 1 208 LYS n 1 209 VAL n 1 210 TRP n 1 211 GLU n 1 212 PRO n 1 213 CYS n 1 214 THR n 1 215 SER n 1 216 SER n 1 217 GLY n 1 218 LYS n 1 219 LEU n 1 220 ILE n 1 221 ILE n 1 222 GLU n 1 223 GLU n 1 224 ALA n 1 225 HIS n 1 226 LEU n 1 227 GLU n 1 228 SER n 1 229 LYS n 1 230 LEU n 1 231 GLU n 1 232 HIS n 1 233 HIS n 1 234 HIS n 1 235 HIS n 1 236 HIS n 1 237 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PF0828 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 3638' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus furiosus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 186497 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8U2K6_PYRFU _struct_ref.pdbx_db_accession Q8U2K6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVGLADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVE DLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELGLEVYTPAWGRDAKEYMRELLNLGFKIMVVGVSAYGLDESWLGRI LDESALEELITLNEKYKVHVAGEGGEFETFVLDMPLFKYKIVVDKAKKVWEPCTSSGKLIIEEAHLESK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RJZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 229 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8U2K6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 229 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 229 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RJZ LEU A 230 ? UNP Q8U2K6 ? ? 'EXPRESSION TAG' 230 1 1 3RJZ GLU A 231 ? UNP Q8U2K6 ? ? 'EXPRESSION TAG' 231 2 1 3RJZ HIS A 232 ? UNP Q8U2K6 ? ? 'EXPRESSION TAG' 232 3 1 3RJZ HIS A 233 ? UNP Q8U2K6 ? ? 'EXPRESSION TAG' 233 4 1 3RJZ HIS A 234 ? UNP Q8U2K6 ? ? 'EXPRESSION TAG' 234 5 1 3RJZ HIS A 235 ? UNP Q8U2K6 ? ? 'EXPRESSION TAG' 235 6 1 3RJZ HIS A 236 ? UNP Q8U2K6 ? ? 'EXPRESSION TAG' 236 7 1 3RJZ HIS A 237 ? UNP Q8U2K6 ? ? 'EXPRESSION TAG' 237 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RJZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_percent_sol 50.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;Protein solution: 10 mM Tris (pH 7.5), 100 mM sodium chloride, 5 mM DTT, and 0.02% NaN3. Reservoir solution: 380 mM K/NaTartrate, , VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-06-16 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92927 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.92927 # _reflns.entry_id 3RJZ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.30 _reflns.number_obs 23091 _reflns.number_all 23183 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value 0.072 _reflns.pdbx_netI_over_sigmaI 26.9 _reflns.B_iso_Wilson_estimate 17.4 _reflns.pdbx_redundancy 6.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.247 _reflns_shell.pdbx_Rsym_value 0.220 _reflns_shell.meanI_over_sigI_obs 6.1 _reflns_shell.pdbx_redundancy 4.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2300 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RJZ _refine.ls_number_reflns_obs 21129 _refine.ls_number_reflns_all 23142 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 267007.46 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.93 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 91.3 _refine.ls_R_factor_obs 0.239 _refine.ls_R_factor_all 0.242 _refine.ls_R_factor_R_work 0.239 _refine.ls_R_factor_R_free 0.273 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.3 _refine.ls_number_reflns_R_free 1971 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 34.3 _refine.aniso_B[1][1] 2.76 _refine.aniso_B[2][2] 2.76 _refine.aniso_B[3][3] -5.53 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 49.7501 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3RJZ _refine_analyze.Luzzati_coordinate_error_obs 0.30 _refine_analyze.Luzzati_sigma_a_obs 0.20 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.39 _refine_analyze.Luzzati_sigma_a_free 0.32 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1649 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 85 _refine_hist.number_atoms_total 1734 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 19.93 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.008 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.1 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 23.6 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 0.68 ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.38 _refine_ls_shell.number_reflns_R_work 1599 _refine_ls_shell.R_factor_R_work 0.227 _refine_ls_shell.percent_reflns_obs 75.8 _refine_ls_shell.R_factor_R_free 0.297 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free 8.6 _refine_ls_shell.number_reflns_R_free 150 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1599 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3RJZ _struct.title ;X-ray crystal structure of the putative n-type atp pyrophosphatase from pyrococcus furiosus, the northeast structural genomics target pfr23 ; _struct.pdbx_descriptor 'N-type ATP pyrophosphatase superfamily' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RJZ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Structural Genomics, PSI-Biology, Northeast Structural Genomics Consortium, NESG, alpha-beta protein, n-type ATP pyrophosphatase, HYDROLASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? ASN A 27 ? GLY A 14 ASN A 27 1 ? 14 HELX_P HELX_P2 2 ASN A 53 ? GLY A 63 ? ASN A 53 GLY A 63 1 ? 11 HELX_P HELX_P3 3 GLU A 78 ? SER A 87 ? GLU A 78 SER A 87 1 ? 10 HELX_P HELX_P4 4 TYR A 103 ? LEU A 115 ? TYR A 103 LEU A 115 1 ? 13 HELX_P HELX_P5 5 ASP A 127 ? LEU A 138 ? ASP A 127 LEU A 138 1 ? 12 HELX_P HELX_P6 6 ASP A 153 ? LEU A 157 ? ASP A 153 LEU A 157 5 ? 5 HELX_P HELX_P7 7 ASP A 162 ? LYS A 177 ? ASP A 162 LYS A 177 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A THR 36 C ? ? ? 1_555 A MSE 37 N ? ? A THR 36 A MSE 37 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 37 C ? ? ? 1_555 A VAL 38 N ? ? A MSE 37 A VAL 38 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A TYR 131 C ? ? ? 1_555 A MSE 132 N ? ? A TYR 131 A MSE 132 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A MSE 132 C ? ? ? 1_555 A ARG 133 N ? ? A MSE 132 A ARG 133 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? A ILE 142 C ? ? ? 1_555 A MSE 143 N ? ? A ILE 142 A MSE 143 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? A MSE 143 C ? ? ? 1_555 A VAL 144 N ? ? A MSE 143 A VAL 144 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? A ASP 193 C ? ? ? 1_555 A MSE 194 N ? ? A ASP 193 A MSE 194 1_555 ? ? ? ? ? ? ? 1.321 ? covale8 covale ? ? A MSE 194 C ? ? ? 1_555 A PRO 195 N ? ? A MSE 194 A PRO 195 1_555 ? ? ? ? ? ? ? 1.340 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 66 ? THR A 71 ? LEU A 66 THR A 71 A 2 SER A 30 ? SER A 39 ? SER A 30 SER A 39 A 3 ASP A 6 ? LEU A 10 ? ASP A 6 LEU A 10 A 4 GLY A 93 ? VAL A 95 ? GLY A 93 VAL A 95 A 5 GLU A 118 ? TYR A 120 ? GLU A 118 TYR A 120 B 1 PHE A 187 ? ASP A 193 ? PHE A 187 ASP A 193 B 2 LYS A 141 ? SER A 148 ? LYS A 141 SER A 148 B 3 SER A 216 ? SER A 228 ? SER A 216 SER A 228 B 4 TYR A 199 ? VAL A 209 ? TYR A 199 VAL A 209 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 67 ? O VAL A 67 N LEU A 34 ? N LEU A 34 A 2 3 O VAL A 35 ? O VAL A 35 N VAL A 9 ? N VAL A 9 A 3 4 N LEU A 10 ? N LEU A 10 O VAL A 95 ? O VAL A 95 A 4 5 N ILE A 94 ? N ILE A 94 O TYR A 120 ? O TYR A 120 B 1 2 O GLU A 188 ? O GLU A 188 N VAL A 145 ? N VAL A 145 B 2 3 N VAL A 147 ? N VAL A 147 O GLY A 217 ? O GLY A 217 B 3 4 O HIS A 225 ? O HIS A 225 N VAL A 202 ? N VAL A 202 # _database_PDB_matrix.entry_id 3RJZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RJZ _atom_sites.fract_transf_matrix[1][1] 0.011760 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011760 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013422 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 VAL 2 2 ? ? ? A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 MSE 37 37 37 MSE MSE A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 ASN 41 41 ? ? ? A . n A 1 42 GLU 42 42 ? ? ? A . n A 1 43 GLU 43 43 ? ? ? A . n A 1 44 SER 44 44 ? ? ? A . n A 1 45 TYR 45 45 ? ? ? A . n A 1 46 MSE 46 46 ? ? ? A . n A 1 47 TYR 47 47 ? ? ? A . n A 1 48 HIS 48 48 ? ? ? A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 GLN 72 72 ? ? ? A . n A 1 73 GLY 73 73 ? ? ? A . n A 1 74 GLU 74 74 ? ? ? A . n A 1 75 LYS 75 75 ? ? ? A . n A 1 76 GLU 76 76 ? ? ? A . n A 1 77 LYS 77 77 ? ? ? A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 ALA 98 98 ? ? ? A . n A 1 99 LEU 99 99 ? ? ? A . n A 1 100 ALA 100 100 ? ? ? A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 TYR 103 103 103 TYR TYR A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 TYR 120 120 120 TYR TYR A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 TRP 124 124 124 TRP TRP A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 MSE 132 132 132 MSE MSE A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 MSE 143 143 143 MSE MSE A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 SER 148 148 148 SER SER A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 TRP 156 156 156 TRP TRP A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 ARG 159 159 159 ARG ARG A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 GLU 167 167 167 GLU GLU A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 ASN 173 173 173 ASN ASN A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 TYR 176 176 176 TYR TYR A . n A 1 177 LYS 177 177 177 LYS LYS A . n A 1 178 VAL 178 178 178 VAL VAL A . n A 1 179 HIS 179 179 179 HIS HIS A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 PHE 187 187 187 PHE PHE A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 PHE 190 190 190 PHE PHE A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 MSE 194 194 194 MSE MSE A . n A 1 195 PRO 195 195 195 PRO PRO A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 LYS 198 198 198 LYS LYS A . n A 1 199 TYR 199 199 199 TYR TYR A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 VAL 202 202 202 VAL VAL A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 LYS 205 205 205 LYS LYS A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 TRP 210 210 ? ? ? A . n A 1 211 GLU 211 211 ? ? ? A . n A 1 212 PRO 212 212 212 PRO PRO A . n A 1 213 CYS 213 213 213 CYS CYS A . n A 1 214 THR 214 214 214 THR THR A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 LYS 218 218 218 LYS LYS A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 ILE 220 220 220 ILE ILE A . n A 1 221 ILE 221 221 221 ILE ILE A . n A 1 222 GLU 222 222 222 GLU GLU A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 HIS 225 225 225 HIS HIS A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 GLU 227 227 227 GLU GLU A . n A 1 228 SER 228 228 228 SER SER A . n A 1 229 LYS 229 229 229 LYS LYS A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 HIS 232 232 ? ? ? A . n A 1 233 HIS 233 233 ? ? ? A . n A 1 234 HIS 234 234 ? ? ? A . n A 1 235 HIS 235 235 ? ? ? A . n A 1 236 HIS 236 236 ? ? ? A . n A 1 237 HIS 237 237 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 37 A MSE 37 ? MET SELENOMETHIONINE 2 A MSE 132 A MSE 132 ? MET SELENOMETHIONINE 3 A MSE 143 A MSE 143 ? MET SELENOMETHIONINE 4 A MSE 194 A MSE 194 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1960 ? 1 MORE -8 ? 1 'SSA (A^2)' 20110 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 85.0360000000 -1.0000000000 0.0000000000 0.0000000000 85.0360000000 0.0000000000 0.0000000000 -1.0000000000 37.2510000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-01-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SnB phasing 'then SOLVE/RESOLVE' ? 2 CNS refinement '1.2 & XtalView' ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 124 ? ? -136.31 -95.83 2 1 SER A 148 ? ? -146.95 58.35 3 1 LYS A 175 ? ? -136.70 -60.25 4 1 THR A 214 ? ? -82.46 -134.43 5 1 SER A 215 ? ? -150.02 26.03 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A VAL 2 ? A VAL 2 3 1 Y 1 A ASN 41 ? A ASN 41 4 1 Y 1 A GLU 42 ? A GLU 42 5 1 Y 1 A GLU 43 ? A GLU 43 6 1 Y 1 A SER 44 ? A SER 44 7 1 Y 1 A TYR 45 ? A TYR 45 8 1 Y 1 A MSE 46 ? A MSE 46 9 1 Y 1 A TYR 47 ? A TYR 47 10 1 Y 1 A HIS 48 ? A HIS 48 11 1 Y 1 A GLN 72 ? A GLN 72 12 1 Y 1 A GLY 73 ? A GLY 73 13 1 Y 1 A GLU 74 ? A GLU 74 14 1 Y 1 A LYS 75 ? A LYS 75 15 1 Y 1 A GLU 76 ? A GLU 76 16 1 Y 1 A LYS 77 ? A LYS 77 17 1 Y 1 A ALA 98 ? A ALA 98 18 1 Y 1 A LEU 99 ? A LEU 99 19 1 Y 1 A ALA 100 ? A ALA 100 20 1 Y 1 A TRP 210 ? A TRP 210 21 1 Y 1 A GLU 211 ? A GLU 211 22 1 Y 1 A HIS 232 ? A HIS 232 23 1 Y 1 A HIS 233 ? A HIS 233 24 1 Y 1 A HIS 234 ? A HIS 234 25 1 Y 1 A HIS 235 ? A HIS 235 26 1 Y 1 A HIS 236 ? A HIS 236 27 1 Y 1 A HIS 237 ? A HIS 237 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 301 HOH HOH A . B 2 HOH 2 302 302 HOH HOH A . B 2 HOH 3 303 303 HOH HOH A . B 2 HOH 4 304 304 HOH HOH A . B 2 HOH 5 305 305 HOH HOH A . B 2 HOH 6 306 306 HOH HOH A . B 2 HOH 7 307 307 HOH HOH A . B 2 HOH 8 308 308 HOH HOH A . B 2 HOH 9 309 309 HOH HOH A . B 2 HOH 10 310 310 HOH HOH A . B 2 HOH 11 311 311 HOH HOH A . B 2 HOH 12 312 312 HOH HOH A . B 2 HOH 13 313 313 HOH HOH A . B 2 HOH 14 314 314 HOH HOH A . B 2 HOH 15 315 315 HOH HOH A . B 2 HOH 16 316 316 HOH HOH A . B 2 HOH 17 317 317 HOH HOH A . B 2 HOH 18 318 318 HOH HOH A . B 2 HOH 19 319 319 HOH HOH A . B 2 HOH 20 320 320 HOH HOH A . B 2 HOH 21 321 321 HOH HOH A . B 2 HOH 22 322 322 HOH HOH A . B 2 HOH 23 323 323 HOH HOH A . B 2 HOH 24 324 324 HOH HOH A . B 2 HOH 25 325 325 HOH HOH A . B 2 HOH 26 326 326 HOH HOH A . B 2 HOH 27 327 327 HOH HOH A . B 2 HOH 28 328 328 HOH HOH A . B 2 HOH 29 329 329 HOH HOH A . B 2 HOH 30 330 330 HOH HOH A . B 2 HOH 31 331 331 HOH HOH A . B 2 HOH 32 332 332 HOH HOH A . B 2 HOH 33 333 333 HOH HOH A . B 2 HOH 34 334 334 HOH HOH A . B 2 HOH 35 335 335 HOH HOH A . B 2 HOH 36 336 336 HOH HOH A . B 2 HOH 37 337 337 HOH HOH A . B 2 HOH 38 338 338 HOH HOH A . B 2 HOH 39 339 339 HOH HOH A . B 2 HOH 40 340 340 HOH HOH A . B 2 HOH 41 341 341 HOH HOH A . B 2 HOH 42 342 342 HOH HOH A . B 2 HOH 43 343 343 HOH HOH A . B 2 HOH 44 344 344 HOH HOH A . B 2 HOH 45 345 345 HOH HOH A . B 2 HOH 46 346 346 HOH HOH A . B 2 HOH 47 347 347 HOH HOH A . B 2 HOH 48 348 348 HOH HOH A . B 2 HOH 49 349 349 HOH HOH A . B 2 HOH 50 350 350 HOH HOH A . B 2 HOH 51 351 351 HOH HOH A . B 2 HOH 52 352 352 HOH HOH A . B 2 HOH 53 353 353 HOH HOH A . B 2 HOH 54 354 354 HOH HOH A . B 2 HOH 55 355 355 HOH HOH A . B 2 HOH 56 356 356 HOH HOH A . B 2 HOH 57 357 357 HOH HOH A . B 2 HOH 58 358 358 HOH HOH A . B 2 HOH 59 359 359 HOH HOH A . B 2 HOH 60 360 360 HOH HOH A . B 2 HOH 61 361 361 HOH HOH A . B 2 HOH 62 362 362 HOH HOH A . B 2 HOH 63 363 363 HOH HOH A . B 2 HOH 64 364 364 HOH HOH A . B 2 HOH 65 365 365 HOH HOH A . B 2 HOH 66 366 366 HOH HOH A . B 2 HOH 67 367 367 HOH HOH A . B 2 HOH 68 368 368 HOH HOH A . B 2 HOH 69 369 369 HOH HOH A . B 2 HOH 70 370 370 HOH HOH A . B 2 HOH 71 371 371 HOH HOH A . B 2 HOH 72 372 372 HOH HOH A . B 2 HOH 73 373 373 HOH HOH A . B 2 HOH 74 374 374 HOH HOH A . B 2 HOH 75 375 375 HOH HOH A . B 2 HOH 76 376 376 HOH HOH A . B 2 HOH 77 377 377 HOH HOH A . B 2 HOH 78 378 378 HOH HOH A . B 2 HOH 79 379 379 HOH HOH A . B 2 HOH 80 380 380 HOH HOH A . B 2 HOH 81 381 381 HOH HOH A . B 2 HOH 82 382 382 HOH HOH A . B 2 HOH 83 383 383 HOH HOH A . B 2 HOH 84 384 384 HOH HOH A . B 2 HOH 85 385 385 HOH HOH A . #