data_3RMI # _entry.id 3RMI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3RMI pdb_00003rmi 10.2210/pdb3rmi/pdb RCSB RCSB065114 ? ? WWPDB D_1000065114 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id BaheA.00146.a _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3RMI _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-04-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Chorismate mutase from Bartonella henselae str. Houston-1 in complex with malate' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gardberg, A.' 1 ? primary 'Edwards, T.' 2 ? primary 'Staker, B.' 3 ? primary 'Stewart, L.' 4 ? # _cell.entry_id 3RMI _cell.length_a 71.320 _cell.length_b 71.320 _cell.length_c 145.840 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RMI _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.Int_Tables_number 180 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chorismate mutase protein' 13456.607 1 5.4.99.5 ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn D-MALATE 134.087 1 ? ? ? ? 5 water nat water 18.015 23 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGSMMQEKILSELAYLRQSIDNFDITLIHILAERFRCTQAIGRLKARYNLPAVDPLREQYQIKRLRKLAIDTHFDPDFA EKFLKFIIKEVVHQHEVIAEKQKIKKENLNESQN ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGSMMQEKILSELAYLRQSIDNFDITLIHILAERFRCTQAIGRLKARYNLPAVDPLREQYQIKRLRKLAIDTHFDPDFA EKFLKFIIKEVVHQHEVIAEKQKIKKENLNESQN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier BaheA.00146.a # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 SER n 1 5 MET n 1 6 MET n 1 7 GLN n 1 8 GLU n 1 9 LYS n 1 10 ILE n 1 11 LEU n 1 12 SER n 1 13 GLU n 1 14 LEU n 1 15 ALA n 1 16 TYR n 1 17 LEU n 1 18 ARG n 1 19 GLN n 1 20 SER n 1 21 ILE n 1 22 ASP n 1 23 ASN n 1 24 PHE n 1 25 ASP n 1 26 ILE n 1 27 THR n 1 28 LEU n 1 29 ILE n 1 30 HIS n 1 31 ILE n 1 32 LEU n 1 33 ALA n 1 34 GLU n 1 35 ARG n 1 36 PHE n 1 37 ARG n 1 38 CYS n 1 39 THR n 1 40 GLN n 1 41 ALA n 1 42 ILE n 1 43 GLY n 1 44 ARG n 1 45 LEU n 1 46 LYS n 1 47 ALA n 1 48 ARG n 1 49 TYR n 1 50 ASN n 1 51 LEU n 1 52 PRO n 1 53 ALA n 1 54 VAL n 1 55 ASP n 1 56 PRO n 1 57 LEU n 1 58 ARG n 1 59 GLU n 1 60 GLN n 1 61 TYR n 1 62 GLN n 1 63 ILE n 1 64 LYS n 1 65 ARG n 1 66 LEU n 1 67 ARG n 1 68 LYS n 1 69 LEU n 1 70 ALA n 1 71 ILE n 1 72 ASP n 1 73 THR n 1 74 HIS n 1 75 PHE n 1 76 ASP n 1 77 PRO n 1 78 ASP n 1 79 PHE n 1 80 ALA n 1 81 GLU n 1 82 LYS n 1 83 PHE n 1 84 LEU n 1 85 LYS n 1 86 PHE n 1 87 ILE n 1 88 ILE n 1 89 LYS n 1 90 GLU n 1 91 VAL n 1 92 VAL n 1 93 HIS n 1 94 GLN n 1 95 HIS n 1 96 GLU n 1 97 VAL n 1 98 ILE n 1 99 ALA n 1 100 GLU n 1 101 LYS n 1 102 GLN n 1 103 LYS n 1 104 ILE n 1 105 LYS n 1 106 LYS n 1 107 GLU n 1 108 ASN n 1 109 LEU n 1 110 ASN n 1 111 GLU n 1 112 SER n 1 113 GLN n 1 114 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'tyrA, BH16030' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Houston-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bartonella henselae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 283166 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name AVA0421 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6G5B4_BARHE _struct_ref.pdbx_db_accession Q6G5B4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MMQEKILSELAYLRQSIDNFDITLIHILAERFRCTQAIGRLKARYNLPAVDPLREQYQIKRLRKLAIDTHFDPDFAEKFL KFIIKEVVHQHEVIAEKQKIKKENLNESQN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RMI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 114 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6G5B4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 110 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 110 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RMI GLY A 1 ? UNP Q6G5B4 ? ? 'expression tag' -3 1 1 3RMI PRO A 2 ? UNP Q6G5B4 ? ? 'expression tag' -2 2 1 3RMI GLY A 3 ? UNP Q6G5B4 ? ? 'expression tag' -1 3 1 3RMI SER A 4 ? UNP Q6G5B4 ? ? 'expression tag' 0 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLT non-polymer . D-MALATE '(2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID' 'C4 H6 O5' 134.087 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3RMI _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 43.2 _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 290 _exptl_crystal_grow.pdbx_details ;Internal tracking number 218208F3. INDEX screen condition F3: 5% v/v Tacsimate pH 7.0, 0.1 M HEPES pH 7.0, 10% PEG-MME 5000. BaheA.00146.a.A1 PS00787 at 51.1 mg/ml., vapor diffusion, sitting drop, temperature 290K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-04-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9765 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.3' _diffrn_source.pdbx_wavelength_list 0.9765 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.3 # _reflns.entry_id 3RMI _reflns.d_resolution_high 2.400 _reflns.number_obs 9071 _reflns.pdbx_Rmerge_I_obs 0.047 _reflns.pdbx_netI_over_sigmaI 27.000 _reflns.percent_possible_obs 98.900 _reflns.B_iso_Wilson_estimate 53.213 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.8 _reflns.number_all 9173 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 7.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.40 2.46 5464 ? 659 0.439 5.6 ? ? 8.3 ? 663 99.40 1 ? 2.46 2.53 5070 ? 617 0.373 6.4 ? ? ? ? ? 99.00 2 ? 2.53 2.60 4993 ? 612 0.274 8.3 ? ? ? ? ? 98.90 3 ? 2.60 2.68 4980 ? 609 0.243 9.2 ? ? ? ? ? 99.50 4 ? 2.68 2.77 4801 ? 587 0.173 11.9 ? ? ? ? ? 99.00 5 ? 2.77 2.87 4617 ? 566 0.143 14.9 ? ? ? ? ? 99.30 6 ? 2.87 2.98 4440 ? 554 0.112 17.3 ? ? ? ? ? 99.60 7 ? 2.98 3.10 4295 ? 535 0.079 21.0 ? ? ? ? ? 99.60 8 ? 3.10 3.24 4128 ? 515 0.071 24.2 ? ? ? ? ? 99.60 9 ? 3.24 3.39 3847 ? 483 0.053 31.0 ? ? ? ? ? 99.60 10 ? 3.39 3.58 3683 ? 475 0.045 36.4 ? ? ? ? ? 99.80 11 ? 3.58 3.79 3386 ? 442 0.037 43.3 ? ? ? ? ? 99.80 12 ? 3.79 4.06 3217 ? 427 0.035 45.8 ? ? ? ? ? 99.50 13 ? 4.06 4.38 2950 ? 397 0.030 53.2 ? ? ? ? ? 99.20 14 ? 4.38 4.80 2684 ? 371 0.029 54.7 ? ? ? ? ? 99.50 15 ? 4.80 5.37 2397 ? 342 0.029 53.2 ? ? ? ? ? 99.70 16 ? 5.37 6.20 2079 ? 303 0.032 50.0 ? ? ? ? ? 99.00 17 ? 6.20 7.59 1839 ? 265 0.023 55.2 ? ? ? ? ? 99.60 18 ? 7.59 10.73 1384 ? 211 0.018 56.5 ? ? ? ? ? 95.90 19 ? 10.73 ? 549 ? 101 0.020 55.9 ? ? ? ? ? 71.10 20 ? # _refine.entry_id 3RMI _refine.ls_d_res_high 2.400 _refine.ls_d_res_low 19.8 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.680 _refine.ls_number_reflns_obs 9024 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.219 _refine.ls_R_factor_R_work 0.217 _refine.ls_R_factor_R_free 0.253 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 434 _refine.B_iso_mean 49.732 _refine.aniso_B[1][1] 3.230 _refine.aniso_B[2][2] 3.230 _refine.aniso_B[3][3] -4.850 _refine.aniso_B[1][2] 1.620 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.pdbx_overall_ESU_R_Free 0.198 _refine.overall_SU_ML 0.140 _refine.overall_SU_B 13.249 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 9173 _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 2d8e _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 838 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 23 _refine_hist.number_atoms_total 880 _refine_hist.d_res_high 2.400 _refine_hist.d_res_low 19.8 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 869 0.016 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 593 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1170 1.480 1.974 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 1440 0.902 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 104 4.911 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 42 35.045 23.571 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 150 16.736 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7 10.471 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 133 0.075 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 952 0.006 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 179 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 525 0.610 1.500 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 208 0.114 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 841 1.259 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 344 2.104 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 329 3.508 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.620 _refine_ls_shell.number_reflns_R_work 605 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.305 _refine_ls_shell.R_factor_R_free 0.363 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 641 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3RMI _struct.title 'Crystal structure of Chorismate mutase from Bartonella henselae str. Houston-1 in complex with malate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RMI _struct_keywords.text 'Emerald BioStructures, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, ISOMERASE' _struct_keywords.pdbx_keywords ISOMERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 3 ? TYR A 49 ? GLY A -1 TYR A 45 1 ? 47 HELX_P HELX_P2 2 ASP A 55 ? THR A 73 ? ASP A 51 THR A 69 1 ? 19 HELX_P HELX_P3 3 ASP A 76 ? GLU A 107 ? ASP A 72 GLU A 103 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 111 ? 4 'BINDING SITE FOR RESIDUE EDO A 111' AC2 Software A GOL 112 ? 2 'BINDING SITE FOR RESIDUE GOL A 112' AC3 Software A MLT 113 ? 8 'BINDING SITE FOR RESIDUE MLT A 113' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 PHE A 36 ? PHE A 32 . ? 7_554 ? 2 AC1 4 PHE A 75 ? PHE A 71 . ? 1_555 ? 3 AC1 4 ASP A 76 ? ASP A 72 . ? 1_555 ? 4 AC1 4 GLN A 94 ? GLN A 90 . ? 7_554 ? 5 AC2 2 GLN A 7 ? GLN A 3 . ? 1_555 ? 6 AC2 2 ASP A 55 ? ASP A 51 . ? 5_554 ? 7 AC3 8 ARG A 18 ? ARG A 14 . ? 1_555 ? 8 AC3 8 ARG A 35 ? ARG A 31 . ? 7_554 ? 9 AC3 8 ILE A 42 ? ILE A 38 . ? 7_554 ? 10 AC3 8 LYS A 46 ? LYS A 42 . ? 7_554 ? 11 AC3 8 ARG A 58 ? ARG A 54 . ? 7_554 ? 12 AC3 8 GLN A 62 ? GLN A 58 . ? 7_554 ? 13 AC3 8 VAL A 91 ? VAL A 87 . ? 7_554 ? 14 AC3 8 HIS A 95 ? HIS A 91 . ? 7_554 ? # _atom_sites.entry_id 3RMI _atom_sites.fract_transf_matrix[1][1] 0.014021 _atom_sites.fract_transf_matrix[1][2] 0.008095 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016190 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006857 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 PRO 2 -2 ? ? ? A . n A 1 3 GLY 3 -1 -1 GLY GLY A . n A 1 4 SER 4 0 0 SER SER A . n A 1 5 MET 5 1 1 MET MET A . n A 1 6 MET 6 2 2 MET MET A . n A 1 7 GLN 7 3 3 GLN GLN A . n A 1 8 GLU 8 4 4 GLU GLU A . n A 1 9 LYS 9 5 5 LYS LYS A . n A 1 10 ILE 10 6 6 ILE ILE A . n A 1 11 LEU 11 7 7 LEU LEU A . n A 1 12 SER 12 8 8 SER SER A . n A 1 13 GLU 13 9 9 GLU GLU A . n A 1 14 LEU 14 10 10 LEU LEU A . n A 1 15 ALA 15 11 11 ALA ALA A . n A 1 16 TYR 16 12 12 TYR TYR A . n A 1 17 LEU 17 13 13 LEU LEU A . n A 1 18 ARG 18 14 14 ARG ARG A . n A 1 19 GLN 19 15 15 GLN GLN A . n A 1 20 SER 20 16 16 SER SER A . n A 1 21 ILE 21 17 17 ILE ILE A . n A 1 22 ASP 22 18 18 ASP ASP A . n A 1 23 ASN 23 19 19 ASN ASN A . n A 1 24 PHE 24 20 20 PHE PHE A . n A 1 25 ASP 25 21 21 ASP ASP A . n A 1 26 ILE 26 22 22 ILE ILE A . n A 1 27 THR 27 23 23 THR THR A . n A 1 28 LEU 28 24 24 LEU LEU A . n A 1 29 ILE 29 25 25 ILE ILE A . n A 1 30 HIS 30 26 26 HIS HIS A . n A 1 31 ILE 31 27 27 ILE ILE A . n A 1 32 LEU 32 28 28 LEU LEU A . n A 1 33 ALA 33 29 29 ALA ALA A . n A 1 34 GLU 34 30 30 GLU GLU A . n A 1 35 ARG 35 31 31 ARG ARG A . n A 1 36 PHE 36 32 32 PHE PHE A . n A 1 37 ARG 37 33 33 ARG ARG A . n A 1 38 CYS 38 34 34 CYS CYS A . n A 1 39 THR 39 35 35 THR THR A . n A 1 40 GLN 40 36 36 GLN GLN A . n A 1 41 ALA 41 37 37 ALA ALA A . n A 1 42 ILE 42 38 38 ILE ILE A . n A 1 43 GLY 43 39 39 GLY GLY A . n A 1 44 ARG 44 40 40 ARG ARG A . n A 1 45 LEU 45 41 41 LEU LEU A . n A 1 46 LYS 46 42 42 LYS LYS A . n A 1 47 ALA 47 43 43 ALA ALA A . n A 1 48 ARG 48 44 44 ARG ARG A . n A 1 49 TYR 49 45 45 TYR TYR A . n A 1 50 ASN 50 46 46 ASN ASN A . n A 1 51 LEU 51 47 47 LEU LEU A . n A 1 52 PRO 52 48 48 PRO PRO A . n A 1 53 ALA 53 49 49 ALA ALA A . n A 1 54 VAL 54 50 50 VAL VAL A . n A 1 55 ASP 55 51 51 ASP ASP A . n A 1 56 PRO 56 52 52 PRO PRO A . n A 1 57 LEU 57 53 53 LEU LEU A . n A 1 58 ARG 58 54 54 ARG ARG A . n A 1 59 GLU 59 55 55 GLU GLU A . n A 1 60 GLN 60 56 56 GLN GLN A . n A 1 61 TYR 61 57 57 TYR TYR A . n A 1 62 GLN 62 58 58 GLN GLN A . n A 1 63 ILE 63 59 59 ILE ILE A . n A 1 64 LYS 64 60 60 LYS LYS A . n A 1 65 ARG 65 61 61 ARG ARG A . n A 1 66 LEU 66 62 62 LEU LEU A . n A 1 67 ARG 67 63 63 ARG ARG A . n A 1 68 LYS 68 64 64 LYS LYS A . n A 1 69 LEU 69 65 65 LEU LEU A . n A 1 70 ALA 70 66 66 ALA ALA A . n A 1 71 ILE 71 67 67 ILE ILE A . n A 1 72 ASP 72 68 68 ASP ASP A . n A 1 73 THR 73 69 69 THR THR A . n A 1 74 HIS 74 70 70 HIS HIS A . n A 1 75 PHE 75 71 71 PHE PHE A . n A 1 76 ASP 76 72 72 ASP ASP A . n A 1 77 PRO 77 73 73 PRO PRO A . n A 1 78 ASP 78 74 74 ASP ASP A . n A 1 79 PHE 79 75 75 PHE PHE A . n A 1 80 ALA 80 76 76 ALA ALA A . n A 1 81 GLU 81 77 77 GLU GLU A . n A 1 82 LYS 82 78 78 LYS LYS A . n A 1 83 PHE 83 79 79 PHE PHE A . n A 1 84 LEU 84 80 80 LEU LEU A . n A 1 85 LYS 85 81 81 LYS LYS A . n A 1 86 PHE 86 82 82 PHE PHE A . n A 1 87 ILE 87 83 83 ILE ILE A . n A 1 88 ILE 88 84 84 ILE ILE A . n A 1 89 LYS 89 85 85 LYS LYS A . n A 1 90 GLU 90 86 86 GLU GLU A . n A 1 91 VAL 91 87 87 VAL VAL A . n A 1 92 VAL 92 88 88 VAL VAL A . n A 1 93 HIS 93 89 89 HIS HIS A . n A 1 94 GLN 94 90 90 GLN GLN A . n A 1 95 HIS 95 91 91 HIS HIS A . n A 1 96 GLU 96 92 92 GLU GLU A . n A 1 97 VAL 97 93 93 VAL VAL A . n A 1 98 ILE 98 94 94 ILE ILE A . n A 1 99 ALA 99 95 95 ALA ALA A . n A 1 100 GLU 100 96 96 GLU GLU A . n A 1 101 LYS 101 97 97 LYS LYS A . n A 1 102 GLN 102 98 98 GLN GLN A . n A 1 103 LYS 103 99 99 LYS LYS A . n A 1 104 ILE 104 100 100 ILE ILE A . n A 1 105 LYS 105 101 101 LYS LYS A . n A 1 106 LYS 106 102 102 LYS LYS A . n A 1 107 GLU 107 103 103 GLU GLU A . n A 1 108 ASN 108 104 ? ? ? A . n A 1 109 LEU 109 105 ? ? ? A . n A 1 110 ASN 110 106 ? ? ? A . n A 1 111 GLU 111 107 ? ? ? A . n A 1 112 SER 112 108 ? ? ? A . n A 1 113 GLN 113 109 ? ? ? A . n A 1 114 ASN 114 110 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 111 1 EDO EDO A . C 3 GOL 1 112 1 GOL GOL A . D 4 MLT 1 113 1 MLT MLT A . E 5 HOH 1 114 1 HOH HOH A . E 5 HOH 2 115 2 HOH HOH A . E 5 HOH 3 116 3 HOH HOH A . E 5 HOH 4 117 4 HOH HOH A . E 5 HOH 5 118 5 HOH HOH A . E 5 HOH 6 119 6 HOH HOH A . E 5 HOH 7 120 7 HOH HOH A . E 5 HOH 8 121 8 HOH HOH A . E 5 HOH 9 122 9 HOH HOH A . E 5 HOH 10 123 10 HOH HOH A . E 5 HOH 11 124 11 HOH HOH A . E 5 HOH 12 125 12 HOH HOH A . E 5 HOH 13 126 13 HOH HOH A . E 5 HOH 14 127 14 HOH HOH A . E 5 HOH 15 128 15 HOH HOH A . E 5 HOH 16 129 16 HOH HOH A . E 5 HOH 17 130 17 HOH HOH A . E 5 HOH 18 131 18 HOH HOH A . E 5 HOH 19 132 19 HOH HOH A . E 5 HOH 20 133 20 HOH HOH A . E 5 HOH 21 134 21 HOH HOH A . E 5 HOH 22 135 22 HOH HOH A . E 5 HOH 23 136 23 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6460 ? 1 MORE -38 ? 1 'SSA (A^2)' 11860 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_554 y,x,-z-1/3 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -48.6133333333 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 22.7913 22.4410 -44.7848 0.4680 0.2344 0.1956 0.1847 0.0763 -0.0211 3.7023 1.8637 23.9269 -0.3067 -5.0296 5.8501 -0.1705 0.1853 -0.0148 0.2314 -0.0338 -0.0589 -0.5971 -0.0805 1.0095 'X-RAY DIFFRACTION' 2 ? refined 14.9509 22.7511 -11.3965 0.0915 0.2570 0.1281 0.0749 0.0040 0.0180 2.9716 1.1731 9.0261 -0.0478 -2.2571 -0.4750 -0.1396 -0.0730 0.2126 -0.6465 -0.1845 -0.0540 0.1850 0.0972 0.4103 'X-RAY DIFFRACTION' 3 ? refined 4.4389 20.6628 -15.6844 0.0618 0.2217 0.1716 -0.0185 0.0556 -0.0061 3.5389 2.3418 8.9521 -0.2836 0.0216 -0.5230 -0.0500 -0.0426 0.0927 -0.1540 -0.1874 0.2055 0.0717 0.6474 -0.5867 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 . . . . ? A -1 A 20 'X-RAY DIFFRACTION' ? 2 2 . . . . ? A 21 A 46 'X-RAY DIFFRACTION' ? 3 3 . . . . ? A 47 A 103 'X-RAY DIFFRACTION' ? # _pdbx_phasing_MR.entry_id 3RMI _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 19.810 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 19.810 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 1 PHASER . ? other 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 2 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 61 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 61 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 61 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.98 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.32 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A MET 1 ? CG ? A MET 5 CG 2 1 Y 1 A MET 1 ? SD ? A MET 5 SD 3 1 Y 1 A MET 1 ? CE ? A MET 5 CE 4 1 Y 1 A LYS 5 ? CG ? A LYS 9 CG 5 1 Y 1 A LYS 5 ? CD ? A LYS 9 CD 6 1 Y 1 A LYS 5 ? CE ? A LYS 9 CE 7 1 Y 1 A LYS 5 ? NZ ? A LYS 9 NZ 8 1 Y 1 A ARG 44 ? CG ? A ARG 48 CG 9 1 Y 1 A ARG 44 ? CD ? A ARG 48 CD 10 1 Y 1 A ARG 44 ? NE ? A ARG 48 NE 11 1 Y 1 A ARG 44 ? CZ ? A ARG 48 CZ 12 1 Y 1 A ARG 44 ? NH1 ? A ARG 48 NH1 13 1 Y 1 A ARG 44 ? NH2 ? A ARG 48 NH2 14 1 Y 1 A LYS 60 ? CG ? A LYS 64 CG 15 1 Y 1 A LYS 60 ? CD ? A LYS 64 CD 16 1 Y 1 A LYS 60 ? CE ? A LYS 64 CE 17 1 Y 1 A LYS 60 ? NZ ? A LYS 64 NZ 18 1 Y 1 A LYS 64 ? CG ? A LYS 68 CG 19 1 Y 1 A LYS 64 ? CD ? A LYS 68 CD 20 1 Y 1 A LYS 64 ? CE ? A LYS 68 CE 21 1 Y 1 A LYS 64 ? NZ ? A LYS 68 NZ 22 1 Y 1 A LYS 97 ? CG ? A LYS 101 CG 23 1 Y 1 A LYS 97 ? CD ? A LYS 101 CD 24 1 Y 1 A LYS 97 ? CE ? A LYS 101 CE 25 1 Y 1 A LYS 97 ? NZ ? A LYS 101 NZ 26 1 Y 1 A GLN 98 ? CG ? A GLN 102 CG 27 1 Y 1 A GLN 98 ? CD ? A GLN 102 CD 28 1 Y 1 A GLN 98 ? OE1 ? A GLN 102 OE1 29 1 Y 1 A GLN 98 ? NE2 ? A GLN 102 NE2 30 1 Y 1 A LYS 101 ? CG ? A LYS 105 CG 31 1 Y 1 A LYS 101 ? CD ? A LYS 105 CD 32 1 Y 1 A LYS 101 ? CE ? A LYS 105 CE 33 1 Y 1 A LYS 101 ? NZ ? A LYS 105 NZ 34 1 Y 1 A LYS 102 ? CG ? A LYS 106 CG 35 1 Y 1 A LYS 102 ? CD ? A LYS 106 CD 36 1 Y 1 A LYS 102 ? CE ? A LYS 106 CE 37 1 Y 1 A LYS 102 ? NZ ? A LYS 106 NZ 38 1 Y 1 A GLU 103 ? CG ? A GLU 107 CG 39 1 Y 1 A GLU 103 ? CD ? A GLU 107 CD 40 1 Y 1 A GLU 103 ? OE1 ? A GLU 107 OE1 41 1 Y 1 A GLU 103 ? OE2 ? A GLU 107 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A PRO -2 ? A PRO 2 3 1 Y 1 A ASN 104 ? A ASN 108 4 1 Y 1 A LEU 105 ? A LEU 109 5 1 Y 1 A ASN 106 ? A ASN 110 6 1 Y 1 A GLU 107 ? A GLU 111 7 1 Y 1 A SER 108 ? A SER 112 8 1 Y 1 A GLN 109 ? A GLN 113 9 1 Y 1 A ASN 110 ? A ASN 114 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 GOL C1 C N N 147 GOL O1 O N N 148 GOL C2 C N N 149 GOL O2 O N N 150 GOL C3 C N N 151 GOL O3 O N N 152 GOL H11 H N N 153 GOL H12 H N N 154 GOL HO1 H N N 155 GOL H2 H N N 156 GOL HO2 H N N 157 GOL H31 H N N 158 GOL H32 H N N 159 GOL HO3 H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 MLT C1 C N N 274 MLT O1 O N N 275 MLT O2 O N N 276 MLT C2 C N R 277 MLT O3 O N N 278 MLT C3 C N N 279 MLT C4 C N N 280 MLT O4 O N N 281 MLT O5 O N N 282 MLT H2 H N N 283 MLT HO3 H N N 284 MLT H31 H N N 285 MLT H32 H N N 286 MLT HO5 H N N 287 MLT H6 H N N 288 PHE N N N N 289 PHE CA C N S 290 PHE C C N N 291 PHE O O N N 292 PHE CB C N N 293 PHE CG C Y N 294 PHE CD1 C Y N 295 PHE CD2 C Y N 296 PHE CE1 C Y N 297 PHE CE2 C Y N 298 PHE CZ C Y N 299 PHE OXT O N N 300 PHE H H N N 301 PHE H2 H N N 302 PHE HA H N N 303 PHE HB2 H N N 304 PHE HB3 H N N 305 PHE HD1 H N N 306 PHE HD2 H N N 307 PHE HE1 H N N 308 PHE HE2 H N N 309 PHE HZ H N N 310 PHE HXT H N N 311 PRO N N N N 312 PRO CA C N S 313 PRO C C N N 314 PRO O O N N 315 PRO CB C N N 316 PRO CG C N N 317 PRO CD C N N 318 PRO OXT O N N 319 PRO H H N N 320 PRO HA H N N 321 PRO HB2 H N N 322 PRO HB3 H N N 323 PRO HG2 H N N 324 PRO HG3 H N N 325 PRO HD2 H N N 326 PRO HD3 H N N 327 PRO HXT H N N 328 SER N N N N 329 SER CA C N S 330 SER C C N N 331 SER O O N N 332 SER CB C N N 333 SER OG O N N 334 SER OXT O N N 335 SER H H N N 336 SER H2 H N N 337 SER HA H N N 338 SER HB2 H N N 339 SER HB3 H N N 340 SER HG H N N 341 SER HXT H N N 342 THR N N N N 343 THR CA C N S 344 THR C C N N 345 THR O O N N 346 THR CB C N R 347 THR OG1 O N N 348 THR CG2 C N N 349 THR OXT O N N 350 THR H H N N 351 THR H2 H N N 352 THR HA H N N 353 THR HB H N N 354 THR HG1 H N N 355 THR HG21 H N N 356 THR HG22 H N N 357 THR HG23 H N N 358 THR HXT H N N 359 TYR N N N N 360 TYR CA C N S 361 TYR C C N N 362 TYR O O N N 363 TYR CB C N N 364 TYR CG C Y N 365 TYR CD1 C Y N 366 TYR CD2 C Y N 367 TYR CE1 C Y N 368 TYR CE2 C Y N 369 TYR CZ C Y N 370 TYR OH O N N 371 TYR OXT O N N 372 TYR H H N N 373 TYR H2 H N N 374 TYR HA H N N 375 TYR HB2 H N N 376 TYR HB3 H N N 377 TYR HD1 H N N 378 TYR HD2 H N N 379 TYR HE1 H N N 380 TYR HE2 H N N 381 TYR HH H N N 382 TYR HXT H N N 383 VAL N N N N 384 VAL CA C N S 385 VAL C C N N 386 VAL O O N N 387 VAL CB C N N 388 VAL CG1 C N N 389 VAL CG2 C N N 390 VAL OXT O N N 391 VAL H H N N 392 VAL H2 H N N 393 VAL HA H N N 394 VAL HB H N N 395 VAL HG11 H N N 396 VAL HG12 H N N 397 VAL HG13 H N N 398 VAL HG21 H N N 399 VAL HG22 H N N 400 VAL HG23 H N N 401 VAL HXT H N N 402 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 GOL C1 O1 sing N N 138 GOL C1 C2 sing N N 139 GOL C1 H11 sing N N 140 GOL C1 H12 sing N N 141 GOL O1 HO1 sing N N 142 GOL C2 O2 sing N N 143 GOL C2 C3 sing N N 144 GOL C2 H2 sing N N 145 GOL O2 HO2 sing N N 146 GOL C3 O3 sing N N 147 GOL C3 H31 sing N N 148 GOL C3 H32 sing N N 149 GOL O3 HO3 sing N N 150 HIS N CA sing N N 151 HIS N H sing N N 152 HIS N H2 sing N N 153 HIS CA C sing N N 154 HIS CA CB sing N N 155 HIS CA HA sing N N 156 HIS C O doub N N 157 HIS C OXT sing N N 158 HIS CB CG sing N N 159 HIS CB HB2 sing N N 160 HIS CB HB3 sing N N 161 HIS CG ND1 sing Y N 162 HIS CG CD2 doub Y N 163 HIS ND1 CE1 doub Y N 164 HIS ND1 HD1 sing N N 165 HIS CD2 NE2 sing Y N 166 HIS CD2 HD2 sing N N 167 HIS CE1 NE2 sing Y N 168 HIS CE1 HE1 sing N N 169 HIS NE2 HE2 sing N N 170 HIS OXT HXT sing N N 171 HOH O H1 sing N N 172 HOH O H2 sing N N 173 ILE N CA sing N N 174 ILE N H sing N N 175 ILE N H2 sing N N 176 ILE CA C sing N N 177 ILE CA CB sing N N 178 ILE CA HA sing N N 179 ILE C O doub N N 180 ILE C OXT sing N N 181 ILE CB CG1 sing N N 182 ILE CB CG2 sing N N 183 ILE CB HB sing N N 184 ILE CG1 CD1 sing N N 185 ILE CG1 HG12 sing N N 186 ILE CG1 HG13 sing N N 187 ILE CG2 HG21 sing N N 188 ILE CG2 HG22 sing N N 189 ILE CG2 HG23 sing N N 190 ILE CD1 HD11 sing N N 191 ILE CD1 HD12 sing N N 192 ILE CD1 HD13 sing N N 193 ILE OXT HXT sing N N 194 LEU N CA sing N N 195 LEU N H sing N N 196 LEU N H2 sing N N 197 LEU CA C sing N N 198 LEU CA CB sing N N 199 LEU CA HA sing N N 200 LEU C O doub N N 201 LEU C OXT sing N N 202 LEU CB CG sing N N 203 LEU CB HB2 sing N N 204 LEU CB HB3 sing N N 205 LEU CG CD1 sing N N 206 LEU CG CD2 sing N N 207 LEU CG HG sing N N 208 LEU CD1 HD11 sing N N 209 LEU CD1 HD12 sing N N 210 LEU CD1 HD13 sing N N 211 LEU CD2 HD21 sing N N 212 LEU CD2 HD22 sing N N 213 LEU CD2 HD23 sing N N 214 LEU OXT HXT sing N N 215 LYS N CA sing N N 216 LYS N H sing N N 217 LYS N H2 sing N N 218 LYS CA C sing N N 219 LYS CA CB sing N N 220 LYS CA HA sing N N 221 LYS C O doub N N 222 LYS C OXT sing N N 223 LYS CB CG sing N N 224 LYS CB HB2 sing N N 225 LYS CB HB3 sing N N 226 LYS CG CD sing N N 227 LYS CG HG2 sing N N 228 LYS CG HG3 sing N N 229 LYS CD CE sing N N 230 LYS CD HD2 sing N N 231 LYS CD HD3 sing N N 232 LYS CE NZ sing N N 233 LYS CE HE2 sing N N 234 LYS CE HE3 sing N N 235 LYS NZ HZ1 sing N N 236 LYS NZ HZ2 sing N N 237 LYS NZ HZ3 sing N N 238 LYS OXT HXT sing N N 239 MET N CA sing N N 240 MET N H sing N N 241 MET N H2 sing N N 242 MET CA C sing N N 243 MET CA CB sing N N 244 MET CA HA sing N N 245 MET C O doub N N 246 MET C OXT sing N N 247 MET CB CG sing N N 248 MET CB HB2 sing N N 249 MET CB HB3 sing N N 250 MET CG SD sing N N 251 MET CG HG2 sing N N 252 MET CG HG3 sing N N 253 MET SD CE sing N N 254 MET CE HE1 sing N N 255 MET CE HE2 sing N N 256 MET CE HE3 sing N N 257 MET OXT HXT sing N N 258 MLT C1 O1 doub N N 259 MLT C1 O2 sing N N 260 MLT C1 C2 sing N N 261 MLT C2 O3 sing N N 262 MLT C2 C3 sing N N 263 MLT C2 H2 sing N N 264 MLT O3 HO3 sing N N 265 MLT C3 C4 sing N N 266 MLT C3 H31 sing N N 267 MLT C3 H32 sing N N 268 MLT C4 O4 doub N N 269 MLT C4 O5 sing N N 270 MLT O5 HO5 sing N N 271 MLT O2 H6 sing N N 272 PHE N CA sing N N 273 PHE N H sing N N 274 PHE N H2 sing N N 275 PHE CA C sing N N 276 PHE CA CB sing N N 277 PHE CA HA sing N N 278 PHE C O doub N N 279 PHE C OXT sing N N 280 PHE CB CG sing N N 281 PHE CB HB2 sing N N 282 PHE CB HB3 sing N N 283 PHE CG CD1 doub Y N 284 PHE CG CD2 sing Y N 285 PHE CD1 CE1 sing Y N 286 PHE CD1 HD1 sing N N 287 PHE CD2 CE2 doub Y N 288 PHE CD2 HD2 sing N N 289 PHE CE1 CZ doub Y N 290 PHE CE1 HE1 sing N N 291 PHE CE2 CZ sing Y N 292 PHE CE2 HE2 sing N N 293 PHE CZ HZ sing N N 294 PHE OXT HXT sing N N 295 PRO N CA sing N N 296 PRO N CD sing N N 297 PRO N H sing N N 298 PRO CA C sing N N 299 PRO CA CB sing N N 300 PRO CA HA sing N N 301 PRO C O doub N N 302 PRO C OXT sing N N 303 PRO CB CG sing N N 304 PRO CB HB2 sing N N 305 PRO CB HB3 sing N N 306 PRO CG CD sing N N 307 PRO CG HG2 sing N N 308 PRO CG HG3 sing N N 309 PRO CD HD2 sing N N 310 PRO CD HD3 sing N N 311 PRO OXT HXT sing N N 312 SER N CA sing N N 313 SER N H sing N N 314 SER N H2 sing N N 315 SER CA C sing N N 316 SER CA CB sing N N 317 SER CA HA sing N N 318 SER C O doub N N 319 SER C OXT sing N N 320 SER CB OG sing N N 321 SER CB HB2 sing N N 322 SER CB HB3 sing N N 323 SER OG HG sing N N 324 SER OXT HXT sing N N 325 THR N CA sing N N 326 THR N H sing N N 327 THR N H2 sing N N 328 THR CA C sing N N 329 THR CA CB sing N N 330 THR CA HA sing N N 331 THR C O doub N N 332 THR C OXT sing N N 333 THR CB OG1 sing N N 334 THR CB CG2 sing N N 335 THR CB HB sing N N 336 THR OG1 HG1 sing N N 337 THR CG2 HG21 sing N N 338 THR CG2 HG22 sing N N 339 THR CG2 HG23 sing N N 340 THR OXT HXT sing N N 341 TYR N CA sing N N 342 TYR N H sing N N 343 TYR N H2 sing N N 344 TYR CA C sing N N 345 TYR CA CB sing N N 346 TYR CA HA sing N N 347 TYR C O doub N N 348 TYR C OXT sing N N 349 TYR CB CG sing N N 350 TYR CB HB2 sing N N 351 TYR CB HB3 sing N N 352 TYR CG CD1 doub Y N 353 TYR CG CD2 sing Y N 354 TYR CD1 CE1 sing Y N 355 TYR CD1 HD1 sing N N 356 TYR CD2 CE2 doub Y N 357 TYR CD2 HD2 sing N N 358 TYR CE1 CZ doub Y N 359 TYR CE1 HE1 sing N N 360 TYR CE2 CZ sing Y N 361 TYR CE2 HE2 sing N N 362 TYR CZ OH sing N N 363 TYR OH HH sing N N 364 TYR OXT HXT sing N N 365 VAL N CA sing N N 366 VAL N H sing N N 367 VAL N H2 sing N N 368 VAL CA C sing N N 369 VAL CA CB sing N N 370 VAL CA HA sing N N 371 VAL C O doub N N 372 VAL C OXT sing N N 373 VAL CB CG1 sing N N 374 VAL CB CG2 sing N N 375 VAL CB HB sing N N 376 VAL CG1 HG11 sing N N 377 VAL CG1 HG12 sing N N 378 VAL CG1 HG13 sing N N 379 VAL CG2 HG21 sing N N 380 VAL CG2 HG22 sing N N 381 VAL CG2 HG23 sing N N 382 VAL OXT HXT sing N N 383 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 GLYCEROL GOL 4 D-MALATE MLT 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2D8E _pdbx_initial_refinement_model.details ? #