HEADER PROTEIN BINDING 27-APR-11 3RPX TITLE CRYSTAL STRUCTURE OF COMPLEMENT COMPONENT 1, Q SUBCOMPONENT BINDING TITLE 2 PROTEIN, C1QBP COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPLEMENT COMPONENT 1 Q SUBCOMPONENT-BINDING PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 96-282; COMPND 5 SYNONYM: GC1Q-R PROTEIN, GLYCOPROTEIN GC1QBP, C1QBP, HYALURONAN- COMPND 6 BINDING PROTEIN 1, MITOCHONDRIAL MATRIX PROTEIN P32, P33; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C1QBP, GC1QBP, HABP1, SF2P32; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-V2R-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC-CH KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, MITOCHONDRION KEYWDS 2 MATRIX, COMPLEMENT SYSTEM, PROTEIN-BINDING, SGC, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR W.TEMPEL,Y.TONG,L.CROMBET,Y.SHEN,X.GUAN,L.NEDYALKOVA,J.R.WALKER, AUTHOR 2 C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,J.WEIGELT,H.PARK,STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (SGC) REVDAT 3 13-SEP-23 3RPX 1 SEQADV REVDAT 2 01-JUN-11 3RPX 1 HEADER REVDAT 1 11-MAY-11 3RPX 0 JRNL AUTH W.TEMPEL,Y.TONG,L.CROMBET,Y.SHEN,X.GUAN,L.NEDYALKOVA, JRNL AUTH 2 J.R.WALKER,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,J.WEIGELT, JRNL AUTH 3 H.PARK JRNL TITL CRYSTAL STRUCTURE OF COMPLEMENT COMPONENT 1, Q SUBCOMPONENT JRNL TITL 2 BINDING PROTEIN, C1QBP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 28824 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS (SFTOOLS) REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.270 REMARK 3 FREE R VALUE TEST SET COUNT : 1520 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 14 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.75 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2980 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2553 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2821 REMARK 3 BIN R VALUE (WORKING SET) : 0.2535 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.34 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 159 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3224 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 67.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 16.56320 REMARK 3 B22 (A**2) : -9.19600 REMARK 3 B33 (A**2) : -7.36720 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.442 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3298 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4484 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1077 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 89 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 479 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3298 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 450 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3422 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.57 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.56 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 46.8355 19.5108 15.4839 REMARK 3 T TENSOR REMARK 3 T11: -0.2887 T22: 0.3235 REMARK 3 T33: -0.1972 T12: 0.0392 REMARK 3 T13: -0.0558 T23: -0.0871 REMARK 3 L TENSOR REMARK 3 L11: 1.5333 L22: 1.8398 REMARK 3 L33: 5.6123 L12: 0.9763 REMARK 3 L13: 1.5122 L23: 2.6756 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: -0.2603 S13: 0.0880 REMARK 3 S21: 0.3209 S22: -0.1768 S23: -0.1931 REMARK 3 S31: -0.0264 S32: -0.0157 S33: 0.1608 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 12.5150 23.0784 7.6916 REMARK 3 T TENSOR REMARK 3 T11: -0.2604 T22: 0.3408 REMARK 3 T33: -0.2220 T12: 0.0291 REMARK 3 T13: -0.0216 T23: -0.1224 REMARK 3 L TENSOR REMARK 3 L11: 5.1754 L22: 1.3066 REMARK 3 L33: 0.7902 L12: -0.7444 REMARK 3 L13: 0.2425 L23: 0.0475 REMARK 3 S TENSOR REMARK 3 S11: -0.3171 S12: -0.1615 S13: 0.2546 REMARK 3 S21: 0.1093 S22: 0.1177 S23: -0.0080 REMARK 3 S31: 0.0540 S32: 0.1305 S33: 0.1994 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 28.3305 38.9529 34.8751 REMARK 3 T TENSOR REMARK 3 T11: -0.2052 T22: 0.3428 REMARK 3 T33: -0.3149 T12: 0.0551 REMARK 3 T13: -0.1689 T23: -0.3040 REMARK 3 L TENSOR REMARK 3 L11: 14.1372 L22: 0.6028 REMARK 3 L33: 1.9219 L12: -0.6699 REMARK 3 L13: 2.4290 L23: 0.7623 REMARK 3 S TENSOR REMARK 3 S11: -0.2217 S12: -1.0885 S13: 0.4004 REMARK 3 S21: 0.0440 S22: -0.1224 S23: 0.3082 REMARK 3 S31: -0.3538 S32: -0.3179 S33: 0.3441 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFMAC, PHENIX, COOT AND THE MOLPROBITY REMARK 3 SERVER WERE ALSO USED DURING REFINEMENT. UNK ATOMS WERE REFINED REMARK 3 AS WATER RATHER THAN OMITTED IN ORDER TO BETTER APPROXIMATE THE REMARK 3 PROPERTIES OF THESE UNKNOWN ENTITIES. REMARK 4 REMARK 4 3RPX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-11. REMARK 100 THE DEPOSITION ID IS D_1000065232. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28824 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.97200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1P32 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG1500, 0.2 M SODIUM CHLORIDE, REMARK 280 0.1 M HEPES, 5% GLYCEROL, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 57.84000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.88500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 68.55500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 57.84000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.88500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 68.55500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 57.84000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.88500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 68.55500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 57.84000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 61.88500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 68.55500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 96 REMARK 465 GLN A 97 REMARK 465 LYS A 98 REMARK 465 HIS A 99 REMARK 465 ASN A 137 REMARK 465 SER A 138 REMARK 465 ILE A 139 REMARK 465 PRO A 140 REMARK 465 PRO A 141 REMARK 465 THR A 142 REMARK 465 PHE A 143 REMARK 465 ASP A 144 REMARK 465 GLY A 145 REMARK 465 GLU A 146 REMARK 465 GLU A 147 REMARK 465 GLU A 148 REMARK 465 PRO A 149 REMARK 465 SER A 150 REMARK 465 GLN A 151 REMARK 465 GLY A 152 REMARK 465 GLN A 153 REMARK 465 LYS A 154 REMARK 465 VAL A 155 REMARK 465 GLU A 156 REMARK 465 GLU A 157 REMARK 465 GLN A 158 REMARK 465 GLU A 159 REMARK 465 PRO A 160 REMARK 465 GLU A 161 REMARK 465 LEU A 162 REMARK 465 ASP A 191 REMARK 465 GLU A 192 REMARK 465 VAL A 193 REMARK 465 GLY A 194 REMARK 465 GLN A 195 REMARK 465 GLU A 196 REMARK 465 ASP A 197 REMARK 465 GLU A 198 REMARK 465 ALA A 199 REMARK 465 GLU A 200 REMARK 465 GLY A 215 REMARK 465 GLU A 216 REMARK 465 SER A 217 REMARK 465 GLU A 218 REMARK 465 TRP A 219 REMARK 465 HIS A 289 REMARK 465 ILE B 96 REMARK 465 GLN B 97 REMARK 465 LYS B 98 REMARK 465 HIS B 99 REMARK 465 SER B 138 REMARK 465 ILE B 139 REMARK 465 PRO B 140 REMARK 465 PRO B 141 REMARK 465 THR B 142 REMARK 465 PHE B 143 REMARK 465 ASP B 144 REMARK 465 GLY B 145 REMARK 465 GLU B 146 REMARK 465 GLU B 147 REMARK 465 GLU B 148 REMARK 465 PRO B 149 REMARK 465 SER B 150 REMARK 465 GLN B 151 REMARK 465 GLY B 152 REMARK 465 GLN B 153 REMARK 465 LYS B 154 REMARK 465 VAL B 155 REMARK 465 GLU B 156 REMARK 465 GLU B 157 REMARK 465 GLN B 158 REMARK 465 GLU B 159 REMARK 465 PRO B 160 REMARK 465 GLU B 161 REMARK 465 LEU B 162 REMARK 465 THR B 163 REMARK 465 GLU B 192 REMARK 465 VAL B 193 REMARK 465 GLY B 194 REMARK 465 GLN B 195 REMARK 465 GLU B 196 REMARK 465 ASP B 197 REMARK 465 GLU B 198 REMARK 465 ALA B 199 REMARK 465 GLU B 200 REMARK 465 GLY B 215 REMARK 465 GLU B 216 REMARK 465 SER B 217 REMARK 465 GLU B 218 REMARK 465 TRP B 219 REMARK 465 LYS B 220 REMARK 465 GLN B 282 REMARK 465 ALA B 283 REMARK 465 HIS B 284 REMARK 465 HIS B 285 REMARK 465 HIS B 286 REMARK 465 HIS B 287 REMARK 465 HIS B 288 REMARK 465 HIS B 289 REMARK 465 ILE C 96 REMARK 465 GLN C 97 REMARK 465 LYS C 98 REMARK 465 HIS C 99 REMARK 465 LYS C 100 REMARK 465 SER C 138 REMARK 465 ILE C 139 REMARK 465 PRO C 140 REMARK 465 PRO C 141 REMARK 465 THR C 142 REMARK 465 PHE C 143 REMARK 465 ASP C 144 REMARK 465 GLY C 145 REMARK 465 GLU C 146 REMARK 465 GLU C 147 REMARK 465 GLU C 148 REMARK 465 PRO C 149 REMARK 465 SER C 150 REMARK 465 GLN C 151 REMARK 465 GLY C 152 REMARK 465 GLN C 153 REMARK 465 LYS C 154 REMARK 465 VAL C 155 REMARK 465 GLU C 156 REMARK 465 GLU C 157 REMARK 465 GLN C 158 REMARK 465 GLU C 159 REMARK 465 PRO C 160 REMARK 465 GLU C 161 REMARK 465 LEU C 162 REMARK 465 THR C 163 REMARK 465 SER C 164 REMARK 465 ASP C 177 REMARK 465 GLY C 178 REMARK 465 GLU C 190 REMARK 465 ASP C 191 REMARK 465 GLU C 192 REMARK 465 VAL C 193 REMARK 465 GLY C 194 REMARK 465 GLN C 195 REMARK 465 GLU C 196 REMARK 465 ASP C 197 REMARK 465 GLU C 198 REMARK 465 ALA C 199 REMARK 465 GLU C 200 REMARK 465 SER C 201 REMARK 465 GLY C 215 REMARK 465 GLU C 216 REMARK 465 SER C 217 REMARK 465 GLU C 218 REMARK 465 TRP C 219 REMARK 465 LYS C 220 REMARK 465 ASP C 221 REMARK 465 GLN C 282 REMARK 465 ALA C 283 REMARK 465 HIS C 284 REMARK 465 HIS C 285 REMARK 465 HIS C 286 REMARK 465 HIS C 287 REMARK 465 HIS C 288 REMARK 465 HIS C 289 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 THR A 101 OG1 CG2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 ILE A 135 CG1 CG2 CD1 REMARK 470 THR A 163 OG1 CG2 REMARK 470 ASN A 175 CG OD1 ND2 REMARK 470 ASP A 176 CG OD1 OD2 REMARK 470 ASP A 177 CG OD1 OD2 REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 SER A 201 OG REMARK 470 ILE A 203 CG1 CG2 CD1 REMARK 470 GLN A 212 CD OE1 NE2 REMARK 470 SER A 213 OG REMARK 470 LYS A 220 CG CD CE NZ REMARK 470 ASP A 221 CG OD1 OD2 REMARK 470 THR A 222 OG1 CG2 REMARK 470 LYS A 280 CD CE NZ REMARK 470 LYS B 100 CG CD CE NZ REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 ILE B 135 CG1 CG2 CD1 REMARK 470 ASN B 137 CG OD1 ND2 REMARK 470 ASN B 175 CG OD1 ND2 REMARK 470 ASP B 176 CG OD1 OD2 REMARK 470 LYS B 179 CG CD CE NZ REMARK 470 LYS B 180 CG CD CE NZ REMARK 470 ASP B 191 CG OD1 OD2 REMARK 470 SER B 201 OG REMARK 470 GLN B 212 CD OE1 NE2 REMARK 470 ASP B 221 CG OD1 OD2 REMARK 470 LYS B 280 NZ REMARK 470 SER B 281 OG REMARK 470 THR C 101 OG1 CG2 REMARK 470 LEU C 102 CG CD1 CD2 REMARK 470 LYS C 104 CG CD CE NZ REMARK 470 GLU C 110 OE1 OE2 REMARK 470 LYS C 119 CD CE NZ REMARK 470 LYS C 123 CG CD CE NZ REMARK 470 VAL C 124 CG1 CG2 REMARK 470 LYS C 128 CG CD CE NZ REMARK 470 ILE C 129 CG1 CD1 REMARK 470 ILE C 135 CG1 CG2 CD1 REMARK 470 THR C 165 OG1 CG2 REMARK 470 ASN C 175 CG OD1 ND2 REMARK 470 ASP C 176 CG OD1 OD2 REMARK 470 LYS C 179 CG CD CE NZ REMARK 470 ASP C 202 CG OD1 OD2 REMARK 470 GLN C 212 CD OE1 NE2 REMARK 470 SER C 213 OG REMARK 470 THR C 214 OG1 CG2 REMARK 470 TRP C 233 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 233 CZ3 CH2 REMARK 470 ILE C 269 CG1 CG2 CD1 REMARK 470 LYS C 276 NZ REMARK 470 LYS C 280 CG CD CE NZ REMARK 470 SER C 281 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 249 -169.75 -123.58 REMARK 500 ASP B 249 -168.46 -125.15 REMARK 500 ASP C 249 -169.38 -124.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE ORIGINAL EXPRESSION CONSTRUCT ENCOMPASSED RESIDUES 3-282 OF REMARK 999 UNIPROT SEQUENCE Q07021. WE SUSPECT THAT DUE TO INTRAMOLECULAR DNA REMARK 999 INTERACTIONS ONLY A SHORTENED SEGMENT WAS AMPLIFIED, POSSIBLY REMARK 999 ENCODING THE REPORTED AMINO ACID SEQUENCE DBREF 3RPX A 96 282 UNP Q07021 C1QBP_HUMAN 96 282 DBREF 3RPX B 96 282 UNP Q07021 C1QBP_HUMAN 96 282 DBREF 3RPX C 96 282 UNP Q07021 C1QBP_HUMAN 96 282 SEQADV 3RPX ALA A 283 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS A 284 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS A 285 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS A 286 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS A 287 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS A 288 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS A 289 UNP Q07021 EXPRESSION TAG SEQADV 3RPX ALA B 283 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS B 284 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS B 285 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS B 286 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS B 287 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS B 288 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS B 289 UNP Q07021 EXPRESSION TAG SEQADV 3RPX ALA C 283 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS C 284 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS C 285 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS C 286 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS C 287 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS C 288 UNP Q07021 EXPRESSION TAG SEQADV 3RPX HIS C 289 UNP Q07021 EXPRESSION TAG SEQRES 1 A 194 ILE GLN LYS HIS LYS THR LEU PRO LYS MET SER GLY GLY SEQRES 2 A 194 TRP GLU LEU GLU LEU ASN GLY THR GLU ALA LYS LEU VAL SEQRES 3 A 194 ARG LYS VAL ALA GLY GLU LYS ILE THR VAL THR PHE ASN SEQRES 4 A 194 ILE ASN ASN SER ILE PRO PRO THR PHE ASP GLY GLU GLU SEQRES 5 A 194 GLU PRO SER GLN GLY GLN LYS VAL GLU GLU GLN GLU PRO SEQRES 6 A 194 GLU LEU THR SER THR PRO ASN PHE VAL VAL GLU VAL ILE SEQRES 7 A 194 LYS ASN ASP ASP GLY LYS LYS ALA LEU VAL LEU ASP CYS SEQRES 8 A 194 HIS TYR PRO GLU ASP GLU VAL GLY GLN GLU ASP GLU ALA SEQRES 9 A 194 GLU SER ASP ILE PHE SER ILE ARG GLU VAL SER PHE GLN SEQRES 10 A 194 SER THR GLY GLU SER GLU TRP LYS ASP THR ASN TYR THR SEQRES 11 A 194 LEU ASN THR ASP SER LEU ASP TRP ALA LEU TYR ASP HIS SEQRES 12 A 194 LEU MET ASP PHE LEU ALA ASP ARG GLY VAL ASP ASN THR SEQRES 13 A 194 PHE ALA ASP GLU LEU VAL GLU LEU SER THR ALA LEU GLU SEQRES 14 A 194 HIS GLN GLU TYR ILE THR PHE LEU GLU ASP LEU LYS SER SEQRES 15 A 194 PHE VAL LYS SER GLN ALA HIS HIS HIS HIS HIS HIS SEQRES 1 B 194 ILE GLN LYS HIS LYS THR LEU PRO LYS MET SER GLY GLY SEQRES 2 B 194 TRP GLU LEU GLU LEU ASN GLY THR GLU ALA LYS LEU VAL SEQRES 3 B 194 ARG LYS VAL ALA GLY GLU LYS ILE THR VAL THR PHE ASN SEQRES 4 B 194 ILE ASN ASN SER ILE PRO PRO THR PHE ASP GLY GLU GLU SEQRES 5 B 194 GLU PRO SER GLN GLY GLN LYS VAL GLU GLU GLN GLU PRO SEQRES 6 B 194 GLU LEU THR SER THR PRO ASN PHE VAL VAL GLU VAL ILE SEQRES 7 B 194 LYS ASN ASP ASP GLY LYS LYS ALA LEU VAL LEU ASP CYS SEQRES 8 B 194 HIS TYR PRO GLU ASP GLU VAL GLY GLN GLU ASP GLU ALA SEQRES 9 B 194 GLU SER ASP ILE PHE SER ILE ARG GLU VAL SER PHE GLN SEQRES 10 B 194 SER THR GLY GLU SER GLU TRP LYS ASP THR ASN TYR THR SEQRES 11 B 194 LEU ASN THR ASP SER LEU ASP TRP ALA LEU TYR ASP HIS SEQRES 12 B 194 LEU MET ASP PHE LEU ALA ASP ARG GLY VAL ASP ASN THR SEQRES 13 B 194 PHE ALA ASP GLU LEU VAL GLU LEU SER THR ALA LEU GLU SEQRES 14 B 194 HIS GLN GLU TYR ILE THR PHE LEU GLU ASP LEU LYS SER SEQRES 15 B 194 PHE VAL LYS SER GLN ALA HIS HIS HIS HIS HIS HIS SEQRES 1 C 194 ILE GLN LYS HIS LYS THR LEU PRO LYS MET SER GLY GLY SEQRES 2 C 194 TRP GLU LEU GLU LEU ASN GLY THR GLU ALA LYS LEU VAL SEQRES 3 C 194 ARG LYS VAL ALA GLY GLU LYS ILE THR VAL THR PHE ASN SEQRES 4 C 194 ILE ASN ASN SER ILE PRO PRO THR PHE ASP GLY GLU GLU SEQRES 5 C 194 GLU PRO SER GLN GLY GLN LYS VAL GLU GLU GLN GLU PRO SEQRES 6 C 194 GLU LEU THR SER THR PRO ASN PHE VAL VAL GLU VAL ILE SEQRES 7 C 194 LYS ASN ASP ASP GLY LYS LYS ALA LEU VAL LEU ASP CYS SEQRES 8 C 194 HIS TYR PRO GLU ASP GLU VAL GLY GLN GLU ASP GLU ALA SEQRES 9 C 194 GLU SER ASP ILE PHE SER ILE ARG GLU VAL SER PHE GLN SEQRES 10 C 194 SER THR GLY GLU SER GLU TRP LYS ASP THR ASN TYR THR SEQRES 11 C 194 LEU ASN THR ASP SER LEU ASP TRP ALA LEU TYR ASP HIS SEQRES 12 C 194 LEU MET ASP PHE LEU ALA ASP ARG GLY VAL ASP ASN THR SEQRES 13 C 194 PHE ALA ASP GLU LEU VAL GLU LEU SER THR ALA LEU GLU SEQRES 14 C 194 HIS GLN GLU TYR ILE THR PHE LEU GLU ASP LEU LYS SER SEQRES 15 C 194 PHE VAL LYS SER GLN ALA HIS HIS HIS HIS HIS HIS HET UNX A 42 1 HET UNX A 43 1 HET UNX A 46 1 HET UNX A 48 1 HET UNX A 49 1 HET UNX A 53 1 HET UNX A 55 1 HET UNX A 59 1 HET UNX A 60 1 HET UNX B 44 1 HET UNX B 45 1 HET UNX B 47 1 HET UNX B 50 1 HET UNX B 51 1 HET UNX B 52 1 HET UNX B 54 1 HET UNX B 56 1 HET UNX B 57 1 HET UNX B 58 1 HETNAM UNX UNKNOWN ATOM OR ION FORMUL 4 UNX 19(X) HELIX 1 1 ASP A 229 LEU A 231 5 3 HELIX 2 2 ASP A 232 ARG A 246 1 15 HELIX 3 3 ASP A 249 VAL A 279 1 31 HELIX 4 4 LYS A 280 ALA A 283 5 4 HELIX 5 5 ASP B 229 LEU B 231 5 3 HELIX 6 6 ASP B 232 ARG B 246 1 15 HELIX 7 7 ASP B 249 LYS B 280 1 32 HELIX 8 8 ASP C 229 LEU C 231 5 3 HELIX 9 9 ASP C 232 ARG C 246 1 15 HELIX 10 10 ASP C 249 LYS C 280 1 32 SHEET 1 A 7 GLU A 110 ASN A 114 0 SHEET 2 A 7 GLU A 117 VAL A 124 -1 O VAL A 121 N GLU A 110 SHEET 3 A 7 GLU A 127 ASN A 134 -1 O GLU A 127 N VAL A 124 SHEET 4 A 7 PHE A 168 ILE A 173 -1 O ILE A 173 N LYS A 128 SHEET 5 A 7 LYS A 180 HIS A 187 -1 O LEU A 184 N VAL A 170 SHEET 6 A 7 SER A 205 SER A 213 -1 O SER A 210 N VAL A 183 SHEET 7 A 7 THR A 225 ASN A 227 -1 O LEU A 226 N VAL A 209 SHEET 1 B 7 TRP B 109 ASN B 114 0 SHEET 2 B 7 GLU B 117 ARG B 122 -1 O VAL B 121 N GLU B 110 SHEET 3 B 7 LYS B 128 ASN B 134 -1 O VAL B 131 N LEU B 120 SHEET 4 B 7 PHE B 168 ILE B 173 -1 O GLU B 171 N THR B 130 SHEET 5 B 7 LYS B 180 HIS B 187 -1 O CYS B 186 N PHE B 168 SHEET 6 B 7 SER B 205 SER B 213 -1 O SER B 210 N VAL B 183 SHEET 7 B 7 THR B 225 ASN B 227 -1 O LEU B 226 N VAL B 209 SHEET 1 C 7 GLU C 110 ASN C 114 0 SHEET 2 C 7 GLU C 117 LYS C 123 -1 O VAL C 121 N GLU C 110 SHEET 3 C 7 GLU C 127 ASN C 134 -1 O VAL C 131 N LEU C 120 SHEET 4 C 7 PHE C 168 LYS C 174 -1 O ILE C 173 N LYS C 128 SHEET 5 C 7 LYS C 180 HIS C 187 -1 O LEU C 184 N VAL C 170 SHEET 6 C 7 SER C 205 SER C 213 -1 O SER C 210 N VAL C 183 SHEET 7 C 7 THR C 225 ASN C 227 -1 O LEU C 226 N VAL C 209 CRYST1 115.680 123.770 137.110 90.00 90.00 90.00 I 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008645 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008080 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007293 0.00000