data_3RRU # _entry.id 3RRU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3RRU RCSB RCSB065301 WWPDB D_1000065301 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id HR3050E _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3RRU _pdbx_database_status.recvd_initial_deposition_date 2011-04-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Forouhar, F.' 1 'Lew, S.' 2 'Seetharaman, J.' 3 'Wang, H.' 4 'Ciccosanti, C.' 5 'Patel, D.' 6 'Acton, T.B.' 7 'Xiao, R.' 8 'Everett, J.K.' 9 'Montelione, G.T.' 10 'Hunt, J.F.' 11 'Tong, L.' 12 'Northeast Structural Genomics Consortium (NESG)' 13 # _citation.id primary _citation.title 'X-ray crystal structure of the VHS domain of human TOM1-like protein, Northeast Structural Genomics Consortium Target HR3050E' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Forouhar, F.' 1 primary 'Lew, S.' 2 primary 'Seetharaman, J.' 3 primary 'Wang, H.' 4 primary 'Ciccosanti, C.' 5 primary 'Patel, D.' 6 primary 'Acton, T.B.' 7 primary 'Xiao, R.' 8 primary 'Everett, J.K.' 9 primary 'Montelione, G.T.' 10 primary 'Hunt, J.F.' 11 primary 'Tong, L.' 12 # _cell.entry_id 3RRU _cell.length_a 122.047 _cell.length_b 122.047 _cell.length_c 55.095 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3RRU _symmetry.space_group_name_H-M 'P 31 1 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 151 _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'TOM1L1 protein' _entity.formula_weight 17483.631 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'VHS_Tom1, residues 9-150' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Target of myb1-like 1 (Chicken), isoform CRA_a' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GHHHHHHSHDPYATSVGHLIEKATFAGVQTEDWGQF(MSE)HICDIINTTQDGPKDAVKALKKRISKNYNHKEIQ LTLSLID(MSE)CVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQGFPGGVDVSEVKEVYLDL VKKG ; _entity_poly.pdbx_seq_one_letter_code_can ;MGHHHHHHSHDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSLIDM CVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQGFPGGVDVSEVKEVYLDLVKKG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier HR3050E # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 SER n 1 10 HIS n 1 11 ASP n 1 12 PRO n 1 13 TYR n 1 14 ALA n 1 15 THR n 1 16 SER n 1 17 VAL n 1 18 GLY n 1 19 HIS n 1 20 LEU n 1 21 ILE n 1 22 GLU n 1 23 LYS n 1 24 ALA n 1 25 THR n 1 26 PHE n 1 27 ALA n 1 28 GLY n 1 29 VAL n 1 30 GLN n 1 31 THR n 1 32 GLU n 1 33 ASP n 1 34 TRP n 1 35 GLY n 1 36 GLN n 1 37 PHE n 1 38 MSE n 1 39 HIS n 1 40 ILE n 1 41 CYS n 1 42 ASP n 1 43 ILE n 1 44 ILE n 1 45 ASN n 1 46 THR n 1 47 THR n 1 48 GLN n 1 49 ASP n 1 50 GLY n 1 51 PRO n 1 52 LYS n 1 53 ASP n 1 54 ALA n 1 55 VAL n 1 56 LYS n 1 57 ALA n 1 58 LEU n 1 59 LYS n 1 60 LYS n 1 61 ARG n 1 62 ILE n 1 63 SER n 1 64 LYS n 1 65 ASN n 1 66 TYR n 1 67 ASN n 1 68 HIS n 1 69 LYS n 1 70 GLU n 1 71 ILE n 1 72 GLN n 1 73 LEU n 1 74 THR n 1 75 LEU n 1 76 SER n 1 77 LEU n 1 78 ILE n 1 79 ASP n 1 80 MSE n 1 81 CYS n 1 82 VAL n 1 83 GLN n 1 84 ASN n 1 85 CYS n 1 86 GLY n 1 87 PRO n 1 88 SER n 1 89 PHE n 1 90 GLN n 1 91 SER n 1 92 LEU n 1 93 ILE n 1 94 VAL n 1 95 LYS n 1 96 LYS n 1 97 GLU n 1 98 PHE n 1 99 VAL n 1 100 LYS n 1 101 GLU n 1 102 ASN n 1 103 LEU n 1 104 VAL n 1 105 LYS n 1 106 LEU n 1 107 LEU n 1 108 ASN n 1 109 PRO n 1 110 ARG n 1 111 TYR n 1 112 ASN n 1 113 LEU n 1 114 PRO n 1 115 LEU n 1 116 ASP n 1 117 ILE n 1 118 GLN n 1 119 ASN n 1 120 ARG n 1 121 ILE n 1 122 LEU n 1 123 ASN n 1 124 PHE n 1 125 ILE n 1 126 LYS n 1 127 THR n 1 128 TRP n 1 129 SER n 1 130 GLN n 1 131 GLY n 1 132 PHE n 1 133 PRO n 1 134 GLY n 1 135 GLY n 1 136 VAL n 1 137 ASP n 1 138 VAL n 1 139 SER n 1 140 GLU n 1 141 VAL n 1 142 LYS n 1 143 GLU n 1 144 VAL n 1 145 TYR n 1 146 LEU n 1 147 ASP n 1 148 LEU n 1 149 VAL n 1 150 LYS n 1 151 LYS n 1 152 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'hCG_32771, tom1-like, TOM1L1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET14-15C _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8N749_HUMAN _struct_ref.pdbx_db_accession Q8N749 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSLIDMCVQNCGPSFQ SLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQGFPGGVDVSEVKEVYLDLVKKG ; _struct_ref.pdbx_align_begin 9 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3RRU A 11 ? 152 ? Q8N749 9 ? 150 ? 9 150 2 1 3RRU B 11 ? 152 ? Q8N749 9 ? 150 ? 9 150 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RRU MSE A 1 ? UNP Q8N749 ? ? 'EXPRESSION TAG' -1 1 1 3RRU GLY A 2 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 0 2 1 3RRU HIS A 3 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 1 3 1 3RRU HIS A 4 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 2 4 1 3RRU HIS A 5 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 3 5 1 3RRU HIS A 6 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 4 6 1 3RRU HIS A 7 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 5 7 1 3RRU HIS A 8 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 6 8 1 3RRU SER A 9 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 7 9 1 3RRU HIS A 10 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 8 10 2 3RRU MSE B 1 ? UNP Q8N749 ? ? 'EXPRESSION TAG' -1 11 2 3RRU GLY B 2 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 0 12 2 3RRU HIS B 3 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 1 13 2 3RRU HIS B 4 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 2 14 2 3RRU HIS B 5 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 3 15 2 3RRU HIS B 6 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 4 16 2 3RRU HIS B 7 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 5 17 2 3RRU HIS B 8 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 6 18 2 3RRU SER B 9 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 7 19 2 3RRU HIS B 10 ? UNP Q8N749 ? ? 'EXPRESSION TAG' 8 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3RRU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.39 _exptl_crystal.density_percent_sol 63.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details ;Protein solution: 10 mM Tris (pH 7.5), 100 mM sodium chloride, 5 mM DTT, and 0.02% NaN3. Reservoir solution: 100mM MES (pH 6), 40% PEG 8000, and 100mM Ammonium Sulfate, micro batch under oil, temperature 291K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2011-01-28 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97916 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97916 # _reflns.entry_id 3RRU _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 3.0 _reflns.number_obs 17498 _reflns.number_all 18360 _reflns.percent_possible_obs 95.3 _reflns.pdbx_Rmerge_I_obs 0.117 _reflns.pdbx_Rsym_value 0.104 _reflns.pdbx_netI_over_sigmaI 6.9 _reflns.B_iso_Wilson_estimate 43.2 _reflns.pdbx_redundancy 1.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.11 _reflns_shell.percent_possible_all 81.5 _reflns_shell.Rmerge_I_obs 0.339 _reflns_shell.pdbx_Rsym_value 0.293 _reflns_shell.meanI_over_sigI_obs 1.61 _reflns_shell.pdbx_redundancy 1.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1371 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3RRU _refine.ls_number_reflns_obs 17498 _refine.ls_number_reflns_all 18360 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 59077.03 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.98 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 95.3 _refine.ls_R_factor_obs 0.227 _refine.ls_R_factor_all 0.230 _refine.ls_R_factor_R_work 0.227 _refine.ls_R_factor_R_free 0.252 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.3 _refine.ls_number_reflns_R_free 1634 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 41.9 _refine.aniso_B[1][1] 4.76 _refine.aniso_B[2][2] 4.76 _refine.aniso_B[3][3] -9.51 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.3 _refine.solvent_model_param_bsol 4.55384 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3RRU _refine_analyze.Luzzati_coordinate_error_obs 0.39 _refine_analyze.Luzzati_sigma_a_obs 0.59 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.44 _refine_analyze.Luzzati_sigma_a_free 0.63 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2254 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2254 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 19.98 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.009 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.2 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 19.9 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 0.84 ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.11 _refine_ls_shell.number_reflns_R_work 1371 _refine_ls_shell.R_factor_R_work 0.368 _refine_ls_shell.percent_reflns_obs 81.5 _refine_ls_shell.R_factor_R_free 0.363 _refine_ls_shell.R_factor_R_free_error 0.031 _refine_ls_shell.percent_reflns_R_free 9.1 _refine_ls_shell.number_reflns_R_free 138 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1371 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3RRU _struct.title 'X-ray crystal structure of the VHS domain of human TOM1-like protein, Northeast Structural Genomics Consortium Target HR3050E' _struct.pdbx_descriptor 'TOM1L1 protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RRU _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;Structural Genomics, PSI-Biology, Northeast Structural Genomics Consortium, NESG, super-helical protein, Src-activating and signaling molecule protein, Target of Myb-like protein 1, SIGNALING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 11 ? ALA A 14 ? ASP A 9 ALA A 12 5 ? 4 HELX_P HELX_P2 2 THR A 15 ? THR A 25 ? THR A 13 THR A 23 1 ? 11 HELX_P HELX_P3 3 ASP A 33 ? THR A 47 ? ASP A 31 THR A 45 1 ? 15 HELX_P HELX_P4 4 ASP A 49 ? SER A 63 ? ASP A 47 SER A 61 1 ? 15 HELX_P HELX_P5 5 ASN A 67 ? CYS A 85 ? ASN A 65 CYS A 83 1 ? 19 HELX_P HELX_P6 6 GLY A 86 ? VAL A 94 ? GLY A 84 VAL A 92 1 ? 9 HELX_P HELX_P7 7 LYS A 95 ? LYS A 100 ? LYS A 93 LYS A 98 1 ? 6 HELX_P HELX_P8 8 LEU A 103 ? ASN A 112 ? LEU A 101 ASN A 110 5 ? 10 HELX_P HELX_P9 9 PRO A 114 ? GLN A 130 ? PRO A 112 GLN A 128 1 ? 17 HELX_P HELX_P10 10 VAL A 138 ? LYS A 151 ? VAL A 136 LYS A 149 1 ? 14 HELX_P HELX_P11 11 THR B 15 ? THR B 25 ? THR B 13 THR B 23 1 ? 11 HELX_P HELX_P12 12 ASP B 33 ? ASN B 45 ? ASP B 31 ASN B 43 1 ? 13 HELX_P HELX_P13 13 ASP B 49 ? SER B 63 ? ASP B 47 SER B 61 1 ? 15 HELX_P HELX_P14 14 ASN B 67 ? CYS B 85 ? ASN B 65 CYS B 83 1 ? 19 HELX_P HELX_P15 15 GLY B 86 ? VAL B 94 ? GLY B 84 VAL B 92 1 ? 9 HELX_P HELX_P16 16 LYS B 95 ? LYS B 100 ? LYS B 93 LYS B 98 1 ? 6 HELX_P HELX_P17 17 LEU B 103 ? ASN B 112 ? LEU B 101 ASN B 110 5 ? 10 HELX_P HELX_P18 18 PRO B 114 ? GLN B 130 ? PRO B 112 GLN B 128 1 ? 17 HELX_P HELX_P19 19 VAL B 138 ? LYS B 151 ? VAL B 136 LYS B 149 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PHE 37 C ? ? ? 1_555 A MSE 38 N ? ? A PHE 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A MSE 38 C ? ? ? 1_555 A HIS 39 N ? ? A MSE 36 A HIS 37 1_555 ? ? ? ? ? ? ? 1.323 ? covale3 covale ? ? A ASP 79 C ? ? ? 1_555 A MSE 80 N ? ? A ASP 77 A MSE 78 1_555 ? ? ? ? ? ? ? 1.327 ? covale4 covale ? ? A MSE 80 C ? ? ? 1_555 A CYS 81 N ? ? A MSE 78 A CYS 79 1_555 ? ? ? ? ? ? ? 1.325 ? covale5 covale ? ? B PHE 37 C ? ? ? 1_555 B MSE 38 N ? ? B PHE 35 B MSE 36 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? B MSE 38 C ? ? ? 1_555 B HIS 39 N ? ? B MSE 36 B HIS 37 1_555 ? ? ? ? ? ? ? 1.324 ? covale7 covale ? ? B ASP 79 C ? ? ? 1_555 B MSE 80 N ? ? B ASP 77 B MSE 78 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? B MSE 80 C ? ? ? 1_555 B CYS 81 N ? ? B MSE 78 B CYS 79 1_555 ? ? ? ? ? ? ? 1.321 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 3RRU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3RRU _atom_sites.fract_transf_matrix[1][1] 0.008194 _atom_sites.fract_transf_matrix[1][2] 0.004731 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009461 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018150 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -1 ? ? ? A . n A 1 2 GLY 2 0 ? ? ? A . n A 1 3 HIS 3 1 ? ? ? A . n A 1 4 HIS 4 2 ? ? ? A . n A 1 5 HIS 5 3 ? ? ? A . n A 1 6 HIS 6 4 ? ? ? A . n A 1 7 HIS 7 5 ? ? ? A . n A 1 8 HIS 8 6 ? ? ? A . n A 1 9 SER 9 7 ? ? ? A . n A 1 10 HIS 10 8 ? ? ? A . n A 1 11 ASP 11 9 9 ASP ASP A . n A 1 12 PRO 12 10 10 PRO PRO A . n A 1 13 TYR 13 11 11 TYR TYR A . n A 1 14 ALA 14 12 12 ALA ALA A . n A 1 15 THR 15 13 13 THR THR A . n A 1 16 SER 16 14 14 SER SER A . n A 1 17 VAL 17 15 15 VAL VAL A . n A 1 18 GLY 18 16 16 GLY GLY A . n A 1 19 HIS 19 17 17 HIS HIS A . n A 1 20 LEU 20 18 18 LEU LEU A . n A 1 21 ILE 21 19 19 ILE ILE A . n A 1 22 GLU 22 20 20 GLU GLU A . n A 1 23 LYS 23 21 21 LYS LYS A . n A 1 24 ALA 24 22 22 ALA ALA A . n A 1 25 THR 25 23 23 THR THR A . n A 1 26 PHE 26 24 24 PHE PHE A . n A 1 27 ALA 27 25 25 ALA ALA A . n A 1 28 GLY 28 26 26 GLY GLY A . n A 1 29 VAL 29 27 27 VAL VAL A . n A 1 30 GLN 30 28 28 GLN GLN A . n A 1 31 THR 31 29 29 THR THR A . n A 1 32 GLU 32 30 30 GLU GLU A . n A 1 33 ASP 33 31 31 ASP ASP A . n A 1 34 TRP 34 32 32 TRP TRP A . n A 1 35 GLY 35 33 33 GLY GLY A . n A 1 36 GLN 36 34 34 GLN GLN A . n A 1 37 PHE 37 35 35 PHE PHE A . n A 1 38 MSE 38 36 36 MSE MSE A . n A 1 39 HIS 39 37 37 HIS HIS A . n A 1 40 ILE 40 38 38 ILE ILE A . n A 1 41 CYS 41 39 39 CYS CYS A . n A 1 42 ASP 42 40 40 ASP ASP A . n A 1 43 ILE 43 41 41 ILE ILE A . n A 1 44 ILE 44 42 42 ILE ILE A . n A 1 45 ASN 45 43 43 ASN ASN A . n A 1 46 THR 46 44 44 THR THR A . n A 1 47 THR 47 45 45 THR THR A . n A 1 48 GLN 48 46 46 GLN GLN A . n A 1 49 ASP 49 47 47 ASP ASP A . n A 1 50 GLY 50 48 48 GLY GLY A . n A 1 51 PRO 51 49 49 PRO PRO A . n A 1 52 LYS 52 50 50 LYS LYS A . n A 1 53 ASP 53 51 51 ASP ASP A . n A 1 54 ALA 54 52 52 ALA ALA A . n A 1 55 VAL 55 53 53 VAL VAL A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 ALA 57 55 55 ALA ALA A . n A 1 58 LEU 58 56 56 LEU LEU A . n A 1 59 LYS 59 57 57 LYS LYS A . n A 1 60 LYS 60 58 58 LYS LYS A . n A 1 61 ARG 61 59 59 ARG ARG A . n A 1 62 ILE 62 60 60 ILE ILE A . n A 1 63 SER 63 61 61 SER SER A . n A 1 64 LYS 64 62 62 LYS LYS A . n A 1 65 ASN 65 63 63 ASN ASN A . n A 1 66 TYR 66 64 64 TYR TYR A . n A 1 67 ASN 67 65 65 ASN ASN A . n A 1 68 HIS 68 66 66 HIS HIS A . n A 1 69 LYS 69 67 67 LYS LYS A . n A 1 70 GLU 70 68 68 GLU GLU A . n A 1 71 ILE 71 69 69 ILE ILE A . n A 1 72 GLN 72 70 70 GLN GLN A . n A 1 73 LEU 73 71 71 LEU LEU A . n A 1 74 THR 74 72 72 THR THR A . n A 1 75 LEU 75 73 73 LEU LEU A . n A 1 76 SER 76 74 74 SER SER A . n A 1 77 LEU 77 75 75 LEU LEU A . n A 1 78 ILE 78 76 76 ILE ILE A . n A 1 79 ASP 79 77 77 ASP ASP A . n A 1 80 MSE 80 78 78 MSE MSE A . n A 1 81 CYS 81 79 79 CYS CYS A . n A 1 82 VAL 82 80 80 VAL VAL A . n A 1 83 GLN 83 81 81 GLN GLN A . n A 1 84 ASN 84 82 82 ASN ASN A . n A 1 85 CYS 85 83 83 CYS CYS A . n A 1 86 GLY 86 84 84 GLY GLY A . n A 1 87 PRO 87 85 85 PRO PRO A . n A 1 88 SER 88 86 86 SER SER A . n A 1 89 PHE 89 87 87 PHE PHE A . n A 1 90 GLN 90 88 88 GLN GLN A . n A 1 91 SER 91 89 89 SER SER A . n A 1 92 LEU 92 90 90 LEU LEU A . n A 1 93 ILE 93 91 91 ILE ILE A . n A 1 94 VAL 94 92 92 VAL VAL A . n A 1 95 LYS 95 93 93 LYS LYS A . n A 1 96 LYS 96 94 94 LYS LYS A . n A 1 97 GLU 97 95 95 GLU GLU A . n A 1 98 PHE 98 96 96 PHE PHE A . n A 1 99 VAL 99 97 97 VAL VAL A . n A 1 100 LYS 100 98 98 LYS LYS A . n A 1 101 GLU 101 99 99 GLU GLU A . n A 1 102 ASN 102 100 100 ASN ASN A . n A 1 103 LEU 103 101 101 LEU LEU A . n A 1 104 VAL 104 102 102 VAL VAL A . n A 1 105 LYS 105 103 103 LYS LYS A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 LEU 107 105 105 LEU LEU A . n A 1 108 ASN 108 106 106 ASN ASN A . n A 1 109 PRO 109 107 107 PRO PRO A . n A 1 110 ARG 110 108 108 ARG ARG A . n A 1 111 TYR 111 109 109 TYR TYR A . n A 1 112 ASN 112 110 110 ASN ASN A . n A 1 113 LEU 113 111 111 LEU LEU A . n A 1 114 PRO 114 112 112 PRO PRO A . n A 1 115 LEU 115 113 113 LEU LEU A . n A 1 116 ASP 116 114 114 ASP ASP A . n A 1 117 ILE 117 115 115 ILE ILE A . n A 1 118 GLN 118 116 116 GLN GLN A . n A 1 119 ASN 119 117 117 ASN ASN A . n A 1 120 ARG 120 118 118 ARG ARG A . n A 1 121 ILE 121 119 119 ILE ILE A . n A 1 122 LEU 122 120 120 LEU LEU A . n A 1 123 ASN 123 121 121 ASN ASN A . n A 1 124 PHE 124 122 122 PHE PHE A . n A 1 125 ILE 125 123 123 ILE ILE A . n A 1 126 LYS 126 124 124 LYS LYS A . n A 1 127 THR 127 125 125 THR THR A . n A 1 128 TRP 128 126 126 TRP TRP A . n A 1 129 SER 129 127 127 SER SER A . n A 1 130 GLN 130 128 128 GLN GLN A . n A 1 131 GLY 131 129 129 GLY GLY A . n A 1 132 PHE 132 130 130 PHE PHE A . n A 1 133 PRO 133 131 131 PRO PRO A . n A 1 134 GLY 134 132 132 GLY GLY A . n A 1 135 GLY 135 133 133 GLY GLY A . n A 1 136 VAL 136 134 134 VAL VAL A . n A 1 137 ASP 137 135 135 ASP ASP A . n A 1 138 VAL 138 136 136 VAL VAL A . n A 1 139 SER 139 137 137 SER SER A . n A 1 140 GLU 140 138 138 GLU GLU A . n A 1 141 VAL 141 139 139 VAL VAL A . n A 1 142 LYS 142 140 140 LYS LYS A . n A 1 143 GLU 143 141 141 GLU GLU A . n A 1 144 VAL 144 142 142 VAL VAL A . n A 1 145 TYR 145 143 143 TYR TYR A . n A 1 146 LEU 146 144 144 LEU LEU A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 LEU 148 146 146 LEU LEU A . n A 1 149 VAL 149 147 147 VAL VAL A . n A 1 150 LYS 150 148 148 LYS LYS A . n A 1 151 LYS 151 149 149 LYS LYS A . n A 1 152 GLY 152 150 ? ? ? A . n B 1 1 MSE 1 -1 ? ? ? B . n B 1 2 GLY 2 0 ? ? ? B . n B 1 3 HIS 3 1 ? ? ? B . n B 1 4 HIS 4 2 ? ? ? B . n B 1 5 HIS 5 3 ? ? ? B . n B 1 6 HIS 6 4 ? ? ? B . n B 1 7 HIS 7 5 ? ? ? B . n B 1 8 HIS 8 6 ? ? ? B . n B 1 9 SER 9 7 ? ? ? B . n B 1 10 HIS 10 8 ? ? ? B . n B 1 11 ASP 11 9 9 ASP ASP B . n B 1 12 PRO 12 10 10 PRO PRO B . n B 1 13 TYR 13 11 11 TYR TYR B . n B 1 14 ALA 14 12 12 ALA ALA B . n B 1 15 THR 15 13 13 THR THR B . n B 1 16 SER 16 14 14 SER SER B . n B 1 17 VAL 17 15 15 VAL VAL B . n B 1 18 GLY 18 16 16 GLY GLY B . n B 1 19 HIS 19 17 17 HIS HIS B . n B 1 20 LEU 20 18 18 LEU LEU B . n B 1 21 ILE 21 19 19 ILE ILE B . n B 1 22 GLU 22 20 20 GLU GLU B . n B 1 23 LYS 23 21 21 LYS LYS B . n B 1 24 ALA 24 22 22 ALA ALA B . n B 1 25 THR 25 23 23 THR THR B . n B 1 26 PHE 26 24 24 PHE PHE B . n B 1 27 ALA 27 25 25 ALA ALA B . n B 1 28 GLY 28 26 26 GLY GLY B . n B 1 29 VAL 29 27 27 VAL VAL B . n B 1 30 GLN 30 28 28 GLN GLN B . n B 1 31 THR 31 29 29 THR THR B . n B 1 32 GLU 32 30 30 GLU GLU B . n B 1 33 ASP 33 31 31 ASP ASP B . n B 1 34 TRP 34 32 32 TRP TRP B . n B 1 35 GLY 35 33 33 GLY GLY B . n B 1 36 GLN 36 34 34 GLN GLN B . n B 1 37 PHE 37 35 35 PHE PHE B . n B 1 38 MSE 38 36 36 MSE MSE B . n B 1 39 HIS 39 37 37 HIS HIS B . n B 1 40 ILE 40 38 38 ILE ILE B . n B 1 41 CYS 41 39 39 CYS CYS B . n B 1 42 ASP 42 40 40 ASP ASP B . n B 1 43 ILE 43 41 41 ILE ILE B . n B 1 44 ILE 44 42 42 ILE ILE B . n B 1 45 ASN 45 43 43 ASN ASN B . n B 1 46 THR 46 44 44 THR THR B . n B 1 47 THR 47 45 45 THR THR B . n B 1 48 GLN 48 46 46 GLN GLN B . n B 1 49 ASP 49 47 47 ASP ASP B . n B 1 50 GLY 50 48 48 GLY GLY B . n B 1 51 PRO 51 49 49 PRO PRO B . n B 1 52 LYS 52 50 50 LYS LYS B . n B 1 53 ASP 53 51 51 ASP ASP B . n B 1 54 ALA 54 52 52 ALA ALA B . n B 1 55 VAL 55 53 53 VAL VAL B . n B 1 56 LYS 56 54 54 LYS LYS B . n B 1 57 ALA 57 55 55 ALA ALA B . n B 1 58 LEU 58 56 56 LEU LEU B . n B 1 59 LYS 59 57 57 LYS LYS B . n B 1 60 LYS 60 58 58 LYS LYS B . n B 1 61 ARG 61 59 59 ARG ARG B . n B 1 62 ILE 62 60 60 ILE ILE B . n B 1 63 SER 63 61 61 SER SER B . n B 1 64 LYS 64 62 62 LYS LYS B . n B 1 65 ASN 65 63 63 ASN ASN B . n B 1 66 TYR 66 64 64 TYR TYR B . n B 1 67 ASN 67 65 65 ASN ASN B . n B 1 68 HIS 68 66 66 HIS HIS B . n B 1 69 LYS 69 67 67 LYS LYS B . n B 1 70 GLU 70 68 68 GLU GLU B . n B 1 71 ILE 71 69 69 ILE ILE B . n B 1 72 GLN 72 70 70 GLN GLN B . n B 1 73 LEU 73 71 71 LEU LEU B . n B 1 74 THR 74 72 72 THR THR B . n B 1 75 LEU 75 73 73 LEU LEU B . n B 1 76 SER 76 74 74 SER SER B . n B 1 77 LEU 77 75 75 LEU LEU B . n B 1 78 ILE 78 76 76 ILE ILE B . n B 1 79 ASP 79 77 77 ASP ASP B . n B 1 80 MSE 80 78 78 MSE MSE B . n B 1 81 CYS 81 79 79 CYS CYS B . n B 1 82 VAL 82 80 80 VAL VAL B . n B 1 83 GLN 83 81 81 GLN GLN B . n B 1 84 ASN 84 82 82 ASN ASN B . n B 1 85 CYS 85 83 83 CYS CYS B . n B 1 86 GLY 86 84 84 GLY GLY B . n B 1 87 PRO 87 85 85 PRO PRO B . n B 1 88 SER 88 86 86 SER SER B . n B 1 89 PHE 89 87 87 PHE PHE B . n B 1 90 GLN 90 88 88 GLN GLN B . n B 1 91 SER 91 89 89 SER SER B . n B 1 92 LEU 92 90 90 LEU LEU B . n B 1 93 ILE 93 91 91 ILE ILE B . n B 1 94 VAL 94 92 92 VAL VAL B . n B 1 95 LYS 95 93 93 LYS LYS B . n B 1 96 LYS 96 94 94 LYS LYS B . n B 1 97 GLU 97 95 95 GLU GLU B . n B 1 98 PHE 98 96 96 PHE PHE B . n B 1 99 VAL 99 97 97 VAL VAL B . n B 1 100 LYS 100 98 98 LYS LYS B . n B 1 101 GLU 101 99 99 GLU GLU B . n B 1 102 ASN 102 100 100 ASN ASN B . n B 1 103 LEU 103 101 101 LEU LEU B . n B 1 104 VAL 104 102 102 VAL VAL B . n B 1 105 LYS 105 103 103 LYS LYS B . n B 1 106 LEU 106 104 104 LEU LEU B . n B 1 107 LEU 107 105 105 LEU LEU B . n B 1 108 ASN 108 106 106 ASN ASN B . n B 1 109 PRO 109 107 107 PRO PRO B . n B 1 110 ARG 110 108 108 ARG ARG B . n B 1 111 TYR 111 109 109 TYR TYR B . n B 1 112 ASN 112 110 110 ASN ASN B . n B 1 113 LEU 113 111 111 LEU LEU B . n B 1 114 PRO 114 112 112 PRO PRO B . n B 1 115 LEU 115 113 113 LEU LEU B . n B 1 116 ASP 116 114 114 ASP ASP B . n B 1 117 ILE 117 115 115 ILE ILE B . n B 1 118 GLN 118 116 116 GLN GLN B . n B 1 119 ASN 119 117 117 ASN ASN B . n B 1 120 ARG 120 118 118 ARG ARG B . n B 1 121 ILE 121 119 119 ILE ILE B . n B 1 122 LEU 122 120 120 LEU LEU B . n B 1 123 ASN 123 121 121 ASN ASN B . n B 1 124 PHE 124 122 122 PHE PHE B . n B 1 125 ILE 125 123 123 ILE ILE B . n B 1 126 LYS 126 124 124 LYS LYS B . n B 1 127 THR 127 125 125 THR THR B . n B 1 128 TRP 128 126 126 TRP TRP B . n B 1 129 SER 129 127 127 SER SER B . n B 1 130 GLN 130 128 128 GLN GLN B . n B 1 131 GLY 131 129 129 GLY GLY B . n B 1 132 PHE 132 130 130 PHE PHE B . n B 1 133 PRO 133 131 131 PRO PRO B . n B 1 134 GLY 134 132 132 GLY GLY B . n B 1 135 GLY 135 133 133 GLY GLY B . n B 1 136 VAL 136 134 134 VAL VAL B . n B 1 137 ASP 137 135 135 ASP ASP B . n B 1 138 VAL 138 136 136 VAL VAL B . n B 1 139 SER 139 137 137 SER SER B . n B 1 140 GLU 140 138 138 GLU GLU B . n B 1 141 VAL 141 139 139 VAL VAL B . n B 1 142 LYS 142 140 140 LYS LYS B . n B 1 143 GLU 143 141 141 GLU GLU B . n B 1 144 VAL 144 142 142 VAL VAL B . n B 1 145 TYR 145 143 143 TYR TYR B . n B 1 146 LEU 146 144 144 LEU LEU B . n B 1 147 ASP 147 145 145 ASP ASP B . n B 1 148 LEU 148 146 146 LEU LEU B . n B 1 149 VAL 149 147 147 VAL VAL B . n B 1 150 LYS 150 148 148 LYS LYS B . n B 1 151 LYS 151 149 149 LYS LYS B . n B 1 152 GLY 152 150 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 38 A MSE 36 ? MET SELENOMETHIONINE 2 A MSE 80 A MSE 78 ? MET SELENOMETHIONINE 3 B MSE 38 B MSE 36 ? MET SELENOMETHIONINE 4 B MSE 80 B MSE 78 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A 2 1 B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-06-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 SnB phasing 'then SOLVE/RESOLVE' ? 2 CNS refinement '1.2 & XtalView' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 61 ? ? -33.62 127.44 2 1 LYS A 62 ? ? 32.31 43.53 3 1 ASN A 100 ? ? -146.95 -68.71 4 1 ASN A 110 ? ? 23.08 43.39 5 1 VAL A 134 ? ? 30.84 102.23 6 1 THR B 13 ? ? -48.93 159.28 7 1 SER B 14 ? ? -46.68 -74.65 8 1 ASP B 31 ? ? -109.80 77.37 9 1 LYS B 62 ? ? 38.80 41.94 10 1 ASN B 100 ? ? -147.78 -68.57 11 1 ASN B 110 ? ? 23.85 42.76 12 1 VAL B 134 ? ? 36.73 98.90 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -1 ? A MSE 1 2 1 Y 1 A GLY 0 ? A GLY 2 3 1 Y 1 A HIS 1 ? A HIS 3 4 1 Y 1 A HIS 2 ? A HIS 4 5 1 Y 1 A HIS 3 ? A HIS 5 6 1 Y 1 A HIS 4 ? A HIS 6 7 1 Y 1 A HIS 5 ? A HIS 7 8 1 Y 1 A HIS 6 ? A HIS 8 9 1 Y 1 A SER 7 ? A SER 9 10 1 Y 1 A HIS 8 ? A HIS 10 11 1 Y 1 A GLY 150 ? A GLY 152 12 1 Y 1 B MSE -1 ? B MSE 1 13 1 Y 1 B GLY 0 ? B GLY 2 14 1 Y 1 B HIS 1 ? B HIS 3 15 1 Y 1 B HIS 2 ? B HIS 4 16 1 Y 1 B HIS 3 ? B HIS 5 17 1 Y 1 B HIS 4 ? B HIS 6 18 1 Y 1 B HIS 5 ? B HIS 7 19 1 Y 1 B HIS 6 ? B HIS 8 20 1 Y 1 B SER 7 ? B SER 9 21 1 Y 1 B HIS 8 ? B HIS 10 22 1 Y 1 B GLY 150 ? B GLY 152 #