data_3RTM # _entry.id 3RTM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3RTM RCSB RCSB065361 WWPDB D_1000065361 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RSV . unspecified PDB 3RSX . unspecified PDB 3RTH . unspecified PDB 3RTN . unspecified # _pdbx_database_status.entry_id 3RTM _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-03 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Sickmier, E.A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;From Fragment Screening to In Vivo Efficacy: Optimization of a Series of 2-Aminoquinolines as Potent Inhibitors of Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1). ; _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 54 _citation.page_first 5836 _citation.page_last 5857 _citation.year 2011 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21707077 _citation.pdbx_database_id_DOI 10.1021/jm200544q # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cheng, Y.' 1 primary 'Judd, T.C.' 2 primary 'Bartberger, M.D.' 3 primary 'Brown, J.' 4 primary 'Chen, K.' 5 primary 'Fremeau, R.T.' 6 primary 'Hickman, D.' 7 primary 'Hitchcock, S.A.' 8 primary 'Jordan, B.' 9 primary 'Li, V.' 10 primary 'Lopez, P.' 11 primary 'Louie, S.W.' 12 primary 'Luo, Y.' 13 primary 'Michelsen, K.' 14 primary 'Nixey, T.' 15 primary 'Powers, T.S.' 16 primary 'Rattan, C.' 17 primary 'Sickmier, E.A.' 18 primary 'St Jean, D.J.' 19 primary 'Wahl, R.C.' 20 primary 'Wen, P.H.' 21 primary 'Wood, S.' 22 # _cell.length_a 101.875 _cell.length_b 101.875 _cell.length_c 169.165 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3RTM _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.entry_id 3RTM _symmetry.Int_Tables_number 178 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Beta-secretase 1' 45822.445 1 3.4.23.46 'R14K, R15K' 'UNP residues 43-453' ? 2 non-polymer syn 'IODIDE ION' 126.904 3 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn '3-(2-aminoquinolin-3-yl)-N-cyclohexyl-N-methylpropanamide' 311.421 1 ? ? ? ? 5 water nat water 18.015 54 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Aspartyl protease 2, ASP2, Asp 2, Beta-site amyloid precursor protein cleaving enzyme 1, Beta-site APP cleaving enzyme 1, Memapsin-2, Membrane-associated aspartic protease 2 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LPRETDEEPEEPGKKGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYR DLRKGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYN YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL PQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMED CGYNIPQTDES ; _entity_poly.pdbx_seq_one_letter_code_can ;LPRETDEEPEEPGKKGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYR DLRKGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYN YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL PQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMED CGYNIPQTDES ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 PRO n 1 3 ARG n 1 4 GLU n 1 5 THR n 1 6 ASP n 1 7 GLU n 1 8 GLU n 1 9 PRO n 1 10 GLU n 1 11 GLU n 1 12 PRO n 1 13 GLY n 1 14 LYS n 1 15 LYS n 1 16 GLY n 1 17 SER n 1 18 PHE n 1 19 VAL n 1 20 GLU n 1 21 MET n 1 22 VAL n 1 23 ASP n 1 24 ASN n 1 25 LEU n 1 26 ARG n 1 27 GLY n 1 28 LYS n 1 29 SER n 1 30 GLY n 1 31 GLN n 1 32 GLY n 1 33 TYR n 1 34 TYR n 1 35 VAL n 1 36 GLU n 1 37 MET n 1 38 THR n 1 39 VAL n 1 40 GLY n 1 41 SER n 1 42 PRO n 1 43 PRO n 1 44 GLN n 1 45 THR n 1 46 LEU n 1 47 ASN n 1 48 ILE n 1 49 LEU n 1 50 VAL n 1 51 ASP n 1 52 THR n 1 53 GLY n 1 54 SER n 1 55 SER n 1 56 ASN n 1 57 PHE n 1 58 ALA n 1 59 VAL n 1 60 GLY n 1 61 ALA n 1 62 ALA n 1 63 PRO n 1 64 HIS n 1 65 PRO n 1 66 PHE n 1 67 LEU n 1 68 HIS n 1 69 ARG n 1 70 TYR n 1 71 TYR n 1 72 GLN n 1 73 ARG n 1 74 GLN n 1 75 LEU n 1 76 SER n 1 77 SER n 1 78 THR n 1 79 TYR n 1 80 ARG n 1 81 ASP n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 GLY n 1 86 VAL n 1 87 TYR n 1 88 VAL n 1 89 PRO n 1 90 TYR n 1 91 THR n 1 92 GLN n 1 93 GLY n 1 94 LYS n 1 95 TRP n 1 96 GLU n 1 97 GLY n 1 98 GLU n 1 99 LEU n 1 100 GLY n 1 101 THR n 1 102 ASP n 1 103 LEU n 1 104 VAL n 1 105 SER n 1 106 ILE n 1 107 PRO n 1 108 HIS n 1 109 GLY n 1 110 PRO n 1 111 ASN n 1 112 VAL n 1 113 THR n 1 114 VAL n 1 115 ARG n 1 116 ALA n 1 117 ASN n 1 118 ILE n 1 119 ALA n 1 120 ALA n 1 121 ILE n 1 122 THR n 1 123 GLU n 1 124 SER n 1 125 ASP n 1 126 LYS n 1 127 PHE n 1 128 PHE n 1 129 ILE n 1 130 ASN n 1 131 GLY n 1 132 SER n 1 133 ASN n 1 134 TRP n 1 135 GLU n 1 136 GLY n 1 137 ILE n 1 138 LEU n 1 139 GLY n 1 140 LEU n 1 141 ALA n 1 142 TYR n 1 143 ALA n 1 144 GLU n 1 145 ILE n 1 146 ALA n 1 147 ARG n 1 148 PRO n 1 149 ASP n 1 150 ASP n 1 151 SER n 1 152 LEU n 1 153 GLU n 1 154 PRO n 1 155 PHE n 1 156 PHE n 1 157 ASP n 1 158 SER n 1 159 LEU n 1 160 VAL n 1 161 LYS n 1 162 GLN n 1 163 THR n 1 164 HIS n 1 165 VAL n 1 166 PRO n 1 167 ASN n 1 168 LEU n 1 169 PHE n 1 170 SER n 1 171 LEU n 1 172 GLN n 1 173 LEU n 1 174 CYS n 1 175 GLY n 1 176 ALA n 1 177 GLY n 1 178 PHE n 1 179 PRO n 1 180 LEU n 1 181 ASN n 1 182 GLN n 1 183 SER n 1 184 GLU n 1 185 VAL n 1 186 LEU n 1 187 ALA n 1 188 SER n 1 189 VAL n 1 190 GLY n 1 191 GLY n 1 192 SER n 1 193 MET n 1 194 ILE n 1 195 ILE n 1 196 GLY n 1 197 GLY n 1 198 ILE n 1 199 ASP n 1 200 HIS n 1 201 SER n 1 202 LEU n 1 203 TYR n 1 204 THR n 1 205 GLY n 1 206 SER n 1 207 LEU n 1 208 TRP n 1 209 TYR n 1 210 THR n 1 211 PRO n 1 212 ILE n 1 213 ARG n 1 214 ARG n 1 215 GLU n 1 216 TRP n 1 217 TYR n 1 218 TYR n 1 219 GLU n 1 220 VAL n 1 221 ILE n 1 222 ILE n 1 223 VAL n 1 224 ARG n 1 225 VAL n 1 226 GLU n 1 227 ILE n 1 228 ASN n 1 229 GLY n 1 230 GLN n 1 231 ASP n 1 232 LEU n 1 233 LYS n 1 234 MET n 1 235 ASP n 1 236 CYS n 1 237 LYS n 1 238 GLU n 1 239 TYR n 1 240 ASN n 1 241 TYR n 1 242 ASP n 1 243 LYS n 1 244 SER n 1 245 ILE n 1 246 VAL n 1 247 ASP n 1 248 SER n 1 249 GLY n 1 250 THR n 1 251 THR n 1 252 ASN n 1 253 LEU n 1 254 ARG n 1 255 LEU n 1 256 PRO n 1 257 LYS n 1 258 LYS n 1 259 VAL n 1 260 PHE n 1 261 GLU n 1 262 ALA n 1 263 ALA n 1 264 VAL n 1 265 LYS n 1 266 SER n 1 267 ILE n 1 268 LYS n 1 269 ALA n 1 270 ALA n 1 271 SER n 1 272 SER n 1 273 THR n 1 274 GLU n 1 275 LYS n 1 276 PHE n 1 277 PRO n 1 278 ASP n 1 279 GLY n 1 280 PHE n 1 281 TRP n 1 282 LEU n 1 283 GLY n 1 284 GLU n 1 285 GLN n 1 286 LEU n 1 287 VAL n 1 288 CYS n 1 289 TRP n 1 290 GLN n 1 291 ALA n 1 292 GLY n 1 293 THR n 1 294 THR n 1 295 PRO n 1 296 TRP n 1 297 ASN n 1 298 ILE n 1 299 PHE n 1 300 PRO n 1 301 VAL n 1 302 ILE n 1 303 SER n 1 304 LEU n 1 305 TYR n 1 306 LEU n 1 307 MET n 1 308 GLY n 1 309 GLU n 1 310 VAL n 1 311 THR n 1 312 ASN n 1 313 GLN n 1 314 SER n 1 315 PHE n 1 316 ARG n 1 317 ILE n 1 318 THR n 1 319 ILE n 1 320 LEU n 1 321 PRO n 1 322 GLN n 1 323 GLN n 1 324 TYR n 1 325 LEU n 1 326 ARG n 1 327 PRO n 1 328 VAL n 1 329 GLU n 1 330 ASP n 1 331 VAL n 1 332 ALA n 1 333 THR n 1 334 SER n 1 335 GLN n 1 336 ASP n 1 337 ASP n 1 338 CYS n 1 339 TYR n 1 340 LYS n 1 341 PHE n 1 342 ALA n 1 343 ILE n 1 344 SER n 1 345 GLN n 1 346 SER n 1 347 SER n 1 348 THR n 1 349 GLY n 1 350 THR n 1 351 VAL n 1 352 MET n 1 353 GLY n 1 354 ALA n 1 355 VAL n 1 356 ILE n 1 357 MET n 1 358 GLU n 1 359 GLY n 1 360 PHE n 1 361 TYR n 1 362 VAL n 1 363 VAL n 1 364 PHE n 1 365 ASP n 1 366 ARG n 1 367 ALA n 1 368 ARG n 1 369 LYS n 1 370 ARG n 1 371 ILE n 1 372 GLY n 1 373 PHE n 1 374 ALA n 1 375 VAL n 1 376 SER n 1 377 ALA n 1 378 CYS n 1 379 HIS n 1 380 VAL n 1 381 HIS n 1 382 ASP n 1 383 GLU n 1 384 PHE n 1 385 ARG n 1 386 THR n 1 387 ALA n 1 388 ALA n 1 389 VAL n 1 390 GLU n 1 391 GLY n 1 392 PRO n 1 393 PHE n 1 394 VAL n 1 395 THR n 1 396 LEU n 1 397 ASP n 1 398 MET n 1 399 GLU n 1 400 ASP n 1 401 CYS n 1 402 GLY n 1 403 TYR n 1 404 ASN n 1 405 ILE n 1 406 PRO n 1 407 GLN n 1 408 THR n 1 409 ASP n 1 410 GLU n 1 411 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BACE1, BACE, KIAA1149' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACE1_HUMAN _struct_ref.pdbx_db_accession P56817 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LPRETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYR DLRKGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYN YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL PQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMED CGYNIPQTDES ; _struct_ref.pdbx_align_begin 43 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3RTM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 411 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P56817 _struct_ref_seq.db_align_beg 43 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 453 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -18 _struct_ref_seq.pdbx_auth_seq_align_end 392 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3RTM LYS A 14 ? UNP P56817 ARG 56 'ENGINEERED MUTATION' -5 1 1 3RTM LYS A 15 ? UNP P56817 ARG 57 'ENGINEERED MUTATION' -4 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RTM non-polymer . '3-(2-aminoquinolin-3-yl)-N-cyclohexyl-N-methylpropanamide' ? 'C19 H25 N3 O' 311.421 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3RTM _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;20% (w/v) PEG 5000 monomethylethyl ether (MME), 200mM sodium citrate (pH 6.6) and 200mM sodium iodide, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2008-02-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 # _reflns.entry_id 3RTM _reflns.d_resolution_high 2.750 _reflns.d_resolution_low 20.000 _reflns.number_obs 13736 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_netI_over_sigmaI 12.500 _reflns.pdbx_chi_squared 1.060 _reflns.pdbx_redundancy 7.600 _reflns.percent_possible_obs 98.500 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.750 2.850 ? ? ? 0.387 ? ? 0.989 5.700 ? 1308 97.500 1 1 2.850 2.960 ? ? ? 0.313 ? ? 1.100 7.300 ? 1354 99.500 2 1 2.960 3.100 ? ? ? 0.232 ? ? 1.097 8.000 ? 1345 99.600 3 1 3.100 3.260 ? ? ? 0.184 ? ? 1.081 8.000 ? 1362 99.300 4 1 3.260 3.460 ? ? ? 0.140 ? ? 1.058 8.100 ? 1352 99.000 5 1 3.460 3.730 ? ? ? 0.097 ? ? 1.018 8.000 ? 1371 99.100 6 1 3.730 4.100 ? ? ? 0.080 ? ? 1.038 7.900 ? 1371 98.700 7 1 4.100 4.690 ? ? ? 0.067 ? ? 1.075 7.800 ? 1388 98.300 8 1 4.690 5.880 ? ? ? 0.057 ? ? 1.102 7.500 ? 1394 97.900 9 1 5.880 20.000 ? ? ? 0.056 ? ? 1.027 7.500 ? 1491 96.500 10 1 # _refine.entry_id 3RTM _refine.ls_d_res_high 2.7600 _refine.ls_d_res_low 20.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.0500 _refine.ls_number_reflns_obs 13653 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY' _refine.ls_R_factor_obs 0.2246 _refine.ls_R_factor_R_work 0.2212 _refine.ls_wR_factor_R_work 0.2169 _refine.ls_R_factor_R_free 0.2884 _refine.ls_wR_factor_R_free 0.2884 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 680 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 54.7680 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.4500 _refine.aniso_B[2][2] 1.4500 _refine.aniso_B[3][3] -2.1800 _refine.aniso_B[1][2] 0.7300 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9290 _refine.correlation_coeff_Fo_to_Fc_free 0.8960 _refine.overall_SU_R_Cruickshank_DPI 1.1049 _refine.overall_SU_R_free 0.3921 _refine.pdbx_overall_ESU_R_Free 0.3920 _refine.overall_SU_ML 0.3000 _refine.overall_SU_B 14.5630 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7863 _refine.B_iso_max 104.550 _refine.B_iso_min 17.790 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.ls_R_factor_all ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2910 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 54 _refine_hist.number_atoms_total 3002 _refine_hist.d_res_high 2.7600 _refine_hist.d_res_low 20.0000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 3022 0.013 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 4103 1.455 1.955 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 366 7.047 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 137 35.714 23.723 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 477 18.435 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 17 16.039 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 442 0.090 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2308 0.006 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1828 0.751 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2956 1.399 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1194 1.667 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 1147 2.851 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.76 _refine_ls_shell.d_res_low 2.8300 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 93.9100 _refine_ls_shell.number_reflns_R_work 888 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2780 _refine_ls_shell.R_factor_R_free 0.3270 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 926 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3RTM _struct.title 'Structure of Bace-1 (Beta-Secretase) in Complex with 3-(2-Aminoquinolin-3-yl)-N-cyclohexyl-N-methylpropanamide' _struct.pdbx_descriptor 'Beta-secretase 1 (E.C.3.4.23.46)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3RTM _struct_keywords.pdbx_keywords 'Hydrolase/Hydrolase Inhibitor' _struct_keywords.text 'ASPARTYL PROTEASE, Hydrolase-Hydrolase Inhibitor complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 18 ? VAL A 22 ? PHE A -1 VAL A 3 5 ? 5 HELX_P HELX_P2 2 GLN A 72 ? SER A 76 ? GLN A 53 SER A 57 5 ? 5 HELX_P HELX_P3 3 TYR A 142 ? ALA A 146 ? TYR A 123 ALA A 127 5 ? 5 HELX_P HELX_P4 4 PRO A 154 ? THR A 163 ? PRO A 135 THR A 144 1 ? 10 HELX_P HELX_P5 5 ASP A 199 ? SER A 201 ? ASP A 180 SER A 182 5 ? 3 HELX_P HELX_P6 6 ASP A 235 ? TYR A 239 ? ASP A 216 TYR A 220 5 ? 5 HELX_P HELX_P7 7 LYS A 257 ? SER A 271 ? LYS A 238 SER A 252 1 ? 15 HELX_P HELX_P8 8 PRO A 277 ? LEU A 282 ? PRO A 258 LEU A 263 1 ? 6 HELX_P HELX_P9 9 LEU A 320 ? TYR A 324 ? LEU A 301 TYR A 305 1 ? 5 HELX_P HELX_P10 10 GLY A 353 ? GLU A 358 ? GLY A 334 GLU A 339 1 ? 6 HELX_P HELX_P11 11 ARG A 366 ? ARG A 368 ? ARG A 347 ARG A 349 5 ? 3 HELX_P HELX_P12 12 ASP A 397 ? GLY A 402 ? ASP A 378 GLY A 383 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 174 SG ? ? ? 1_555 A CYS 378 SG ? ? A CYS 155 A CYS 359 1_555 ? ? ? ? ? ? ? 2.075 ? disulf2 disulf ? ? A CYS 236 SG ? ? ? 1_555 A CYS 401 SG ? ? A CYS 217 A CYS 382 1_555 ? ? ? ? ? ? ? 2.040 ? disulf3 disulf ? ? A CYS 288 SG ? ? ? 1_555 A CYS 338 SG ? ? A CYS 269 A CYS 319 1_555 ? ? ? ? ? ? ? 2.060 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 41 A . ? SER 22 A PRO 42 A ? PRO 23 A 1 -9.24 2 ARG 147 A . ? ARG 128 A PRO 148 A ? PRO 129 A 1 4.00 3 TYR 241 A . ? TYR 222 A ASP 242 A ? ASP 223 A 1 -2.74 4 GLY 391 A . ? GLY 372 A PRO 392 A ? PRO 373 A 1 -0.66 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 13 ? C ? 4 ? D ? 4 ? E ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel B 9 10 ? anti-parallel B 10 11 ? anti-parallel B 11 12 ? anti-parallel B 12 13 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 80 ? TYR A 90 ? ARG A 61 TYR A 71 A 2 GLY A 93 ? SER A 105 ? GLY A 74 SER A 86 A 3 TYR A 33 ? VAL A 39 ? TYR A 14 VAL A 20 A 4 LEU A 25 ? LYS A 28 ? LEU A 6 LYS A 9 A 5 SER A 188 ? ILE A 195 ? SER A 169 ILE A 176 A 6 PHE A 169 ? LEU A 173 ? PHE A 150 LEU A 154 A 7 PHE A 360 ? ASP A 365 ? PHE A 341 ASP A 346 A 8 ARG A 370 ? SER A 376 ? ARG A 351 SER A 357 A 9 TYR A 203 ? PRO A 211 ? TYR A 184 PRO A 192 B 1 ARG A 80 ? TYR A 90 ? ARG A 61 TYR A 71 B 2 GLY A 93 ? SER A 105 ? GLY A 74 SER A 86 B 3 VAL A 114 ? ASP A 125 ? VAL A 95 ASP A 106 B 4 PHE A 57 ? GLY A 60 ? PHE A 38 GLY A 41 B 5 GLY A 136 ? GLY A 139 ? GLY A 117 GLY A 120 B 6 GLN A 44 ? ASP A 51 ? GLN A 25 ASP A 32 B 7 TYR A 33 ? VAL A 39 ? TYR A 14 VAL A 20 B 8 LEU A 25 ? LYS A 28 ? LEU A 6 LYS A 9 B 9 SER A 188 ? ILE A 195 ? SER A 169 ILE A 176 B 10 PHE A 169 ? LEU A 173 ? PHE A 150 LEU A 154 B 11 PHE A 360 ? ASP A 365 ? PHE A 341 ASP A 346 B 12 ARG A 370 ? SER A 376 ? ARG A 351 SER A 357 B 13 TYR A 203 ? PRO A 211 ? TYR A 184 PRO A 192 C 1 ILE A 222 ? ILE A 227 ? ILE A 203 ILE A 208 C 2 ILE A 302 ? MET A 307 ? ILE A 283 MET A 288 C 3 GLN A 313 ? ILE A 319 ? GLN A 294 ILE A 300 C 4 ALA A 388 ? VAL A 394 ? ALA A 369 VAL A 375 D 1 SER A 244 ? VAL A 246 ? SER A 225 VAL A 227 D 2 THR A 350 ? MET A 352 ? THR A 331 MET A 333 D 3 LEU A 253 ? PRO A 256 ? LEU A 234 PRO A 237 D 4 ILE A 343 ? SER A 346 ? ILE A 324 SER A 327 E 1 VAL A 287 ? CYS A 288 ? VAL A 268 CYS A 269 E 2 CYS A 338 ? PHE A 341 ? CYS A 319 PHE A 322 E 3 LEU A 325 ? PRO A 327 ? LEU A 306 PRO A 308 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 88 ? N VAL A 69 O TRP A 95 ? O TRP A 76 A 2 3 O SER A 105 ? O SER A 86 N THR A 38 ? N THR A 19 A 3 4 O TYR A 34 ? O TYR A 15 N ARG A 26 ? N ARG A 7 A 4 5 N LEU A 25 ? N LEU A 6 O GLY A 191 ? O GLY A 172 A 5 6 O SER A 192 ? O SER A 173 N GLN A 172 ? N GLN A 153 A 6 7 N PHE A 169 ? N PHE A 150 O PHE A 364 ? O PHE A 345 A 7 8 N VAL A 363 ? N VAL A 344 O GLY A 372 ? O GLY A 353 A 8 9 O ILE A 371 ? O ILE A 352 N THR A 210 ? N THR A 191 B 1 2 N VAL A 88 ? N VAL A 69 O TRP A 95 ? O TRP A 76 B 2 3 N VAL A 104 ? N VAL A 85 O VAL A 114 ? O VAL A 95 B 3 4 O ILE A 121 ? O ILE A 102 N VAL A 59 ? N VAL A 40 B 4 5 N ALA A 58 ? N ALA A 39 O ILE A 137 ? O ILE A 118 B 5 6 O LEU A 138 ? O LEU A 119 N LEU A 49 ? N LEU A 30 B 6 7 O LEU A 46 ? O LEU A 27 N MET A 37 ? N MET A 18 B 7 8 O TYR A 34 ? O TYR A 15 N ARG A 26 ? N ARG A 7 B 8 9 N LEU A 25 ? N LEU A 6 O GLY A 191 ? O GLY A 172 B 9 10 O SER A 192 ? O SER A 173 N GLN A 172 ? N GLN A 153 B 10 11 N PHE A 169 ? N PHE A 150 O PHE A 364 ? O PHE A 345 B 11 12 N VAL A 363 ? N VAL A 344 O GLY A 372 ? O GLY A 353 B 12 13 O ILE A 371 ? O ILE A 352 N THR A 210 ? N THR A 191 C 1 2 N ARG A 224 ? N ARG A 205 O TYR A 305 ? O TYR A 286 C 2 3 N LEU A 304 ? N LEU A 285 O ILE A 317 ? O ILE A 298 C 3 4 N ARG A 316 ? N ARG A 297 O GLU A 390 ? O GLU A 371 D 1 2 N ILE A 245 ? N ILE A 226 O MET A 352 ? O MET A 333 D 2 3 O VAL A 351 ? O VAL A 332 N ARG A 254 ? N ARG A 235 D 3 4 N LEU A 255 ? N LEU A 236 O SER A 344 ? O SER A 325 E 1 2 N VAL A 287 ? N VAL A 268 O TYR A 339 ? O TYR A 320 E 2 3 O LYS A 340 ? O LYS A 321 N ARG A 326 ? N ARG A 307 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1502' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1503' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE IOD A 1505' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL A 393' AC5 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 394' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE RTM A 395' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 SER A 124 ? SER A 105 . ? 1_555 ? 2 AC2 1 LYS A 126 ? LYS A 107 . ? 1_555 ? 3 AC3 1 ARG A 368 ? ARG A 349 . ? 1_555 ? 4 AC4 3 ARG A 69 ? ARG A 50 . ? 1_555 ? 5 AC4 3 TYR A 70 ? TYR A 51 . ? 1_555 ? 6 AC4 3 GLN A 72 ? GLN A 53 . ? 1_555 ? 7 AC5 7 LYS A 28 ? LYS A 9 . ? 1_555 ? 8 AC5 7 GLY A 30 ? GLY A 11 . ? 1_555 ? 9 AC5 7 GLY A 32 ? GLY A 13 . ? 1_555 ? 10 AC5 7 VAL A 189 ? VAL A 170 . ? 1_555 ? 11 AC5 7 THR A 251 ? THR A 232 . ? 1_555 ? 12 AC5 7 ARG A 326 ? ARG A 307 . ? 1_555 ? 13 AC5 7 GLU A 358 ? GLU A 339 . ? 1_555 ? 14 AC6 6 ASP A 51 ? ASP A 32 . ? 1_555 ? 15 AC6 6 SER A 54 ? SER A 35 . ? 1_555 ? 16 AC6 6 ILE A 137 ? ILE A 118 . ? 1_555 ? 17 AC6 6 ASP A 247 ? ASP A 228 . ? 1_555 ? 18 AC6 6 GLY A 249 ? GLY A 230 . ? 1_555 ? 19 AC6 6 THR A 250 ? THR A 231 . ? 1_555 ? # _atom_sites.entry_id 3RTM _atom_sites.fract_transf_matrix[1][1] 0.009816 _atom_sites.fract_transf_matrix[1][2] 0.005667 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011334 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005911 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 -18 ? ? ? A . n A 1 2 PRO 2 -17 ? ? ? A . n A 1 3 ARG 3 -16 ? ? ? A . n A 1 4 GLU 4 -15 ? ? ? A . n A 1 5 THR 5 -14 ? ? ? A . n A 1 6 ASP 6 -13 ? ? ? A . n A 1 7 GLU 7 -12 ? ? ? A . n A 1 8 GLU 8 -11 ? ? ? A . n A 1 9 PRO 9 -10 ? ? ? A . n A 1 10 GLU 10 -9 ? ? ? A . n A 1 11 GLU 11 -8 ? ? ? A . n A 1 12 PRO 12 -7 ? ? ? A . n A 1 13 GLY 13 -6 ? ? ? A . n A 1 14 LYS 14 -5 ? ? ? A . n A 1 15 LYS 15 -4 ? ? ? A . n A 1 16 GLY 16 -3 ? ? ? A . n A 1 17 SER 17 -2 ? ? ? A . n A 1 18 PHE 18 -1 -1 PHE PHE A . n A 1 19 VAL 19 0 0 VAL VAL A . n A 1 20 GLU 20 1 1 GLU GLU A . n A 1 21 MET 21 2 2 MET MET A . n A 1 22 VAL 22 3 3 VAL VAL A . n A 1 23 ASP 23 4 4 ASP ASP A . n A 1 24 ASN 24 5 5 ASN ASN A . n A 1 25 LEU 25 6 6 LEU LEU A . n A 1 26 ARG 26 7 7 ARG ARG A . n A 1 27 GLY 27 8 8 GLY GLY A . n A 1 28 LYS 28 9 9 LYS LYS A . n A 1 29 SER 29 10 10 SER SER A . n A 1 30 GLY 30 11 11 GLY GLY A . n A 1 31 GLN 31 12 12 GLN GLN A . n A 1 32 GLY 32 13 13 GLY GLY A . n A 1 33 TYR 33 14 14 TYR TYR A . n A 1 34 TYR 34 15 15 TYR TYR A . n A 1 35 VAL 35 16 16 VAL VAL A . n A 1 36 GLU 36 17 17 GLU GLU A . n A 1 37 MET 37 18 18 MET MET A . n A 1 38 THR 38 19 19 THR THR A . n A 1 39 VAL 39 20 20 VAL VAL A . n A 1 40 GLY 40 21 21 GLY GLY A . n A 1 41 SER 41 22 22 SER SER A . n A 1 42 PRO 42 23 23 PRO PRO A . n A 1 43 PRO 43 24 24 PRO PRO A . n A 1 44 GLN 44 25 25 GLN GLN A . n A 1 45 THR 45 26 26 THR THR A . n A 1 46 LEU 46 27 27 LEU LEU A . n A 1 47 ASN 47 28 28 ASN ASN A . n A 1 48 ILE 48 29 29 ILE ILE A . n A 1 49 LEU 49 30 30 LEU LEU A . n A 1 50 VAL 50 31 31 VAL VAL A . n A 1 51 ASP 51 32 32 ASP ASP A . n A 1 52 THR 52 33 33 THR THR A . n A 1 53 GLY 53 34 34 GLY GLY A . n A 1 54 SER 54 35 35 SER SER A . n A 1 55 SER 55 36 36 SER SER A . n A 1 56 ASN 56 37 37 ASN ASN A . n A 1 57 PHE 57 38 38 PHE PHE A . n A 1 58 ALA 58 39 39 ALA ALA A . n A 1 59 VAL 59 40 40 VAL VAL A . n A 1 60 GLY 60 41 41 GLY GLY A . n A 1 61 ALA 61 42 42 ALA ALA A . n A 1 62 ALA 62 43 43 ALA ALA A . n A 1 63 PRO 63 44 44 PRO PRO A . n A 1 64 HIS 64 45 45 HIS HIS A . n A 1 65 PRO 65 46 46 PRO PRO A . n A 1 66 PHE 66 47 47 PHE PHE A . n A 1 67 LEU 67 48 48 LEU LEU A . n A 1 68 HIS 68 49 49 HIS HIS A . n A 1 69 ARG 69 50 50 ARG ARG A . n A 1 70 TYR 70 51 51 TYR TYR A . n A 1 71 TYR 71 52 52 TYR TYR A . n A 1 72 GLN 72 53 53 GLN GLN A . n A 1 73 ARG 73 54 54 ARG ARG A . n A 1 74 GLN 74 55 55 GLN GLN A . n A 1 75 LEU 75 56 56 LEU LEU A . n A 1 76 SER 76 57 57 SER SER A . n A 1 77 SER 77 58 58 SER SER A . n A 1 78 THR 78 59 59 THR THR A . n A 1 79 TYR 79 60 60 TYR TYR A . n A 1 80 ARG 80 61 61 ARG ARG A . n A 1 81 ASP 81 62 62 ASP ASP A . n A 1 82 LEU 82 63 63 LEU LEU A . n A 1 83 ARG 83 64 64 ARG ARG A . n A 1 84 LYS 84 65 65 LYS LYS A . n A 1 85 GLY 85 66 66 GLY GLY A . n A 1 86 VAL 86 67 67 VAL VAL A . n A 1 87 TYR 87 68 68 TYR TYR A . n A 1 88 VAL 88 69 69 VAL VAL A . n A 1 89 PRO 89 70 70 PRO PRO A . n A 1 90 TYR 90 71 71 TYR TYR A . n A 1 91 THR 91 72 72 THR THR A . n A 1 92 GLN 92 73 73 GLN GLN A . n A 1 93 GLY 93 74 74 GLY GLY A . n A 1 94 LYS 94 75 75 LYS LYS A . n A 1 95 TRP 95 76 76 TRP TRP A . n A 1 96 GLU 96 77 77 GLU GLU A . n A 1 97 GLY 97 78 78 GLY GLY A . n A 1 98 GLU 98 79 79 GLU GLU A . n A 1 99 LEU 99 80 80 LEU LEU A . n A 1 100 GLY 100 81 81 GLY GLY A . n A 1 101 THR 101 82 82 THR THR A . n A 1 102 ASP 102 83 83 ASP ASP A . n A 1 103 LEU 103 84 84 LEU LEU A . n A 1 104 VAL 104 85 85 VAL VAL A . n A 1 105 SER 105 86 86 SER SER A . n A 1 106 ILE 106 87 87 ILE ILE A . n A 1 107 PRO 107 88 88 PRO PRO A . n A 1 108 HIS 108 89 89 HIS HIS A . n A 1 109 GLY 109 90 90 GLY GLY A . n A 1 110 PRO 110 91 91 PRO PRO A . n A 1 111 ASN 111 92 92 ASN ASN A . n A 1 112 VAL 112 93 93 VAL VAL A . n A 1 113 THR 113 94 94 THR THR A . n A 1 114 VAL 114 95 95 VAL VAL A . n A 1 115 ARG 115 96 96 ARG ARG A . n A 1 116 ALA 116 97 97 ALA ALA A . n A 1 117 ASN 117 98 98 ASN ASN A . n A 1 118 ILE 118 99 99 ILE ILE A . n A 1 119 ALA 119 100 100 ALA ALA A . n A 1 120 ALA 120 101 101 ALA ALA A . n A 1 121 ILE 121 102 102 ILE ILE A . n A 1 122 THR 122 103 103 THR THR A . n A 1 123 GLU 123 104 104 GLU GLU A . n A 1 124 SER 124 105 105 SER SER A . n A 1 125 ASP 125 106 106 ASP ASP A . n A 1 126 LYS 126 107 107 LYS LYS A . n A 1 127 PHE 127 108 108 PHE PHE A . n A 1 128 PHE 128 109 109 PHE PHE A . n A 1 129 ILE 129 110 110 ILE ILE A . n A 1 130 ASN 130 111 111 ASN ASN A . n A 1 131 GLY 131 112 112 GLY GLY A . n A 1 132 SER 132 113 113 SER SER A . n A 1 133 ASN 133 114 114 ASN ASN A . n A 1 134 TRP 134 115 115 TRP TRP A . n A 1 135 GLU 135 116 116 GLU GLU A . n A 1 136 GLY 136 117 117 GLY GLY A . n A 1 137 ILE 137 118 118 ILE ILE A . n A 1 138 LEU 138 119 119 LEU LEU A . n A 1 139 GLY 139 120 120 GLY GLY A . n A 1 140 LEU 140 121 121 LEU LEU A . n A 1 141 ALA 141 122 122 ALA ALA A . n A 1 142 TYR 142 123 123 TYR TYR A . n A 1 143 ALA 143 124 124 ALA ALA A . n A 1 144 GLU 144 125 125 GLU GLU A . n A 1 145 ILE 145 126 126 ILE ILE A . n A 1 146 ALA 146 127 127 ALA ALA A . n A 1 147 ARG 147 128 128 ARG ARG A . n A 1 148 PRO 148 129 129 PRO PRO A . n A 1 149 ASP 149 130 130 ASP ASP A . n A 1 150 ASP 150 131 131 ASP ASP A . n A 1 151 SER 151 132 132 SER SER A . n A 1 152 LEU 152 133 133 LEU LEU A . n A 1 153 GLU 153 134 134 GLU GLU A . n A 1 154 PRO 154 135 135 PRO PRO A . n A 1 155 PHE 155 136 136 PHE PHE A . n A 1 156 PHE 156 137 137 PHE PHE A . n A 1 157 ASP 157 138 138 ASP ASP A . n A 1 158 SER 158 139 139 SER SER A . n A 1 159 LEU 159 140 140 LEU LEU A . n A 1 160 VAL 160 141 141 VAL VAL A . n A 1 161 LYS 161 142 142 LYS LYS A . n A 1 162 GLN 162 143 143 GLN GLN A . n A 1 163 THR 163 144 144 THR THR A . n A 1 164 HIS 164 145 145 HIS HIS A . n A 1 165 VAL 165 146 146 VAL VAL A . n A 1 166 PRO 166 147 147 PRO PRO A . n A 1 167 ASN 167 148 148 ASN ASN A . n A 1 168 LEU 168 149 149 LEU LEU A . n A 1 169 PHE 169 150 150 PHE PHE A . n A 1 170 SER 170 151 151 SER SER A . n A 1 171 LEU 171 152 152 LEU LEU A . n A 1 172 GLN 172 153 153 GLN GLN A . n A 1 173 LEU 173 154 154 LEU LEU A . n A 1 174 CYS 174 155 155 CYS CYS A . n A 1 175 GLY 175 156 156 GLY GLY A . n A 1 176 ALA 176 157 ? ? ? A . n A 1 177 GLY 177 158 ? ? ? A . n A 1 178 PHE 178 159 ? ? ? A . n A 1 179 PRO 179 160 ? ? ? A . n A 1 180 LEU 180 161 ? ? ? A . n A 1 181 ASN 181 162 ? ? ? A . n A 1 182 GLN 182 163 ? ? ? A . n A 1 183 SER 183 164 ? ? ? A . n A 1 184 GLU 184 165 ? ? ? A . n A 1 185 VAL 185 166 ? ? ? A . n A 1 186 LEU 186 167 ? ? ? A . n A 1 187 ALA 187 168 168 ALA ALA A . n A 1 188 SER 188 169 169 SER SER A . n A 1 189 VAL 189 170 170 VAL VAL A . n A 1 190 GLY 190 171 171 GLY GLY A . n A 1 191 GLY 191 172 172 GLY GLY A . n A 1 192 SER 192 173 173 SER SER A . n A 1 193 MET 193 174 174 MET MET A . n A 1 194 ILE 194 175 175 ILE ILE A . n A 1 195 ILE 195 176 176 ILE ILE A . n A 1 196 GLY 196 177 177 GLY GLY A . n A 1 197 GLY 197 178 178 GLY GLY A . n A 1 198 ILE 198 179 179 ILE ILE A . n A 1 199 ASP 199 180 180 ASP ASP A . n A 1 200 HIS 200 181 181 HIS HIS A . n A 1 201 SER 201 182 182 SER SER A . n A 1 202 LEU 202 183 183 LEU LEU A . n A 1 203 TYR 203 184 184 TYR TYR A . n A 1 204 THR 204 185 185 THR THR A . n A 1 205 GLY 205 186 186 GLY GLY A . n A 1 206 SER 206 187 187 SER SER A . n A 1 207 LEU 207 188 188 LEU LEU A . n A 1 208 TRP 208 189 189 TRP TRP A . n A 1 209 TYR 209 190 190 TYR TYR A . n A 1 210 THR 210 191 191 THR THR A . n A 1 211 PRO 211 192 192 PRO PRO A . n A 1 212 ILE 212 193 193 ILE ILE A . n A 1 213 ARG 213 194 194 ARG ARG A . n A 1 214 ARG 214 195 195 ARG ARG A . n A 1 215 GLU 215 196 196 GLU GLU A . n A 1 216 TRP 216 197 197 TRP TRP A . n A 1 217 TYR 217 198 198 TYR TYR A . n A 1 218 TYR 218 199 199 TYR TYR A . n A 1 219 GLU 219 200 200 GLU GLU A . n A 1 220 VAL 220 201 201 VAL VAL A . n A 1 221 ILE 221 202 202 ILE ILE A . n A 1 222 ILE 222 203 203 ILE ILE A . n A 1 223 VAL 223 204 204 VAL VAL A . n A 1 224 ARG 224 205 205 ARG ARG A . n A 1 225 VAL 225 206 206 VAL VAL A . n A 1 226 GLU 226 207 207 GLU GLU A . n A 1 227 ILE 227 208 208 ILE ILE A . n A 1 228 ASN 228 209 209 ASN ASN A . n A 1 229 GLY 229 210 210 GLY GLY A . n A 1 230 GLN 230 211 211 GLN GLN A . n A 1 231 ASP 231 212 212 ASP ASP A . n A 1 232 LEU 232 213 213 LEU LEU A . n A 1 233 LYS 233 214 214 LYS LYS A . n A 1 234 MET 234 215 215 MET MET A . n A 1 235 ASP 235 216 216 ASP ASP A . n A 1 236 CYS 236 217 217 CYS CYS A . n A 1 237 LYS 237 218 218 LYS LYS A . n A 1 238 GLU 238 219 219 GLU GLU A . n A 1 239 TYR 239 220 220 TYR TYR A . n A 1 240 ASN 240 221 221 ASN ASN A . n A 1 241 TYR 241 222 222 TYR TYR A . n A 1 242 ASP 242 223 223 ASP ASP A . n A 1 243 LYS 243 224 224 LYS LYS A . n A 1 244 SER 244 225 225 SER SER A . n A 1 245 ILE 245 226 226 ILE ILE A . n A 1 246 VAL 246 227 227 VAL VAL A . n A 1 247 ASP 247 228 228 ASP ASP A . n A 1 248 SER 248 229 229 SER SER A . n A 1 249 GLY 249 230 230 GLY GLY A . n A 1 250 THR 250 231 231 THR THR A . n A 1 251 THR 251 232 232 THR THR A . n A 1 252 ASN 252 233 233 ASN ASN A . n A 1 253 LEU 253 234 234 LEU LEU A . n A 1 254 ARG 254 235 235 ARG ARG A . n A 1 255 LEU 255 236 236 LEU LEU A . n A 1 256 PRO 256 237 237 PRO PRO A . n A 1 257 LYS 257 238 238 LYS LYS A . n A 1 258 LYS 258 239 239 LYS LYS A . n A 1 259 VAL 259 240 240 VAL VAL A . n A 1 260 PHE 260 241 241 PHE PHE A . n A 1 261 GLU 261 242 242 GLU GLU A . n A 1 262 ALA 262 243 243 ALA ALA A . n A 1 263 ALA 263 244 244 ALA ALA A . n A 1 264 VAL 264 245 245 VAL VAL A . n A 1 265 LYS 265 246 246 LYS LYS A . n A 1 266 SER 266 247 247 SER SER A . n A 1 267 ILE 267 248 248 ILE ILE A . n A 1 268 LYS 268 249 249 LYS LYS A . n A 1 269 ALA 269 250 250 ALA ALA A . n A 1 270 ALA 270 251 251 ALA ALA A . n A 1 271 SER 271 252 252 SER SER A . n A 1 272 SER 272 253 253 SER SER A . n A 1 273 THR 273 254 254 THR THR A . n A 1 274 GLU 274 255 255 GLU GLU A . n A 1 275 LYS 275 256 256 LYS LYS A . n A 1 276 PHE 276 257 257 PHE PHE A . n A 1 277 PRO 277 258 258 PRO PRO A . n A 1 278 ASP 278 259 259 ASP ASP A . n A 1 279 GLY 279 260 260 GLY GLY A . n A 1 280 PHE 280 261 261 PHE PHE A . n A 1 281 TRP 281 262 262 TRP TRP A . n A 1 282 LEU 282 263 263 LEU LEU A . n A 1 283 GLY 283 264 264 GLY GLY A . n A 1 284 GLU 284 265 265 GLU GLU A . n A 1 285 GLN 285 266 266 GLN GLN A . n A 1 286 LEU 286 267 267 LEU LEU A . n A 1 287 VAL 287 268 268 VAL VAL A . n A 1 288 CYS 288 269 269 CYS CYS A . n A 1 289 TRP 289 270 270 TRP TRP A . n A 1 290 GLN 290 271 271 GLN GLN A . n A 1 291 ALA 291 272 272 ALA ALA A . n A 1 292 GLY 292 273 273 GLY GLY A . n A 1 293 THR 293 274 274 THR THR A . n A 1 294 THR 294 275 275 THR THR A . n A 1 295 PRO 295 276 276 PRO PRO A . n A 1 296 TRP 296 277 277 TRP TRP A . n A 1 297 ASN 297 278 278 ASN ASN A . n A 1 298 ILE 298 279 279 ILE ILE A . n A 1 299 PHE 299 280 280 PHE PHE A . n A 1 300 PRO 300 281 281 PRO PRO A . n A 1 301 VAL 301 282 282 VAL VAL A . n A 1 302 ILE 302 283 283 ILE ILE A . n A 1 303 SER 303 284 284 SER SER A . n A 1 304 LEU 304 285 285 LEU LEU A . n A 1 305 TYR 305 286 286 TYR TYR A . n A 1 306 LEU 306 287 287 LEU LEU A . n A 1 307 MET 307 288 288 MET MET A . n A 1 308 GLY 308 289 289 GLY GLY A . n A 1 309 GLU 309 290 290 GLU GLU A . n A 1 310 VAL 310 291 291 VAL VAL A . n A 1 311 THR 311 292 292 THR THR A . n A 1 312 ASN 312 293 293 ASN ASN A . n A 1 313 GLN 313 294 294 GLN GLN A . n A 1 314 SER 314 295 295 SER SER A . n A 1 315 PHE 315 296 296 PHE PHE A . n A 1 316 ARG 316 297 297 ARG ARG A . n A 1 317 ILE 317 298 298 ILE ILE A . n A 1 318 THR 318 299 299 THR THR A . n A 1 319 ILE 319 300 300 ILE ILE A . n A 1 320 LEU 320 301 301 LEU LEU A . n A 1 321 PRO 321 302 302 PRO PRO A . n A 1 322 GLN 322 303 303 GLN GLN A . n A 1 323 GLN 323 304 304 GLN GLN A . n A 1 324 TYR 324 305 305 TYR TYR A . n A 1 325 LEU 325 306 306 LEU LEU A . n A 1 326 ARG 326 307 307 ARG ARG A . n A 1 327 PRO 327 308 308 PRO PRO A . n A 1 328 VAL 328 309 309 VAL VAL A . n A 1 329 GLU 329 310 310 GLU GLU A . n A 1 330 ASP 330 311 ? ? ? A . n A 1 331 VAL 331 312 ? ? ? A . n A 1 332 ALA 332 313 ? ? ? A . n A 1 333 THR 333 314 ? ? ? A . n A 1 334 SER 334 315 ? ? ? A . n A 1 335 GLN 335 316 ? ? ? A . n A 1 336 ASP 336 317 ? ? ? A . n A 1 337 ASP 337 318 318 ASP ASP A . n A 1 338 CYS 338 319 319 CYS CYS A . n A 1 339 TYR 339 320 320 TYR TYR A . n A 1 340 LYS 340 321 321 LYS LYS A . n A 1 341 PHE 341 322 322 PHE PHE A . n A 1 342 ALA 342 323 323 ALA ALA A . n A 1 343 ILE 343 324 324 ILE ILE A . n A 1 344 SER 344 325 325 SER SER A . n A 1 345 GLN 345 326 326 GLN GLN A . n A 1 346 SER 346 327 327 SER SER A . n A 1 347 SER 347 328 328 SER SER A . n A 1 348 THR 348 329 329 THR THR A . n A 1 349 GLY 349 330 330 GLY GLY A . n A 1 350 THR 350 331 331 THR THR A . n A 1 351 VAL 351 332 332 VAL VAL A . n A 1 352 MET 352 333 333 MET MET A . n A 1 353 GLY 353 334 334 GLY GLY A . n A 1 354 ALA 354 335 335 ALA ALA A . n A 1 355 VAL 355 336 336 VAL VAL A . n A 1 356 ILE 356 337 337 ILE ILE A . n A 1 357 MET 357 338 338 MET MET A . n A 1 358 GLU 358 339 339 GLU GLU A . n A 1 359 GLY 359 340 340 GLY GLY A . n A 1 360 PHE 360 341 341 PHE PHE A . n A 1 361 TYR 361 342 342 TYR TYR A . n A 1 362 VAL 362 343 343 VAL VAL A . n A 1 363 VAL 363 344 344 VAL VAL A . n A 1 364 PHE 364 345 345 PHE PHE A . n A 1 365 ASP 365 346 346 ASP ASP A . n A 1 366 ARG 366 347 347 ARG ARG A . n A 1 367 ALA 367 348 348 ALA ALA A . n A 1 368 ARG 368 349 349 ARG ARG A . n A 1 369 LYS 369 350 350 LYS LYS A . n A 1 370 ARG 370 351 351 ARG ARG A . n A 1 371 ILE 371 352 352 ILE ILE A . n A 1 372 GLY 372 353 353 GLY GLY A . n A 1 373 PHE 373 354 354 PHE PHE A . n A 1 374 ALA 374 355 355 ALA ALA A . n A 1 375 VAL 375 356 356 VAL VAL A . n A 1 376 SER 376 357 357 SER SER A . n A 1 377 ALA 377 358 358 ALA ALA A . n A 1 378 CYS 378 359 359 CYS CYS A . n A 1 379 HIS 379 360 360 HIS HIS A . n A 1 380 VAL 380 361 361 VAL VAL A . n A 1 381 HIS 381 362 362 HIS HIS A . n A 1 382 ASP 382 363 363 ASP ASP A . n A 1 383 GLU 383 364 364 GLU GLU A . n A 1 384 PHE 384 365 365 PHE PHE A . n A 1 385 ARG 385 366 366 ARG ARG A . n A 1 386 THR 386 367 367 THR THR A . n A 1 387 ALA 387 368 368 ALA ALA A . n A 1 388 ALA 388 369 369 ALA ALA A . n A 1 389 VAL 389 370 370 VAL VAL A . n A 1 390 GLU 390 371 371 GLU GLU A . n A 1 391 GLY 391 372 372 GLY GLY A . n A 1 392 PRO 392 373 373 PRO PRO A . n A 1 393 PHE 393 374 374 PHE PHE A . n A 1 394 VAL 394 375 375 VAL VAL A . n A 1 395 THR 395 376 376 THR THR A . n A 1 396 LEU 396 377 377 LEU LEU A . n A 1 397 ASP 397 378 378 ASP ASP A . n A 1 398 MET 398 379 379 MET MET A . n A 1 399 GLU 399 380 380 GLU GLU A . n A 1 400 ASP 400 381 381 ASP ASP A . n A 1 401 CYS 401 382 382 CYS CYS A . n A 1 402 GLY 402 383 383 GLY GLY A . n A 1 403 TYR 403 384 384 TYR TYR A . n A 1 404 ASN 404 385 385 ASN ASN A . n A 1 405 ILE 405 386 ? ? ? A . n A 1 406 PRO 406 387 ? ? ? A . n A 1 407 GLN 407 388 ? ? ? A . n A 1 408 THR 408 389 ? ? ? A . n A 1 409 ASP 409 390 ? ? ? A . n A 1 410 GLU 410 391 ? ? ? A . n A 1 411 SER 411 392 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2011-08-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 197 ? ? -134.31 -79.12 2 1 ARG A 205 ? ? -176.33 140.40 3 1 ASN A 209 ? ? 63.91 63.57 4 1 GLU A 255 ? ? 172.17 153.68 5 1 ALA A 272 ? ? -59.50 10.62 6 1 TRP A 277 ? ? 72.19 -53.16 7 1 ASP A 363 ? ? -76.25 -164.15 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU -18 ? A LEU 1 2 1 Y 1 A PRO -17 ? A PRO 2 3 1 Y 1 A ARG -16 ? A ARG 3 4 1 Y 1 A GLU -15 ? A GLU 4 5 1 Y 1 A THR -14 ? A THR 5 6 1 Y 1 A ASP -13 ? A ASP 6 7 1 Y 1 A GLU -12 ? A GLU 7 8 1 Y 1 A GLU -11 ? A GLU 8 9 1 Y 1 A PRO -10 ? A PRO 9 10 1 Y 1 A GLU -9 ? A GLU 10 11 1 Y 1 A GLU -8 ? A GLU 11 12 1 Y 1 A PRO -7 ? A PRO 12 13 1 Y 1 A GLY -6 ? A GLY 13 14 1 Y 1 A LYS -5 ? A LYS 14 15 1 Y 1 A LYS -4 ? A LYS 15 16 1 Y 1 A GLY -3 ? A GLY 16 17 1 Y 1 A SER -2 ? A SER 17 18 1 Y 1 A ALA 157 ? A ALA 176 19 1 Y 1 A GLY 158 ? A GLY 177 20 1 Y 1 A PHE 159 ? A PHE 178 21 1 Y 1 A PRO 160 ? A PRO 179 22 1 Y 1 A LEU 161 ? A LEU 180 23 1 Y 1 A ASN 162 ? A ASN 181 24 1 Y 1 A GLN 163 ? A GLN 182 25 1 Y 1 A SER 164 ? A SER 183 26 1 Y 1 A GLU 165 ? A GLU 184 27 1 Y 1 A VAL 166 ? A VAL 185 28 1 Y 1 A LEU 167 ? A LEU 186 29 1 Y 1 A ASP 311 ? A ASP 330 30 1 Y 1 A VAL 312 ? A VAL 331 31 1 Y 1 A ALA 313 ? A ALA 332 32 1 Y 1 A THR 314 ? A THR 333 33 1 Y 1 A SER 315 ? A SER 334 34 1 Y 1 A GLN 316 ? A GLN 335 35 1 Y 1 A ASP 317 ? A ASP 336 36 1 Y 1 A ILE 386 ? A ILE 405 37 1 Y 1 A PRO 387 ? A PRO 406 38 1 Y 1 A GLN 388 ? A GLN 407 39 1 Y 1 A THR 389 ? A THR 408 40 1 Y 1 A ASP 390 ? A ASP 409 41 1 Y 1 A GLU 391 ? A GLU 410 42 1 Y 1 A SER 392 ? A SER 411 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 GLYCEROL GOL 4 '3-(2-aminoquinolin-3-yl)-N-cyclohexyl-N-methylpropanamide' RTM 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD 1 1502 1502 IOD IOD A . C 2 IOD 1 1503 1503 IOD IOD A . D 2 IOD 1 1505 1505 IOD IOD A . E 3 GOL 1 393 1 GOL GOL A . F 3 GOL 1 394 2 GOL GOL A . G 4 RTM 1 395 1 RTM RTM A . H 5 HOH 1 396 1 HOH HOH A . H 5 HOH 2 397 2 HOH HOH A . H 5 HOH 3 398 3 HOH HOH A . H 5 HOH 4 399 4 HOH HOH A . H 5 HOH 5 400 5 HOH HOH A . H 5 HOH 6 401 6 HOH HOH A . H 5 HOH 7 402 7 HOH HOH A . H 5 HOH 8 403 8 HOH HOH A . H 5 HOH 9 404 10 HOH HOH A . H 5 HOH 10 405 11 HOH HOH A . H 5 HOH 11 406 12 HOH HOH A . H 5 HOH 12 407 14 HOH HOH A . H 5 HOH 13 408 15 HOH HOH A . H 5 HOH 14 409 16 HOH HOH A . H 5 HOH 15 410 17 HOH HOH A . H 5 HOH 16 411 18 HOH HOH A . H 5 HOH 17 412 19 HOH HOH A . H 5 HOH 18 413 20 HOH HOH A . H 5 HOH 19 414 21 HOH HOH A . H 5 HOH 20 415 22 HOH HOH A . H 5 HOH 21 416 23 HOH HOH A . H 5 HOH 22 417 24 HOH HOH A . H 5 HOH 23 418 25 HOH HOH A . H 5 HOH 24 419 26 HOH HOH A . H 5 HOH 25 420 27 HOH HOH A . H 5 HOH 26 421 28 HOH HOH A . H 5 HOH 27 422 29 HOH HOH A . H 5 HOH 28 423 30 HOH HOH A . H 5 HOH 29 424 31 HOH HOH A . H 5 HOH 30 425 32 HOH HOH A . H 5 HOH 31 426 33 HOH HOH A . H 5 HOH 32 427 34 HOH HOH A . H 5 HOH 33 428 35 HOH HOH A . H 5 HOH 34 429 36 HOH HOH A . H 5 HOH 35 430 37 HOH HOH A . H 5 HOH 36 431 38 HOH HOH A . H 5 HOH 37 432 39 HOH HOH A . H 5 HOH 38 433 40 HOH HOH A . H 5 HOH 39 434 41 HOH HOH A . H 5 HOH 40 435 42 HOH HOH A . H 5 HOH 41 436 43 HOH HOH A . H 5 HOH 42 437 44 HOH HOH A . H 5 HOH 43 438 45 HOH HOH A . H 5 HOH 44 439 47 HOH HOH A . H 5 HOH 45 440 48 HOH HOH A . H 5 HOH 46 441 49 HOH HOH A . H 5 HOH 47 442 50 HOH HOH A . H 5 HOH 48 443 51 HOH HOH A . H 5 HOH 49 444 52 HOH HOH A . H 5 HOH 50 445 53 HOH HOH A . H 5 HOH 51 446 54 HOH HOH A . H 5 HOH 52 447 55 HOH HOH A . H 5 HOH 53 448 56 HOH HOH A . H 5 HOH 54 449 57 HOH HOH A . #