data_3S12 # _entry.id 3S12 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3S12 pdb_00003s12 10.2210/pdb3s12/pdb RCSB RCSB065626 ? ? WWPDB D_1000065626 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-12-14 2 'Structure model' 1 1 2012-03-28 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2024-11-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' struct_asym 14 3 'Structure model' struct_conn 15 3 'Structure model' struct_ref_seq_dif 16 3 'Structure model' struct_site 17 3 'Structure model' struct_site_gen 18 4 'Structure model' chem_comp 19 4 'Structure model' chem_comp_atom 20 4 'Structure model' chem_comp_bond 21 4 'Structure model' database_2 22 4 'Structure model' pdbx_entry_details 23 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.name' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_pdbx_entity_nonpoly.entity_id' 17 3 'Structure model' '_pdbx_entity_nonpoly.name' 18 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 19 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 3 'Structure model' '_struct_conn.pdbx_role' 21 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 3 'Structure model' '_struct_ref_seq_dif.details' 28 4 'Structure model' '_chem_comp.pdbx_synonyms' 29 4 'Structure model' '_database_2.pdbx_DOI' 30 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 3S12 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-14 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3S11 . unspecified PDB 3S13 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'DuBois, R.M.' 1 'Zaraket, H.' 2 'Reddivari, M.' 3 'Heath, R.J.' 4 'White, S.W.' 5 'Russell, C.J.' 6 # _citation.id primary _citation.title 'Acid stability of the hemagglutinin protein regulates H5N1 influenza virus pathogenicity.' _citation.journal_abbrev 'Plos Pathog.' _citation.journal_volume 7 _citation.page_first e1002398 _citation.page_last e1002398 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7366 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22144894 _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1002398 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'DuBois, R.M.' 1 ? primary 'Zaraket, H.' 2 ? primary 'Reddivari, M.' 3 ? primary 'Heath, R.J.' 4 ? primary 'White, S.W.' 5 ? primary 'Russell, C.J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hemagglutinin HA1 chain' 37782.715 1 ? ? ? ? 2 polymer man 'Hemagglutinin HA2 chain' 20937.143 1 ? ? ? ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 6 water nat water 18.015 16 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DLGSMADPGYLLEDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMC DEFINVPEWSYIVEKASPANDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYLGKSSFFRNV VWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRME FFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVK SNRLVLATGLRNTPQR ; ;DLGSMADPGYLLEDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMC DEFINVPEWSYIVEKASPANDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYLGKSSFFRNV VWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRME FFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVK SNRLVLATGLRNTPQR ; A ? 2 'polypeptide(L)' no no ;GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYP QYSEEARLNREEISGVRSLVPR ; ;GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYP QYSEEARLNREEISGVRSLVPR ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 LEU n 1 3 GLY n 1 4 SER n 1 5 MET n 1 6 ALA n 1 7 ASP n 1 8 PRO n 1 9 GLY n 1 10 TYR n 1 11 LEU n 1 12 LEU n 1 13 GLU n 1 14 ASP n 1 15 GLN n 1 16 ILE n 1 17 CYS n 1 18 ILE n 1 19 GLY n 1 20 TYR n 1 21 HIS n 1 22 ALA n 1 23 ASN n 1 24 ASN n 1 25 SER n 1 26 THR n 1 27 GLU n 1 28 GLN n 1 29 VAL n 1 30 ASP n 1 31 THR n 1 32 ILE n 1 33 MET n 1 34 GLU n 1 35 LYS n 1 36 ASN n 1 37 VAL n 1 38 THR n 1 39 VAL n 1 40 THR n 1 41 HIS n 1 42 ALA n 1 43 GLN n 1 44 ASP n 1 45 ILE n 1 46 LEU n 1 47 GLU n 1 48 LYS n 1 49 THR n 1 50 HIS n 1 51 ASN n 1 52 GLY n 1 53 LYS n 1 54 LEU n 1 55 CYS n 1 56 ASP n 1 57 LEU n 1 58 ASP n 1 59 GLY n 1 60 VAL n 1 61 LYS n 1 62 PRO n 1 63 LEU n 1 64 ILE n 1 65 LEU n 1 66 ARG n 1 67 ASP n 1 68 CYS n 1 69 SER n 1 70 VAL n 1 71 ALA n 1 72 GLY n 1 73 TRP n 1 74 LEU n 1 75 LEU n 1 76 GLY n 1 77 ASN n 1 78 PRO n 1 79 MET n 1 80 CYS n 1 81 ASP n 1 82 GLU n 1 83 PHE n 1 84 ILE n 1 85 ASN n 1 86 VAL n 1 87 PRO n 1 88 GLU n 1 89 TRP n 1 90 SER n 1 91 TYR n 1 92 ILE n 1 93 VAL n 1 94 GLU n 1 95 LYS n 1 96 ALA n 1 97 SER n 1 98 PRO n 1 99 ALA n 1 100 ASN n 1 101 ASP n 1 102 LEU n 1 103 CYS n 1 104 TYR n 1 105 PRO n 1 106 GLY n 1 107 ASP n 1 108 PHE n 1 109 ASN n 1 110 ASP n 1 111 TYR n 1 112 GLU n 1 113 GLU n 1 114 LEU n 1 115 LYS n 1 116 HIS n 1 117 LEU n 1 118 LEU n 1 119 SER n 1 120 ARG n 1 121 ILE n 1 122 ASN n 1 123 HIS n 1 124 PHE n 1 125 GLU n 1 126 LYS n 1 127 ILE n 1 128 GLN n 1 129 ILE n 1 130 ILE n 1 131 PRO n 1 132 LYS n 1 133 SER n 1 134 SER n 1 135 TRP n 1 136 SER n 1 137 ASN n 1 138 HIS n 1 139 GLU n 1 140 ALA n 1 141 SER n 1 142 SER n 1 143 GLY n 1 144 VAL n 1 145 SER n 1 146 SER n 1 147 ALA n 1 148 CYS n 1 149 PRO n 1 150 TYR n 1 151 LEU n 1 152 GLY n 1 153 LYS n 1 154 SER n 1 155 SER n 1 156 PHE n 1 157 PHE n 1 158 ARG n 1 159 ASN n 1 160 VAL n 1 161 VAL n 1 162 TRP n 1 163 LEU n 1 164 ILE n 1 165 LYS n 1 166 LYS n 1 167 ASN n 1 168 SER n 1 169 ALA n 1 170 TYR n 1 171 PRO n 1 172 THR n 1 173 ILE n 1 174 LYS n 1 175 ARG n 1 176 SER n 1 177 TYR n 1 178 ASN n 1 179 ASN n 1 180 THR n 1 181 ASN n 1 182 GLN n 1 183 GLU n 1 184 ASP n 1 185 LEU n 1 186 LEU n 1 187 VAL n 1 188 LEU n 1 189 TRP n 1 190 GLY n 1 191 ILE n 1 192 HIS n 1 193 HIS n 1 194 PRO n 1 195 ASN n 1 196 ASP n 1 197 ALA n 1 198 ALA n 1 199 GLU n 1 200 GLN n 1 201 THR n 1 202 LYS n 1 203 LEU n 1 204 TYR n 1 205 GLN n 1 206 ASN n 1 207 PRO n 1 208 THR n 1 209 THR n 1 210 TYR n 1 211 ILE n 1 212 SER n 1 213 VAL n 1 214 GLY n 1 215 THR n 1 216 SER n 1 217 THR n 1 218 LEU n 1 219 ASN n 1 220 GLN n 1 221 ARG n 1 222 LEU n 1 223 VAL n 1 224 PRO n 1 225 LYS n 1 226 ILE n 1 227 ALA n 1 228 THR n 1 229 ARG n 1 230 SER n 1 231 LYS n 1 232 VAL n 1 233 ASN n 1 234 GLY n 1 235 GLN n 1 236 SER n 1 237 GLY n 1 238 ARG n 1 239 MET n 1 240 GLU n 1 241 PHE n 1 242 PHE n 1 243 TRP n 1 244 THR n 1 245 ILE n 1 246 LEU n 1 247 LYS n 1 248 PRO n 1 249 ASN n 1 250 ASP n 1 251 ALA n 1 252 ILE n 1 253 ASN n 1 254 PHE n 1 255 GLU n 1 256 SER n 1 257 ASN n 1 258 GLY n 1 259 ASN n 1 260 PHE n 1 261 ILE n 1 262 ALA n 1 263 PRO n 1 264 GLU n 1 265 TYR n 1 266 ALA n 1 267 TYR n 1 268 LYS n 1 269 ILE n 1 270 VAL n 1 271 LYS n 1 272 LYS n 1 273 GLY n 1 274 ASP n 1 275 SER n 1 276 ALA n 1 277 ILE n 1 278 MET n 1 279 LYS n 1 280 SER n 1 281 GLU n 1 282 LEU n 1 283 GLU n 1 284 TYR n 1 285 GLY n 1 286 ASN n 1 287 CYS n 1 288 ASN n 1 289 THR n 1 290 LYS n 1 291 CYS n 1 292 GLN n 1 293 THR n 1 294 PRO n 1 295 MET n 1 296 GLY n 1 297 ALA n 1 298 ILE n 1 299 ASN n 1 300 SER n 1 301 SER n 1 302 MET n 1 303 PRO n 1 304 PHE n 1 305 HIS n 1 306 ASN n 1 307 ILE n 1 308 HIS n 1 309 PRO n 1 310 LEU n 1 311 THR n 1 312 ILE n 1 313 GLY n 1 314 GLU n 1 315 CYS n 1 316 PRO n 1 317 LYS n 1 318 TYR n 1 319 VAL n 1 320 LYS n 1 321 SER n 1 322 ASN n 1 323 ARG n 1 324 LEU n 1 325 VAL n 1 326 LEU n 1 327 ALA n 1 328 THR n 1 329 GLY n 1 330 LEU n 1 331 ARG n 1 332 ASN n 1 333 THR n 1 334 PRO n 1 335 GLN n 1 336 ARG n 2 1 GLY n 2 2 LEU n 2 3 PHE n 2 4 GLY n 2 5 ALA n 2 6 ILE n 2 7 ALA n 2 8 GLY n 2 9 PHE n 2 10 ILE n 2 11 GLU n 2 12 GLY n 2 13 GLY n 2 14 TRP n 2 15 GLN n 2 16 GLY n 2 17 MET n 2 18 VAL n 2 19 ASP n 2 20 GLY n 2 21 TRP n 2 22 TYR n 2 23 GLY n 2 24 TYR n 2 25 HIS n 2 26 HIS n 2 27 SER n 2 28 ASN n 2 29 GLU n 2 30 GLN n 2 31 GLY n 2 32 SER n 2 33 GLY n 2 34 TYR n 2 35 ALA n 2 36 ALA n 2 37 ASP n 2 38 LYS n 2 39 GLU n 2 40 SER n 2 41 THR n 2 42 GLN n 2 43 LYS n 2 44 ALA n 2 45 ILE n 2 46 ASP n 2 47 GLY n 2 48 VAL n 2 49 THR n 2 50 ASN n 2 51 LYS n 2 52 VAL n 2 53 ASN n 2 54 SER n 2 55 ILE n 2 56 ILE n 2 57 ASP n 2 58 LYS n 2 59 MET n 2 60 ASN n 2 61 THR n 2 62 GLN n 2 63 PHE n 2 64 GLU n 2 65 ALA n 2 66 VAL n 2 67 GLY n 2 68 ARG n 2 69 GLU n 2 70 PHE n 2 71 ASN n 2 72 ASN n 2 73 LEU n 2 74 GLU n 2 75 ARG n 2 76 ARG n 2 77 ILE n 2 78 GLU n 2 79 ASN n 2 80 LEU n 2 81 ASN n 2 82 LYS n 2 83 LYS n 2 84 MET n 2 85 GLU n 2 86 ASP n 2 87 GLY n 2 88 PHE n 2 89 LEU n 2 90 ASP n 2 91 VAL n 2 92 TRP n 2 93 THR n 2 94 TYR n 2 95 ASN n 2 96 ALA n 2 97 GLU n 2 98 LEU n 2 99 LEU n 2 100 VAL n 2 101 LEU n 2 102 MET n 2 103 GLU n 2 104 ASN n 2 105 GLU n 2 106 ARG n 2 107 THR n 2 108 LEU n 2 109 ASP n 2 110 PHE n 2 111 HIS n 2 112 ASP n 2 113 SER n 2 114 ASN n 2 115 VAL n 2 116 LYS n 2 117 ASN n 2 118 LEU n 2 119 TYR n 2 120 ASP n 2 121 LYS n 2 122 VAL n 2 123 ARG n 2 124 LEU n 2 125 GLN n 2 126 LEU n 2 127 ARG n 2 128 ASP n 2 129 ASN n 2 130 ALA n 2 131 LYS n 2 132 GLU n 2 133 LEU n 2 134 GLY n 2 135 ASN n 2 136 GLY n 2 137 CYS n 2 138 PHE n 2 139 GLU n 2 140 PHE n 2 141 TYR n 2 142 HIS n 2 143 LYS n 2 144 CYS n 2 145 ASP n 2 146 ASN n 2 147 GLU n 2 148 CYS n 2 149 MET n 2 150 GLU n 2 151 SER n 2 152 VAL n 2 153 LYS n 2 154 ASN n 2 155 GLY n 2 156 THR n 2 157 TYR n 2 158 ASP n 2 159 TYR n 2 160 PRO n 2 161 GLN n 2 162 TYR n 2 163 SER n 2 164 GLU n 2 165 GLU n 2 166 ALA n 2 167 ARG n 2 168 LEU n 2 169 ASN n 2 170 ARG n 2 171 GLU n 2 172 GLU n 2 173 ILE n 2 174 SER n 2 175 GLY n 2 176 VAL n 2 177 ARG n 2 178 SER n 2 179 LEU n 2 180 VAL n 2 181 PRO n 2 182 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? HA ? 'A/Chicken/Hong Kong/YU562/2001 (H5N1)' ? ? ? ? 'Influenza A virus' 196426 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? Sf9 ? ? ? ? ? ? ? baculovirus ? ? ? pAcGP67B ? ? 2 1 sample ? ? ? ? ? HA ? 'A/Chicken/Hong Kong/YU562/2001 (H5N1)' ? ? ? ? 'Influenza A virus' 196426 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? Sf9 ? ? ? ? ? ? ? baculovirus ? ? ? pAcGP67B ? ? # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 -2 ? ? ? A . n A 1 2 LEU 2 -1 ? ? ? A . n A 1 3 GLY 3 0 ? ? ? A . n A 1 4 SER 4 1 ? ? ? A . n A 1 5 MET 5 2 ? ? ? A . n A 1 6 ALA 6 3 ? ? ? A . n A 1 7 ASP 7 4 ? ? ? A . n A 1 8 PRO 8 5 ? ? ? A . n A 1 9 GLY 9 6 ? ? ? A . n A 1 10 TYR 10 7 ? ? ? A . n A 1 11 LEU 11 8 ? ? ? A . n A 1 12 LEU 12 9 ? ? ? A . n A 1 13 GLU 13 10 10 GLU GLU A . n A 1 14 ASP 14 11 11 ASP ASP A . n A 1 15 GLN 15 12 12 GLN GLN A . n A 1 16 ILE 16 13 13 ILE ILE A . n A 1 17 CYS 17 14 14 CYS CYS A . n A 1 18 ILE 18 15 15 ILE ILE A . n A 1 19 GLY 19 16 16 GLY GLY A . n A 1 20 TYR 20 17 17 TYR TYR A . n A 1 21 HIS 21 18 18 HIS HIS A . n A 1 22 ALA 22 19 19 ALA ALA A . n A 1 23 ASN 23 19 19 ASN ASN A A n A 1 24 ASN 24 20 20 ASN ASN A . n A 1 25 SER 25 21 21 SER SER A . n A 1 26 THR 26 22 22 THR THR A . n A 1 27 GLU 27 23 23 GLU GLU A . n A 1 28 GLN 28 24 24 GLN GLN A . n A 1 29 VAL 29 25 25 VAL VAL A . n A 1 30 ASP 30 26 26 ASP ASP A . n A 1 31 THR 31 27 27 THR THR A . n A 1 32 ILE 32 28 28 ILE ILE A . n A 1 33 MET 33 31 31 MET MET A . n A 1 34 GLU 34 32 32 GLU GLU A . n A 1 35 LYS 35 33 33 LYS LYS A . n A 1 36 ASN 36 34 34 ASN ASN A . n A 1 37 VAL 37 35 35 VAL VAL A . n A 1 38 THR 38 35 35 THR THR A A n A 1 39 VAL 39 36 36 VAL VAL A . n A 1 40 THR 40 37 37 THR THR A . n A 1 41 HIS 41 38 38 HIS HIS A . n A 1 42 ALA 42 39 39 ALA ALA A . n A 1 43 GLN 43 40 40 GLN GLN A . n A 1 44 ASP 44 41 41 ASP ASP A . n A 1 45 ILE 45 42 42 ILE ILE A . n A 1 46 LEU 46 43 43 LEU LEU A . n A 1 47 GLU 47 44 44 GLU GLU A . n A 1 48 LYS 48 45 45 LYS LYS A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 HIS 50 47 47 HIS HIS A . n A 1 51 ASN 51 48 48 ASN ASN A . n A 1 52 GLY 52 49 49 GLY GLY A . n A 1 53 LYS 53 50 50 LYS LYS A . n A 1 54 LEU 54 51 51 LEU LEU A . n A 1 55 CYS 55 52 52 CYS CYS A . n A 1 56 ASP 56 53 53 ASP ASP A . n A 1 57 LEU 57 53 53 LEU LEU A A n A 1 58 ASP 58 54 54 ASP ASP A . n A 1 59 GLY 59 55 55 GLY GLY A . n A 1 60 VAL 60 56 56 VAL VAL A . n A 1 61 LYS 61 57 57 LYS LYS A . n A 1 62 PRO 62 58 58 PRO PRO A . n A 1 63 LEU 63 59 59 LEU LEU A . n A 1 64 ILE 64 60 60 ILE ILE A . n A 1 65 LEU 65 61 61 LEU LEU A . n A 1 66 ARG 66 62 62 ARG ARG A . n A 1 67 ASP 67 63 63 ASP ASP A . n A 1 68 CYS 68 64 64 CYS CYS A . n A 1 69 SER 69 65 65 SER SER A . n A 1 70 VAL 70 66 66 VAL VAL A . n A 1 71 ALA 71 67 67 ALA ALA A . n A 1 72 GLY 72 68 68 GLY GLY A . n A 1 73 TRP 73 69 69 TRP TRP A . n A 1 74 LEU 74 70 70 LEU LEU A . n A 1 75 LEU 75 71 71 LEU LEU A . n A 1 76 GLY 76 72 72 GLY GLY A . n A 1 77 ASN 77 73 73 ASN ASN A . n A 1 78 PRO 78 74 74 PRO PRO A . n A 1 79 MET 79 75 75 MET MET A . n A 1 80 CYS 80 76 76 CYS CYS A . n A 1 81 ASP 81 77 77 ASP ASP A . n A 1 82 GLU 82 78 ? ? ? A . n A 1 83 PHE 83 79 ? ? ? A . n A 1 84 ILE 84 80 ? ? ? A . n A 1 85 ASN 85 81 81 ASN ASN A . n A 1 86 VAL 86 82 82 VAL VAL A . n A 1 87 PRO 87 82 82 PRO PRO A A n A 1 88 GLU 88 83 83 GLU GLU A . n A 1 89 TRP 89 84 84 TRP TRP A . n A 1 90 SER 90 85 85 SER SER A . n A 1 91 TYR 91 86 86 TYR TYR A . n A 1 92 ILE 92 87 87 ILE ILE A . n A 1 93 VAL 93 88 88 VAL VAL A . n A 1 94 GLU 94 89 89 GLU GLU A . n A 1 95 LYS 95 90 90 LYS LYS A . n A 1 96 ALA 96 91 91 ALA ALA A . n A 1 97 SER 97 92 92 SER SER A . n A 1 98 PRO 98 93 93 PRO PRO A . n A 1 99 ALA 99 94 94 ALA ALA A . n A 1 100 ASN 100 95 95 ASN ASN A . n A 1 101 ASP 101 96 96 ASP ASP A . n A 1 102 LEU 102 96 96 LEU LEU A A n A 1 103 CYS 103 97 97 CYS CYS A . n A 1 104 TYR 104 98 98 TYR TYR A . n A 1 105 PRO 105 99 99 PRO PRO A . n A 1 106 GLY 106 100 100 GLY GLY A . n A 1 107 ASP 107 101 101 ASP ASP A . n A 1 108 PHE 108 102 102 PHE PHE A . n A 1 109 ASN 109 103 103 ASN ASN A . n A 1 110 ASP 110 104 104 ASP ASP A . n A 1 111 TYR 111 105 105 TYR TYR A . n A 1 112 GLU 112 106 106 GLU GLU A . n A 1 113 GLU 113 107 107 GLU GLU A . n A 1 114 LEU 114 108 108 LEU LEU A . n A 1 115 LYS 115 109 109 LYS LYS A . n A 1 116 HIS 116 110 110 HIS HIS A . n A 1 117 LEU 117 111 111 LEU LEU A . n A 1 118 LEU 118 112 112 LEU LEU A . n A 1 119 SER 119 113 113 SER SER A . n A 1 120 ARG 120 114 114 ARG ARG A . n A 1 121 ILE 121 115 115 ILE ILE A . n A 1 122 ASN 122 116 116 ASN ASN A . n A 1 123 HIS 123 117 117 HIS HIS A . n A 1 124 PHE 124 118 118 PHE PHE A . n A 1 125 GLU 125 119 119 GLU GLU A . n A 1 126 LYS 126 120 120 LYS LYS A . n A 1 127 ILE 127 121 121 ILE ILE A . n A 1 128 GLN 128 122 122 GLN GLN A . n A 1 129 ILE 129 123 123 ILE ILE A . n A 1 130 ILE 130 124 124 ILE ILE A . n A 1 131 PRO 131 125 125 PRO PRO A . n A 1 132 LYS 132 125 125 LYS LYS A A n A 1 133 SER 133 125 125 SER SER A B n A 1 134 SER 134 126 126 SER SER A . n A 1 135 TRP 135 127 127 TRP TRP A . n A 1 136 SER 136 128 128 SER SER A . n A 1 137 ASN 137 129 129 ASN ASN A . n A 1 138 HIS 138 130 130 HIS HIS A . n A 1 139 GLU 139 131 131 GLU GLU A . n A 1 140 ALA 140 132 132 ALA ALA A . n A 1 141 SER 141 133 133 SER SER A . n A 1 142 SER 142 133 133 SER SER A A n A 1 143 GLY 143 134 134 GLY GLY A . n A 1 144 VAL 144 135 135 VAL VAL A . n A 1 145 SER 145 136 136 SER SER A . n A 1 146 SER 146 137 137 SER SER A . n A 1 147 ALA 147 138 138 ALA ALA A . n A 1 148 CYS 148 139 139 CYS CYS A . n A 1 149 PRO 149 140 140 PRO PRO A . n A 1 150 TYR 150 141 141 TYR TYR A . n A 1 151 LEU 151 142 142 LEU LEU A . n A 1 152 GLY 152 143 143 GLY GLY A . n A 1 153 LYS 153 144 144 LYS LYS A . n A 1 154 SER 154 145 145 SER SER A . n A 1 155 SER 155 146 146 SER SER A . n A 1 156 PHE 156 147 147 PHE PHE A . n A 1 157 PHE 157 148 148 PHE PHE A . n A 1 158 ARG 158 149 149 ARG ARG A . n A 1 159 ASN 159 150 150 ASN ASN A . n A 1 160 VAL 160 151 151 VAL VAL A . n A 1 161 VAL 161 152 152 VAL VAL A . n A 1 162 TRP 162 153 153 TRP TRP A . n A 1 163 LEU 163 154 154 LEU LEU A . n A 1 164 ILE 164 155 155 ILE ILE A . n A 1 165 LYS 165 156 156 LYS LYS A . n A 1 166 LYS 166 157 157 LYS LYS A . n A 1 167 ASN 167 158 158 ASN ASN A . n A 1 168 SER 168 159 159 SER SER A . n A 1 169 ALA 169 160 160 ALA ALA A . n A 1 170 TYR 170 161 161 TYR TYR A . n A 1 171 PRO 171 162 162 PRO PRO A . n A 1 172 THR 172 163 163 THR THR A . n A 1 173 ILE 173 164 164 ILE ILE A . n A 1 174 LYS 174 165 165 LYS LYS A . n A 1 175 ARG 175 166 166 ARG ARG A . n A 1 176 SER 176 167 167 SER SER A . n A 1 177 TYR 177 168 168 TYR TYR A . n A 1 178 ASN 178 169 169 ASN ASN A . n A 1 179 ASN 179 170 170 ASN ASN A . n A 1 180 THR 180 171 171 THR THR A . n A 1 181 ASN 181 172 172 ASN ASN A . n A 1 182 GLN 182 173 173 GLN GLN A . n A 1 183 GLU 183 174 174 GLU GLU A . n A 1 184 ASP 184 175 175 ASP ASP A . n A 1 185 LEU 185 176 176 LEU LEU A . n A 1 186 LEU 186 177 177 LEU LEU A . n A 1 187 VAL 187 178 178 VAL VAL A . n A 1 188 LEU 188 179 179 LEU LEU A . n A 1 189 TRP 189 180 180 TRP TRP A . n A 1 190 GLY 190 181 181 GLY GLY A . n A 1 191 ILE 191 182 182 ILE ILE A . n A 1 192 HIS 192 183 183 HIS HIS A . n A 1 193 HIS 193 184 184 HIS HIS A . n A 1 194 PRO 194 185 185 PRO PRO A . n A 1 195 ASN 195 186 186 ASN ASN A . n A 1 196 ASP 196 187 187 ASP ASP A . n A 1 197 ALA 197 188 188 ALA ALA A . n A 1 198 ALA 198 189 189 ALA ALA A . n A 1 199 GLU 199 190 190 GLU GLU A . n A 1 200 GLN 200 191 191 GLN GLN A . n A 1 201 THR 201 192 192 THR THR A . n A 1 202 LYS 202 193 193 LYS LYS A . n A 1 203 LEU 203 194 194 LEU LEU A . n A 1 204 TYR 204 195 195 TYR TYR A . n A 1 205 GLN 205 196 196 GLN GLN A . n A 1 206 ASN 206 197 197 ASN ASN A . n A 1 207 PRO 207 198 198 PRO PRO A . n A 1 208 THR 208 199 199 THR THR A . n A 1 209 THR 209 200 200 THR THR A . n A 1 210 TYR 210 201 201 TYR TYR A . n A 1 211 ILE 211 202 202 ILE ILE A . n A 1 212 SER 212 203 203 SER SER A . n A 1 213 VAL 213 204 204 VAL VAL A . n A 1 214 GLY 214 205 205 GLY GLY A . n A 1 215 THR 215 206 206 THR THR A . n A 1 216 SER 216 207 207 SER SER A . n A 1 217 THR 217 208 208 THR THR A . n A 1 218 LEU 218 209 209 LEU LEU A . n A 1 219 ASN 219 210 210 ASN ASN A . n A 1 220 GLN 220 211 211 GLN GLN A . n A 1 221 ARG 221 212 212 ARG ARG A . n A 1 222 LEU 222 213 213 LEU LEU A . n A 1 223 VAL 223 214 214 VAL VAL A . n A 1 224 PRO 224 215 215 PRO PRO A . n A 1 225 LYS 225 216 216 LYS LYS A . n A 1 226 ILE 226 217 217 ILE ILE A . n A 1 227 ALA 227 218 218 ALA ALA A . n A 1 228 THR 228 219 219 THR THR A . n A 1 229 ARG 229 220 220 ARG ARG A . n A 1 230 SER 230 221 221 SER SER A . n A 1 231 LYS 231 222 222 LYS LYS A . n A 1 232 VAL 232 223 223 VAL VAL A . n A 1 233 ASN 233 224 224 ASN ASN A . n A 1 234 GLY 234 225 225 GLY GLY A . n A 1 235 GLN 235 226 226 GLN GLN A . n A 1 236 SER 236 227 227 SER SER A . n A 1 237 GLY 237 228 228 GLY GLY A . n A 1 238 ARG 238 229 229 ARG ARG A . n A 1 239 MET 239 230 230 MET MET A . n A 1 240 GLU 240 231 231 GLU GLU A . n A 1 241 PHE 241 232 232 PHE PHE A . n A 1 242 PHE 242 233 233 PHE PHE A . n A 1 243 TRP 243 234 234 TRP TRP A . n A 1 244 THR 244 235 235 THR THR A . n A 1 245 ILE 245 236 236 ILE ILE A . n A 1 246 LEU 246 237 237 LEU LEU A . n A 1 247 LYS 247 238 238 LYS LYS A . n A 1 248 PRO 248 239 239 PRO PRO A . n A 1 249 ASN 249 240 240 ASN ASN A . n A 1 250 ASP 250 241 241 ASP ASP A . n A 1 251 ALA 251 242 242 ALA ALA A . n A 1 252 ILE 252 243 243 ILE ILE A . n A 1 253 ASN 253 244 244 ASN ASN A . n A 1 254 PHE 254 245 245 PHE PHE A . n A 1 255 GLU 255 246 246 GLU GLU A . n A 1 256 SER 256 247 247 SER SER A . n A 1 257 ASN 257 248 248 ASN ASN A . n A 1 258 GLY 258 249 249 GLY GLY A . n A 1 259 ASN 259 250 250 ASN ASN A . n A 1 260 PHE 260 251 251 PHE PHE A . n A 1 261 ILE 261 252 252 ILE ILE A . n A 1 262 ALA 262 253 253 ALA ALA A . n A 1 263 PRO 263 254 254 PRO PRO A . n A 1 264 GLU 264 255 255 GLU GLU A . n A 1 265 TYR 265 256 256 TYR TYR A . n A 1 266 ALA 266 257 257 ALA ALA A . n A 1 267 TYR 267 258 258 TYR TYR A . n A 1 268 LYS 268 259 259 LYS LYS A . n A 1 269 ILE 269 260 260 ILE ILE A . n A 1 270 VAL 270 261 261 VAL VAL A . n A 1 271 LYS 271 262 262 LYS LYS A . n A 1 272 LYS 272 263 263 LYS LYS A . n A 1 273 GLY 273 264 264 GLY GLY A . n A 1 274 ASP 274 264 264 ASP ASP A A n A 1 275 SER 275 265 265 SER SER A . n A 1 276 ALA 276 266 266 ALA ALA A . n A 1 277 ILE 277 267 267 ILE ILE A . n A 1 278 MET 278 268 268 MET MET A . n A 1 279 LYS 279 269 269 LYS LYS A . n A 1 280 SER 280 270 270 SER SER A . n A 1 281 GLU 281 271 271 GLU GLU A . n A 1 282 LEU 282 272 272 LEU LEU A . n A 1 283 GLU 283 273 273 GLU GLU A . n A 1 284 TYR 284 274 274 TYR TYR A . n A 1 285 GLY 285 275 275 GLY GLY A . n A 1 286 ASN 286 276 276 ASN ASN A . n A 1 287 CYS 287 277 277 CYS CYS A . n A 1 288 ASN 288 278 278 ASN ASN A . n A 1 289 THR 289 279 279 THR THR A . n A 1 290 LYS 290 280 280 LYS LYS A . n A 1 291 CYS 291 281 281 CYS CYS A . n A 1 292 GLN 292 282 282 GLN GLN A . n A 1 293 THR 293 283 283 THR THR A . n A 1 294 PRO 294 284 284 PRO PRO A . n A 1 295 MET 295 285 285 MET MET A . n A 1 296 GLY 296 286 286 GLY GLY A . n A 1 297 ALA 297 287 287 ALA ALA A . n A 1 298 ILE 298 288 288 ILE ILE A . n A 1 299 ASN 299 289 289 ASN ASN A . n A 1 300 SER 300 290 290 SER SER A . n A 1 301 SER 301 291 291 SER SER A . n A 1 302 MET 302 292 292 MET MET A . n A 1 303 PRO 303 293 293 PRO PRO A . n A 1 304 PHE 304 294 294 PHE PHE A . n A 1 305 HIS 305 295 295 HIS HIS A . n A 1 306 ASN 306 296 296 ASN ASN A . n A 1 307 ILE 307 297 297 ILE ILE A . n A 1 308 HIS 308 298 298 HIS HIS A . n A 1 309 PRO 309 299 299 PRO PRO A . n A 1 310 LEU 310 300 300 LEU LEU A . n A 1 311 THR 311 301 301 THR THR A . n A 1 312 ILE 312 302 302 ILE ILE A . n A 1 313 GLY 313 303 303 GLY GLY A . n A 1 314 GLU 314 304 304 GLU GLU A . n A 1 315 CYS 315 305 305 CYS CYS A . n A 1 316 PRO 316 306 306 PRO PRO A . n A 1 317 LYS 317 307 307 LYS LYS A . n A 1 318 TYR 318 308 308 TYR TYR A . n A 1 319 VAL 319 309 309 VAL VAL A . n A 1 320 LYS 320 310 310 LYS LYS A . n A 1 321 SER 321 311 311 SER SER A . n A 1 322 ASN 322 312 312 ASN ASN A . n A 1 323 ARG 323 313 313 ARG ARG A . n A 1 324 LEU 324 314 314 LEU LEU A . n A 1 325 VAL 325 315 315 VAL VAL A . n A 1 326 LEU 326 316 316 LEU LEU A . n A 1 327 ALA 327 317 317 ALA ALA A . n A 1 328 THR 328 318 318 THR THR A . n A 1 329 GLY 329 319 319 GLY GLY A . n A 1 330 LEU 330 320 320 LEU LEU A . n A 1 331 ARG 331 321 321 ARG ARG A . n A 1 332 ASN 332 322 322 ASN ASN A . n A 1 333 THR 333 323 323 THR THR A . n A 1 334 PRO 334 324 ? ? ? A . n A 1 335 GLN 335 325 ? ? ? A . n A 1 336 ARG 336 326 ? ? ? A . n B 2 1 GLY 1 1 ? ? ? B . n B 2 2 LEU 2 2 ? ? ? B . n B 2 3 PHE 3 3 ? ? ? B . n B 2 4 GLY 4 4 ? ? ? B . n B 2 5 ALA 5 5 ? ? ? B . n B 2 6 ILE 6 6 ? ? ? B . n B 2 7 ALA 7 7 ? ? ? B . n B 2 8 GLY 8 8 ? ? ? B . n B 2 9 PHE 9 9 ? ? ? B . n B 2 10 ILE 10 10 10 ILE ILE B . n B 2 11 GLU 11 11 11 GLU GLU B . n B 2 12 GLY 12 12 12 GLY GLY B . n B 2 13 GLY 13 13 13 GLY GLY B . n B 2 14 TRP 14 14 14 TRP TRP B . n B 2 15 GLN 15 15 15 GLN GLN B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 MET 17 17 17 MET MET B . n B 2 18 VAL 18 18 18 VAL VAL B . n B 2 19 ASP 19 19 19 ASP ASP B . n B 2 20 GLY 20 20 20 GLY GLY B . n B 2 21 TRP 21 21 21 TRP TRP B . n B 2 22 TYR 22 22 22 TYR TYR B . n B 2 23 GLY 23 23 23 GLY GLY B . n B 2 24 TYR 24 24 24 TYR TYR B . n B 2 25 HIS 25 25 25 HIS HIS B . n B 2 26 HIS 26 26 26 HIS HIS B . n B 2 27 SER 27 27 27 SER SER B . n B 2 28 ASN 28 28 28 ASN ASN B . n B 2 29 GLU 29 29 29 GLU GLU B . n B 2 30 GLN 30 30 30 GLN GLN B . n B 2 31 GLY 31 31 31 GLY GLY B . n B 2 32 SER 32 32 32 SER SER B . n B 2 33 GLY 33 33 33 GLY GLY B . n B 2 34 TYR 34 34 34 TYR TYR B . n B 2 35 ALA 35 35 35 ALA ALA B . n B 2 36 ALA 36 36 36 ALA ALA B . n B 2 37 ASP 37 37 37 ASP ASP B . n B 2 38 LYS 38 38 38 LYS LYS B . n B 2 39 GLU 39 39 39 GLU GLU B . n B 2 40 SER 40 40 40 SER SER B . n B 2 41 THR 41 41 41 THR THR B . n B 2 42 GLN 42 42 42 GLN GLN B . n B 2 43 LYS 43 43 43 LYS LYS B . n B 2 44 ALA 44 44 44 ALA ALA B . n B 2 45 ILE 45 45 45 ILE ILE B . n B 2 46 ASP 46 46 46 ASP ASP B . n B 2 47 GLY 47 47 47 GLY GLY B . n B 2 48 VAL 48 48 48 VAL VAL B . n B 2 49 THR 49 49 49 THR THR B . n B 2 50 ASN 50 50 50 ASN ASN B . n B 2 51 LYS 51 51 51 LYS LYS B . n B 2 52 VAL 52 52 52 VAL VAL B . n B 2 53 ASN 53 53 53 ASN ASN B . n B 2 54 SER 54 54 54 SER SER B . n B 2 55 ILE 55 55 55 ILE ILE B . n B 2 56 ILE 56 56 56 ILE ILE B . n B 2 57 ASP 57 57 57 ASP ASP B . n B 2 58 LYS 58 58 58 LYS LYS B . n B 2 59 MET 59 59 59 MET MET B . n B 2 60 ASN 60 60 60 ASN ASN B . n B 2 61 THR 61 61 61 THR THR B . n B 2 62 GLN 62 62 62 GLN GLN B . n B 2 63 PHE 63 63 63 PHE PHE B . n B 2 64 GLU 64 64 64 GLU GLU B . n B 2 65 ALA 65 65 65 ALA ALA B . n B 2 66 VAL 66 66 66 VAL VAL B . n B 2 67 GLY 67 67 67 GLY GLY B . n B 2 68 ARG 68 68 68 ARG ARG B . n B 2 69 GLU 69 69 69 GLU GLU B . n B 2 70 PHE 70 70 70 PHE PHE B . n B 2 71 ASN 71 71 71 ASN ASN B . n B 2 72 ASN 72 72 72 ASN ASN B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 GLU 74 74 74 GLU GLU B . n B 2 75 ARG 75 75 75 ARG ARG B . n B 2 76 ARG 76 76 76 ARG ARG B . n B 2 77 ILE 77 77 77 ILE ILE B . n B 2 78 GLU 78 78 78 GLU GLU B . n B 2 79 ASN 79 79 79 ASN ASN B . n B 2 80 LEU 80 80 80 LEU LEU B . n B 2 81 ASN 81 81 81 ASN ASN B . n B 2 82 LYS 82 82 82 LYS LYS B . n B 2 83 LYS 83 83 83 LYS LYS B . n B 2 84 MET 84 84 84 MET MET B . n B 2 85 GLU 85 85 85 GLU GLU B . n B 2 86 ASP 86 86 86 ASP ASP B . n B 2 87 GLY 87 87 87 GLY GLY B . n B 2 88 PHE 88 88 88 PHE PHE B . n B 2 89 LEU 89 89 89 LEU LEU B . n B 2 90 ASP 90 90 90 ASP ASP B . n B 2 91 VAL 91 91 91 VAL VAL B . n B 2 92 TRP 92 92 92 TRP TRP B . n B 2 93 THR 93 93 93 THR THR B . n B 2 94 TYR 94 94 94 TYR TYR B . n B 2 95 ASN 95 95 95 ASN ASN B . n B 2 96 ALA 96 96 96 ALA ALA B . n B 2 97 GLU 97 97 97 GLU GLU B . n B 2 98 LEU 98 98 98 LEU LEU B . n B 2 99 LEU 99 99 99 LEU LEU B . n B 2 100 VAL 100 100 100 VAL VAL B . n B 2 101 LEU 101 101 101 LEU LEU B . n B 2 102 MET 102 102 102 MET MET B . n B 2 103 GLU 103 103 103 GLU GLU B . n B 2 104 ASN 104 104 104 ASN ASN B . n B 2 105 GLU 105 105 105 GLU GLU B . n B 2 106 ARG 106 106 106 ARG ARG B . n B 2 107 THR 107 107 107 THR THR B . n B 2 108 LEU 108 108 108 LEU LEU B . n B 2 109 ASP 109 109 109 ASP ASP B . n B 2 110 PHE 110 110 110 PHE PHE B . n B 2 111 HIS 111 111 111 HIS HIS B . n B 2 112 ASP 112 112 112 ASP ASP B . n B 2 113 SER 113 113 113 SER SER B . n B 2 114 ASN 114 114 114 ASN ASN B . n B 2 115 VAL 115 115 115 VAL VAL B . n B 2 116 LYS 116 116 116 LYS LYS B . n B 2 117 ASN 117 117 117 ASN ASN B . n B 2 118 LEU 118 118 118 LEU LEU B . n B 2 119 TYR 119 119 119 TYR TYR B . n B 2 120 ASP 120 120 120 ASP ASP B . n B 2 121 LYS 121 121 121 LYS LYS B . n B 2 122 VAL 122 122 122 VAL VAL B . n B 2 123 ARG 123 123 123 ARG ARG B . n B 2 124 LEU 124 124 124 LEU LEU B . n B 2 125 GLN 125 125 125 GLN GLN B . n B 2 126 LEU 126 126 126 LEU LEU B . n B 2 127 ARG 127 127 127 ARG ARG B . n B 2 128 ASP 128 128 128 ASP ASP B . n B 2 129 ASN 129 129 129 ASN ASN B . n B 2 130 ALA 130 130 130 ALA ALA B . n B 2 131 LYS 131 131 131 LYS LYS B . n B 2 132 GLU 132 132 132 GLU GLU B . n B 2 133 LEU 133 133 133 LEU LEU B . n B 2 134 GLY 134 134 134 GLY GLY B . n B 2 135 ASN 135 135 135 ASN ASN B . n B 2 136 GLY 136 136 136 GLY GLY B . n B 2 137 CYS 137 137 137 CYS CYS B . n B 2 138 PHE 138 138 138 PHE PHE B . n B 2 139 GLU 139 139 139 GLU GLU B . n B 2 140 PHE 140 140 140 PHE PHE B . n B 2 141 TYR 141 141 141 TYR TYR B . n B 2 142 HIS 142 142 142 HIS HIS B . n B 2 143 LYS 143 143 143 LYS LYS B . n B 2 144 CYS 144 144 144 CYS CYS B . n B 2 145 ASP 145 145 145 ASP ASP B . n B 2 146 ASN 146 146 146 ASN ASN B . n B 2 147 GLU 147 147 147 GLU GLU B . n B 2 148 CYS 148 148 148 CYS CYS B . n B 2 149 MET 149 149 149 MET MET B . n B 2 150 GLU 150 150 150 GLU GLU B . n B 2 151 SER 151 151 151 SER SER B . n B 2 152 VAL 152 152 152 VAL VAL B . n B 2 153 LYS 153 153 153 LYS LYS B . n B 2 154 ASN 154 154 154 ASN ASN B . n B 2 155 GLY 155 155 155 GLY GLY B . n B 2 156 THR 156 156 156 THR THR B . n B 2 157 TYR 157 157 157 TYR TYR B . n B 2 158 ASP 158 158 158 ASP ASP B . n B 2 159 TYR 159 159 159 TYR TYR B . n B 2 160 PRO 160 160 160 PRO PRO B . n B 2 161 GLN 161 161 161 GLN GLN B . n B 2 162 TYR 162 162 162 TYR TYR B . n B 2 163 SER 163 163 163 SER SER B . n B 2 164 GLU 164 164 164 GLU GLU B . n B 2 165 GLU 165 165 165 GLU GLU B . n B 2 166 ALA 166 166 166 ALA ALA B . n B 2 167 ARG 167 167 167 ARG ARG B . n B 2 168 LEU 168 168 ? ? ? B . n B 2 169 ASN 169 169 ? ? ? B . n B 2 170 ARG 170 170 ? ? ? B . n B 2 171 GLU 171 171 ? ? ? B . n B 2 172 GLU 172 172 ? ? ? B . n B 2 173 ILE 173 173 ? ? ? B . n B 2 174 SER 174 174 ? ? ? B . n B 2 175 GLY 175 175 ? ? ? B . n B 2 176 VAL 176 176 ? ? ? B . n B 2 177 ARG 177 177 ? ? ? B . n B 2 178 SER 178 178 ? ? ? B . n B 2 179 LEU 179 179 ? ? ? B . n B 2 180 VAL 180 180 ? ? ? B . n B 2 181 PRO 181 181 ? ? ? B . n B 2 182 ARG 182 182 ? ? ? B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 D NAG 2 n C 3 NAG 2 C NAG 2 D NAG 3 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 1 327 1 SO4 SO4 A . E 4 SO4 1 328 2 SO4 SO4 A . F 5 NAG 1 329 1 NAG NAG A . G 6 HOH 1 332 1 HOH HOH A . G 6 HOH 2 333 2 HOH HOH A . G 6 HOH 3 334 3 HOH HOH A . G 6 HOH 4 335 4 HOH HOH A . G 6 HOH 5 336 5 HOH HOH A . G 6 HOH 6 337 6 HOH HOH A . G 6 HOH 7 338 7 HOH HOH A . G 6 HOH 8 339 8 HOH HOH A . G 6 HOH 9 340 9 HOH HOH A . G 6 HOH 10 341 10 HOH HOH A . G 6 HOH 11 342 11 HOH HOH A . G 6 HOH 12 343 12 HOH HOH A . H 6 HOH 1 183 13 HOH HOH B . H 6 HOH 2 184 14 HOH HOH B . H 6 HOH 3 185 15 HOH HOH B . H 6 HOH 4 186 16 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 10 ? CB ? A GLU 13 CB 2 1 Y 1 A GLU 10 ? CG ? A GLU 13 CG 3 1 Y 1 A GLU 10 ? CD ? A GLU 13 CD 4 1 Y 1 A GLU 10 ? OE1 ? A GLU 13 OE1 5 1 Y 1 A GLU 10 ? OE2 ? A GLU 13 OE2 6 1 Y 1 B GLN 161 ? CG ? B GLN 161 CG 7 1 Y 1 B GLN 161 ? CD ? B GLN 161 CD 8 1 Y 1 B GLN 161 ? OE1 ? B GLN 161 OE1 9 1 Y 1 B GLN 161 ? NE2 ? B GLN 161 NE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHASER 2.1.4 'Wed Oct 28 14:30:30 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? # _cell.entry_id 3S12 _cell.length_a 112.552 _cell.length_b 112.552 _cell.length_c 134.689 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S12 _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3S12 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.19 _exptl_crystal.density_percent_sol 70.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.62M ammonium sulfate, 0.1M sodium cacodylate pH 6.6, VAPOR DIFFUSION, HANGING DROP, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD' _diffrn_detector.pdbx_collection_date 2010-08-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3S12 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 3.100 _reflns.number_obs 18334 _reflns.number_all ? _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs 0.151 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.100 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.000 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 3.100 3.210 100.000 0.459 ? ? 9.800 ? ? ? ? ? ? 1 2 3.210 3.340 100.000 0.372 ? ? 10.900 ? ? ? ? ? ? 1 3 3.340 3.490 100.000 0.287 ? ? 11.200 ? ? ? ? ? ? 1 4 3.490 3.680 100.000 0.214 ? ? 11.300 ? ? ? ? ? ? 1 5 3.680 3.910 100.000 0.168 ? ? 11.300 ? ? ? ? ? ? 1 6 3.910 4.210 100.000 0.130 ? ? 11.300 ? ? ? ? ? ? 1 7 4.210 4.630 100.000 0.108 ? ? 11.200 ? ? ? ? ? ? 1 8 4.630 5.300 100.000 0.106 ? ? 11.200 ? ? ? ? ? ? 1 9 5.300 6.670 100.000 0.115 ? ? 11.000 ? ? ? ? ? ? 1 10 6.670 50.000 99.400 0.055 ? ? 10.400 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3S12 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17391 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 134.69 _refine.ls_d_res_high 3.10 _refine.ls_percent_reflns_obs 99.69 _refine.ls_R_factor_obs 0.21949 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21714 _refine.ls_R_factor_R_free 0.26443 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 940 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.896 _refine.correlation_coeff_Fo_to_Fc_free 0.858 _refine.B_iso_mean 37.214 _refine.aniso_B[1][1] 2.64 _refine.aniso_B[2][2] 2.64 _refine.aniso_B[3][3] -3.95 _refine.aniso_B[1][2] 1.32 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.970 _refine.pdbx_overall_ESU_R_Free 0.394 _refine.overall_SU_ML 0.276 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 15.382 _refine.overall_SU_R_Cruickshank_DPI 0.9697 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3792 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 16 _refine_hist.number_atoms_total 3860 _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 134.69 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 3934 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.117 1.952 ? 5327 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.777 5.000 ? 472 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.871 25.306 ? 196 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.010 15.000 ? 670 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.818 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.078 0.200 ? 572 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.021 ? 2990 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.401 1.500 ? 2362 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.780 2.000 ? 3808 'X-RAY DIFFRACTION' ? r_scbond_it 0.997 3.000 ? 1572 'X-RAY DIFFRACTION' ? r_scangle_it 1.714 4.500 ? 1519 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.102 _refine_ls_shell.d_res_low 3.182 _refine_ls_shell.number_reflns_R_work 1238 _refine_ls_shell.R_factor_R_work 0.281 _refine_ls_shell.percent_reflns_obs 97.53 _refine_ls_shell.R_factor_R_free 0.317 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3S12 _struct.title 'Crystal structure of H5N1 influenza virus hemagglutinin, strain YU562 crystal form 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S12 _struct_keywords.text 'hemagglutinin, viral protein, viral envelope protein, viral fusion protein' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP HEMA_I01A1 Q80A30 1 ;DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIV EKASPANDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYLGKSSFFRNVVWLIKKNSAYPTI KRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAIN FESNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNT PQR ; 6 ? 2 UNP HEMA_I01A1 Q80A30 2 ;GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYP QYSEEARLNREEISGV ; 336 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3S12 A 14 ? 336 ? Q80A30 6 ? 328 ? 11 326 2 2 3S12 B 1 ? 176 ? Q80A30 336 ? 511 ? 1 176 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S12 ASP A 1 ? UNP Q80A30 ? ? 'expression tag' -2 1 1 3S12 LEU A 2 ? UNP Q80A30 ? ? 'expression tag' -1 2 1 3S12 GLY A 3 ? UNP Q80A30 ? ? 'expression tag' 0 3 1 3S12 SER A 4 ? UNP Q80A30 ? ? 'expression tag' 1 4 1 3S12 MET A 5 ? UNP Q80A30 ? ? 'expression tag' 2 5 1 3S12 ALA A 6 ? UNP Q80A30 ? ? 'expression tag' 3 6 1 3S12 ASP A 7 ? UNP Q80A30 ? ? 'expression tag' 4 7 1 3S12 PRO A 8 ? UNP Q80A30 ? ? 'expression tag' 5 8 1 3S12 GLY A 9 ? UNP Q80A30 ? ? 'expression tag' 6 9 1 3S12 TYR A 10 ? UNP Q80A30 ? ? 'expression tag' 7 10 1 3S12 LEU A 11 ? UNP Q80A30 ? ? 'expression tag' 8 11 1 3S12 LEU A 12 ? UNP Q80A30 ? ? 'expression tag' 9 12 1 3S12 GLU A 13 ? UNP Q80A30 ? ? 'expression tag' 10 13 2 3S12 ARG B 177 ? UNP Q80A30 ? ? 'expression tag' 177 14 2 3S12 SER B 178 ? UNP Q80A30 ? ? 'expression tag' 178 15 2 3S12 LEU B 179 ? UNP Q80A30 ? ? 'expression tag' 179 16 2 3S12 VAL B 180 ? UNP Q80A30 ? ? 'expression tag' 180 17 2 3S12 PRO B 181 ? UNP Q80A30 ? ? 'expression tag' 181 18 2 3S12 ARG B 182 ? UNP Q80A30 ? ? 'expression tag' 182 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 32930 ? 1 MORE -219 ? 1 'SSA (A^2)' 60090 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 -56.2760000000 0.8660254038 -0.5000000000 0.0000000000 97.4728912467 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5000000000 0.8660254038 0.0000000000 -112.5520000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 69 ? GLY A 76 ? SER A 65 GLY A 72 1 ? 8 HELX_P HELX_P2 2 ASP A 110 ? SER A 119 ? ASP A 104 SER A 113 1 ? 10 HELX_P HELX_P3 3 PRO A 131 ? TRP A 135 ? PRO A 125 TRP A 127 5 ? 5 HELX_P HELX_P4 4 ASP A 196 ? GLN A 205 ? ASP A 187 GLN A 196 1 ? 10 HELX_P HELX_P5 5 ASP B 37 ? LYS B 58 ? ASP B 37 LYS B 58 1 ? 22 HELX_P HELX_P6 6 GLU B 74 ? ARG B 127 ? GLU B 74 ARG B 127 1 ? 54 HELX_P HELX_P7 7 ASP B 145 ? ASN B 154 ? ASP B 145 ASN B 154 1 ? 10 HELX_P HELX_P8 8 ASP B 158 ? SER B 163 ? ASP B 158 SER B 163 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 17 SG ? ? ? 1_555 B CYS 137 SG ? ? A CYS 14 B CYS 137 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf2 disulf ? ? A CYS 55 SG ? ? ? 1_555 A CYS 287 SG ? ? A CYS 52 A CYS 277 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf3 disulf ? ? A CYS 68 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 64 A CYS 76 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf4 disulf ? ? A CYS 103 SG ? ? ? 1_555 A CYS 148 SG ? ? A CYS 97 A CYS 139 1_555 ? ? ? ? ? ? ? 2.088 ? ? disulf5 disulf ? ? A CYS 291 SG ? ? ? 1_555 A CYS 315 SG ? ? A CYS 281 A CYS 305 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf6 disulf ? ? B CYS 144 SG ? ? ? 1_555 B CYS 148 SG ? ? B CYS 144 B CYS 148 1_555 ? ? ? ? ? ? ? 2.024 ? ? covale1 covale one ? A ASN 36 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 34 A NAG 329 1_555 ? ? ? ? ? ? ? 1.425 ? N-Glycosylation covale2 covale one ? A ASN 178 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 169 C NAG 1 1_555 ? ? ? ? ? ? ? 1.429 ? N-Glycosylation covale3 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG C . ? ASN A 178 ? NAG C 1 ? 1_555 ASN A 169 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG F . ? ASN A 36 ? NAG A 329 ? 1_555 ASN A 34 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS A 17 ? CYS B 137 ? CYS A 14 ? 1_555 CYS B 137 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 55 ? CYS A 287 ? CYS A 52 ? 1_555 CYS A 277 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 68 ? CYS A 80 ? CYS A 64 ? 1_555 CYS A 76 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 103 ? CYS A 148 ? CYS A 97 ? 1_555 CYS A 139 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 291 ? CYS A 315 ? CYS A 281 ? 1_555 CYS A 305 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS B 144 ? CYS B 148 ? CYS B 144 ? 1_555 CYS B 148 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? D ? 3 ? E ? 2 ? F ? 3 ? G ? 5 ? H ? 5 ? I ? 2 ? J ? 4 ? K ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? parallel D 2 3 ? parallel E 1 2 ? parallel F 1 2 ? parallel F 2 3 ? parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel H 4 5 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 32 ? ALA B 36 ? SER B 32 ALA B 36 A 2 TYR B 22 ? SER B 27 ? TYR B 22 SER B 27 A 3 GLN A 15 ? TYR A 20 ? GLN A 12 TYR A 17 A 4 CYS B 137 ? PHE B 140 ? CYS B 137 PHE B 140 A 5 ALA B 130 ? GLU B 132 ? ALA B 130 GLU B 132 B 1 GLN A 28 ? VAL A 29 ? GLN A 24 VAL A 25 B 2 VAL A 37 ? THR A 38 A VAL A 35 THR A 35 C 1 ALA A 42 ? ASP A 44 ? ALA A 39 ASP A 41 C 2 VAL A 325 ? ALA A 327 ? VAL A 315 ALA A 317 D 1 LEU A 46 ? GLU A 47 ? LEU A 43 GLU A 44 D 2 PHE A 304 ? HIS A 305 ? PHE A 294 HIS A 295 D 3 LYS A 317 ? TYR A 318 ? LYS A 307 TYR A 308 E 1 LEU A 54 ? LEU A 57 A LEU A 51 LEU A 53 E 2 TYR A 284 ? THR A 289 ? TYR A 274 THR A 279 F 1 LEU A 63 ? ILE A 64 ? LEU A 59 ILE A 60 F 2 ILE A 92 ? GLU A 94 ? ILE A 87 GLU A 89 F 3 ILE A 277 ? LYS A 279 ? ILE A 267 LYS A 269 G 1 GLY A 106 ? PHE A 108 ? GLY A 100 PHE A 102 G 2 ARG A 238 ? LEU A 246 ? ARG A 229 LEU A 237 G 3 ASP A 184 ? HIS A 193 ? ASP A 175 HIS A 184 G 4 TYR A 265 ? VAL A 270 ? TYR A 256 VAL A 261 G 5 HIS A 123 ? GLN A 128 ? HIS A 117 GLN A 122 H 1 GLY A 106 ? PHE A 108 ? GLY A 100 PHE A 102 H 2 ARG A 238 ? LEU A 246 ? ARG A 229 LEU A 237 H 3 ASP A 184 ? HIS A 193 ? ASP A 175 HIS A 184 H 4 PHE A 260 ? PRO A 263 ? PHE A 251 PRO A 254 H 5 VAL A 160 ? TRP A 162 ? VAL A 151 TRP A 153 I 1 SER A 145 ? TYR A 150 ? SER A 136 TYR A 141 I 2 LYS A 153 ? SER A 155 ? LYS A 144 SER A 146 J 1 ILE A 173 ? ASN A 178 ? ILE A 164 ASN A 169 J 2 ALA A 251 ? SER A 256 ? ALA A 242 SER A 247 J 3 ILE A 211 ? GLY A 214 ? ILE A 202 GLY A 205 J 4 ASN A 219 ? LEU A 222 ? ASN A 210 LEU A 213 K 1 CYS A 291 ? GLN A 292 ? CYS A 281 GLN A 282 K 2 ILE A 312 ? GLY A 313 ? ILE A 302 GLY A 303 K 3 GLU B 64 ? ALA B 65 ? GLU B 64 ALA B 65 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA B 35 ? O ALA B 35 N TYR B 24 ? N TYR B 24 A 2 3 O GLY B 23 ? O GLY B 23 N GLY A 19 ? N GLY A 16 A 3 4 N ILE A 16 ? N ILE A 13 O PHE B 138 ? O PHE B 138 A 4 5 O GLU B 139 ? O GLU B 139 N LYS B 131 ? N LYS B 131 B 1 2 N VAL A 29 ? N VAL A 25 O VAL A 37 ? O VAL A 35 C 1 2 N GLN A 43 ? N GLN A 40 O LEU A 326 ? O LEU A 316 D 1 2 N GLU A 47 ? N GLU A 44 O PHE A 304 ? O PHE A 294 D 2 3 N HIS A 305 ? N HIS A 295 O LYS A 317 ? O LYS A 307 E 1 2 N ASP A 56 ? N ASP A 53 O CYS A 287 ? O CYS A 277 F 1 2 N LEU A 63 ? N LEU A 59 O VAL A 93 ? O VAL A 88 F 2 3 N ILE A 92 ? N ILE A 87 O MET A 278 ? O MET A 268 G 1 2 N ASP A 107 ? N ASP A 101 O PHE A 241 ? O PHE A 232 G 2 3 O ARG A 238 ? O ARG A 229 N HIS A 193 ? N HIS A 184 G 3 4 N ASP A 184 ? N ASP A 175 O ILE A 269 ? O ILE A 260 G 4 5 O LYS A 268 ? O LYS A 259 N GLU A 125 ? N GLU A 119 H 1 2 N ASP A 107 ? N ASP A 101 O PHE A 241 ? O PHE A 232 H 2 3 O ARG A 238 ? O ARG A 229 N HIS A 193 ? N HIS A 184 H 3 4 N GLY A 190 ? N GLY A 181 O ILE A 261 ? O ILE A 252 H 4 5 O ALA A 262 ? O ALA A 253 N VAL A 161 ? N VAL A 152 I 1 2 N TYR A 150 ? N TYR A 141 O LYS A 153 ? O LYS A 144 J 1 2 N ILE A 173 ? N ILE A 164 O SER A 256 ? O SER A 247 J 2 3 O GLU A 255 ? O GLU A 246 N SER A 212 ? N SER A 203 J 3 4 N ILE A 211 ? N ILE A 202 O LEU A 222 ? O LEU A 213 K 1 2 N GLN A 292 ? N GLN A 282 O ILE A 312 ? O ILE A 302 K 2 3 N GLY A 313 ? N GLY A 303 O GLU B 64 ? O GLU B 64 # _pdbx_entry_details.entry_id 3S12 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 31 ? ? -134.45 -39.99 2 1 ASP A 63 ? ? -144.03 24.86 3 1 ASP A 96 ? ? -120.95 -90.85 4 1 CYS A 139 ? ? -118.87 65.77 5 1 SER A 146 ? ? -139.40 -158.26 6 1 PHE A 148 ? ? -37.19 125.16 7 1 GLN A 196 ? ? 67.38 -58.98 8 1 THR A 206 ? ? -119.69 -157.27 9 1 ASN A 240 ? ? 80.64 -7.80 10 1 ASN A 250 ? ? 58.00 10.73 11 1 LYS A 263 ? ? -109.22 -88.19 12 1 SER A 265 ? ? -162.49 -161.51 13 1 LEU A 272 ? ? -68.96 -179.97 14 1 LYS A 310 ? ? -86.58 35.52 15 1 ASN A 322 ? ? -105.19 -168.90 16 1 ASN B 28 ? ? -110.96 -154.92 17 1 ARG B 127 ? ? 52.65 -128.99 18 1 PRO B 160 ? ? -65.54 29.30 19 1 GLN B 161 ? ? -127.86 -61.01 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 36 A ASN 34 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 178 A ASN 169 ? ASN 'GLYCOSYLATION SITE' # _pdbx_phasing_MR.entry_id 3S12 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 40.610 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.100 _pdbx_phasing_MR.d_res_low_rotation 48.740 _pdbx_phasing_MR.d_res_high_translation 3.100 _pdbx_phasing_MR.d_res_low_translation 48.740 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP -2 ? A ASP 1 2 1 Y 1 A LEU -1 ? A LEU 2 3 1 Y 1 A GLY 0 ? A GLY 3 4 1 Y 1 A SER 1 ? A SER 4 5 1 Y 1 A MET 2 ? A MET 5 6 1 Y 1 A ALA 3 ? A ALA 6 7 1 Y 1 A ASP 4 ? A ASP 7 8 1 Y 1 A PRO 5 ? A PRO 8 9 1 Y 1 A GLY 6 ? A GLY 9 10 1 Y 1 A TYR 7 ? A TYR 10 11 1 Y 1 A LEU 8 ? A LEU 11 12 1 Y 1 A LEU 9 ? A LEU 12 13 1 Y 1 A GLU 78 ? A GLU 82 14 1 Y 1 A PHE 79 ? A PHE 83 15 1 Y 1 A ILE 80 ? A ILE 84 16 1 Y 1 A PRO 324 ? A PRO 334 17 1 Y 1 A GLN 325 ? A GLN 335 18 1 Y 1 A ARG 326 ? A ARG 336 19 1 Y 1 B GLY 1 ? B GLY 1 20 1 Y 1 B LEU 2 ? B LEU 2 21 1 Y 1 B PHE 3 ? B PHE 3 22 1 Y 1 B GLY 4 ? B GLY 4 23 1 Y 1 B ALA 5 ? B ALA 5 24 1 Y 1 B ILE 6 ? B ILE 6 25 1 Y 1 B ALA 7 ? B ALA 7 26 1 Y 1 B GLY 8 ? B GLY 8 27 1 Y 1 B PHE 9 ? B PHE 9 28 1 Y 1 B LEU 168 ? B LEU 168 29 1 Y 1 B ASN 169 ? B ASN 169 30 1 Y 1 B ARG 170 ? B ARG 170 31 1 Y 1 B GLU 171 ? B GLU 171 32 1 Y 1 B GLU 172 ? B GLU 172 33 1 Y 1 B ILE 173 ? B ILE 173 34 1 Y 1 B SER 174 ? B SER 174 35 1 Y 1 B GLY 175 ? B GLY 175 36 1 Y 1 B VAL 176 ? B VAL 176 37 1 Y 1 B ARG 177 ? B ARG 177 38 1 Y 1 B SER 178 ? B SER 178 39 1 Y 1 B LEU 179 ? B LEU 179 40 1 Y 1 B VAL 180 ? B VAL 180 41 1 Y 1 B PRO 181 ? B PRO 181 42 1 Y 1 B ARG 182 ? B ARG 182 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NAG C1 C N R 250 NAG C2 C N R 251 NAG C3 C N R 252 NAG C4 C N S 253 NAG C5 C N R 254 NAG C6 C N N 255 NAG C7 C N N 256 NAG C8 C N N 257 NAG N2 N N N 258 NAG O1 O N N 259 NAG O3 O N N 260 NAG O4 O N N 261 NAG O5 O N N 262 NAG O6 O N N 263 NAG O7 O N N 264 NAG H1 H N N 265 NAG H2 H N N 266 NAG H3 H N N 267 NAG H4 H N N 268 NAG H5 H N N 269 NAG H61 H N N 270 NAG H62 H N N 271 NAG H81 H N N 272 NAG H82 H N N 273 NAG H83 H N N 274 NAG HN2 H N N 275 NAG HO1 H N N 276 NAG HO3 H N N 277 NAG HO4 H N N 278 NAG HO6 H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 SO4 S S N N 334 SO4 O1 O N N 335 SO4 O2 O N N 336 SO4 O3 O N N 337 SO4 O4 O N N 338 THR N N N N 339 THR CA C N S 340 THR C C N N 341 THR O O N N 342 THR CB C N R 343 THR OG1 O N N 344 THR CG2 C N N 345 THR OXT O N N 346 THR H H N N 347 THR H2 H N N 348 THR HA H N N 349 THR HB H N N 350 THR HG1 H N N 351 THR HG21 H N N 352 THR HG22 H N N 353 THR HG23 H N N 354 THR HXT H N N 355 TRP N N N N 356 TRP CA C N S 357 TRP C C N N 358 TRP O O N N 359 TRP CB C N N 360 TRP CG C Y N 361 TRP CD1 C Y N 362 TRP CD2 C Y N 363 TRP NE1 N Y N 364 TRP CE2 C Y N 365 TRP CE3 C Y N 366 TRP CZ2 C Y N 367 TRP CZ3 C Y N 368 TRP CH2 C Y N 369 TRP OXT O N N 370 TRP H H N N 371 TRP H2 H N N 372 TRP HA H N N 373 TRP HB2 H N N 374 TRP HB3 H N N 375 TRP HD1 H N N 376 TRP HE1 H N N 377 TRP HE3 H N N 378 TRP HZ2 H N N 379 TRP HZ3 H N N 380 TRP HH2 H N N 381 TRP HXT H N N 382 TYR N N N N 383 TYR CA C N S 384 TYR C C N N 385 TYR O O N N 386 TYR CB C N N 387 TYR CG C Y N 388 TYR CD1 C Y N 389 TYR CD2 C Y N 390 TYR CE1 C Y N 391 TYR CE2 C Y N 392 TYR CZ C Y N 393 TYR OH O N N 394 TYR OXT O N N 395 TYR H H N N 396 TYR H2 H N N 397 TYR HA H N N 398 TYR HB2 H N N 399 TYR HB3 H N N 400 TYR HD1 H N N 401 TYR HD2 H N N 402 TYR HE1 H N N 403 TYR HE2 H N N 404 TYR HH H N N 405 TYR HXT H N N 406 VAL N N N N 407 VAL CA C N S 408 VAL C C N N 409 VAL O O N N 410 VAL CB C N N 411 VAL CG1 C N N 412 VAL CG2 C N N 413 VAL OXT O N N 414 VAL H H N N 415 VAL H2 H N N 416 VAL HA H N N 417 VAL HB H N N 418 VAL HG11 H N N 419 VAL HG12 H N N 420 VAL HG13 H N N 421 VAL HG21 H N N 422 VAL HG22 H N N 423 VAL HG23 H N N 424 VAL HXT H N N 425 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 SO4 S O1 doub N N 320 SO4 S O2 doub N N 321 SO4 S O3 sing N N 322 SO4 S O4 sing N N 323 THR N CA sing N N 324 THR N H sing N N 325 THR N H2 sing N N 326 THR CA C sing N N 327 THR CA CB sing N N 328 THR CA HA sing N N 329 THR C O doub N N 330 THR C OXT sing N N 331 THR CB OG1 sing N N 332 THR CB CG2 sing N N 333 THR CB HB sing N N 334 THR OG1 HG1 sing N N 335 THR CG2 HG21 sing N N 336 THR CG2 HG22 sing N N 337 THR CG2 HG23 sing N N 338 THR OXT HXT sing N N 339 TRP N CA sing N N 340 TRP N H sing N N 341 TRP N H2 sing N N 342 TRP CA C sing N N 343 TRP CA CB sing N N 344 TRP CA HA sing N N 345 TRP C O doub N N 346 TRP C OXT sing N N 347 TRP CB CG sing N N 348 TRP CB HB2 sing N N 349 TRP CB HB3 sing N N 350 TRP CG CD1 doub Y N 351 TRP CG CD2 sing Y N 352 TRP CD1 NE1 sing Y N 353 TRP CD1 HD1 sing N N 354 TRP CD2 CE2 doub Y N 355 TRP CD2 CE3 sing Y N 356 TRP NE1 CE2 sing Y N 357 TRP NE1 HE1 sing N N 358 TRP CE2 CZ2 sing Y N 359 TRP CE3 CZ3 doub Y N 360 TRP CE3 HE3 sing N N 361 TRP CZ2 CH2 doub Y N 362 TRP CZ2 HZ2 sing N N 363 TRP CZ3 CH2 sing Y N 364 TRP CZ3 HZ3 sing N N 365 TRP CH2 HH2 sing N N 366 TRP OXT HXT sing N N 367 TYR N CA sing N N 368 TYR N H sing N N 369 TYR N H2 sing N N 370 TYR CA C sing N N 371 TYR CA CB sing N N 372 TYR CA HA sing N N 373 TYR C O doub N N 374 TYR C OXT sing N N 375 TYR CB CG sing N N 376 TYR CB HB2 sing N N 377 TYR CB HB3 sing N N 378 TYR CG CD1 doub Y N 379 TYR CG CD2 sing Y N 380 TYR CD1 CE1 sing Y N 381 TYR CD1 HD1 sing N N 382 TYR CD2 CE2 doub Y N 383 TYR CD2 HD2 sing N N 384 TYR CE1 CZ doub Y N 385 TYR CE1 HE1 sing N N 386 TYR CE2 CZ sing Y N 387 TYR CE2 HE2 sing N N 388 TYR CZ OH sing N N 389 TYR OH HH sing N N 390 TYR OXT HXT sing N N 391 VAL N CA sing N N 392 VAL N H sing N N 393 VAL N H2 sing N N 394 VAL CA C sing N N 395 VAL CA CB sing N N 396 VAL CA HA sing N N 397 VAL C O doub N N 398 VAL C OXT sing N N 399 VAL CB CG1 sing N N 400 VAL CB CG2 sing N N 401 VAL CB HB sing N N 402 VAL CG1 HG11 sing N N 403 VAL CG1 HG12 sing N N 404 VAL CG1 HG13 sing N N 405 VAL CG2 HG21 sing N N 406 VAL CG2 HG22 sing N N 407 VAL CG2 HG23 sing N N 408 VAL OXT HXT sing N N 409 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n # _atom_sites.entry_id 3S12 _atom_sites.fract_transf_matrix[1][1] 0.008885 _atom_sites.fract_transf_matrix[1][2] 0.005130 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010259 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007425 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_