data_3S1B # _entry.id 3S1B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3S1B RCSB RCSB065635 WWPDB D_1000065635 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3S1K _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3S1B _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-14 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Murray, J.M.' 1 'Wiesmann, C.' 2 # _citation.id primary _citation.title 'The development of Peptide-based tools for the analysis of angiogenesis.' _citation.journal_abbrev Chem.Biol. _citation.journal_volume 18 _citation.page_first 839 _citation.page_last 845 _citation.year 2011 _citation.journal_id_ASTM CBOLE2 _citation.country UK _citation.journal_id_ISSN 1074-5521 _citation.journal_id_CSD 2050 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21802005 _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2011.05.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fedorova, A.' 1 primary 'Zobel, K.' 2 primary 'Gill, H.S.' 3 primary 'Ogasawara, A.' 4 primary 'Flores, J.E.' 5 primary 'Tinianow, J.N.' 6 primary 'Vanderbilt, A.N.' 7 primary 'Wu, P.' 8 primary 'Meng, Y.G.' 9 primary 'Williams, S.P.' 10 primary 'Wiesmann, C.' 11 primary 'Murray, J.' 12 primary 'Marik, J.' 13 primary 'Deshayes, K.' 14 # _cell.length_a 70.940 _cell.length_b 70.940 _cell.length_c 161.288 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3S1B _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.entry_id 3S1B _symmetry.Int_Tables_number 179 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vascular endothelial growth factor A' 11266.981 1 ? ? ? ? 2 polymer syn mini-Z 3990.585 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'VEGF-A, Vascular permeability factor, VPF' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHI GEMSFLQHNKCECRPK ; ;HEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHI GEMSFLQHNKCECRPK ; V ? 2 'polypeptide(L)' no no FNKECLLRYKEAALDPNLNLYQRIAKIVSIDDDC FNKECLLRYKEAALDPNLNLYQRIAKIVSIDDDC A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 GLU n 1 3 VAL n 1 4 VAL n 1 5 LYS n 1 6 PHE n 1 7 MET n 1 8 ASP n 1 9 VAL n 1 10 TYR n 1 11 GLN n 1 12 ARG n 1 13 SER n 1 14 TYR n 1 15 CYS n 1 16 HIS n 1 17 PRO n 1 18 ILE n 1 19 GLU n 1 20 THR n 1 21 LEU n 1 22 VAL n 1 23 ASP n 1 24 ILE n 1 25 PHE n 1 26 GLN n 1 27 GLU n 1 28 TYR n 1 29 PRO n 1 30 ASP n 1 31 GLU n 1 32 ILE n 1 33 GLU n 1 34 TYR n 1 35 ILE n 1 36 PHE n 1 37 LYS n 1 38 PRO n 1 39 SER n 1 40 CYS n 1 41 VAL n 1 42 PRO n 1 43 LEU n 1 44 MET n 1 45 ARG n 1 46 CYS n 1 47 GLY n 1 48 GLY n 1 49 CYS n 1 50 CYS n 1 51 ASN n 1 52 ASP n 1 53 GLU n 1 54 GLY n 1 55 LEU n 1 56 GLU n 1 57 CYS n 1 58 VAL n 1 59 PRO n 1 60 THR n 1 61 GLU n 1 62 GLU n 1 63 SER n 1 64 ASN n 1 65 ILE n 1 66 THR n 1 67 MET n 1 68 GLN n 1 69 ILE n 1 70 MET n 1 71 ARG n 1 72 ILE n 1 73 LYS n 1 74 PRO n 1 75 HIS n 1 76 GLN n 1 77 GLY n 1 78 GLN n 1 79 HIS n 1 80 ILE n 1 81 GLY n 1 82 GLU n 1 83 MET n 1 84 SER n 1 85 PHE n 1 86 LEU n 1 87 GLN n 1 88 HIS n 1 89 ASN n 1 90 LYS n 1 91 CYS n 1 92 GLU n 1 93 CYS n 1 94 ARG n 1 95 PRO n 1 96 LYS n 2 1 PHE n 2 2 ASN n 2 3 LYS n 2 4 GLU n 2 5 CYS n 2 6 LEU n 2 7 LEU n 2 8 ARG n 2 9 TYR n 2 10 LYS n 2 11 GLU n 2 12 ALA n 2 13 ALA n 2 14 LEU n 2 15 ASP n 2 16 PRO n 2 17 ASN n 2 18 LEU n 2 19 ASN n 2 20 LEU n 2 21 TYR n 2 22 GLN n 2 23 ARG n 2 24 ILE n 2 25 ALA n 2 26 LYS n 2 27 ILE n 2 28 VAL n 2 29 SER n 2 30 ILE n 2 31 ASP n 2 32 ASP n 2 33 ASP n 2 34 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'VEGF, VEGFA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'fmoc solid-phase peptide synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP VEGFA_HUMAN P15692 1 ;HEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHI GEMSFLQHNKCECRPK ; 38 ? 2 PDB 3S1B 3S1B 2 FNKECLLRYKEAALDPNLNLYQRIAKIVSIDDDC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3S1B V 1 ? 96 ? P15692 38 ? 133 ? 12 107 2 2 3S1B A 1 ? 34 ? 3S1B 1 ? 34 ? 1 34 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3S1B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.84 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 67.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details '0.1 M NaOAc, 0.02 M CaCl2, MPD 30.0% v/v, pH 6.0, vapor diffusion, hanging drop, temperature 289K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 ? ? 1 2 ? ? 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-04-10 _diffrn_detector.details ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.monochromator _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type 1 SINGLE ? 1 ? x-ray 2 SINGLE ? 1 ? x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 # _reflns.entry_id 3S1B _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 20 _reflns.number_all ? _reflns.number_obs 6381 _reflns.percent_possible_obs 98 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.079 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _refine.entry_id 3S1B _refine.ls_d_res_high 2.9000 _refine.ls_d_res_low 20 _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.6400 _refine.ls_number_reflns_obs 5733 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2224 _refine.ls_R_factor_R_work 0.2207 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2506 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.7400 _refine.ls_number_reflns_R_free 272 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 65.6861 _refine.solvent_model_param_bsol 19.4740 _refine.solvent_model_param_ksol 0.2900 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 9.5493 _refine.aniso_B[2][2] 9.5493 _refine.aniso_B[3][3] -19.0986 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3500 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7200 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7801 _refine.B_iso_max 198.070 _refine.B_iso_min 26.280 _refine.pdbx_overall_phase_error 26.3700 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1,2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1058 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1058 _refine_hist.d_res_high 2.9000 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1084 0.007 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1455 0.989 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 155 0.053 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 192 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 420 17.699 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.9001 3.6534 2 98.0000 2632 . 0.2663 0.3303 . 130 . 2762 . . 'X-RAY DIFFRACTION' 3.6534 40.4624 2 99.0000 2829 . 0.2023 0.2221 . 142 . 2971 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3S1B _struct.title 'The Development of Peptide-based Tools for the Analysis of Angiogenesis' _struct.pdbx_descriptor 'Vascular endothelial growth factor A, mini-Z' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S1B _struct_keywords.text 'VEGF, cystine knot, mini-Z, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 5 ? TYR A 14 ? LYS V 16 TYR V 25 1 ? 10 HELX_P HELX_P2 2 ILE A 24 ? TYR A 28 ? ILE V 35 TYR V 39 1 ? 5 HELX_P HELX_P3 3 ASN B 2 ? ASP B 15 ? ASN A 2 ASP A 15 1 ? 14 HELX_P HELX_P4 4 ASN B 19 ? CYS B 34 ? ASN A 19 CYS A 34 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 15 SG ? ? ? 1_555 A CYS 57 SG ? ? V CYS 26 V CYS 68 1_555 ? ? ? ? ? ? ? 2.050 ? disulf2 disulf ? ? A CYS 46 SG ? ? ? 1_555 A CYS 91 SG ? ? V CYS 57 V CYS 102 1_555 ? ? ? ? ? ? ? 2.056 ? disulf3 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 93 SG ? ? V CYS 61 V CYS 104 1_555 ? ? ? ? ? ? ? 2.055 ? disulf4 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 34 SG ? ? A CYS 5 A CYS 34 1_555 ? ? ? ? ? ? ? 1.870 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 37 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 48 _struct_mon_prot_cis.auth_asym_id V _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 38 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 49 _struct_mon_prot_cis.pdbx_auth_asym_id_2 V _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.30 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 16 ? ASP A 23 ? HIS V 27 ASP V 34 A 2 CYS A 40 ? GLY A 47 ? CYS V 51 GLY V 58 B 1 ILE A 35 ? LYS A 37 ? ILE V 46 LYS V 48 B 2 LEU A 55 ? ILE A 72 ? LEU V 66 ILE V 83 B 3 GLN A 78 ? PRO A 95 ? GLN V 89 PRO V 106 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 20 ? N THR V 31 O LEU A 43 ? O LEU V 54 B 1 2 N ILE A 35 ? N ILE V 46 O ILE A 72 ? O ILE V 83 B 2 3 N SER A 63 ? N SER V 74 O GLN A 87 ? O GLN V 98 # _atom_sites.entry_id 3S1B _atom_sites.fract_transf_matrix[1][1] 0.014096 _atom_sites.fract_transf_matrix[1][2] 0.008139 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016277 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006200 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 12 12 HIS HIS V . n A 1 2 GLU 2 13 13 GLU GLU V . n A 1 3 VAL 3 14 14 VAL VAL V . n A 1 4 VAL 4 15 15 VAL VAL V . n A 1 5 LYS 5 16 16 LYS LYS V . n A 1 6 PHE 6 17 17 PHE PHE V . n A 1 7 MET 7 18 18 MET MET V . n A 1 8 ASP 8 19 19 ASP ASP V . n A 1 9 VAL 9 20 20 VAL VAL V . n A 1 10 TYR 10 21 21 TYR TYR V . n A 1 11 GLN 11 22 22 GLN GLN V . n A 1 12 ARG 12 23 23 ARG ARG V . n A 1 13 SER 13 24 24 SER SER V . n A 1 14 TYR 14 25 25 TYR TYR V . n A 1 15 CYS 15 26 26 CYS CYS V . n A 1 16 HIS 16 27 27 HIS HIS V . n A 1 17 PRO 17 28 28 PRO PRO V . n A 1 18 ILE 18 29 29 ILE ILE V . n A 1 19 GLU 19 30 30 GLU GLU V . n A 1 20 THR 20 31 31 THR THR V . n A 1 21 LEU 21 32 32 LEU LEU V . n A 1 22 VAL 22 33 33 VAL VAL V . n A 1 23 ASP 23 34 34 ASP ASP V . n A 1 24 ILE 24 35 35 ILE ILE V . n A 1 25 PHE 25 36 36 PHE PHE V . n A 1 26 GLN 26 37 37 GLN GLN V . n A 1 27 GLU 27 38 38 GLU GLU V . n A 1 28 TYR 28 39 39 TYR TYR V . n A 1 29 PRO 29 40 40 PRO PRO V . n A 1 30 ASP 30 41 41 ASP ASP V . n A 1 31 GLU 31 42 42 GLU GLU V . n A 1 32 ILE 32 43 43 ILE ILE V . n A 1 33 GLU 33 44 44 GLU GLU V . n A 1 34 TYR 34 45 45 TYR TYR V . n A 1 35 ILE 35 46 46 ILE ILE V . n A 1 36 PHE 36 47 47 PHE PHE V . n A 1 37 LYS 37 48 48 LYS LYS V . n A 1 38 PRO 38 49 49 PRO PRO V . n A 1 39 SER 39 50 50 SER SER V . n A 1 40 CYS 40 51 51 CYS CYS V . n A 1 41 VAL 41 52 52 VAL VAL V . n A 1 42 PRO 42 53 53 PRO PRO V . n A 1 43 LEU 43 54 54 LEU LEU V . n A 1 44 MET 44 55 55 MET MET V . n A 1 45 ARG 45 56 56 ARG ARG V . n A 1 46 CYS 46 57 57 CYS CYS V . n A 1 47 GLY 47 58 58 GLY GLY V . n A 1 48 GLY 48 59 59 GLY GLY V . n A 1 49 CYS 49 60 60 CYS CYS V . n A 1 50 CYS 50 61 61 CYS CYS V . n A 1 51 ASN 51 62 62 ASN ASN V . n A 1 52 ASP 52 63 63 ASP ASP V . n A 1 53 GLU 53 64 64 GLU GLU V . n A 1 54 GLY 54 65 65 GLY GLY V . n A 1 55 LEU 55 66 66 LEU LEU V . n A 1 56 GLU 56 67 67 GLU GLU V . n A 1 57 CYS 57 68 68 CYS CYS V . n A 1 58 VAL 58 69 69 VAL VAL V . n A 1 59 PRO 59 70 70 PRO PRO V . n A 1 60 THR 60 71 71 THR THR V . n A 1 61 GLU 61 72 72 GLU GLU V . n A 1 62 GLU 62 73 73 GLU GLU V . n A 1 63 SER 63 74 74 SER SER V . n A 1 64 ASN 64 75 75 ASN ASN V . n A 1 65 ILE 65 76 76 ILE ILE V . n A 1 66 THR 66 77 77 THR THR V . n A 1 67 MET 67 78 78 MET MET V . n A 1 68 GLN 68 79 79 GLN GLN V . n A 1 69 ILE 69 80 80 ILE ILE V . n A 1 70 MET 70 81 81 MET MET V . n A 1 71 ARG 71 82 82 ARG ARG V . n A 1 72 ILE 72 83 83 ILE ILE V . n A 1 73 LYS 73 84 84 LYS LYS V . n A 1 74 PRO 74 85 85 PRO PRO V . n A 1 75 HIS 75 86 86 HIS HIS V . n A 1 76 GLN 76 87 87 GLN GLN V . n A 1 77 GLY 77 88 88 GLY GLY V . n A 1 78 GLN 78 89 89 GLN GLN V . n A 1 79 HIS 79 90 90 HIS HIS V . n A 1 80 ILE 80 91 91 ILE ILE V . n A 1 81 GLY 81 92 92 GLY GLY V . n A 1 82 GLU 82 93 93 GLU GLU V . n A 1 83 MET 83 94 94 MET MET V . n A 1 84 SER 84 95 95 SER SER V . n A 1 85 PHE 85 96 96 PHE PHE V . n A 1 86 LEU 86 97 97 LEU LEU V . n A 1 87 GLN 87 98 98 GLN GLN V . n A 1 88 HIS 88 99 99 HIS HIS V . n A 1 89 ASN 89 100 100 ASN ASN V . n A 1 90 LYS 90 101 101 LYS LYS V . n A 1 91 CYS 91 102 102 CYS CYS V . n A 1 92 GLU 92 103 103 GLU GLU V . n A 1 93 CYS 93 104 104 CYS CYS V . n A 1 94 ARG 94 105 105 ARG ARG V . n A 1 95 PRO 95 106 106 PRO PRO V . n A 1 96 LYS 96 107 107 LYS LYS V . n B 2 1 PHE 1 1 1 PHE PHE A . n B 2 2 ASN 2 2 2 ASN ASN A . n B 2 3 LYS 3 3 3 LYS LYS A . n B 2 4 GLU 4 4 4 GLU GLU A . n B 2 5 CYS 5 5 5 CYS CYS A . n B 2 6 LEU 6 6 6 LEU LEU A . n B 2 7 LEU 7 7 7 LEU LEU A . n B 2 8 ARG 8 8 8 ARG ARG A . n B 2 9 TYR 9 9 9 TYR TYR A . n B 2 10 LYS 10 10 10 LYS LYS A . n B 2 11 GLU 11 11 11 GLU GLU A . n B 2 12 ALA 12 12 12 ALA ALA A . n B 2 13 ALA 13 13 13 ALA ALA A . n B 2 14 LEU 14 14 14 LEU LEU A . n B 2 15 ASP 15 15 15 ASP ASP A . n B 2 16 PRO 16 16 16 PRO PRO A . n B 2 17 ASN 17 17 17 ASN ASN A . n B 2 18 LEU 18 18 18 LEU LEU A . n B 2 19 ASN 19 19 19 ASN ASN A . n B 2 20 LEU 20 20 20 LEU LEU A . n B 2 21 TYR 21 21 21 TYR TYR A . n B 2 22 GLN 22 22 22 GLN GLN A . n B 2 23 ARG 23 23 23 ARG ARG A . n B 2 24 ILE 24 24 24 ILE ILE A . n B 2 25 ALA 25 25 25 ALA ALA A . n B 2 26 LYS 26 26 26 LYS LYS A . n B 2 27 ILE 27 27 27 ILE ILE A . n B 2 28 VAL 28 28 28 VAL VAL A . n B 2 29 SER 29 29 29 SER SER A . n B 2 30 ILE 30 30 30 ILE ILE A . n B 2 31 ASP 31 31 31 ASP ASP A . n B 2 32 ASP 32 32 32 ASP ASP A . n B 2 33 ASP 33 33 33 ASP ASP A . n B 2 34 CYS 34 34 34 CYS CYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4370 ? 1 MORE -39 ? 1 'SSA (A^2)' 15280 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2011-08-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.800 _diffrn_reflns.pdbx_d_res_low 20.000 _diffrn_reflns.pdbx_number_obs 6381 _diffrn_reflns.pdbx_Rmerge_I_obs 0.115 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.00 _diffrn_reflns.av_sigmaI_over_netI ? _diffrn_reflns.pdbx_redundancy 6.00 _diffrn_reflns.pdbx_percent_possible_obs 98.40 _diffrn_reflns.number 38151 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.98 20.00 ? ? 0.047 ? 0.771 5.60 98.50 1 4.77 5.98 ? ? 0.073 ? 0.891 5.80 97.90 1 4.17 4.77 ? ? 0.082 ? 1.162 6.10 98.50 1 3.79 4.17 ? ? 0.123 ? 1.122 6.10 99.10 1 3.52 3.79 ? ? 0.153 ? 1.233 6.30 99.10 1 3.32 3.52 ? ? 0.212 ? 1.082 6.30 98.60 1 3.15 3.32 ? ? 0.289 ? 1.022 6.30 98.20 1 3.02 3.15 ? ? 0.405 ? 0.905 6.30 98.60 1 2.90 3.02 ? ? 0.554 ? 0.847 5.90 98.70 1 2.80 2.90 ? ? 0.766 ? 0.944 5.10 96.90 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -27.5777 -25.0339 18.9170 0.3710 0.2418 0.2898 -0.1472 0.0018 -0.0128 0.1198 0.0914 0.0650 0.1067 -0.0904 -0.0859 0.2320 -0.2272 -0.0000 -0.1491 0.5864 0.2742 0.0218 -0.1566 -0.0764 'X-RAY DIFFRACTION' 2 ? refined -24.2476 3.6399 7.1739 0.2430 0.2534 0.2237 -0.0192 -0.0162 -0.0603 0.5757 1.5960 0.5580 0.6167 -0.0777 0.1953 0.1478 -0.1868 -0.0000 -0.0484 0.1450 -0.0010 0.2831 -0.4360 0.2196 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 34 'chain A and resid 1:34' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 V 13 V 107 'chain V and resid 13:107' ? ? ? ? ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX 1.6.4_486 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 6 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 CD2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 LEU _pdbx_validate_symm_contact.auth_seq_id_1 6 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 CD2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 LEU _pdbx_validate_symm_contact.auth_seq_id_2 6 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 10_445 _pdbx_validate_symm_contact.dist 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASN _pdbx_validate_rmsd_angle.auth_seq_id_1 19 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASN _pdbx_validate_rmsd_angle.auth_seq_id_2 19 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CB _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASN _pdbx_validate_rmsd_angle.auth_seq_id_3 19 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 90.31 _pdbx_validate_rmsd_angle.angle_target_value 110.60 _pdbx_validate_rmsd_angle.angle_deviation -20.29 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.80 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU V 13 ? ? -85.52 44.79 2 1 CYS V 26 ? ? -29.36 114.89 3 1 TYR V 39 ? ? -119.00 69.85 4 1 GLU V 44 ? ? -98.59 38.72 5 1 ASP V 63 ? ? -174.06 135.70 6 1 ASN A 2 ? ? 77.16 -57.69 7 1 ASN A 19 ? ? -111.75 -168.88 #